AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002809.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002809.01.T01 MTR_1g053160 89.945 547 5 3 1 547 1 497 0.0 995
MsG0180002809.01.T01 MTR_5g024900 52.050 317 146 3 121 431 54 370 2.60e-105 322
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002809.01.T01 AT2G41680 73.028 545 111 5 3 547 4 512 0.0 805
MsG0180002809.01.T01 AT2G17420 52.244 312 143 3 121 426 61 372 2.34e-112 340
MsG0180002809.01.T01 AT2G17420 51.827 301 139 3 121 415 61 361 1.60e-106 324
MsG0180002809.01.T01 AT4G35460 51.603 312 145 3 121 426 53 364 2.57e-102 314

Find 139 sgRNAs with CRISPR-Local

Find 448 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGCTGCTTCTGCTATTTC+TGG 0.025232 1:+45636776 None:intergenic
TACCAAATGGGTGGTGTTCC+TGG 0.167134 1:-45642722 MsG0180002809.01.T01:CDS
TTCTTAACCTCTTCATGTTT+TGG 0.188984 1:+45638005 None:intergenic
CCTTTCAACAGTTGAGTATT+TGG 0.222014 1:+45640266 None:intergenic
TCACTGCTTTGGACAGTAAA+AGG 0.234446 1:+45642447 None:intergenic
ATAATATTCATTAAGATATA+TGG 0.241217 1:-45636659 MsG0180002809.01.T01:CDS
AGAGAACTTTCCAGGATTTC+CGG 0.266594 1:-45642672 MsG0180002809.01.T01:CDS
GTTGAAAATGTGGTAATTAT+AGG 0.272616 1:-45642818 MsG0180002809.01.T01:CDS
TACCCAGAGAAGATGAATTT+TGG 0.278431 1:-45641984 MsG0180002809.01.T01:CDS
GAACACTACGGGTTTCAAAT+TGG 0.296172 1:+45642751 None:intergenic
GGATTTCCGGACGGGATTAC+TGG 0.307182 1:-45642659 MsG0180002809.01.T01:CDS
ACTGAAGTAGAGAACTTTCC+AGG 0.334671 1:-45642680 MsG0180002809.01.T01:CDS
GCTCCAAAATTCATCTTCTC+TGG 0.339217 1:+45641981 None:intergenic
TCACCTTACGTTCACTGCTT+TGG 0.363162 1:+45642436 None:intergenic
GCCGTAACTGCTGCTGGATC+TGG 0.371625 1:-45638847 MsG0180002809.01.T01:CDS
CAAATTCTTGCTGTCGTTGG+AGG 0.382585 1:-45641904 MsG0180002809.01.T01:CDS
CTTCTAAAGCCATGCAAGAT+AGG 0.400979 1:-45641795 MsG0180002809.01.T01:intron
GCGACGGCAAGCTGAACGTT+GGG 0.406078 1:-45642520 MsG0180002809.01.T01:CDS
GATTACTGGACCTGATCTAA+TGG 0.408689 1:-45642645 MsG0180002809.01.T01:CDS
CATTACACTTACAAAGCATA+AGG 0.410956 1:-45637946 MsG0180002809.01.T01:CDS
TTGAAGTGCACAGTGACATT+TGG 0.412823 1:+45640416 None:intergenic
CCCCAGGAACACCACCCATT+TGG 0.425269 1:+45642720 None:intergenic
ACCAAATGGGTGGTGTTCCT+GGG 0.430236 1:-45642721 MsG0180002809.01.T01:CDS
AGGCAAGCCGTAACTGCTGC+TGG 0.440096 1:-45638853 MsG0180002809.01.T01:CDS
TGGAGCATCACCTCTCTTCA+AGG 0.440116 1:-45641929 MsG0180002809.01.T01:CDS
AGAATGGTTACTGCGAAGAT+AGG 0.441679 1:-45644232 MsG0180002809.01.T01:CDS
GTAATCCCGTCCGGAAATCC+TGG 0.445169 1:+45642662 None:intergenic
TCCTCCTCCGTAGCCTCACC+AGG 0.445650 1:-45644004 MsG0180002809.01.T01:intron
ACAGTTGAGTATTTGGTGAA+TGG 0.448616 1:+45640273 None:intergenic
GTCTACTGGTGATGATTGTA+TGG 0.454108 1:-45644265 MsG0180002809.01.T01:five_prime_UTR
ATGAGAAGGTGAGGAGAGAG+AGG 0.459976 1:+45644153 None:intergenic
TAACATACCTTACTGAGGAT+TGG 0.461867 1:+45637688 None:intergenic
TTAGTAAGAAAGCTTGATAG+TGG 0.463519 1:-45640341 MsG0180002809.01.T01:CDS
CAGTGGCAATAATTACAGTA+TGG 0.463771 1:+45642031 None:intergenic
AGCAGAAGCAGCTGGAATCA+TGG 0.468143 1:-45636768 MsG0180002809.01.T01:CDS
AATGTGGTAATTATAGGTTC+AGG 0.468501 1:-45642812 MsG0180002809.01.T01:CDS
TGGCTTTAGAAGCCCTTAGT+TGG 0.469141 1:+45641806 None:intergenic
TCCAGATCCAGCAGCAGTTA+CGG 0.469420 1:+45638846 None:intergenic
CAAGTTGAACTTGACCAGTC+TGG 0.471614 1:-45640242 MsG0180002809.01.T01:CDS
ATTGAAATTTAGTTATATTG+AGG 0.472209 1:-45643789 MsG0180002809.01.T01:CDS
CCAAATGGGTGGTGTTCCTG+GGG 0.472359 1:-45642720 MsG0180002809.01.T01:CDS
AGTGTTCGAGGGTTACCAAA+TGG 0.478208 1:-45642735 MsG0180002809.01.T01:CDS
GTTGAAGGTGTATTTGCTGC+TGG 0.479454 1:-45640182 MsG0180002809.01.T01:CDS
GTGTTCGAGGGTTACCAAAT+GGG 0.480718 1:-45642734 MsG0180002809.01.T01:CDS
AAATTCTTGCTGTCGTTGGA+GGG 0.482006 1:-45641903 MsG0180002809.01.T01:CDS
TAGTAAGAAAGCTTGATAGT+GGG 0.482102 1:-45640340 MsG0180002809.01.T01:CDS
ATTACACTTACAAAGCATAA+GGG 0.483261 1:-45637945 MsG0180002809.01.T01:CDS
TTGTACGTCGAGACCAACTA+AGG 0.488217 1:-45641819 MsG0180002809.01.T01:CDS
ATTCTTGCTGTCGTTGGAGG+GGG 0.488532 1:-45641901 MsG0180002809.01.T01:CDS
GTATGGTCTGTAAGAAAGAA+TGG 0.492276 1:-45644248 MsG0180002809.01.T01:exon
TGGTAACCCTCGAACACTAC+GGG 0.495666 1:+45642740 None:intergenic
TGATACCTGTCCATTAGATC+AGG 0.500326 1:+45642635 None:intergenic
TTACGGCTTGCCTCCACTCA+TGG 0.500760 1:+45638863 None:intergenic
GGAGGAAGAAGTGTCGGAAG+AGG 0.501847 1:+45644021 None:intergenic
GGTCAAATTCTTGCTGTCGT+TGG 0.503789 1:-45641907 MsG0180002809.01.T01:CDS
CAGACTGGTCAAGTTCAACT+TGG 0.504331 1:+45640243 None:intergenic
TTTGAAACCCGTAGTGTTCG+AGG 0.508084 1:-45642747 MsG0180002809.01.T01:CDS
AGTAAGAAAGCTTGATAGTG+GGG 0.510964 1:-45640339 MsG0180002809.01.T01:CDS
GCAGAAGCAGCTGGAATCAT+GGG 0.511150 1:-45636767 MsG0180002809.01.T01:CDS
TGAGGAGAGAGAGGAAGCAG+TGG 0.512318 1:+45644162 None:intergenic
TGATGAACCTGGTGAGGCTA+CGG 0.513926 1:+45643997 None:intergenic
TATAATACACATATAAGCCT+TGG 0.515950 1:+45637748 None:intergenic
AATTCTTGCTGTCGTTGGAG+GGG 0.520948 1:-45641902 MsG0180002809.01.T01:CDS
CTCCAAAATTCATCTTCTCT+GGG 0.522044 1:+45641982 None:intergenic
TTGGTAACCCTCGAACACTA+CGG 0.523238 1:+45642739 None:intergenic
ACCTGGTGAGGCTACGGAGG+AGG 0.524573 1:+45644003 None:intergenic
AATACAAAAGGACAGATGTC+TGG 0.526372 1:-45640368 MsG0180002809.01.T01:CDS
AAAACATGAAGAGGTTAAGA+AGG 0.526385 1:-45638003 MsG0180002809.01.T01:CDS
GAGCAACTGCAAAACGACTT+AGG 0.527739 1:-45642008 MsG0180002809.01.T01:CDS
ATATAAGCCTTGGACTATCA+TGG 0.534266 1:+45637758 None:intergenic
ACTGCGAAGATAGGACTCTT+CGG 0.537342 1:-45644223 MsG0180002809.01.T01:CDS
AAGAAGTGTCGGAAGAGGCT+CGG 0.538210 1:+45644026 None:intergenic
ACTTTCCAGGATTTCCGGAC+GGG 0.538593 1:-45642667 MsG0180002809.01.T01:CDS
CCAGAAATAGCAGAAGCAGC+TGG 0.539369 1:-45636776 MsG0180002809.01.T01:CDS
ATTGAAGCCAATCCTCAGTA+AGG 0.540059 1:-45637695 MsG0180002809.01.T01:intron
TCTTCTTATAGAGTTCCATC+AGG 0.540274 1:-45638779 MsG0180002809.01.T01:intron
ATTATAGGTTCAGGTCCTGC+AGG 0.542012 1:-45642803 MsG0180002809.01.T01:CDS
GATATTGTGAGCAATACAAA+AGG 0.548161 1:-45640380 MsG0180002809.01.T01:CDS
TGTCCAAAGCAGTGAACGTA+AGG 0.549292 1:-45642439 MsG0180002809.01.T01:intron
ATTGCTGCTGTGTATCCTGC+AGG 0.551544 1:+45642788 None:intergenic
TACGGAGGAGGAAGAAGTGT+CGG 0.554402 1:+45644015 None:intergenic
TGGCTACTTACTAGTTAAAG+AGG 0.556564 1:-45640222 MsG0180002809.01.T01:CDS
ATTTGCTGCTGGAGATGTGC+AGG 0.558112 1:-45640171 MsG0180002809.01.T01:intron
