AlfalfaGEDB | Msa0015710

M. sativa cultivar zhongmu-4 / Msa0015710

KEGG: -
GO: -
PFAM: PF04852.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0015710	sp\|O82268\|LSH3_ARATH	73.684	190	40	1	5	194	6	185	4.53e-87	259

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0015710	A0A072VGF5	96.729	214	5	1	1	212	1	214	1.23e-148	421

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006980	Msa0015710	0.828397	9.196955e-55	-8.615850e-47
Msa0015710	Msa0016120	0.908514	1.573971e-81	-8.615850e-47
Msa0015710	Msa0055450	0.825324	4.988049e-54	-8.615850e-47
Msa0015710	Msa0109880	0.933874	9.630045e-96	-8.615850e-47
Msa0015710	Msa0124130	0.858793	6.452883e-63	-8.615850e-47
Msa0015710	Msa0149140	0.841809	3.792822e-58	-8.615850e-47
Msa0015710	Msa0156250	0.896176	4.739962e-76	-8.615850e-47
Msa0015710	Msa0185490	0.808261	3.378838e-50	-8.615850e-47
Msa0015710	Msa0212150	0.839858	1.232309e-57	-8.615850e-47
Msa0015710	Msa0239030	0.804119	2.516952e-49	-8.615850e-47
Msa0015710	Msa0252630	0.806208	9.195475e-50	-8.615850e-47
Msa0015710	Msa0252770	0.833661	4.692305e-56	-8.615850e-47
Msa0015710	Msa0289920	0.835717	1.426416e-56	-8.615850e-47
Msa0015710	Msa0306120	0.854748	1.000843e-61	-8.615850e-47
Msa0015710	Msa0316680	0.805391	1.365579e-49	-8.615850e-47
Msa0015710	Msa0322840	0.819155	1.347291e-52	-8.615850e-47
Msa0015710	Msa0329620	0.848764	4.977268e-60	-8.615850e-47
Msa0015710	Msa0333700	0.807877	4.078466e-50	-8.615850e-47
Msa0015710	Msa0359250	0.852658	3.995511e-61	-8.615850e-47
Msa0015710	Msa0373960	0.833576	4.927487e-56	-8.615850e-47
Msa0015710	Msa0392420	0.811773	5.919436e-51	-8.615850e-47
Msa0015710	Msa0392460	0.803726	3.037326e-49	-8.615850e-47
Msa0015710	Msa0406000	0.865044	7.857145e-65	-8.615850e-47
Msa0015710	Msa0423100	0.810334	1.213726e-50	-8.615850e-47
Msa0015710	Msa0424330	0.807159	5.791712e-50	-8.615850e-47
Msa0015710	Msa0424340	0.818957	1.494600e-52	-8.615850e-47
Msa0015710	Msa0451400	0.863580	2.248827e-64	-8.615850e-47
Msa0015710	Msa0469260	0.820571	6.392394e-53	-8.615850e-47
Msa0015710	Msa0487570	0.816240	6.125168e-52	-8.615850e-47
Msa0015710	Msa0492190	0.847799	9.203278e-60	-8.615850e-47
Msa0015710	Msa0515950	0.803644	3.159298e-49	-8.615850e-47
Msa0015710	Msa0535040	0.810723	1.000478e-50	-8.615850e-47
Msa0015710	Msa0575740	0.800186	1.622173e-48	-8.615850e-47
Msa0015710	Msa0591790	0.826015	3.420090e-54	-8.615850e-47
Msa0015710	Msa0594090	0.811299	7.504015e-51	-8.615850e-47
Msa0015710	Msa0669840	0.844256	8.463368e-59	-8.615850e-47
Msa0015710	Msa0725860	0.805826	1.106405e-49	-8.615850e-47
Msa0015710	Msa0727930	0.803638	3.167849e-49	-8.615850e-47
Msa0015710	Msa0739580	0.860095	2.622411e-63	-8.615850e-47
Msa0015710	Msa0782360	0.839554	1.478055e-57	-8.615850e-47
Msa0015710	Msa0823400	0.813917	2.008137e-51	-8.615850e-47
Msa0015710	Msa0828830	0.943415	1.254789e-102	-8.615850e-47
Msa0015710	Msa0860280	0.861993	6.942092e-64	-8.615850e-47
Msa0015710	Msa0905970	0.800792	1.220750e-48	-8.615850e-47
Msa0015710	Msa0929870	0.800990	1.112090e-48	-8.615850e-47
Msa0015710	Msa0944760	0.809746	1.625156e-50	-8.615850e-47
Msa0015710	Msa0965310	0.801014	1.099656e-48	-8.615850e-47
Msa0015710	Msa0996270	0.813791	2.140556e-51	-8.615850e-47
Msa0015710	Msa0999300	0.824469	7.937416e-54	-8.615850e-47
Msa0015710	Msa0999340	0.800116	1.676158e-48	-8.615850e-47
Msa0015710	Msa0999350	0.844606	6.814060e-59	-8.615850e-47
Msa0015710	Msa0999360	0.822791	1.960588e-53	-8.615850e-47
Msa0015710	Msa0999400	0.832032	1.191368e-55	-8.615850e-47
Msa0015710	Msa0999410	0.823430	1.391238e-53	-8.615850e-47
Msa0015710	Msa1001890	0.809822	1.564787e-50	-8.615850e-47
Msa0015710	Msa1037900	0.812893	3.371634e-51	-8.615850e-47
Msa0015710	Msa1037910	0.807551	4.782739e-50	-8.615850e-47
Msa0015710	Msa1125810	0.816170	6.349088e-52	-8.615850e-47
Msa0015710	Msa1145020	0.816862	4.442789e-52	-8.615850e-47
Msa0015710	Msa1171310	0.815021	1.144151e-51	-8.615850e-47
Msa0015710	Msa1201160	0.823979	1.034538e-53	-8.615850e-47
Msa0015710	Msa1228190	0.855113	7.842619e-62	-8.615850e-47
Msa0015710	Msa1271260	0.831876	1.301577e-55	-8.615850e-47
Msa0015710	Msa1294290	0.813461	2.529568e-51	-8.615850e-47
Msa0015710	Msa1305510	0.824929	6.185068e-54	-8.615850e-47
Msa0015710	Msa1379970	0.835547	1.575201e-56	-8.615850e-47
Msa0015710	Msa1406780	0.871537	6.337235e-67	-8.615850e-47
Msa0015710	Msa1421550	0.848057	7.811738e-60	-8.615850e-47
Msa0015710	Msa1423460	0.811353	7.305118e-51	-8.615850e-47
Msa0015710	Msa1431850	0.876551	1.275907e-68	-8.615850e-47
Msa0015710	Msa1435480	0.841716	4.013205e-58	-8.615850e-47
Msa0015710	Msa1456730	0.800647	1.306284e-48	-8.615850e-47
Msa0015710	Msa1458910	0.811857	5.676974e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0015710	MtrunA17_Chr1g0167411	96.729	214	5	1	1	212	1	214	2.37e-152	421
Msa0015710	MtrunA17_Chr1g0187671	90.260	154	15	0	51	204	41	194	4.54e-90	263
Msa0015710	MtrunA17_Chr5g0431211	80.282	142	28	0	53	194	27	168	6.38e-88	258
Msa0015710	MtrunA17_Chr4g0051251	83.704	135	22	0	62	196	45	179	4.79e-87	256
Msa0015710	MtrunA17_Chr7g0261381	74.742	194	48	1	1	193	1	194	7.06e-86	253
Msa0015710	MtrunA17_Chr1g0183761	96.183	131	5	0	63	193	45	175	4.50e-84	248
Msa0015710	MtrunA17_Chr3g0105921	70.760	171	39	2	35	194	3	173	2.31e-76	229
Msa0015710	MtrunA17_Chr2g0325831	71.724	145	41	0	42	186	2	146	3.10e-75	224
Msa0015710	MtrunA17_Chr4g0041141	74.436	133	34	0	54	186	20	152	7.21e-75	223
Msa0015710	MtrunA17_Chr2g0315791	65.644	163	55	1	32	193	1	163	9.95e-74	221
Msa0015710	MtrunA17_Chr2g0283861	72.662	139	38	0	55	193	27	165	5.20e-72	216
Msa0015710	MtrunA17_Chr7g0274631	63.924	158	55	2	38	194	2	158	3.15e-71	214
Msa0015710	MtrunA17_Chr1g0190231	78.378	148	32	0	40	187	17	164	4.67e-71	214
Msa0015710	MtrunA17_Chr8g0379061	72.800	125	34	0	62	186	84	208	7.56e-57	180
Msa0015710	MtrunA17_Chr1g0211641	84.783	46	7	0	56	101	64	109	6.89e-24	91.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0015710	AT2G31160.1	73.684	190	40	1	5	194	6	185	4.60e-88	259
Msa0015710	AT1G07090.1	77.551	147	28	1	49	195	22	163	1.00e-86	254
Msa0015710	AT3G23290.2	95.238	126	6	0	62	187	47	172	5.33e-82	243
Msa0015710	AT5G58500.1	80.741	135	25	1	61	194	17	151	8.27e-82	241
Msa0015710	AT5G28490.1	80.405	148	23	1	45	192	13	154	1.72e-75	226
Msa0015710	AT2G42610.1	77.344	128	29	0	59	186	21	148	9.29e-73	218
Msa0015710	AT2G42610.2	77.344	128	29	0	59	186	21	148	9.29e-73	218
Msa0015710	AT3G04510.1	65.169	178	45	1	15	192	2	162	4.34e-71	215
Msa0015710	AT1G78815.1	62.585	147	55	0	62	208	39	185	9.06e-67	204
Msa0015710	AT4G18610.1	64.138	145	51	1	43	186	17	161	5.03e-64	197
Msa0015710	AT1G16910.1	57.419	155	61	1	37	191	2	151	5.06e-62	191

Find 64 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCATCATGTCTTTGTTCT+TGG	0.227073	1_1:-25317834	None:intergenic
CACACAAATTTATTACAAAA+TGG	0.255478	1_1:-25319668	None:intergenic
TTGCGTTACCTCGACCAATT+TGG	0.269006	1_1:+25318100	Msa0015710:CDS
TGGATTTGGATGTCCATAAA+AGG	0.277270	1_1:-25318152	None:intergenic
CAAAATGGACCGTGAATAAT+TGG	0.289752	1_1:-25319653	None:intergenic
GTTGTTGTTGATGTTGTTGA+TGG	0.314316	1_1:-25317959	None:intergenic
GGACATGGTGCAGGTGGATT+TGG	0.320133	1_1:-25318166	None:intergenic
GACTTTACCTTCGCGAAGTT+AGG	0.323181	1_1:+25318305	Msa0015710:CDS
GATGATGGGTTTGTTATCAT+AGG	0.327393	1_1:-25317863	None:intergenic
TGAAAATAAATGATAGGGTT+TGG	0.339101	1_1:-25317713	None:intergenic
TATTTGTGAAAATAAATGAT+AGG	0.354121	1_1:-25317719	None:intergenic
AAGCCAGAAGCTAATCCTTT+TGG	0.361490	1_1:+25318268	Msa0015710:CDS
AGAAGAGATTGGAACACATT+TGG	0.367128	1_1:+25318007	Msa0015710:CDS
GTGGTGGTCTATGGTTTCTT+AGG	0.368488	1_1:-25318036	None:intergenic
GGTGGTGGTGGTGGCGGCTG+AGG	0.370057	1_1:-25318385	None:intergenic
ACTTTACCTTCGCGAAGTTA+GGG	0.398859	1_1:+25318306	Msa0015710:CDS
GCACCAAAAGGATTAGCTTC+TGG	0.418214	1_1:-25318271	None:intergenic
GTTGTAGTTGCATTATTTGA+TGG	0.419514	1_1:-25318406	None:intergenic
ATTTGTGAAAATAAATGATA+GGG	0.429262	1_1:-25317718	None:intergenic
TAGTAGCAGCAGTAACTAAA+GGG	0.431809	1_1:+25319615	Msa0015710:three_prime_UTR
GGTAGTCTTGATGCACTCAT+TGG	0.434097	1_1:+25318211	Msa0015710:CDS
AGAATCAAAAGAGAAGAGAT+TGG	0.459394	1_1:+25317996	Msa0015710:CDS
CTTGTCCTCTTCGCCAAGCG+TGG	0.459831	1_1:+25318188	Msa0015710:CDS
GGTGGTGGTGGCGGCTGAGG+CGG	0.465046	1_1:-25318382	None:intergenic
GTAGTAGCAGCAGTAACTAA+AGG	0.470487	1_1:+25319614	Msa0015710:three_prime_UTR
GCATTATTTGATGGTGGTGG+TGG	0.471088	1_1:-25318397	None:intergenic