TTAAGAAGGAATTAACAGAC+AGG 0.558919 1:-45637989 MsG0180002809.01.T01:CDS
AGTGCTTGTGCAATTTGTGA+TGG 0.559766 1:-45641949 MsG0180002809.01.T01:CDS
TCAGGTCCAGTAATCCCGTC+CGG 0.561894 1:+45642653 None:intergenic
TCGGACACACCTATCTTGCA+TGG 0.562404 1:+45641786 None:intergenic
AGTCAGTGCTTGAGGCCAAA+GGG 0.565727 1:-45640313 MsG0180002809.01.T01:CDS
GAGAGGAAGCAGTGGTGACA+CGG 0.566619 1:+45644170 None:intergenic
TATGCCGTAGAATAGCCCTT+TGG 0.566889 1:+45640298 None:intergenic
TGGGGAGGAGTCAGTGCTTG+AGG 0.568768 1:-45640321 MsG0180002809.01.T01:CDS
GAGGCCAAAGGGCTATTCTA+CGG 0.570443 1:-45640302 MsG0180002809.01.T01:CDS
CTGGACCTGATCTAATGGAC+AGG 0.572406 1:-45642640 MsG0180002809.01.T01:intron
TGCGACGGCAAGCTGAACGT+TGG 0.574702 1:-45642521 MsG0180002809.01.T01:CDS
TAACTAGTAAGTAGCCAGAC+TGG 0.575521 1:+45640228 None:intergenic
CCAAATACTCAACTGTTGAA+AGG 0.576006 1:-45640266 MsG0180002809.01.T01:CDS
AAGAAAGCTTGATAGTGGGG+AGG 0.580489 1:-45640336 MsG0180002809.01.T01:CDS
TTGAAACCCGTAGTGTTCGA+GGG 0.585198 1:-45642746 MsG0180002809.01.T01:CDS
TATTGAGGAAGAGTTAATTG+TGG 0.586545 1:-45643774 MsG0180002809.01.T01:intron
ACTTACAAAGCATAAGGGGC+AGG 0.590481 1:-45637940 MsG0180002809.01.T01:intron
GTAACAGCCAAAACATGAAG+AGG 0.591993 1:-45638012 MsG0180002809.01.T01:intron
GAGTCAGTGCTTGAGGCCAA+AGG 0.592233 1:-45640314 MsG0180002809.01.T01:CDS
GGTGACACGGTGGTTGTGAG+TGG 0.593710 1:+45644183 None:intergenic
GGAGCATCACCTCTCTTCAA+GGG 0.594248 1:-45641928 MsG0180002809.01.T01:CDS
GAAACGATGATGAGAAGGTG+AGG 0.595275 1:+45644144 None:intergenic
AATTGTACCATGATAGTCCA+AGG 0.599012 1:-45637765 MsG0180002809.01.T01:CDS
AACAGACAGGGATGTTCAAG+CGG 0.600644 1:-45637976 MsG0180002809.01.T01:CDS
CATACTGTAATTATTGCCAC+TGG 0.600711 1:-45642030 MsG0180002809.01.T01:CDS
AGAATTTGACCCTTGAAGAG+AGG 0.605923 1:+45641919 None:intergenic
TTCTTTAACATACCTTACTG+AGG 0.607014 1:+45637683 None:intergenic
TCTACTTGTCTAGGATGCGA+CGG 0.607303 1:-45642536 MsG0180002809.01.T01:intron
AACTTTCCAGGATTTCCGGA+CGG 0.607601 1:-45642668 MsG0180002809.01.T01:CDS
ACAGACAGGGATGTTCAAGC+GGG 0.607683 1:-45637975 MsG0180002809.01.T01:CDS
TGTTCTCATAGGACCATGAG+TGG 0.609661 1:-45638876 MsG0180002809.01.T01:intron
GTGACACGGTGGTTGTGAGT+GGG 0.610611 1:+45644184 None:intergenic
GAGAGATATCTCGTCAGCAG+TGG 0.622694 1:-45638802 MsG0180002809.01.T01:CDS
AAGTAATGATGAACCTGGTG+AGG 0.625517 1:+45643991 None:intergenic
TTACACTTACAAAGCATAAG+GGG 0.626930 1:-45637944 MsG0180002809.01.T01:CDS
AGGTAACGCAGTTGAAAATG+TGG 0.629242 1:-45642828 MsG0180002809.01.T01:CDS
AAGATGAAACGATGATGAGA+AGG 0.634067 1:+45644139 None:intergenic
ACACGGTGGTTGTGAGTGGG+AGG 0.635165 1:+45644187 None:intergenic
CACCGACATGTGGTCCGTGT+CGG 0.640430 1:-45637720 MsG0180002809.01.T01:CDS
CGACGGCAAGCTGAACGTTG+GGG 0.642828 1:-45642519 MsG0180002809.01.T01:CDS
TTCGAGGGTTACCAAATGGG+TGG 0.652902 1:-45642731 MsG0180002809.01.T01:CDS
AAGAACGAGAACGAAGAGAG+CGG 0.654263 1:+45644104 None:intergenic
GGCTACTTACTAGTTAAAGA+GGG 0.659261 1:-45640221 MsG0180002809.01.T01:CDS
AAAGGGCTATTCTACGGCAT+AGG 0.659759 1:-45640296 MsG0180002809.01.T01:CDS
GTCCGACACGGACCACATGT+CGG 0.665457 1:+45637718 None:intergenic
GCACTTCAATACAGAGACTG+TGG 0.669081 1:-45640402 MsG0180002809.01.T01:CDS
CAAATATAATGCTTCCTCTG+TGG 0.673525 1:+45641870 None:intergenic
CAAATGGGTGGTGTTCCTGG+GGG 0.675789 1:-45642719 MsG0180002809.01.T01:CDS
TGAACCTGGTGAGGCTACGG+AGG 0.676346 1:+45644000 None:intergenic
TTATACACGTCACCGACATG+TGG 0.678629 1:-45637730 MsG0180002809.01.T01:CDS
TGTACGTCGAGACCAACTAA+GGG 0.681720 1:-45641818 MsG0180002809.01.T01:CDS
TAAGAAGGAATTAACAGACA+GGG 0.686949 1:-45637988 MsG0180002809.01.T01:CDS
ATTGGCTTCAATGTCCGACA+CGG 0.691173 1:+45637706 None:intergenic
TCTCATAGGACCATGAGTGG+AGG 0.707926 1:-45638873 MsG0180002809.01.T01:intron
AGGAAGCAGTGGTGACACGG+TGG 0.735819 1:+45644173 None:intergenic
GAAGATAGGACTCTTCGGAG+TGG 0.740267 1:-45644218 MsG0180002809.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATGTAAAATTAATAG+AGG - Chr1:45641503-45641522 MsG0180002809.01.T01:intron 10.0%
!! ATAATATTCATTAAGATATA+TGG - Chr1:45644241-45644260 MsG0180002809.01.T01:exon 10.0%
!!! AAAATTGATGTTTTATAAAT+TGG - Chr1:45642249-45642268 MsG0180002809.01.T01:intron 10.0%
!!! ATTTTAACTTATAAACTAAT+TGG - Chr1:45638564-45638583 MsG0180002809.01.T01:intron 10.0%
!! AAAAAAATTAACTGTTTAGT+TGG - Chr1:45640904-45640923 MsG0180002809.01.T01:intron 15.0%
!! AAAAACTTCATAAATTGTAT+AGG - Chr1:45642281-45642300 MsG0180002809.01.T01:intron 15.0%
!! AAGTTAAAATCTTGAAATTT+CGG + Chr1:45638554-45638573 None:intergenic 15.0%
!! AATATAAGTGCTTATAAAAT+TGG + Chr1:45642166-45642185 None:intergenic 15.0%
!! AATCAACAATAAATACTATA+AGG + Chr1:45641479-45641498 None:intergenic 15.0%
!! AATGTTAGTAAAATAATAAC+AGG - Chr1:45642789-45642808 MsG0180002809.01.T01:CDS 15.0%
!! ATTGAAATTTAGTTATATTG+AGG - Chr1:45637111-45637130 MsG0180002809.01.T01:intron 15.0%
!! TACAACAAATATAATTAACT+TGG - Chr1:45639732-45639751 MsG0180002809.01.T01:intron 15.0%
!! TATATAAGAGAATACATTAA+TGG - Chr1:45643928-45643947 MsG0180002809.01.T01:intron 15.0%
!! TATTTGATAAGAAAGTTAAT+TGG - Chr1:45642315-45642334 MsG0180002809.01.T01:intron 15.0%
!! TCATTAACTACAATAATTAA+GGG + Chr1:45637553-45637572 None:intergenic 15.0%
!! TCATTTAATGTTTGATTATT+TGG - Chr1:45643051-45643070 MsG0180002809.01.T01:intron 15.0%
!! TGAATAATGAAAAAATATGA+AGG + Chr1:45639482-45639501 None:intergenic 15.0%
!! TTTGATTGAAAATTAATCAT+CGG + Chr1:45641270-45641289 None:intergenic 15.0%
!!! TTATGTCAATAATTTGTATT+GGG - Chr1:45639706-45639725 MsG0180002809.01.T01:intron 15.0%
!!! TTTATGTCAATAATTTGTAT+TGG - Chr1:45639705-45639724 MsG0180002809.01.T01:intron 15.0%
!!! TTTTTTTTCAAAACTTTTCA+TGG - Chr1:45644041-45644060 MsG0180002809.01.T01:CDS 15.0%
!! AAAAAATGAAGCAAAAACAA+AGG + Chr1:45639590-45639609 None:intergenic 20.0%
!! AGTATTTCATAAGAATTGAA+TGG - Chr1:45637267-45637286 MsG0180002809.01.T01:intron 20.0%
!! AGTCTATTTATCCTTAAATA+GGG - Chr1:45641670-45641689 MsG0180002809.01.T01:intron 20.0%
!! AGTTAAAATCTTGAAATTTC+GGG + Chr1:45638553-45638572 None:intergenic 20.0%
!! ATCAAAAGTGAACATATTTA+AGG + Chr1:45641911-45641930 None:intergenic 20.0%
!! ATCAAACACATTATGTTATT+AGG + Chr1:45639966-45639985 None:intergenic 20.0%
!! ATGCAATTAAAAATTCAAAG+AGG - Chr1:45641553-45641572 MsG0180002809.01.T01:intron 20.0%
!! ATTATATTGATCCCTATTTA+AGG + Chr1:45641684-45641703 None:intergenic 20.0%
!! ATTGTAGAATTGAAATTAGA+AGG + Chr1:45641058-45641077 None:intergenic 20.0%