GAAGAGAATTCATTGTTACT+TGG	0.472778	1_1:-25317793	None:intergenic
ATGGAAACTGCAGTGAAAGC+TGG	0.474521	1_1:+25319543	Msa0015710:three_prime_UTR
ATGATGGGTTTGTTATCATA+GGG	0.482921	1_1:-25317862	None:intergenic
TTATTTGATGGTGGTGGTGG+TGG	0.487231	1_1:-25318394	None:intergenic
TTGTCCTCTTCGCCAAGCGT+GGG	0.488923	1_1:+25318189	Msa0015710:CDS
CGAGGTAACGCAAGAATTCA+AGG	0.492274	1_1:-25318090	None:intergenic
AGAGTGAAAGTGGTGGTCTA+TGG	0.493036	1_1:-25318045	None:intergenic
ATAAATTTGTGTGTACTTGA+AGG	0.495736	1_1:+25319678	Msa0015710:three_prime_UTR
GTAGTCTTGATGCACTCATT+GGG	0.507513	1_1:+25318212	Msa0015710:CDS
TTTGTGTGACCAATTATTCA+CGG	0.508487	1_1:+25319644	Msa0015710:three_prime_UTR
TGATGTTGTTGTTGTGGACG+AGG	0.511739	1_1:-25317933	None:intergenic
GTTGCATTATTTGATGGTGG+TGG	0.513644	1_1:-25318400	None:intergenic
CGAACAGCACGAGCACCAAA+AGG	0.514487	1_1:-25318283	None:intergenic
TGGAAACTGCAGTGAAAGCT+GGG	0.516292	1_1:+25319544	Msa0015710:three_prime_UTR
TGGAGGTGATGTTGTTGTTG+TGG	0.519070	1_1:-25317939	None:intergenic
CACGCTTGGCGAAGAGGACA+AGG	0.527749	1_1:-25318187	None:intergenic
GTTGTTGATGTTGTTGATGG+AGG	0.529776	1_1:-25317956	None:intergenic
CTTTCACTCTCACGTTGTAG+TGG	0.531680	1_1:+25318058	Msa0015710:CDS
GGATTTGGATGTCCATAAAA+GGG	0.532805	1_1:-25318151	None:intergenic
CATCAAGACTACCCCACGCT+TGG	0.543485	1_1:-25318201	None:intergenic
GTAGTTGCATTATTTGATGG+TGG	0.544780	1_1:-25318403	None:intergenic
GTCATCGTCATGGATGATGA+TGG	0.559458	1_1:-25317878	None:intergenic
AGAGGACAAGGACATGGTGC+AGG	0.565916	1_1:-25318175	None:intergenic
CTACCCCACGCTTGGCGAAG+AGG	0.567363	1_1:-25318193	None:intergenic
CTACAACGTGAGAGTGAAAG+TGG	0.580478	1_1:-25318055	None:intergenic
GGACAAGGACATGGTGCAGG+TGG	0.588264	1_1:-25318172	None:intergenic
TGTTGTAGATGATGATGGTA+TGG	0.601682	1_1:-25317900	None:intergenic
GCTGATGTTGTAGATGATGA+TGG	0.601848	1_1:-25317905	None:intergenic
TGTCCTCTTCGCCAAGCGTG+GGG	0.612011	1_1:+25318190	Msa0015710:CDS
TGGCGAAGAGGACAAGGACA+TGG	0.629659	1_1:-25318181	None:intergenic
GAAGTCTTGAGATCAGTACA+TGG	0.630606	1_1:+25319496	Msa0015710:intron
TGATGGTATGGTCATCGTCA+TGG	0.630871	1_1:-25317888	None:intergenic
GATTCTCAAGCTAAAGCTAG+AGG	0.638819	1_1:+25318328	Msa0015710:CDS
GAGAATCCCTAACTTCGCGA+AGG	0.649287	1_1:-25318312	None:intergenic
TCATCGTCATGGATGATGAT+GGG	0.650264	1_1:-25317877	None:intergenic
CTGCAGTGTGAGATATGCAA+TGG	0.653802	1_1:+25319524	Msa0015710:three_prime_UTR
AAGTCTTGAGATCAGTACAT+GGG	0.676097	1_1:+25319497	Msa0015710:three_prime_UTR
CAACGTGAGAGTGAAAGTGG+TGG	0.746060	1_1:-25318052	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTGTGAAAATAAATGATA+GGG	-	chr1_1:25317721-25317740	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	-	chr1_1:25317722-25317741	None:intergenic	15.0%
!!!	CAAACTTTTTTAATAAGAAT+AGG	-	chr1_1:25318733-25318752	None:intergenic	15.0%
!!!	TGACTACAATATTTTTTTTA+AGG	-	chr1_1:25319238-25319257	None:intergenic	15.0%
!!	TTTATATAGATAATTCATCA+AGG	+	chr1_1:25319353-25319372	Msa0015710:intron	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	-	chr1_1:25319433-25319452	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	-	chr1_1:25319434-25319453	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	-	chr1_1:25319468-25319487	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	+	chr1_1:25319741-25319760	Msa0015710:three_prime_UTR	15.0%
!!	ATTTGTGAAAATAAATGATA+GGG	-	chr1_1:25317721-25317740	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	-	chr1_1:25317722-25317741	None:intergenic	15.0%
!!!	CAAACTTTTTTAATAAGAAT+AGG	-	chr1_1:25318733-25318752	None:intergenic	15.0%
!!!	TGACTACAATATTTTTTTTA+AGG	-	chr1_1:25319238-25319257	None:intergenic	15.0%
!!	TTTATATAGATAATTCATCA+AGG	+	chr1_1:25319353-25319372	Msa0015710:intron	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	-	chr1_1:25319433-25319452	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	-	chr1_1:25319434-25319453	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	-	chr1_1:25319468-25319487	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	+	chr1_1:25319741-25319760	Msa0015710:three_prime_UTR	15.0%
!!!	TCTTTTTCCTAAATTTTTCT+TGG	+	chr1_1:25317665-25317684	Msa0015710:five_prime_UTR	20.0%