!! CAAACATTAAATGAACTAAT+TGG + Chr1:45643045-45643064 None:intergenic 20.0%
!! CTCATTAACTACAATAATTA+AGG + Chr1:45637554-45637573 None:intergenic 20.0%
!! CTTAACATTTAATGTTCTTA+AGG - Chr1:45641812-45641831 MsG0180002809.01.T01:CDS 20.0%
!! CTTAATTATTGTAGTTAATG+AGG - Chr1:45637552-45637571 MsG0180002809.01.T01:intron 20.0%
!! CTTACAATTATAGATTGTAA+TGG + Chr1:45639265-45639284 None:intergenic 20.0%
!! TAATCCTTAACTACATTATA+AGG + Chr1:45641715-45641734 None:intergenic 20.0%
!! TAATGTGTAATACATTTGAT+GGG - Chr1:45639640-45639659 MsG0180002809.01.T01:intron 20.0%
!! TGCAATTAAAAATTCAAAGA+GGG - Chr1:45641554-45641573 MsG0180002809.01.T01:intron 20.0%
!! TGTATATTAGATTAATTCCT+AGG - Chr1:45641291-45641310 MsG0180002809.01.T01:intron 20.0%
!! TTAATGTGTAATACATTTGA+TGG - Chr1:45639639-45639658 MsG0180002809.01.T01:intron 20.0%
!! TTATCCTTATAATGTAGTTA+AGG - Chr1:45641708-45641727 MsG0180002809.01.T01:intron 20.0%
!! TTTCCAAGAATTAATTAATG+TGG + Chr1:45643513-45643532 None:intergenic 20.0%
!!! AAAATTTTAGGTTAGCAAAA+GGG - Chr1:45640274-45640293 MsG0180002809.01.T01:CDS 20.0%
!!! ATCTTCTTTGTGATATTTTA+TGG - Chr1:45638595-45638614 MsG0180002809.01.T01:intron 20.0%
!!! ATTATTATTGGTTGTATGTT+TGG + Chr1:45637638-45637657 None:intergenic 20.0%
!!! ATTTGATAGTCAGTTTTATT+TGG - Chr1:45638643-45638662 MsG0180002809.01.T01:intron 20.0%
!!! CTTATAAGCTTTTAAGTTAT+TGG - Chr1:45642744-45642763 MsG0180002809.01.T01:CDS 20.0%
!!! GATATTATTCTAGAATATCT+TGG - Chr1:45641237-45641256 MsG0180002809.01.T01:intron 20.0%
!!! GTGACAATTATTTTGATATA+TGG + Chr1:45637702-45637721 None:intergenic 20.0%
!!! TAAAATTTTAGGTTAGCAAA+AGG - Chr1:45640273-45640292 MsG0180002809.01.T01:CDS 20.0%
!!! TAGTTAGATCAATCTTTTAA+AGG - Chr1:45639432-45639451 MsG0180002809.01.T01:intron 20.0%
!!! TATCAAAATAATTGTCACTT+TGG - Chr1:45637704-45637723 MsG0180002809.01.T01:CDS 20.0%
!!! TATCACTTTTTCATACAAAA+AGG + Chr1:45641969-45641988 None:intergenic 20.0%
!!! TATGTCAATAATTTGTATTG+GGG - Chr1:45639707-45639726 MsG0180002809.01.T01:intron 20.0%
!!! TCAATTTTCAAAAAGAAACA+AGG + Chr1:45643397-45643416 None:intergenic 20.0%
!!! TGAAATTGATTACTTTTGTT+TGG - Chr1:45637207-45637226 MsG0180002809.01.T01:intron 20.0%
!!! TTCTATCATAAACCATATTT+TGG - Chr1:45643738-45643757 MsG0180002809.01.T01:intron 20.0%
!!! TTTCTATTAACTGATTTGTT+AGG - Chr1:45639675-45639694 MsG0180002809.01.T01:intron 20.0%
!!! TTTTGTTGAAATTGATATAG+AGG - Chr1:45644096-45644115 MsG0180002809.01.T01:CDS 20.0%
! AAACAATAATATCCAATTCG+TGG - Chr1:45638787-45638806 MsG0180002809.01.T01:CDS 25.0%
! AAACTTAGAGATTAATGAGT+TGG + Chr1:45643765-45643784 None:intergenic 25.0%
! AACAAACACATACTTAATCT+AGG + Chr1:45639767-45639786 None:intergenic 25.0%
! AAGAAATAACCTTAACATAG+GGG + Chr1:45642002-45642021 None:intergenic 25.0%
! AATTTGTGTATTCAATGCAT+TGG + Chr1:45641782-45641801 None:intergenic 25.0%
! AGAAGAAATAACCTTAACAT+AGG + Chr1:45642004-45642023 None:intergenic 25.0%
! ATAAACTAATTCTCTCTTGA+AGG + Chr1:45641451-45641470 None:intergenic 25.0%
! ATAGAGAAGCTAAAAATTGT+AGG - Chr1:45639837-45639856 MsG0180002809.01.T01:intron 25.0%
! ATGCCACATTAATTAATTCT+TGG - Chr1:45643507-45643526 MsG0180002809.01.T01:intron 25.0%
! ATGTTACGTGATTATATATC+TGG - Chr1:45640111-45640130 MsG0180002809.01.T01:intron 25.0%
! ATTACACTTACAAAGCATAA+GGG - Chr1:45642955-45642974 MsG0180002809.01.T01:intron 25.0%
! ATTTCAAATCTTGATCATGA+AGG + Chr1:45643862-45643881 None:intergenic 25.0%
! ATTTCATAAGAATTGAATGG+AGG - Chr1:45637270-45637289 MsG0180002809.01.T01:intron 25.0%
! CAATTATAGATTGTAATGGT+AGG + Chr1:45639261-45639280 None:intergenic 25.0%
! CATATTATCTATTGCTCTTT+AGG - Chr1:45642620-45642639 MsG0180002809.01.T01:intron 25.0%
! CCTGTTTATAAGAGAAAATT+GGG - Chr1:45637760-45637779 MsG0180002809.01.T01:CDS 25.0%
! CTTAAAAGCTTATAAGCATA+TGG + Chr1:45642740-45642759 None:intergenic 25.0%
! CTTTAAACTAAAATACCTGA+TGG + Chr1:45642139-45642158 None:intergenic 25.0%
! GAAGAAATAACCTTAACATA+GGG + Chr1:45642003-45642022 None:intergenic 25.0%
! GAATTAATTAATGTGGCATA+CGG + Chr1:45643506-45643525 None:intergenic 25.0%
! GAGTCTATTTATCCTTAAAT+AGG - Chr1:45641669-45641688 MsG0180002809.01.T01:intron 25.0%
! GCAAAATGCAAATATTCTAA+TGG - Chr1:45643612-45643631 MsG0180002809.01.T01:intron 25.0%
! GTCTAAATTGTCATTCAATA+GGG - Chr1:45640076-45640095 MsG0180002809.01.T01:intron 25.0%
! GTTAAAATCTTGAAATTTCG+GGG + Chr1:45638552-45638571 None:intergenic 25.0%
! GTTGAAAATGTGGTAATTAT+AGG - Chr1:45638082-45638101 MsG0180002809.01.T01:intron 25.0%
! TAAGGTATGTTAAAGAACAA+TGG - Chr1:45643223-45643242 MsG0180002809.01.T01:intron 25.0%
! TAATTTCCAATATGAATCTC+AGG - Chr1:45642848-45642867 MsG0180002809.01.T01:intron 25.0%
! TACGATGCTATATAATATAC+AGG + Chr1:45642192-45642211 None:intergenic 25.0%
! TATAATACACATATAAGCCT+TGG + Chr1:45643155-45643174 None:intergenic 25.0%
! TCCTGTTTATAAGAGAAAAT+TGG - Chr1:45637759-45637778 MsG0180002809.01.T01:CDS 25.0%
! TCGAGAATAAGTACTTAAAA+TGG - Chr1:45637367-45637386 MsG0180002809.01.T01:intron 25.0%
! TCTCTCTATATTTCAATAAG+AGG + Chr1:45637897-45637916 None:intergenic 25.0%
! TGAAAAAGTGATAATTGCTT+AGG - Chr1:45641976-45641995 MsG0180002809.01.T01:CDS 25.0%
! TGCATATAAATCAAAAGTGA+TGG + Chr1:45638745-45638764 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + Chr1:45643733-45643752 None:intergenic 25.0%
! TGTCTAAATTGTCATTCAAT+AGG - Chr1:45640075-45640094 MsG0180002809.01.T01:intron 25.0%
! TTCTCTATTATCAATTCTCA+AGG + Chr1:45639825-45639844 None:intergenic 25.0%
! TTTCAAATCTTGATCATGAA+GGG + Chr1:45643861-45643880 None:intergenic 25.0%
! TTTCATAAGAATTGAATGGA+GGG - Chr1:45637271-45637290 MsG0180002809.01.T01:intron 25.0%
!! AAGGGTCAATTTTTATTAAG+AGG - Chr1:45641586-45641605 MsG0180002809.01.T01:intron 25.0%
!! AATATTTGCATTTTGCTTGA+AGG + Chr1:45643608-45643627 None:intergenic 25.0%
!! AGAGTTAATTGTGGTAATTT+TGG - Chr1:45637135-45637154 MsG0180002809.01.T01:intron 25.0%
!! AGGGTCAATTTTTATTAAGA+GGG - Chr1:45641587-45641606 MsG0180002809.01.T01:intron 25.0%
!! GAACATATTTAAGGTGAAAA+GGG + Chr1:45641902-45641921 None:intergenic 25.0%
!! GTTTTACAAGAAAAATAGAG+AGG - Chr1:45640991-45641010 MsG0180002809.01.T01:intron 25.0%
!! TAACTTGCATAAATAAACCT+TGG - Chr1:45638328-45638347 MsG0180002809.01.T01:intron 25.0%
!! TAAGTTCCTCAAAATTTTGT+TGG - Chr1:45642350-45642369 MsG0180002809.01.T01:intron 25.0%
!! TGAACATATTTAAGGTGAAA+AGG + Chr1:45641903-45641922 None:intergenic 25.0%
!! TTAAAACTCTAATTTTCCAG+AGG + Chr1:45639405-45639424 None:intergenic 25.0%