!!	CAATCTCTATATATTATAGT+AGG	+	chr1_1:25318528-25318547	Msa0015710:intron	20.0%
!!!	TAAAAAGAGTTAGCTTTAAT+AGG	+	chr1_1:25318861-25318880	Msa0015710:intron	20.0%
!!	CTATATAAAGAAAATTACAC+AGG	-	chr1_1:25319342-25319361	None:intergenic	20.0%
!!	CACACAAATTTATTACAAAA+TGG	-	chr1_1:25319671-25319690	None:intergenic	20.0%
!!!	TCTTTTTCCTAAATTTTTCT+TGG	+	chr1_1:25317665-25317684	Msa0015710:five_prime_UTR	20.0%
!!	CAATCTCTATATATTATAGT+AGG	+	chr1_1:25318528-25318547	Msa0015710:intron	20.0%
!!!	TAAAAAGAGTTAGCTTTAAT+AGG	+	chr1_1:25318861-25318880	Msa0015710:intron	20.0%
!!	CTATATAAAGAAAATTACAC+AGG	-	chr1_1:25319342-25319361	None:intergenic	20.0%
!!	CACACAAATTTATTACAAAA+TGG	-	chr1_1:25319671-25319690	None:intergenic	20.0%
!	AGTAGAACCAAGAAAAATTT+AGG	-	chr1_1:25317675-25317694	None:intergenic	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	-	chr1_1:25317716-25317735	None:intergenic	25.0%
!	TTATAGTAGGATGTGATAAT+AGG	+	chr1_1:25318541-25318560	Msa0015710:intron	25.0%
!	TATAGTAGGATGTGATAATA+GGG	+	chr1_1:25318542-25318561	Msa0015710:intron	25.0%
!	ATAGGGATCCAAATATATAT+CGG	+	chr1_1:25318559-25318578	Msa0015710:intron	25.0%
!	TTCATTGACCGATATATATT+TGG	-	chr1_1:25318570-25318589	None:intergenic	25.0%
!	TATATATCGGTCAATGAAAT+AGG	+	chr1_1:25318572-25318591	Msa0015710:intron	25.0%
!!	TTGGTGGCAAAAAAAAAAAA+AGG	+	chr1_1:25318603-25318622	Msa0015710:intron	25.0%
!	AAAAAGGAAATAATTTGAGC+TGG	+	chr1_1:25318619-25318638	Msa0015710:intron	25.0%
!	AAAAGGAAATAATTTGAGCT+GGG	+	chr1_1:25318620-25318639	Msa0015710:intron	25.0%
!	ATATTGAGATTTCCTACATT+GGG	-	chr1_1:25319133-25319152	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	+	chr1_1:25319678-25319697	Msa0015710:three_prime_UTR	25.0%
!	AGTAGAACCAAGAAAAATTT+AGG	-	chr1_1:25317675-25317694	None:intergenic	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	-	chr1_1:25317716-25317735	None:intergenic	25.0%
!	TTATAGTAGGATGTGATAAT+AGG	+	chr1_1:25318541-25318560	Msa0015710:intron	25.0%
!	TATAGTAGGATGTGATAATA+GGG	+	chr1_1:25318542-25318561	Msa0015710:intron	25.0%
!	ATAGGGATCCAAATATATAT+CGG	+	chr1_1:25318559-25318578	Msa0015710:intron	25.0%
!	TTCATTGACCGATATATATT+TGG	-	chr1_1:25318570-25318589	None:intergenic	25.0%
!	TATATATCGGTCAATGAAAT+AGG	+	chr1_1:25318572-25318591	Msa0015710:intron	25.0%
!!	TTGGTGGCAAAAAAAAAAAA+AGG	+	chr1_1:25318603-25318622	Msa0015710:intron	25.0%
!	AAAAAGGAAATAATTTGAGC+TGG	+	chr1_1:25318619-25318638	Msa0015710:intron	25.0%
!	AAAAGGAAATAATTTGAGCT+GGG	+	chr1_1:25318620-25318639	Msa0015710:intron	25.0%
!	ATATTGAGATTTCCTACATT+GGG	-	chr1_1:25319133-25319152	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	+	chr1_1:25319678-25319697	Msa0015710:three_prime_UTR	25.0%
!!	TTTTTCTGATCTAGCTTGAT+TGG	-	chr1_1:25317756-25317775	None:intergenic	30.0%
	GAAGAGAATTCATTGTTACT+TGG	-	chr1_1:25317796-25317815	None:intergenic	30.0%
!!	ATGATGGGTTTGTTATCATA+GGG	-	chr1_1:25317865-25317884	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	-	chr1_1:25317986-25318005	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	+	chr1_1:25317996-25318015	Msa0015710:CDS	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	-	chr1_1:25318117-25318136	None:intergenic	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	-	chr1_1:25318409-25318428	None:intergenic	30.0%
	TAAGAGATACTCGGAAAATT+TGG	-	chr1_1:25318813-25318832	None:intergenic	30.0%
!	AAGAGAGTATAAGAGATACT+CGG	-	chr1_1:25318822-25318841	None:intergenic	30.0%
!	ATAGATACAAGGGTGTAAAT+AGG	+	chr1_1:25318910-25318929	Msa0015710:intron	30.0%
	TATTGAGATTTCCTACATTG+GGG	-	chr1_1:25319132-25319151	None:intergenic	30.0%
	CATATTGAGATTTCCTACAT+TGG	-	chr1_1:25319134-25319153	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	+	chr1_1:25319644-25319663	Msa0015710:three_prime_UTR	30.0%
!!	TTTTTCTGATCTAGCTTGAT+TGG	-	chr1_1:25317756-25317775	None:intergenic	30.0%
	GAAGAGAATTCATTGTTACT+TGG	-	chr1_1:25317796-25317815	None:intergenic	30.0%
!!	ATGATGGGTTTGTTATCATA+GGG	-	chr1_1:25317865-25317884	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	-	chr1_1:25317986-25318005	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	+	chr1_1:25317996-25318015	Msa0015710:CDS	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	-	chr1_1:25318117-25318136	None:intergenic	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	-	chr1_1:25318409-25318428	None:intergenic	30.0%
	TAAGAGATACTCGGAAAATT+TGG	-	chr1_1:25318813-25318832	None:intergenic	30.0%
!	AAGAGAGTATAAGAGATACT+CGG	-	chr1_1:25318822-25318841	None:intergenic	30.0%
!	ATAGATACAAGGGTGTAAAT+AGG	+	chr1_1:25318910-25318929	Msa0015710:intron	30.0%
	TATTGAGATTTCCTACATTG+GGG	-	chr1_1:25319132-25319151	None:intergenic	30.0%
	CATATTGAGATTTCCTACAT+TGG	-	chr1_1:25319134-25319153	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	+	chr1_1:25319644-25319663	Msa0015710:three_prime_UTR	30.0%
!!!	TTTGGTTTTAGAAGCTTGGT+AGG	-	chr1_1:25317698-25317717	None:intergenic	35.0%
	GTTCATCATGTCTTTGTTCT+TGG	-	chr1_1:25317837-25317856	None:intergenic	35.0%
!!	GATGATGGGTTTGTTATCAT+AGG	-	chr1_1:25317866-25317885	None:intergenic	35.0%
!!	TGTTGTAGATGATGATGGTA+TGG	-	chr1_1:25317903-25317922	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	-	chr1_1:25317962-25317981	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	+	chr1_1:25318007-25318026	Msa0015710:CDS	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	-	chr1_1:25318111-25318130	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	+	chr1_1:25318111-25318130	Msa0015710:CDS	35.0%
!	ACTCAGATTTGTCCCTTTTA+TGG	+	chr1_1:25318139-25318158	Msa0015710:CDS	35.0%
	GGATTTGGATGTCCATAAAA+GGG	-	chr1_1:25318154-25318173	None:intergenic	35.0%
	TGGATTTGGATGTCCATAAA+AGG	-	chr1_1:25318155-25318174	None:intergenic	35.0%
!!!	AGAGCTGCTTTTGAAGAAAA+TGG	+	chr1_1:25318241-25318260	Msa0015710:CDS	35.0%
!!	CTGCTTTTGAAGAAAATGGT+GGG	+	chr1_1:25318245-25318264	Msa0015710:CDS	35.0%
	GTAGTTGCATTATTTGATGG+TGG	-	chr1_1:25318406-25318425	None:intergenic	35.0%
!	AATGAAATAGGTTGAGCTGT+TGG	+	chr1_1:25318584-25318603	Msa0015710:intron	35.0%
	AAATGCGTGCATAGATACAA+GGG	+	chr1_1:25318900-25318919	Msa0015710:intron	35.0%
	TAAATAGGAAATTCTGCCCT+TGG	+	chr1_1:25318925-25318944	Msa0015710:intron	35.0%
!!!	TGAATGCAGGTTTTTTCCAA+GGG	-	chr1_1:25318944-25318963	None:intergenic	35.0%
	GTTAGCATATTGAGAGTCAT+TGG	+	chr1_1:25318968-25318987	Msa0015710:intron	35.0%
	GAACGGTTCAAAATTCAAGT+CGG	-	chr1_1:25319054-25319073	None:intergenic	35.0%
	GTCATTGGATTGACATTGAA+CGG	-	chr1_1:25319071-25319090	None:intergenic	35.0%
	CAATGTCAATCCAATGACTT+CGG	+	chr1_1:25319073-25319092	Msa0015710:intron	35.0%
	TCATGAATATCCGAAGTCAT+TGG	-	chr1_1:25319086-25319105	None:intergenic	35.0%
!	CGTCGCGGTTTTTAATATTT+TGG	+	chr1_1:25319190-25319209	Msa0015710:intron	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	+	chr1_1:25319497-25319516	Msa0015710:three_prime_UTR	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	+	chr1_1:25319615-25319634	Msa0015710:three_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	-	chr1_1:25319656-25319675	None:intergenic	35.0%
!!!	TTTGGTTTTAGAAGCTTGGT+AGG	-	chr1_1:25317698-25317717	None:intergenic	35.0%
	GTTCATCATGTCTTTGTTCT+TGG	-	chr1_1:25317837-25317856	None:intergenic	35.0%
!!	GATGATGGGTTTGTTATCAT+AGG	-	chr1_1:25317866-25317885	None:intergenic	35.0%
!!	TGTTGTAGATGATGATGGTA+TGG	-	chr1_1:25317903-25317922	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	-	chr1_1:25317962-25317981	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	+	chr1_1:25318007-25318026	Msa0015710:CDS	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	-	chr1_1:25318111-25318130	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	+	chr1_1:25318111-25318130	Msa0015710:CDS	35.0%
!	ACTCAGATTTGTCCCTTTTA+TGG	+	chr1_1:25318139-25318158	Msa0015710:CDS	35.0%
	GGATTTGGATGTCCATAAAA+GGG	-	chr1_1:25318154-25318173	None:intergenic	35.0%
	TGGATTTGGATGTCCATAAA+AGG	-	chr1_1:25318155-25318174	None:intergenic	35.0%
!!!	AGAGCTGCTTTTGAAGAAAA+TGG	+	chr1_1:25318241-25318260	Msa0015710:CDS	35.0%
!!	CTGCTTTTGAAGAAAATGGT+GGG	+	chr1_1:25318245-25318264	Msa0015710:CDS	35.0%
	GTAGTTGCATTATTTGATGG+TGG	-	chr1_1:25318406-25318425	None:intergenic	35.0%
!	AATGAAATAGGTTGAGCTGT+TGG	+	chr1_1:25318584-25318603	Msa0015710:intron	35.0%
	AAATGCGTGCATAGATACAA+GGG	+	chr1_1:25318900-25318919	Msa0015710:intron	35.0%
	TAAATAGGAAATTCTGCCCT+TGG	+	chr1_1:25318925-25318944	Msa0015710:intron	35.0%