!! TTATTTCTTCTTGTTCTCAT+AGG - Chr1:45642013-45642032 MsG0180002809.01.T01:CDS 25.0%
!!! AAATGTGACATTTTTTGAGA+CGG + Chr1:45637670-45637689 None:intergenic 25.0%
!!! ATAAGCTTTTAAGTTATTGG+TGG - Chr1:45642747-45642766 MsG0180002809.01.T01:CDS 25.0%
!!! GAAATTTTGATGTTAAGTGT+CGG - Chr1:45637035-45637054 MsG0180002809.01.T01:intron 25.0%
!!! GTTTCTCTTTTAGTTTTTCT+AGG - Chr1:45643794-45643813 MsG0180002809.01.T01:CDS 25.0%
!!! TGTGCAGTTTTTTAAAAACA+AGG - Chr1:45644165-45644184 MsG0180002809.01.T01:CDS 25.0%
!!! TTTGTAATTTGGCTTTTAGT+GGG - Chr1:45639921-45639940 MsG0180002809.01.T01:intron 25.0%
!!! TTTTTAAAAAACTGCACACA+CGG + Chr1:45644163-45644182 None:intergenic 25.0%
AAAACATGAAGAGGTTAAGA+AGG - Chr1:45642897-45642916 MsG0180002809.01.T01:intron 30.0%
AACCTGTTAAACAAACATTC+AGG + Chr1:45640432-45640451 None:intergenic 30.0%
AACTATGTCCTTTCTTTGAA+AGG + Chr1:45642655-45642674 None:intergenic 30.0%
AATATCCAATTCGTGGTATA+TGG - Chr1:45638794-45638813 MsG0180002809.01.T01:CDS 30.0%
AATGTGGTAATTATAGGTTC+AGG - Chr1:45638088-45638107 MsG0180002809.01.T01:intron 30.0%
ACCTGAATGTAATCAAGAAA+AGG + Chr1:45638843-45638862 None:intergenic 30.0%
ACTACATTTGTCCCTAAATA+TGG - Chr1:45641339-45641358 MsG0180002809.01.T01:intron 30.0%
AGAAGATGATTATTCCTTAG+AGG + Chr1:45643830-45643849 None:intergenic 30.0%
AGACTCAATCCTAAATAAGT+AGG + Chr1:45641655-45641674 None:intergenic 30.0%
AGAGAGTGGATAAACTAAAA+GGG + Chr1:45639331-45639350 None:intergenic 30.0%
ATAGATTGTAATGGTAGGAT+CGG + Chr1:45639256-45639275 None:intergenic 30.0%
ATATCCAATTCGTGGTATAT+GGG - Chr1:45638795-45638814 MsG0180002809.01.T01:CDS 30.0%
ATCACGAGAATTAAGAATGT+TGG - Chr1:45641377-45641396 MsG0180002809.01.T01:intron 30.0%
ATCAGAATCCTTTCAAAGAA+AGG - Chr1:45642644-45642663 MsG0180002809.01.T01:CDS 30.0%
ATCATAATTCTCTTCTCACA+TGG - Chr1:45639984-45640003 MsG0180002809.01.T01:intron 30.0%
ATGATACATGAGTACTTTCA+AGG - Chr1:45643318-45643337 MsG0180002809.01.T01:intron 30.0%
ATGGCAAATGATTCATCATA+TGG + Chr1:45638726-45638745 None:intergenic 30.0%
ATGTGACATTTAATCTGAGA+CGG + Chr1:45637452-45637471 None:intergenic 30.0%
ATTAGCATAAGCACCTAATA+AGG + Chr1:45642994-45643013 None:intergenic 30.0%
ATTGACAATACCATCAAACA+AGG + Chr1:45643999-45644018 None:intergenic 30.0%
CAAATGATTCATCATATGGT+CGG + Chr1:45638722-45638741 None:intergenic 30.0%
CAAGATTGAACATAGATCAA+TGG + Chr1:45641082-45641101 None:intergenic 30.0%
CATTACACTTACAAAGCATA+AGG - Chr1:45642954-45642973 MsG0180002809.01.T01:intron 30.0%
CCTAAATAAGTAGGGAATTT+AGG + Chr1:45641646-45641665 None:intergenic 30.0%
CCTAAATTCCCTACTTATTT+AGG - Chr1:45641643-45641662 MsG0180002809.01.T01:intron 30.0%
CTACATTTGTCCCTAAATAT+GGG - Chr1:45641340-45641359 MsG0180002809.01.T01:intron 30.0%
CTATTTCGACTTCTTTATGA+AGG - Chr1:45640363-45640382 MsG0180002809.01.T01:CDS 30.0%
GACTCAATCCTAAATAAGTA+GGG + Chr1:45641654-45641673 None:intergenic 30.0%
GAGAGTTGGGAAATATTAAT+CGG + Chr1:45639136-45639155 None:intergenic 30.0%
GAGATATGGAAATTTATCCT+AGG + Chr1:45641311-45641330 None:intergenic 30.0%
GAGTCTATGTTTGAAAGAAT+AGG - Chr1:45640796-45640815 MsG0180002809.01.T01:intron 30.0%
GATATTGTGAGCAATACAAA+AGG - Chr1:45640520-45640539 MsG0180002809.01.T01:intron 30.0%
GATTTGATATAGAAGACCAA+GGG + Chr1:45641866-45641885 None:intergenic 30.0%
GTTAGATATCATAGTACTCA+TGG - Chr1:45643272-45643291 MsG0180002809.01.T01:intron 30.0%
TAAGAAGGAATTAACAGACA+GGG - Chr1:45642912-45642931 MsG0180002809.01.T01:intron 30.0%
TAATGGTAAGTAGTTATCAG+TGG - Chr1:45642377-45642396 MsG0180002809.01.T01:intron 30.0%
TAATTTACGGCTTAAATGTC+AGG + Chr1:45637410-45637429 None:intergenic 30.0%
TAGAAAATTTGTGAACTCCA+AGG + Chr1:45638348-45638367 None:intergenic 30.0%
TAGTTGGCTAGCATAATTTA+CGG + Chr1:45637423-45637442 None:intergenic 30.0%
TATAAGCTCAAGTGAACATA+AGG + Chr1:45639540-45639559 None:intergenic 30.0%
TATTGAGGAAGAGTTAATTG+TGG - Chr1:45637126-45637145 MsG0180002809.01.T01:intron 30.0%
TCAACATTTATTACTACCTC+CGG - Chr1:45637736-45637755 MsG0180002809.01.T01:CDS 30.0%
TCAGTGAGAACCAAAATTAT+TGG - Chr1:45637928-45637947 MsG0180002809.01.T01:intron 30.0%
TGCTAATGAGAATAAAGTCT+TGG - Chr1:45643007-45643026 MsG0180002809.01.T01:intron 30.0%
TGTAGTAATGACAAGAGATA+TGG + Chr1:45641325-45641344 None:intergenic 30.0%
TTAAAAACACTATACTCCCT+CGG + Chr1:45637870-45637889 None:intergenic 30.0%
TTAAGAAGGAATTAACAGAC+AGG - Chr1:45642911-45642930 MsG0180002809.01.T01:intron 30.0%
TTACACTTACAAAGCATAAG+GGG - Chr1:45642956-45642975 MsG0180002809.01.T01:intron 30.0%
TTACGTGAGGACAAATTATA+AGG - Chr1:45642547-45642566 MsG0180002809.01.T01:intron 30.0%
TTAGTAAGAAAGCTTGATAG+TGG - Chr1:45640559-45640578 MsG0180002809.01.T01:intron 30.0%
TTCTTTAACATACCTTACTG+AGG + Chr1:45643220-45643239 None:intergenic 30.0%
TTGAAATAACTAAGTGTAGC+AGG + Chr1:45642582-45642601 None:intergenic 30.0%
! AACCTACAAGCCAATAATTT+TGG + Chr1:45637941-45637960 None:intergenic 30.0%
! AAGTAGCTATAAGCCTTTTA+GGG - Chr1:45640945-45640964 MsG0180002809.01.T01:intron 30.0%
! AATTGTCTTTTGTTAGATGG+TGG - Chr1:45643359-45643378 MsG0180002809.01.T01:intron 30.0%
! AATTTTCCTAGACCAAAACT+AGG + Chr1:45637612-45637631 None:intergenic 30.0%
! ACCTTTTCTTGATTACATTC+AGG - Chr1:45638839-45638858 MsG0180002809.01.T01:CDS 30.0%
! ACTACCAGCTGTAAAATTTT+AGG - Chr1:45640262-45640281 MsG0180002809.01.T01:CDS 30.0%
! ATTAAGAGGGTCTTGTATTT+AGG - Chr1:45641600-45641619 MsG0180002809.01.T01:intron 30.0%
! ATTATGAAGTGTTTAAGAGC+AGG + Chr1:45639304-45639323 None:intergenic 30.0%
! ATTGCTATCAATCCTAGTTT+TGG - Chr1:45637597-45637616 MsG0180002809.01.T01:intron 30.0%
! CAAAGAGGGTCTTATAAAAA+GGG - Chr1:45641568-45641587 MsG0180002809.01.T01:intron 30.0%
! CACAAATTTTCTACTTGTCT+AGG - Chr1:45638355-45638374 MsG0180002809.01.T01:intron 30.0%
! CATAATTTGATGACACAATG+AGG - Chr1:45642456-45642475 MsG0180002809.01.T01:CDS 30.0%
! CCCAATTTTCTCTTATAAAC+AGG + Chr1:45637763-45637782 None:intergenic 30.0%
! CCTTTTTATAGGAGAAACTT+GGG + Chr1:45637845-45637864 None:intergenic 30.0%
! CGGGTTGTTGTTATTATTAT+TGG + Chr1:45637650-45637669 None:intergenic 30.0%
! CTAACCTAAAATTTTACAGC+TGG + Chr1:45640269-45640288 None:intergenic 30.0%
! GACAATTGTCTTTTGTTAGA+TGG - Chr1:45643356-45643375 MsG0180002809.01.T01:intron 30.0%
! TAAGTAGCTATAAGCCTTTT+AGG - Chr1:45640944-45640963 MsG0180002809.01.T01:intron 30.0%
! TAATGAGTTGGACCAAAATA+TGG + Chr1:45643753-45643772 None:intergenic 30.0%
! TAGTAAGAAAGCTTGATAGT+GGG - Chr1:45640560-45640579 MsG0180002809.01.T01:intron 30.0%