!!!	TGAATGCAGGTTTTTTCCAA+GGG	-	chr1_1:25318944-25318963	None:intergenic	35.0%
	GTTAGCATATTGAGAGTCAT+TGG	+	chr1_1:25318968-25318987	Msa0015710:intron	35.0%
	GAACGGTTCAAAATTCAAGT+CGG	-	chr1_1:25319054-25319073	None:intergenic	35.0%
	GTCATTGGATTGACATTGAA+CGG	-	chr1_1:25319071-25319090	None:intergenic	35.0%
	CAATGTCAATCCAATGACTT+CGG	+	chr1_1:25319073-25319092	Msa0015710:intron	35.0%
	TCATGAATATCCGAAGTCAT+TGG	-	chr1_1:25319086-25319105	None:intergenic	35.0%
!	CGTCGCGGTTTTTAATATTT+TGG	+	chr1_1:25319190-25319209	Msa0015710:intron	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	+	chr1_1:25319497-25319516	Msa0015710:three_prime_UTR	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	+	chr1_1:25319615-25319634	Msa0015710:three_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	-	chr1_1:25319656-25319675	None:intergenic	35.0%
!!!	AGGGTTTGGTTTTAGAAGCT+TGG	-	chr1_1:25317702-25317721	None:intergenic	40.0%
	TCATCGTCATGGATGATGAT+GGG	-	chr1_1:25317880-25317899	None:intergenic	40.0%
	GCTGATGTTGTAGATGATGA+TGG	-	chr1_1:25317908-25317927	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	-	chr1_1:25317959-25317978	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	+	chr1_1:25318212-25318231	Msa0015710:CDS	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+TGG	+	chr1_1:25318244-25318263	Msa0015710:CDS	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	+	chr1_1:25318268-25318287	Msa0015710:CDS	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	+	chr1_1:25318306-25318325	Msa0015710:CDS	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	+	chr1_1:25318328-25318347	Msa0015710:CDS	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	-	chr1_1:25318403-25318422	None:intergenic	40.0%
	AGGAAATAATTTGAGCTGGG+AGG	+	chr1_1:25318623-25318642	Msa0015710:intron	40.0%
	GGAAATAATTTGAGCTGGGA+GGG	+	chr1_1:25318624-25318643	Msa0015710:intron	40.0%
!	AGCTTGCTTCACAAACTCTT+TGG	-	chr1_1:25318650-25318669	None:intergenic	40.0%
	AGAGTTTGTGAAGCAAGCTA+AGG	+	chr1_1:25318651-25318670	Msa0015710:intron	40.0%
	GAGTTTGTGAAGCAAGCTAA+GGG	+	chr1_1:25318652-25318671	Msa0015710:intron	40.0%
	CAAATGCGTGCATAGATACA+AGG	+	chr1_1:25318899-25318918	Msa0015710:intron	40.0%
!!!	GTGAATGCAGGTTTTTTCCA+AGG	-	chr1_1:25318945-25318964	None:intergenic	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	+	chr1_1:25319496-25319515	Msa0015710:intron	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	+	chr1_1:25319614-25319633	Msa0015710:three_prime_UTR	40.0%
!!!	AGGGTTTGGTTTTAGAAGCT+TGG	-	chr1_1:25317702-25317721	None:intergenic	40.0%
	TCATCGTCATGGATGATGAT+GGG	-	chr1_1:25317880-25317899	None:intergenic	40.0%
	GCTGATGTTGTAGATGATGA+TGG	-	chr1_1:25317908-25317927	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	-	chr1_1:25317959-25317978	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	+	chr1_1:25318212-25318231	Msa0015710:CDS	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+TGG	+	chr1_1:25318244-25318263	Msa0015710:CDS	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	+	chr1_1:25318268-25318287	Msa0015710:CDS	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	+	chr1_1:25318306-25318325	Msa0015710:CDS	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	+	chr1_1:25318328-25318347	Msa0015710:CDS	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	-	chr1_1:25318403-25318422	None:intergenic	40.0%
	AGGAAATAATTTGAGCTGGG+AGG	+	chr1_1:25318623-25318642	Msa0015710:intron	40.0%
	GGAAATAATTTGAGCTGGGA+GGG	+	chr1_1:25318624-25318643	Msa0015710:intron	40.0%
!	AGCTTGCTTCACAAACTCTT+TGG	-	chr1_1:25318650-25318669	None:intergenic	40.0%
	AGAGTTTGTGAAGCAAGCTA+AGG	+	chr1_1:25318651-25318670	Msa0015710:intron	40.0%
	GAGTTTGTGAAGCAAGCTAA+GGG	+	chr1_1:25318652-25318671	Msa0015710:intron	40.0%
	CAAATGCGTGCATAGATACA+AGG	+	chr1_1:25318899-25318918	Msa0015710:intron	40.0%
!!!	GTGAATGCAGGTTTTTTCCA+AGG	-	chr1_1:25318945-25318964	None:intergenic	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	+	chr1_1:25319496-25319515	Msa0015710:intron	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	+	chr1_1:25319614-25319633	Msa0015710:three_prime_UTR	40.0%
	GTCATCGTCATGGATGATGA+TGG	-	chr1_1:25317881-25317900	None:intergenic	45.0%
	TGATGGTATGGTCATCGTCA+TGG	-	chr1_1:25317891-25317910	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	-	chr1_1:25317936-25317955	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	-	chr1_1:25317942-25317961	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	-	chr1_1:25318039-25318058	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	-	chr1_1:25318048-25318067	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	-	chr1_1:25318058-25318077	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	+	chr1_1:25318058-25318077	Msa0015710:CDS	45.0%
	CGAGGTAACGCAAGAATTCA+AGG	-	chr1_1:25318093-25318112	None:intergenic	45.0%
	TTGCGTTACCTCGACCAATT+TGG	+	chr1_1:25318100-25318119	Msa0015710:CDS	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	+	chr1_1:25318211-25318230	Msa0015710:CDS	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	-	chr1_1:25318274-25318293	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	+	chr1_1:25318305-25318324	Msa0015710:CDS	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	-	chr1_1:25318397-25318416	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	-	chr1_1:25318400-25318419	None:intergenic	45.0%
!	GAAATAGGTTGAGCTGTTGG+TGG	+	chr1_1:25318587-25318606	Msa0015710:intron	45.0%
	TATGCTAACAGCGTGAATGC+AGG	-	chr1_1:25318957-25318976	None:intergenic	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	-	chr1_1:25319281-25319300	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	+	chr1_1:25319278-25319297	Msa0015710:intron	45.0%
	ACACAGGAGTGAAAGACAAG+CGG	-	chr1_1:25319326-25319345	None:intergenic	45.0%
	CTGCAGTGTGAGATATGCAA+TGG	+	chr1_1:25319524-25319543	Msa0015710:three_prime_UTR	45.0%
	ATGGAAACTGCAGTGAAAGC+TGG	+	chr1_1:25319543-25319562	Msa0015710:three_prime_UTR	45.0%
	TGGAAACTGCAGTGAAAGCT+GGG	+	chr1_1:25319544-25319563	Msa0015710:three_prime_UTR	45.0%
	GTCATCGTCATGGATGATGA+TGG	-	chr1_1:25317881-25317900	None:intergenic	45.0%
	TGATGGTATGGTCATCGTCA+TGG	-	chr1_1:25317891-25317910	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	-	chr1_1:25317936-25317955	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	-	chr1_1:25317942-25317961	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	-	chr1_1:25318039-25318058	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	-	chr1_1:25318048-25318067	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	-	chr1_1:25318058-25318077	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	+	chr1_1:25318058-25318077	Msa0015710:CDS	45.0%
	CGAGGTAACGCAAGAATTCA+AGG	-	chr1_1:25318093-25318112	None:intergenic	45.0%
	TTGCGTTACCTCGACCAATT+TGG	+	chr1_1:25318100-25318119	Msa0015710:CDS	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	+	chr1_1:25318211-25318230	Msa0015710:CDS	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	-	chr1_1:25318274-25318293	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	+	chr1_1:25318305-25318324	Msa0015710:CDS	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	-	chr1_1:25318397-25318416	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	-	chr1_1:25318400-25318419	None:intergenic	45.0%
!	GAAATAGGTTGAGCTGTTGG+TGG	+	chr1_1:25318587-25318606	Msa0015710:intron	45.0%
	TATGCTAACAGCGTGAATGC+AGG	-	chr1_1:25318957-25318976	None:intergenic	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	-	chr1_1:25319281-25319300	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	+	chr1_1:25319278-25319297	Msa0015710:intron	45.0%
	ACACAGGAGTGAAAGACAAG+CGG	-	chr1_1:25319326-25319345	None:intergenic	45.0%
	CTGCAGTGTGAGATATGCAA+TGG	+	chr1_1:25319524-25319543	Msa0015710:three_prime_UTR	45.0%
	ATGGAAACTGCAGTGAAAGC+TGG	+	chr1_1:25319543-25319562	Msa0015710:three_prime_UTR	45.0%
	TGGAAACTGCAGTGAAAGCT+GGG	+	chr1_1:25319544-25319563	Msa0015710:three_prime_UTR	45.0%
	CAACGTGAGAGTGAAAGTGG+TGG	-	chr1_1:25318055-25318074	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	-	chr1_1:25318315-25318334	None:intergenic	50.0%
!	TGCGAGCTTTTCCCCAATGT+AGG	+	chr1_1:25319118-25319137	Msa0015710:intron	50.0%
	TAACAACTGCAACTGCGTCG+CGG	+	chr1_1:25319175-25319194	Msa0015710:intron	50.0%