! TATAATTTGTCCTCACGTAA+AGG + Chr1:45642547-45642566 None:intergenic 30.0%
! TCAAAGAGGGTCTTATAAAA+AGG - Chr1:45641567-45641586 MsG0180002809.01.T01:intron 30.0%
! TCCTTTTTATAGGAGAAACT+TGG + Chr1:45637846-45637865 None:intergenic 30.0%
! TTAAGAGGGTCTTGTATTTA+GGG - Chr1:45641601-45641620 MsG0180002809.01.T01:intron 30.0%
! TTCCTCAAAATTTTGTTGGT+GGG - Chr1:45642354-45642373 MsG0180002809.01.T01:intron 30.0%
! TTCTTAACCTCTTCATGTTT+TGG + Chr1:45642898-45642917 None:intergenic 30.0%
! TTTTCAAAACTTTTCATGGC+AGG - Chr1:45644045-45644064 MsG0180002809.01.T01:CDS 30.0%
! TTTTCTCTTATAAACAGGAC+CGG + Chr1:45637758-45637777 None:intergenic 30.0%
!! AAAATTTTGTTGGTGGGTAA+TGG - Chr1:45642360-45642379 MsG0180002809.01.T01:intron 30.0%
!! AACCAAAATTATTGGCTTGT+AGG - Chr1:45637936-45637955 MsG0180002809.01.T01:intron 30.0%
!!! AAGGTTACGATGCATTTTTT+TGG - Chr1:45637065-45637084 MsG0180002809.01.T01:intron 30.0%
!!! AATGTGACATTTTTTGAGAC+GGG + Chr1:45637669-45637688 None:intergenic 30.0%
!!! CTTTGTAATTTGGCTTTTAG+TGG - Chr1:45639920-45639939 MsG0180002809.01.T01:intron 30.0%
!!! GCATTTTTTTGGTCTGTTAT+TGG - Chr1:45637076-45637095 MsG0180002809.01.T01:intron 30.0%
!!! TTGTAATTTGGCTTTTAGTG+GGG - Chr1:45639922-45639941 MsG0180002809.01.T01:intron 30.0%
AAATCATTGAAGCTCCCATT+TGG + Chr1:45642484-45642503 None:intergenic 35.0%
AACATAAGGTGGAAACTGAA+AGG + Chr1:45639526-45639545 None:intergenic 35.0%
AACTGAAAGGAAAAACAGAG+AGG + Chr1:45639513-45639532 None:intergenic 35.0%
AAGATGAAACGATGATGAGA+AGG + Chr1:45636764-45636783 None:intergenic 35.0%
AATACAAAAGGACAGATGTC+TGG - Chr1:45640532-45640551 MsG0180002809.01.T01:intron 35.0%
AATCATTGAAGCTCCCATTT+GGG + Chr1:45642483-45642502 None:intergenic 35.0%
AATTGTACCATGATAGTCCA+AGG - Chr1:45643135-45643154 MsG0180002809.01.T01:intron 35.0%
ACGAGAATTAAGAATGTTGG+TGG - Chr1:45641380-45641399 MsG0180002809.01.T01:intron 35.0%
ACTGCAAAAACTTCAGTTGA+AGG - Chr1:45640703-45640722 MsG0180002809.01.T01:intron 35.0%
AGGGTAGTTGTTAAAGGATT+TGG - Chr1:45637290-45637309 MsG0180002809.01.T01:intron 35.0%
AGGTTAGCAAAAGGGATTAA+AGG - Chr1:45640282-45640301 MsG0180002809.01.T01:CDS 35.0%
ATATAAGCCTTGGACTATCA+TGG + Chr1:45643145-45643164 None:intergenic 35.0%
ATATTTCCCAACTCTCTACT+TGG - Chr1:45639140-45639159 MsG0180002809.01.T01:intron 35.0%
ATTCTCGTGATTTAGTGAAG+CGG + Chr1:45641368-45641387 None:intergenic 35.0%
ATTTCCTGTCAGTTTGAGTA+TGG - Chr1:45640334-45640353 MsG0180002809.01.T01:CDS 35.0%
CAAATATAATGCTTCCTCTG+TGG + Chr1:45639033-45639052 None:intergenic 35.0%
CAAATTCGCACTAGTGTTAT+AGG - Chr1:45636962-45636981 MsG0180002809.01.T01:intron 35.0%
CAGTGGCAATAATTACAGTA+TGG + Chr1:45638872-45638891 None:intergenic 35.0%
CATACTGTAATTATTGCCAC+TGG - Chr1:45638870-45638889 MsG0180002809.01.T01:intron 35.0%
CCACGTTAATACATTCACAA+CGG + Chr1:45643897-45643916 None:intergenic 35.0%
CCCAAGTTTCTCCTATAAAA+AGG - Chr1:45637842-45637861 MsG0180002809.01.T01:intron 35.0%
CGATTTGATATAGAAGACCA+AGG + Chr1:45641867-45641886 None:intergenic 35.0%
CGTTCTCTAATTCCATATCA+AGG + Chr1:45641105-45641124 None:intergenic 35.0%
CTCCAAAATTCATCTTCTCT+GGG + Chr1:45638921-45638940 None:intergenic 35.0%
CTCCTGAATGTTTGTTTAAC+AGG - Chr1:45640427-45640446 MsG0180002809.01.T01:CDS 35.0%
CTCTCTAATGTTTGGGAAAT+GGG - Chr1:45641025-45641044 MsG0180002809.01.T01:intron 35.0%
GAAAACTATCTGCTTAGTCT+AGG - Chr1:45640215-45640234 MsG0180002809.01.T01:CDS 35.0%
GAGAGAGTGGATAAACTAAA+AGG + Chr1:45639332-45639351 None:intergenic 35.0%
GAGAGTGGATAAACTAAAAG+GGG + Chr1:45639330-45639349 None:intergenic 35.0%
GCAGGTATGTATTCCTTATT+AGG - Chr1:45642978-45642997 MsG0180002809.01.T01:intron 35.0%
GCTAAGGCTTCTTTGTAATT+TGG - Chr1:45639910-45639929 MsG0180002809.01.T01:intron 35.0%
GGCTACTTACTAGTTAAAGA+GGG - Chr1:45640679-45640698 MsG0180002809.01.T01:intron 35.0%
GTATGGTCTGTAAGAAAGAA+TGG - Chr1:45636652-45636671 MsG0180002809.01.T01:CDS 35.0%
GTTGTTAAAGGATTTGGAGA+TGG - Chr1:45637296-45637315 MsG0180002809.01.T01:intron 35.0%
TAAAAACACTATACTCCCTC+GGG + Chr1:45637869-45637888 None:intergenic 35.0%
TAACATACCTTACTGAGGAT+TGG + Chr1:45643215-45643234 None:intergenic 35.0%
TAACTAAGTGTAGCAGGTAA+TGG + Chr1:45642576-45642595 None:intergenic 35.0%
TCCAGATCTCTCTAATGTTT+GGG - Chr1:45641018-45641037 MsG0180002809.01.T01:intron 35.0%
TCTCTCTAATGTTTGGGAAA+TGG - Chr1:45641024-45641043 MsG0180002809.01.T01:intron 35.0%
TCTTCTTATAGAGTTCCATC+AGG - Chr1:45642121-45642140 MsG0180002809.01.T01:intron 35.0%
TGAGTTATGCACGGTTATTA+AGG - Chr1:45637473-45637492 MsG0180002809.01.T01:intron 35.0%
TGGCTACTTACTAGTTAAAG+AGG - Chr1:45640678-45640697 MsG0180002809.01.T01:intron 35.0%
TGTTCAATCTTGCCTTGATA+TGG - Chr1:45641090-45641109 MsG0180002809.01.T01:intron 35.0%
TTCCAGATCTCTCTAATGTT+TGG - Chr1:45641017-45641036 MsG0180002809.01.T01:intron 35.0%
! ACTTTCACTTCCTTGTTTGA+TGG - Chr1:45643986-45644005 MsG0180002809.01.T01:intron 35.0%
! ATCAACACAAAGCATCCAAT+AGG + Chr1:45640758-45640777 None:intergenic 35.0%
! CGGTAGTTTTTATGACATTC+AGG + Chr1:45638702-45638721 None:intergenic 35.0%
! GTTCCTCAAAATTTTGTTGG+TGG - Chr1:45642353-45642372 MsG0180002809.01.T01:intron 35.0%
! TACCCACCAACAAAATTTTG+AGG + Chr1:45642359-45642378 None:intergenic 35.0%
! TACCCAGAGAAGATGAATTT+TGG - Chr1:45638916-45638935 MsG0180002809.01.T01:intron 35.0%
! TCACTTGTTAGTATTTCCCT+TGG - Chr1:45641847-45641866 MsG0180002809.01.T01:CDS 35.0%
! TGTCACATTTGAGTTATGCA+CGG - Chr1:45637464-45637483 MsG0180002809.01.T01:intron 35.0%
! TTGGTTCTCACTGAGTAATA+AGG + Chr1:45637922-45637941 None:intergenic 35.0%
!! AGTAAGAAAGCTTGATAGTG+GGG - Chr1:45640561-45640580 MsG0180002809.01.T01:intron 35.0%
!! ATTTTGCAAGCACGCTTTTT+TGG + Chr1:45640040-45640059 None:intergenic 35.0%
!! TCAACCAAAGTTGATGTATC+TGG + Chr1:45637822-45637841 None:intergenic 35.0%
!! TTTGGTGTCAATATCGTGTT+AGG - Chr1:45637225-45637244 MsG0180002809.01.T01:intron 35.0%
!!! AGCTTTTAAGTTATTGGTGG+AGG - Chr1:45642750-45642769 MsG0180002809.01.T01:CDS 35.0%
!!! ATCAATCCTAGTTTTGGTCT+AGG - Chr1:45637603-45637622 MsG0180002809.01.T01:intron 35.0%
!!! TGACAGTTTTTTCTTCTCAC+AGG - Chr1:45638052-45638071 MsG0180002809.01.T01:intron 35.0%
!!! TTTTGCAAGCACGCTTTTTT+GGG + Chr1:45640039-45640058 None:intergenic 35.0%
AAAGGATTTGGAGATGGCTT+AGG - Chr1:45637302-45637321 MsG0180002809.01.T01:intron 40.0%
AAATACTAACAAGTGACCCC+GGG + Chr1:45641843-45641862 None:intergenic 40.0%
AACTCCATACTCAAACTGAC+AGG + Chr1:45640341-45640360 None:intergenic 40.0%
AACTCCCATATACCACGAAT+TGG + Chr1:45638802-45638821 None:intergenic 40.0%
AAGCTCAAGTGAACATAAGG+TGG + Chr1:45639537-45639556 None:intergenic 40.0%
AAGTAATGATGAACCTGGTG+AGG + Chr1:45636912-45636931 None:intergenic 40.0%
ACTGAAGTAGAGAACTTTCC+AGG - Chr1:45638220-45638239 MsG0180002809.01.T01:intron 40.0%
AGAATGGTTACTGCGAAGAT+AGG - Chr1:45636668-45636687 MsG0180002809.01.T01:CDS 40.0%
AGAATTTGACCCTTGAAGAG+AGG + Chr1:45638984-45639003 None:intergenic 40.0%
AGAGAACTTTCCAGGATTTC+CGG - Chr1:45638228-45638247 MsG0180002809.01.T01:intron 40.0%
AGAGCAAGTAATGATGAACC+TGG + Chr1:45636917-45636936 None:intergenic 40.0%
AGGTAACGCAGTTGAAAATG+TGG - Chr1:45638072-45638091 MsG0180002809.01.T01:intron 40.0%
AGTGCTTGTGCAATTTGTGA+TGG - Chr1:45638951-45638970 MsG0180002809.01.T01:intron 40.0%
ATCACACATTCCTTTACGTG+AGG - Chr1:45642534-45642553 MsG0180002809.01.T01:intron 40.0%
ATTGAAGCCAATCCTCAGTA+AGG - Chr1:45643205-45643224 MsG0180002809.01.T01:intron 40.0%
ATTGGAAAGAGAATGACCAC+AGG + Chr1:45640013-45640032 None:intergenic 40.0%
CAGTCCAGATACATCAACTT+TGG - Chr1:45637815-45637834 MsG0180002809.01.T01:intron 40.0%
CCGTTGTGAATGTATTAACG+TGG - Chr1:45643894-45643913 MsG0180002809.01.T01:intron 40.0%
CTGTAAACAGGAAAACGTAC+AGG + Chr1:45643102-45643121 None:intergenic 40.0%
GAAATACTAACAAGTGACCC+CGG + Chr1:45641844-45641863 None:intergenic 40.0%
GAACACTACGGGTTTCAAAT+TGG + Chr1:45638152-45638171 None:intergenic 40.0%
GAATGGAGGGTAGTTGTTAA+AGG - Chr1:45637284-45637303 MsG0180002809.01.T01:intron 40.0%
GAGGTAGTTGAGTATAACAG+TGG - Chr1:45637571-45637590 MsG0180002809.01.T01:intron 40.0%
GATTACTGGACCTGATCTAA+TGG - Chr1:45638255-45638274 MsG0180002809.01.T01:intron 40.0%
GCTCCAAAATTCATCTTCTC+TGG + Chr1:45638922-45638941 None:intergenic 40.0%
GGCTGTTACAGGAAACAAAT+TGG + Chr1:45642877-45642896 None:intergenic 40.0%
GTAACAGCCAAAACATGAAG+AGG - Chr1:45642888-45642907 MsG0180002809.01.T01:intron 40.0%
TAACTAGTAAGTAGCCAGAC+TGG + Chr1:45640675-45640694 None:intergenic 40.0%
TCCCAAACATTAGAGAGATC+TGG + Chr1:45641022-45641041 None:intergenic 40.0%
TGATACCTGTCCATTAGATC+AGG + Chr1:45638268-45638287 None:intergenic 40.0%
TGATTATTCCTTAGAGGCAG+AGG + Chr1:45643824-45643843 None:intergenic 40.0%
TGGAAGCCTGAGATTCATAT+TGG + Chr1:45642857-45642876 None:intergenic 40.0%
TTAAATGTCAGGCTGAGTGT+TGG + Chr1:45637399-45637418 None:intergenic 40.0%
TTAGCCTATGTTTGTGTTGG+CGG + Chr1:45639895-45639914 None:intergenic 40.0%
TTCTCGTGATTTAGTGAAGC+GGG + Chr1:45641367-45641386 None:intergenic 40.0%
TTGAAGTGCACAGTGACATT+TGG + Chr1:45640487-45640506 None:intergenic 40.0%
! AAATTCTTGCTGTCGTTGGA+GGG - Chr1:45638997-45639016 MsG0180002809.01.T01:intron 40.0%
! TAATAGAGGTATGCGTATGC+TGG - Chr1:45641517-45641536 MsG0180002809.01.T01:intron 40.0%
! TCACTGCTTTGGACAGTAAA+AGG + Chr1:45638456-45638475 None:intergenic 40.0%
!! AGTGGCTTTGAGCAATGTTA+CGG - Chr1:45642395-45642414 MsG0180002809.01.T01:intron 40.0%
!! CTTCTAAAGCCATGCAAGAT+AGG - Chr1:45639105-45639124 MsG0180002809.01.T01:intron 40.0%
!! GTTAAGTGTCGGAGAAAACA+AGG - Chr1:45637046-45637065 MsG0180002809.01.T01:intron 40.0%
!! TCTTTTGTTAGATGGTGGTG+TGG - Chr1:45643364-45643383 MsG0180002809.01.T01:intron 40.0%
!!! CTTCATGTTTTGGCTGTTAC+AGG + Chr1:45642888-45642907 None:intergenic 40.0%
!!! GAAGATGAATTTTGGAGCAG+AGG - Chr1:45638924-45638943 MsG0180002809.01.T01:intron 40.0%
!!! TTTGCAAGCACGCTTTTTTG+GGG + Chr1:45640038-45640057 None:intergenic 40.0%
AAAGGGCTATTCTACGGCAT+AGG - Chr1:45640604-45640623 MsG0180002809.01.T01:intron 45.0%
AACAGACAGGGATGTTCAAG+CGG - Chr1:45642924-45642943 MsG0180002809.01.T01:intron 45.0%
AACTTTCCAGGATTTCCGGA+CGG - Chr1:45638232-45638251 MsG0180002809.01.T01:intron 45.0%
AAGAACGAGAACGAAGAGAG+CGG + Chr1:45636799-45636818 None:intergenic 45.0%
AATACTAACAAGTGACCCCG+GGG + Chr1:45641842-45641861 None:intergenic 45.0%
ACATACGCACAAGATTCCTC+TGG - Chr1:45639386-45639405 MsG0180002809.01.T01:intron 45.0%
ACTGCGAAGATAGGACTCTT+CGG - Chr1:45636677-45636696 MsG0180002809.01.T01:CDS 45.0%
ACTTACAAAGCATAAGGGGC+AGG - Chr1:45642960-45642979 MsG0180002809.01.T01:intron 45.0%
AGTGTTCGAGGGTTACCAAA+TGG - Chr1:45638165-45638184 MsG0180002809.01.T01:intron 45.0%
ATTATAGGTTCAGGTCCTGC+AGG - Chr1:45638097-45638116 MsG0180002809.01.T01:intron 45.0%
CAGCTACCAAGTAGAGAGTT+GGG + Chr1:45639149-45639168 None:intergenic 45.0%
CTCCTATAAAAAGGACCCGA+GGG - Chr1:45637851-45637870 MsG0180002809.01.T01:intron 45.0%
GAAACGATGATGAGAAGGTG+AGG + Chr1:45636759-45636778 None:intergenic 45.0%
GACACAATGAGGTCCCAAAT+GGG - Chr1:45642467-45642486 MsG0180002809.01.T01:CDS 45.0%
GAGATGTGCAGGTAACCTAT+TGG - Chr1:45640740-45640759 MsG0180002809.01.T01:intron 45.0%
GAGCAACTGCAAAACGACTT+AGG - Chr1:45638892-45638911 MsG0180002809.01.T01:intron 45.0%
GCACTTCAATACAGAGACTG+TGG - Chr1:45640498-45640517 MsG0180002809.01.T01:intron 45.0%
GCCAACACAAACATAGGCTA+AGG - Chr1:45639894-45639913 MsG0180002809.01.T01:intron 45.0%
GCCTTAGCCTATGTTTGTGT+TGG + Chr1:45639898-45639917 None:intergenic 45.0%
GTGTTCGAGGGTTACCAAAT+GGG - Chr1:45638166-45638185 MsG0180002809.01.T01:intron 45.0%
TATGCCGTAGAATAGCCCTT+TGG + Chr1:45640605-45640624 None:intergenic 45.0%
TCACCTTACGTTCACTGCTT+TGG + Chr1:45638467-45638486 None:intergenic 45.0%
TCAGCTACCAAGTAGAGAGT+TGG + Chr1:45639150-45639169 None:intergenic 45.0%
TCCGACATATGAGCATCACA+GGG + Chr1:45643470-45643489 None:intergenic 45.0%
TCGCAGAGCATACTGTAAAC+AGG + Chr1:45643114-45643133 None:intergenic 45.0%
TCTCCTATAAAAAGGACCCG+AGG - Chr1:45637850-45637869 MsG0180002809.01.T01:intron 45.0%
TCTCTTATAAACAGGACCGG+AGG + Chr1:45637755-45637774 None:intergenic 45.0%
TGAAGCGGGTCCCATATTTA+GGG + Chr1:45641353-45641372 None:intergenic 45.0%
TGACACAATGAGGTCCCAAA+TGG - Chr1:45642466-45642485 MsG0180002809.01.T01:CDS 45.0%
TGTACGTCGAGACCAACTAA+GGG - Chr1:45639082-45639101 MsG0180002809.01.T01:intron 45.0%
TGTCCAAAGCAGTGAACGTA+AGG - Chr1:45638461-45638480 MsG0180002809.01.T01:intron 45.0%
TGTTCTCATAGGACCATGAG+TGG - Chr1:45642024-45642043 MsG0180002809.01.T01:CDS 45.0%
TTATACACGTCACCGACATG+TGG - Chr1:45643170-45643189 MsG0180002809.01.T01:intron 45.0%
TTCCGACATATGAGCATCAC+AGG + Chr1:45643471-45643490 None:intergenic 45.0%
TTGAAACCCGTAGTGTTCGA+GGG - Chr1:45638154-45638173 MsG0180002809.01.T01:intron 45.0%
TTGCTTAGGCCCCTATGTTA+AGG - Chr1:45641990-45642009 MsG0180002809.01.T01:CDS 45.0%
TTGTACGTCGAGACCAACTA+AGG - Chr1:45639081-45639100 MsG0180002809.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr1:45643684-45643703 MsG0180002809.01.T01:intron 45.0%
! AATTCTTGCTGTCGTTGGAG+GGG - Chr1:45638998-45639017 MsG0180002809.01.T01:intron 45.0%
! ATTGGCTTCAATGTCCGACA+CGG + Chr1:45643197-45643216 None:intergenic 45.0%
! CAAATTCTTGCTGTCGTTGG+AGG - Chr1:45638996-45639015 MsG0180002809.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr1:45643683-45643702 MsG0180002809.01.T01:intron 45.0%
! CAAGTTGAACTTGACCAGTC+TGG - Chr1:45640658-45640677 MsG0180002809.01.T01:intron 45.0%
! CAGACTGGTCAAGTTCAACT+TGG + Chr1:45640660-45640679 None:intergenic 45.0%
! GAGGGTCTTGTATTTAGGGA+CGG - Chr1:45641605-45641624 MsG0180002809.01.T01:intron 45.0%
! GGTCAAATTCTTGCTGTCGT+TGG - Chr1:45638993-45639012 MsG0180002809.01.T01:intron 45.0%
! GTTGAAGGTGTATTTGCTGC+TGG - Chr1:45640718-45640737 MsG0180002809.01.T01:intron 45.0%
! TCTACTTGTCTAGGATGCGA+CGG - Chr1:45638364-45638383 MsG0180002809.01.T01:intron 45.0%
! TTGGTAACCCTCGAACACTA+CGG + Chr1:45638164-45638183 None:intergenic 45.0%
! TTTGAAACCCGTAGTGTTCG+AGG - Chr1:45638153-45638172 MsG0180002809.01.T01:intron 45.0%
!! AAGAAAGCTTGATAGTGGGG+AGG - Chr1:45640564-45640583 MsG0180002809.01.T01:intron 45.0%
!! AATGTTCTTAAGGAGTGCCC+CGG - Chr1:45641822-45641841 MsG0180002809.01.T01:CDS 45.0%
!! AGCCTTTTAGGGAGAGTCAT+TGG - Chr1:45640956-45640975 MsG0180002809.01.T01:intron 45.0%
!! CTTTTAGGGAGAGTCATTGG+CGG - Chr1:45640959-45640978 MsG0180002809.01.T01:intron 45.0%
!! GTGGCTTTGAGCAATGTTAC+GGG - Chr1:45642396-45642415 MsG0180002809.01.T01:intron 45.0%
!! TGGCTTTAGAAGCCCTTAGT+TGG + Chr1:45639097-45639116 None:intergenic 45.0%
!!! GCACGCTTTTTTGGGGAAAT+TGG + Chr1:45640031-45640050 None:intergenic 45.0%
ACAGACAGGGATGTTCAAGC+GGG - Chr1:45642925-45642944 MsG0180002809.01.T01:intron 50.0%
ACCAAATGGGTGGTGTTCCT+GGG - Chr1:45638179-45638198 MsG0180002809.01.T01:intron 50.0%
ACTTTCCAGGATTTCCGGAC+GGG - Chr1:45638233-45638252 MsG0180002809.01.T01:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+TGG + Chr1:45639345-45639364 None:intergenic 50.0%
AGCAGAAGCAGCTGGAATCA+TGG - Chr1:45644132-45644151 MsG0180002809.01.T01:CDS 50.0%
AGTCAGTGCTTGAGGCCAAA+GGG - Chr1:45640587-45640606 MsG0180002809.01.T01:intron 50.0%
ATATGAGCATCACAGGGCAC+TGG + Chr1:45643464-45643483 None:intergenic 50.0%
ATGAGAAGGTGAGGAGAGAG+AGG + Chr1:45636750-45636769 None:intergenic 50.0%
ATTGCTGCTGTGTATCCTGC+AGG + Chr1:45638115-45638134 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr1:45643685-45643704 None:intergenic 50.0%
CCAGAAATAGCAGAAGCAGC+TGG - Chr1:45644124-45644143 MsG0180002809.01.T01:CDS 50.0%
CGCCAATGACTCTCCCTAAA+AGG + Chr1:45640961-45640980 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr1:45643688-45643707 MsG0180002809.01.T01:intron 50.0%
CTTTCTCGTGAACGTGCGTT+AGG + Chr1:45639869-45639888 None:intergenic 50.0%
GAAGATAGGACTCTTCGGAG+TGG - Chr1:45636682-45636701 MsG0180002809.01.T01:CDS 50.0%
GAGAGATATCTCGTCAGCAG+TGG - Chr1:45642098-45642117 MsG0180002809.01.T01:intron 50.0%
GAGGCCAAAGGGCTATTCTA+CGG - Chr1:45640598-45640617 MsG0180002809.01.T01:intron 50.0%
GCAGAAGCAGCTGGAATCAT+GGG - Chr1:45644133-45644152 MsG0180002809.01.T01:CDS 50.0%
GCCCTGTGATGCTCATATGT+CGG - Chr1:45643466-45643485 MsG0180002809.01.T01:intron 50.0%
GTAGTCATCAATTGTCCCCC+AGG + Chr1:45638199-45638218 None:intergenic 50.0%
GTGAAGCGGGTCCCATATTT+AGG + Chr1:45641354-45641373 None:intergenic 50.0%
TACCAAATGGGTGGTGTTCC+TGG - Chr1:45638178-45638197 MsG0180002809.01.T01:intron 50.0%
TAGGTCTTCCTCTGCCTCTA+AGG - Chr1:45643813-45643832 MsG0180002809.01.T01:CDS 50.0%
TCCAGATCCAGCAGCAGTTA+CGG + Chr1:45642057-45642076 None:intergenic 50.0%
TCGGACACACCTATCTTGCA+TGG + Chr1:45639117-45639136 None:intergenic 50.0%
TCTCATAGGACCATGAGTGG+AGG - Chr1:45642027-45642046 MsG0180002809.01.T01:CDS 50.0%
TCTTCTCACATGGCAACCTG+TGG - Chr1:45639994-45640013 MsG0180002809.01.T01:intron 50.0%
TGATGAACCTGGTGAGGCTA+CGG + Chr1:45636906-45636925 None:intergenic 50.0%
TGGTAACCCTCGAACACTAC+GGG + Chr1:45638163-45638182 None:intergenic 50.0%
TTCGAGGGTTACCAAATGGG+TGG - Chr1:45638169-45638188 MsG0180002809.01.T01:intron 50.0%
! ATTCTTGCTGTCGTTGGAGG+GGG - Chr1:45638999-45639018 MsG0180002809.01.T01:intron 50.0%
! ATTTGCTGCTGGAGATGTGC+AGG - Chr1:45640729-45640748 MsG0180002809.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr1:45643682-45643701 MsG0180002809.01.T01:intron 50.0%
! CTCCCTCGGGTCCTTTTTAT+AGG + Chr1:45637856-45637875 None:intergenic 50.0%
! CTGGACCTGATCTAATGGAC+AGG - Chr1:45638260-45638279 MsG0180002809.01.T01:intron 50.0%
! GGAGCATCACCTCTCTTCAA+GGG - Chr1:45638972-45638991 MsG0180002809.01.T01:intron 50.0%
! GGTCTTGTATTTAGGGACGG+AGG - Chr1:45641608-45641627 MsG0180002809.01.T01:intron 50.0%
! TACGGAGGAGGAAGAAGTGT+CGG + Chr1:45636888-45636907 None:intergenic 50.0%
! TCGTTTTGCAGTTGCTCCAG+TGG + Chr1:45638889-45638908 None:intergenic 50.0%
! TCTGAGACGGAGAGAGTAGT+TGG + Chr1:45637439-45637458 None:intergenic 50.0%
! TGGAGCATCACCTCTCTTCA+AGG - Chr1:45638971-45638990 MsG0180002809.01.T01:intron 50.0%
!! AAGAAGTGTCGGAAGAGGCT+CGG + Chr1:45636877-45636896 None:intergenic 50.0%
!! ATGTTCTTAAGGAGTGCCCC+GGG - Chr1:45641823-45641842 MsG0180002809.01.T01:CDS 50.0%
!! CCAGCTGCTTCTGCTATTTC+TGG + Chr1:45644127-45644146 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr1:45643696-45643715 MsG0180002809.01.T01:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr1:45643697-45643716 None:intergenic 55.0%
CAAATGGGTGGTGTTCCTGG+GGG - Chr1:45638181-45638200 MsG0180002809.01.T01:intron 55.0%
CAAGGCTCTCAAACGCACAG+TGG + Chr1:45639807-45639826 None:intergenic 55.0%
CCAAATGGGTGGTGTTCCTG+GGG - Chr1:45638180-45638199 MsG0180002809.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr1:45643690-45643709 None:intergenic 55.0%
GAGAGGAAGCAGTGGTGACA+CGG + Chr1:45636733-45636752 None:intergenic 55.0%
GAGTCAGTGCTTGAGGCCAA+AGG - Chr1:45640586-45640605 MsG0180002809.01.T01:intron 55.0%
GCACAGTGGCAGTGGTGAAA+CGG + Chr1:45639793-45639812 None:intergenic 55.0%
GCCACCGCCAACACAAACAT+AGG - Chr1:45639888-45639907 MsG0180002809.01.T01:intron 55.0%
GGATTTCCGGACGGGATTAC+TGG - Chr1:45638241-45638260 MsG0180002809.01.T01:intron 55.0%
GTAATCCCGTCCGGAAATCC+TGG + Chr1:45638241-45638260 None:intergenic 55.0%
GTGACACGGTGGTTGTGAGT+GGG + Chr1:45636719-45636738 None:intergenic 55.0%
TCAGGTCCAGTAATCCCGTC+CGG + Chr1:45638250-45638269 None:intergenic 55.0%
TCTCAAACGCACAGTGGCAG+TGG + Chr1:45639801-45639820 None:intergenic 55.0%
TGAGGAGAGAGAGGAAGCAG+TGG + Chr1:45636741-45636760 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr1:45643696-45643715 None:intergenic 55.0%
TTACGGCTTGCCTCCACTCA+TGG + Chr1:45642040-45642059 None:intergenic 55.0%
! GCCTATGTTTGTGTTGGCGG+TGG + Chr1:45639892-45639911 None:intergenic 55.0%
!! GGAGGAAGAAGTGTCGGAAG+AGG + Chr1:45636882-45636901 None:intergenic 55.0%
!! TGTTCTTAAGGAGTGCCCCG+GGG - Chr1:45641824-45641843 MsG0180002809.01.T01:CDS 55.0%
ACACGGTGGTTGTGAGTGGG+AGG + Chr1:45636716-45636735 None:intergenic 60.0%
AGGAAGCAGTGGTGACACGG+TGG + Chr1:45636730-45636749 None:intergenic 60.0%
AGGCAAGCCGTAACTGCTGC+TGG - Chr1:45642047-45642066 MsG0180002809.01.T01:intron 60.0%
AGGGGGTGATACAGCCACAG+AGG - Chr1:45639016-45639035 MsG0180002809.01.T01:intron 60.0%
CACCGACATGTGGTCCGTGT+CGG - Chr1:45643180-45643199 MsG0180002809.01.T01:intron 60.0%
CCCCAGGAACACCACCCATT+TGG + Chr1:45638183-45638202 None:intergenic 60.0%
CGACGGCAAGCTGAACGTTG+GGG - Chr1:45638381-45638400 MsG0180002809.01.T01:intron 60.0%
GCCGTAACTGCTGCTGGATC+TGG - Chr1:45642053-45642072 MsG0180002809.01.T01:intron 60.0%
GCGACGGCAAGCTGAACGTT+GGG - Chr1:45638380-45638399 MsG0180002809.01.T01:intron 60.0%
GGTGACACGGTGGTTGTGAG+TGG + Chr1:45636720-45636739 None:intergenic 60.0%
GTCCGACACGGACCACATGT+CGG + Chr1:45643185-45643204 None:intergenic 60.0%
TGAACCTGGTGAGGCTACGG+AGG + Chr1:45636903-45636922 None:intergenic 60.0%
TGCGACGGCAAGCTGAACGT+TGG - Chr1:45638379-45638398 MsG0180002809.01.T01:intron 60.0%
TGGGGAGGAGTCAGTGCTTG+AGG - Chr1:45640579-45640598 MsG0180002809.01.T01:intron 60.0%
ACCTGGTGAGGCTACGGAGG+AGG + Chr1:45636900-45636919 None:intergenic 65.0%
TCCTCCTCCGTAGCCTCACC+AGG - Chr1:45636896-45636915 MsG0180002809.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 45636637 45644285 45636637 ID=MsG0180002809.01;Name=MsG0180002809.01
Chr1 mRNA 45636637 45644285 45636637 ID=MsG0180002809.01.T01;Parent=MsG0180002809.01;Name=MsG0180002809.01.T01;_AED=0.40;_eAED=0.45;_QI=34|0.77|0.7|1|0.77|0.7|10|0|573
Chr1 exon 45636637 45636855 45636637 ID=MsG0180002809.01.T01:exon:38726;Parent=MsG0180002809.01.T01
Chr1 exon 45637696 45637800 45637696 ID=MsG0180002809.01.T01:exon:38725;Parent=MsG0180002809.01.T01
Chr1 exon 45637941 45638027 45637941 ID=MsG0180002809.01.T01:exon:38724;Parent=MsG0180002809.01.T01
Chr1 exon 45638780 45638887 45638780 ID=MsG0180002809.01.T01:exon:38723;Parent=MsG0180002809.01.T01
Chr1 exon 45640172 45640451 45640172 ID=MsG0180002809.01.T01:exon:38722;Parent=MsG0180002809.01.T01
Chr1 exon 45641796 45642061 45641796 ID=MsG0180002809.01.T01:exon:38721;Parent=MsG0180002809.01.T01
Chr1 exon 45642440 45642545 45642440 ID=MsG0180002809.01.T01:exon:38720;Parent=MsG0180002809.01.T01
Chr1 exon 45642641 45642864 45642641 ID=MsG0180002809.01.T01:exon:38719;Parent=MsG0180002809.01.T01
Chr1 exon 45643775 45643854 45643775 ID=MsG0180002809.01.T01:exon:38718;Parent=MsG0180002809.01.T01
Chr1 exon 45644005 45644285 45644005 ID=MsG0180002809.01.T01:exon:38717;Parent=MsG0180002809.01.T01
Chr1 five_prime_UTR 45644252 45644285 45644252 ID=MsG0180002809.01.T01:five_prime_utr;Parent=MsG0180002809.01.T01
Chr1 CDS 45644005 45644251 45644005 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45643775 45643854 45643775 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45642641 45642864 45642641 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45642440 45642545 45642440 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45641796 45642061 45641796 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45640172 45640451 45640172 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45638780 45638887 45638780 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45637941 45638027 45637941 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45637696 45637800 45637696 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Chr1 CDS 45636637 45636855 45636637 ID=MsG0180002809.01.T01:cds;Parent=MsG0180002809.01.T01
Gene Sequence

>MsG0180002809.01.T01

ATGGTTACTGCGAAGATAGGACTCTTCGGAGTGGCAACACTTCCTCCCACTCACAACCACCGTGTCACCACTGCTTCCTCTCTCTCCTCACCTTCTCATCATCGTTTCATCTTCATCAACTCACGCCGCTCTCTTCGTTCTCGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCACACTCCGAGCCTCTTCCGACACTTCTTCCTCCTCCGTAGCCTCACCAGGTTACGATGCATTTTTTTGGTCTGTTATTGGATTTAGATTTATATTGAAATTTAGTTATATTGAGGAAGAGTTAATTGTGTTTTTTCTTCTCACAGGTAACGCAGTTGAAAATGTGGTAATTATAGGTTCAGGTCCTGCAGGATACACAGCAGCAATATATGCTGCACGAGCCAATTTGAAACCCGTAGTGTTCGAGGGTTACCAAATGGGTGGTGTTCCTGGGGGACAATTGATGACTACAACTGAAGTAGAGAACTTTCCAGGATTTCCGGACGGGATTACTGGACCTGATCTAATGGACAGGATGCGACGGCAAGCTGAACGTTGGGGAGCAGAATTGCATCATGAAGATGTTGAAGCTATTGATGTGAAGACTAGTCCTTTTACTGTCCAAAGCAGTGAACGTAAGGTTAAGAGCCATACTGTAATTATTGCCACTGGAGCAACTGCAAAACGACTTAGGCTACCCAGAGAAGATGAATTTTGGAGCAGAGGAATTAGTGCTTGTGCAATTTGTGATGGAGCATCACCTCTCTTCAAGGGTCAAATTCTTGCTGTCGTTGGAGGGGGTGATACAGCCACAGAGGAAGCATTATATTTGACAAAATATGCTCGTCATGTTCACTTACTTGTACGTCGAGACCAACTAAGGGCTTCTAAAGCCATGCAAGATAGAGTGTATGACAATCCAAATGTCACTGTGCACTTCAATACAGAGACTGTGGATATTGTGAGCAATACAAAAGGACAGATGTCTGGCATTTTAGTAAGAAAGCTTGATAGTGGGGAGGAGTCAGTGCTTGAGGCCAAAGGGCTATTCTACGGCATAGGCCATTCACCAAATACTCAACTGTTGAAAGGCCAAGTTGAACTTGACCAGTCTGGCTACTTACTAGTTAAAGAGGGTACTGCAAAAACTTCAGTTGAAGGTGTATTTGCTGCTGGAGATGTGCAGGACCATGAGTGGAGGCAAGCCGTAACTGCTGCTGGATCTGGATGTATTGCAGCTTTATCAGTTGAGAGATATCTCGTCAGCAGTGGTCTTCTTATAGAGTTCCATCAGCCAAAACATGAAGAGGTTAAGAAGGAATTAACAGACAGGGATGTTCAAGCGGGCTTTGACATTACACTTACAAAGCATAAGGGGCAGTATGCTCTGCGAAAATTGTACCATGATAGTCCAAGGCTTATATGTGTATTATACACGTCACCGACATGTGGTCCGTGTCGGACATTGAAGCCAATCCTCAGTAAGGTAATTGATGAATATGATCAGAGTGTACATTTTGTTGAAATTGATATAGAGGAAGATCCAGAAATAGCAGAAGCAGCTGGAATCATGGGTACTCCGTGTGTGCAGTTTTTTAAAAACAAGGAGAATCTTAAGTTAGTACTGCTTGATCTTTTCTATTATTATTTCTTATCATTTATAATATTCATTAAGATATATGGTTCAAGCATGAGTTTGTCATGA

Protein sequence

>MsG0180002809.01.T01

MVTAKIGLFGVATLPPTHNHRVTTASSLSSPSHHRFIFINSRRSLRSRSSSSSSSSSSSSSSSSSLTLRASSDTSSSSVASPGYDAFFWSVIGFRFILKFSYIEEELIVFFLLTGNAVENVVIIGSGPAGYTAAIYAARANLKPVVFEGYQMGGVPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHHEDVEAIDVKTSPFTVQSSERKVKSHTVIIATGATAKRLRLPREDEFWSRGISACAICDGASPLFKGQILAVVGGGDTATEEALYLTKYARHVHLLVRRDQLRASKAMQDRVYDNPNVTVHFNTETVDIVSNTKGQMSGILVRKLDSGEESVLEAKGLFYGIGHSPNTQLLKGQVELDQSGYLLVKEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGSGCIAALSVERYLVSSGLLIEFHQPKHEEVKKELTDRDVQAGFDITLTKHKGQYALRKLYHDSPRLICVLYTSPTCGPCRTLKPILSKVIDEYDQSVHFVEIDIEEDPEIAEAAGIMGTPCVQFFKNKENLKLVLLDLFYYYFLSFIIFIKIYGSSMSLS*