	CAACGTGAGAGTGAAAGTGG+TGG	-	chr1_1:25318055-25318074	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	-	chr1_1:25318315-25318334	None:intergenic	50.0%
!	TGCGAGCTTTTCCCCAATGT+AGG	+	chr1_1:25319118-25319137	Msa0015710:intron	50.0%
	TAACAACTGCAACTGCGTCG+CGG	+	chr1_1:25319175-25319194	Msa0015710:intron	50.0%
!	GGACATGGTGCAGGTGGATT+TGG	-	chr1_1:25318169-25318188	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	-	chr1_1:25318178-25318197	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	-	chr1_1:25318184-25318203	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	+	chr1_1:25318189-25318208	Msa0015710:CDS	55.0%
	CATCAAGACTACCCCACGCT+TGG	-	chr1_1:25318204-25318223	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	-	chr1_1:25318286-25318305	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	-	chr1_1:25318394-25318413	None:intergenic	55.0%
!	GGACATGGTGCAGGTGGATT+TGG	-	chr1_1:25318169-25318188	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	-	chr1_1:25318178-25318197	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	-	chr1_1:25318184-25318203	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	+	chr1_1:25318189-25318208	Msa0015710:CDS	55.0%
	CATCAAGACTACCCCACGCT+TGG	-	chr1_1:25318204-25318223	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	-	chr1_1:25318286-25318305	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	-	chr1_1:25318394-25318413	None:intergenic	55.0%
	GGACAAGGACATGGTGCAGG+TGG	-	chr1_1:25318175-25318194	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	-	chr1_1:25318190-25318209	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	+	chr1_1:25318188-25318207	Msa0015710:CDS	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	+	chr1_1:25318190-25318209	Msa0015710:CDS	60.0%
	GGACAAGGACATGGTGCAGG+TGG	-	chr1_1:25318175-25318194	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	-	chr1_1:25318190-25318209	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	+	chr1_1:25318188-25318207	Msa0015710:CDS	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	+	chr1_1:25318190-25318209	Msa0015710:CDS	60.0%
	CTACCCCACGCTTGGCGAAG+AGG	-	chr1_1:25318196-25318215	None:intergenic	65.0%
	CTACCCCACGCTTGGCGAAG+AGG	-	chr1_1:25318196-25318215	None:intergenic	65.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	-	chr1_1:25318385-25318404	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	-	chr1_1:25318388-25318407	None:intergenic	75.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	-	chr1_1:25318385-25318404	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	-	chr1_1:25318388-25318407	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	25317635	25319773	25317635	ID=Msa0015710;Name=Msa0015710
chr1_1	mRNA	25317635	25319773	25317635	ID=Msa0015710-mRNA-1;Parent=Msa0015710;Name=Msa0015710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168\|0\|0.5\|1\|0\|0.5\|2\|277\|212
chr1_1	exon	25317635	25318441	25317635	ID=Msa0015710-mRNA-1:exon:8780;Parent=Msa0015710-mRNA-1
chr1_1	exon	25319497	25319773	25319497	ID=Msa0015710-mRNA-1:exon:8781;Parent=Msa0015710-mRNA-1
chr1_1	five_prime_UTR	25317635	25317802	25317635	ID=Msa0015710-mRNA-1:five_prime_utr;Parent=Msa0015710-mRNA-1
chr1_1	CDS	25317803	25318441	25317803	ID=Msa0015710-mRNA-1:cds;Parent=Msa0015710-mRNA-1
chr1_1	three_prime_UTR	25319497	25319773	25319497	ID=Msa0015710-mRNA-1:three_prime_utr;Parent=Msa0015710-mRNA-1

Gene Sequence

>Msa0015710

ATGAATTCTCTTCAAGAATTTGAATCATCAACCAAGAACAAAGACATGATGAACACAAACCCTATGATAACAAACCCATCATCATCCATGACGATGACCATACCATCATCATCTACAACATCAGCATCATCCTCGTCCACAACAACAACATCACCTCCATCAACAACATCAACAACAACACCAAGTAGATACGAGAATCAAAAGAGAAGAGATTGGAACACATTTGGACAATACCTAAGAAACCATAGACCACCACTTTCACTCTCACGTTGTAGTGGAGCTCATGTCCTTGAATTCTTGCGTTACCTCGACCAATTTGGAAAAACAAAGGTTCACACTCAGATTTGTCCCTTTTATGGACATCCAAATCCACCTGCACCATGTCCTTGTCCTCTTCGCCAAGCGTGGGGTAGTCTTGATGCACTCATTGGGAGACTTAGAGCTGCTTTTGAAGAAAATGGTGGGAAGCCAGAAGCTAATCCTTTTGGTGCTCGTGCTGTTCGACTTTACCTTCGCGAAGTTAGGGATTCTCAAGCTAAAGCTAGAGGTATTAGCTATGAGAAAAAGAAGCGCAAGCGTCCGCCTCAGCCGCCACCACCACCACCATCAAATAATGCAACTACAACTGATCTTCACTAG

Protein sequence

>Msa0015710

MNSLQEFESSTKNKDMMNTNPMITNPSSSMTMTIPSSSTTSASSSSTTTTSPPSTTSTTTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPPPPPSNNATTTDLH*