AlfalfaGEDB | Msa0109880

M. sativa cultivar zhongmu-4 / Msa0109880

KEGG: -
GO: -
PFAM: PF04852.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0109880	XP_013467094.1	96.729	214	5	1	1	212	1	214	2.58e-148	421

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0109880	sp\|O82268\|LSH3_ARATH	73.684	190	40	1	5	194	6	185	4.53e-87	259

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0109880	A0A072VGF5	96.729	214	5	1	1	212	1	214	1.23e-148	421

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002930	Msa0109880	0.816713	4.798007e-52	-8.615850e-47
Msa0006980	Msa0109880	0.844203	8.745661e-59	-8.615850e-47
Msa0015710	Msa0109880	0.933874	9.630045e-96	-8.615850e-47
Msa0016120	Msa0109880	0.954397	3.243442e-112	-8.615850e-47
Msa0019600	Msa0109880	0.801851	7.408068e-49	-8.615850e-47
Msa0050040	Msa0109880	0.817319	3.508054e-52	-8.615850e-47
Msa0080990	Msa0109880	0.820553	6.454082e-53	-8.615850e-47
Msa0098440	Msa0109880	0.821843	3.255456e-53	-8.615850e-47
Msa0102990	Msa0109880	0.815965	7.052849e-52	-8.615850e-47
Msa0109880	Msa0124130	0.843625	1.249120e-58	-8.615850e-47
Msa0109880	Msa0141600	0.835215	1.910396e-56	-8.615850e-47
Msa0109880	Msa0147560	0.800407	1.462225e-48	-8.615850e-47
Msa0109880	Msa0149140	0.842983	1.852879e-58	-8.615850e-47
Msa0109880	Msa0156250	0.881462	2.352787e-70	-8.615850e-47
Msa0109880	Msa0203030	0.825800	3.846176e-54	-8.615850e-47
Msa0109880	Msa0212150	0.845212	4.674812e-59	-8.615850e-47
Msa0109880	Msa0215640	0.802899	4.506110e-49	-8.615850e-47
Msa0109880	Msa0219190	0.817443	3.288726e-52	-8.615850e-47
Msa0109880	Msa0221290	0.802184	6.328349e-49	-8.615850e-47
Msa0109880	Msa0239030	0.808308	3.301540e-50	-8.615850e-47
Msa0109880	Msa0252770	0.829710	4.421162e-55	-8.615850e-47
Msa0109880	Msa0289920	0.837105	6.326040e-57	-8.615850e-47
Msa0109880	Msa0298240	0.823507	1.334599e-53	-8.615850e-47
Msa0109880	Msa0306120	0.859822	3.169105e-63	-8.615850e-47
Msa0109880	Msa0316680	0.812551	4.004188e-51	-8.615850e-47
Msa0109880	Msa0322830	0.813565	2.400759e-51	-8.615850e-47
Msa0109880	Msa0322840	0.816671	4.903908e-52	-8.615850e-47
Msa0109880	Msa0322860	0.804417	2.182308e-49	-8.615850e-47
Msa0109880	Msa0329620	0.853916	1.741075e-61	-8.615850e-47
Msa0109880	Msa0337850	0.809202	2.126102e-50	-8.615850e-47
Msa0109880	Msa0343660	0.801838	7.452668e-49	-8.615850e-47
Msa0109880	Msa0359250	0.853898	1.761740e-61	-8.615850e-47
Msa0109880	Msa0373960	0.808712	2.706825e-50	-8.615850e-47
Msa0109880	Msa0392420	0.818320	2.084220e-52	-8.615850e-47
Msa0109880	Msa0392460	0.810277	1.248438e-50	-8.615850e-47
Msa0109880	Msa0406000	0.864021	1.639910e-64	-8.615850e-47
Msa0109880	Msa0418200	0.808161	3.548305e-50	-8.615850e-47
Msa0109880	Msa0424330	0.800078	1.706368e-48	-8.615850e-47
Msa0109880	Msa0424340	0.829052	6.387616e-55	-8.615850e-47
Msa0109880	Msa0424350	0.812948	3.278549e-51	-8.615850e-47
Msa0109880	Msa0436500	0.824094	9.724838e-54	-8.615850e-47
Msa0109880	Msa0451400	0.872230	3.730384e-67	-8.615850e-47
Msa0109880	Msa0464540	0.820074	8.309569e-53	-8.615850e-47
Msa0109880	Msa0469260	0.805720	1.164938e-49	-8.615850e-47
Msa0109880	Msa0487570	0.823024	1.730153e-53	-8.615850e-47
Msa0109880	Msa0487630	0.807803	4.227830e-50	-8.615850e-47
Msa0109880	Msa0492190	0.853843	1.828001e-61	-8.615850e-47
Msa0109880	Msa0535040	0.825864	3.715590e-54	-8.615850e-47
Msa0109880	Msa0537920	0.817407	3.351144e-52	-8.615850e-47
Msa0109880	Msa0538220	0.814192	1.746354e-51	-8.615850e-47
Msa0109880	Msa0591790	0.823614	1.259585e-53	-8.615850e-47
Msa0109880	Msa0594090	0.847562	1.069014e-59	-8.615850e-47
Msa0109880	Msa0641250	0.821016	5.052475e-53	-8.615850e-47
Msa0109880	Msa0641360	0.804845	1.776182e-49	-8.615850e-47
Msa0109880	Msa0669840	0.858490	7.949881e-63	-8.615850e-47
Msa0109880	Msa0707220	0.809116	2.218593e-50	-8.615850e-47
Msa0109880	Msa0725860	0.801748	7.779400e-49	-8.615850e-47
Msa0109880	Msa0739580	0.854582	1.118454e-61	-8.615850e-47
Msa0109880	Msa0747780	0.800207	1.606365e-48	-8.615850e-47
Msa0109880	Msa0748000	0.819995	8.664876e-53	-8.615850e-47
Msa0109880	Msa0764820	0.800711	1.267897e-48	-8.615850e-47
Msa0109880	Msa0782360	0.840143	1.038094e-57	-8.615850e-47
Msa0109880	Msa0823400	0.805784	1.129597e-49	-8.615850e-47
Msa0109880	Msa0828830	0.968408	1.233381e-128	-8.615850e-47
Msa0109880	Msa0860280	0.862022	6.801033e-64	-8.615850e-47
Msa0109880	Msa0867350	0.839716	1.341570e-57	-8.615850e-47
Msa0109880	Msa0885060	0.809054	2.287068e-50	-8.615850e-47
Msa0109880	Msa0898730	0.849605	2.904315e-60	-8.615850e-47
Msa0109880	Msa0905550	0.802285	6.031999e-49	-8.615850e-47
Msa0109880	Msa0929870	0.823106	1.656057e-53	-8.615850e-47
Msa0109880	Msa0936410	0.802505	5.434398e-49	-8.615850e-47
Msa0109880	Msa0999300	0.865364	6.230369e-65	-8.615850e-47
Msa0109880	Msa0999350	0.813544	2.425288e-51	-8.615850e-47
Msa0109880	Msa0999400	0.802384	5.754312e-49	-8.615850e-47
Msa0109880	Msa0999410	0.800725	1.259536e-48	-8.615850e-47
Msa0109880	Msa1001890	0.819409	1.178966e-52	-8.615850e-47
Msa0109880	Msa1016600	0.814832	1.260538e-51	-8.615850e-47
Msa0109880	Msa1037900	0.829158	6.018015e-55	-8.615850e-47
Msa0109880	Msa1037910	0.827375	1.620053e-54	-8.615850e-47
Msa0109880	Msa1041530	0.824675	7.096796e-54	-8.615850e-47
Msa0109880	Msa1042670	0.809853	1.540764e-50	-8.615850e-47
Msa0109880	Msa1081570	0.831364	1.740631e-55	-8.615850e-47
Msa0109880	Msa1123880	0.805227	1.477921e-49	-8.615850e-47
Msa0109880	Msa1127140	0.843975	1.006726e-58	-8.615850e-47
Msa0109880	Msa1129960	0.823754	1.168029e-53	-8.615850e-47
Msa0109880	Msa1129970	0.822437	2.370147e-53	-8.615850e-47
Msa0109880	Msa1145020	0.833874	4.151106e-56	-8.615850e-47
Msa0109880	Msa1166400	0.834060	3.728691e-56	-8.615850e-47
Msa0109880	Msa1176160	0.826341	2.861483e-54	-8.615850e-47
Msa0109880	Msa1200440	0.839231	1.792968e-57	-8.615850e-47
Msa0109880	Msa1201110	0.808444	3.088156e-50	-8.615850e-47
Msa0109880	Msa1201160	0.834540	2.824931e-56	-8.615850e-47
Msa0109880	Msa1228190	0.827708	1.347399e-54	-8.615850e-47
Msa0109880	Msa1233560	0.804498	2.099053e-49	-8.615850e-47
Msa0109880	Msa1271260	0.812853	3.439630e-51	-8.615850e-47
Msa0109880	Msa1294290	0.820853	5.508121e-53	-8.615850e-47
Msa0109880	Msa1305510	0.843365	1.465277e-58	-8.615850e-47
Msa0109880	Msa1307190	0.830429	2.952099e-55	-8.615850e-47
Msa0109880	Msa1316540	0.800278	1.553721e-48	-8.615850e-47
Msa0109880	Msa1339580	0.802724	4.897362e-49	-8.615850e-47
Msa0109880	Msa1355400	0.805703	1.174719e-49	-8.615850e-47
Msa0109880	Msa1356990	0.809345	1.981149e-50	-8.615850e-47
Msa0109880	Msa1379970	0.842895	1.955008e-58	-8.615850e-47
Msa0109880	Msa1406780	0.872556	2.903959e-67	-8.615850e-47
Msa0109880	Msa1420060	0.837644	4.601919e-57	-8.615850e-47
Msa0109880	Msa1421550	0.874069	9.004166e-68	-8.615850e-47
Msa0109880	Msa1431850	0.877788	4.742348e-69	-8.615850e-47
Msa0109880	Msa1435480	0.801847	7.423160e-49	-8.615850e-47
Msa0109880	Msa1461060	0.814251	1.694560e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0109880	MtrunA17_Chr1g0167411	96.729	214	5	1	1	212	1	214	2.37e-152	421
Msa0109880	MtrunA17_Chr1g0187671	90.260	154	15	0	51	204	41	194	4.54e-90	263
Msa0109880	MtrunA17_Chr5g0431211	80.282	142	28	0	53	194	27	168	6.38e-88	258
Msa0109880	MtrunA17_Chr4g0051251	83.704	135	22	0	62	196	45	179	4.79e-87	256
Msa0109880	MtrunA17_Chr7g0261381	74.742	194	48	1	1	193	1	194	7.06e-86	253
Msa0109880	MtrunA17_Chr1g0183761	96.183	131	5	0	63	193	45	175	4.50e-84	248
Msa0109880	MtrunA17_Chr3g0105921	70.760	171	39	2	35	194	3	173	2.31e-76	229
Msa0109880	MtrunA17_Chr2g0325831	71.724	145	41	0	42	186	2	146	3.10e-75	224
Msa0109880	MtrunA17_Chr4g0041141	74.436	133	34	0	54	186	20	152	7.21e-75	223
Msa0109880	MtrunA17_Chr2g0315791	65.644	163	55	1	32	193	1	163	9.95e-74	221
Msa0109880	MtrunA17_Chr2g0283861	72.662	139	38	0	55	193	27	165	5.20e-72	216
Msa0109880	MtrunA17_Chr7g0274631	63.924	158	55	2	38	194	2	158	3.15e-71	214
Msa0109880	MtrunA17_Chr1g0190231	78.378	148	32	0	40	187	17	164	4.67e-71	214
Msa0109880	MtrunA17_Chr8g0379061	72.800	125	34	0	62	186	84	208	7.56e-57	180
Msa0109880	MtrunA17_Chr1g0211641	84.783	46	7	0	56	101	64	109	6.89e-24	91.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0109880	AT2G31160.1	73.684	190	40	1	5	194	6	185	4.60e-88	259
Msa0109880	AT1G07090.1	77.551	147	28	1	49	195	22	163	1.00e-86	254
Msa0109880	AT3G23290.2	95.238	126	6	0	62	187	47	172	5.33e-82	243
Msa0109880	AT5G58500.1	80.741	135	25	1	61	194	17	151	8.27e-82	241
Msa0109880	AT5G28490.1	80.405	148	23	1	45	192	13	154	1.72e-75	226
Msa0109880	AT2G42610.1	77.344	128	29	0	59	186	21	148	9.29e-73	218
Msa0109880	AT2G42610.2	77.344	128	29	0	59	186	21	148	9.29e-73	218
Msa0109880	AT3G04510.1	65.169	178	45	1	15	192	2	162	4.34e-71	215
Msa0109880	AT1G78815.1	62.585	147	55	0	62	208	39	185	9.06e-67	204
Msa0109880	AT4G18610.1	64.138	145	51	1	43	186	17	161	5.03e-64	197
Msa0109880	AT1G16910.1	57.419	155	61	1	37	191	2	151	5.06e-62	191

Find 64 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCATCATGTCTTTGTTCT+TGG	0.227073	1_3:+21923097	None:intergenic
CACACAAATTTATTACAAAA+TGG	0.255478	1_3:+21921264	None:intergenic
TTGCGTTACCTCGACCAATT+TGG	0.269006	1_3:-21922831	Msa0109880:CDS
TGGATTTGGATGTCCATAAA+AGG	0.277270	1_3:+21922779	None:intergenic
CAAAATGGACCGTGAATAAT+TGG	0.289752	1_3:+21921279	None:intergenic
GTTGTTGTTGATGTTGTTGA+TGG	0.314316	1_3:+21922972	None:intergenic
GGACATGGTGCAGGTGGATT+TGG	0.320133	1_3:+21922765	None:intergenic
GACTTTACCTTCGCGAAGTT+AGG	0.323181	1_3:-21922626	Msa0109880:CDS
GATGATGGGTTTGTTATCAT+AGG	0.327393	1_3:+21923068	None:intergenic
TGAAAATAAATGATAGGGTT+TGG	0.339101	1_3:+21923218	None:intergenic
TATTTGTGAAAATAAATGAT+AGG	0.354121	1_3:+21923212	None:intergenic
AAGCCAGAAGCTAATCCTTT+TGG	0.361490	1_3:-21922663	Msa0109880:CDS
AGAAGAGATTGGAACACATT+TGG	0.367128	1_3:-21922924	Msa0109880:CDS
GTGGTGGTCTATGGTTTCTT+AGG	0.368488	1_3:+21922895	None:intergenic
GGTGGTGGTGGTGGCGGCTG+AGG	0.370057	1_3:+21922546	None:intergenic
ACTTTACCTTCGCGAAGTTA+GGG	0.398859	1_3:-21922625	Msa0109880:CDS
GCACCAAAAGGATTAGCTTC+TGG	0.418214	1_3:+21922660	None:intergenic
GTTGTAGTTGCATTATTTGA+TGG	0.419514	1_3:+21922525	None:intergenic
ATTTGTGAAAATAAATGATA+GGG	0.429262	1_3:+21923213	None:intergenic
TAGTAGCAGCAGTAACTAAA+GGG	0.431809	1_3:-21921317	Msa0109880:three_prime_UTR
GGTAGTCTTGATGCACTCAT+TGG	0.434097	1_3:-21922720	Msa0109880:CDS
AGAATCAAAAGAGAAGAGAT+TGG	0.459394	1_3:-21922935	Msa0109880:CDS
CTTGTCCTCTTCGCCAAGCG+TGG	0.459831	1_3:-21922743	Msa0109880:CDS
GGTGGTGGTGGCGGCTGAGG+CGG	0.465046	1_3:+21922549	None:intergenic
GTAGTAGCAGCAGTAACTAA+AGG	0.470487	1_3:-21921318	Msa0109880:three_prime_UTR
GCATTATTTGATGGTGGTGG+TGG	0.471088	1_3:+21922534	None:intergenic
GAAGAGAATTCATTGTTACT+TGG	0.472778	1_3:+21923138	None:intergenic
ATGGAAACTGCAGTGAAAGC+TGG	0.474521	1_3:-21921389	Msa0109880:three_prime_UTR
ATGATGGGTTTGTTATCATA+GGG	0.482921	1_3:+21923069	None:intergenic
TTATTTGATGGTGGTGGTGG+TGG	0.487231	1_3:+21922537	None:intergenic
TTGTCCTCTTCGCCAAGCGT+GGG	0.488923	1_3:-21922742	Msa0109880:CDS
CGAGGTAACGCAAGAATTCA+AGG	0.492274	1_3:+21922841	None:intergenic
AGAGTGAAAGTGGTGGTCTA+TGG	0.493036	1_3:+21922886	None:intergenic
ATAAATTTGTGTGTACTTGA+AGG	0.495736	1_3:-21921254	Msa0109880:three_prime_UTR
GTAGTCTTGATGCACTCATT+GGG	0.507513	1_3:-21922719	Msa0109880:CDS
TTTGTGTGACCAATTATTCA+CGG	0.508487	1_3:-21921288	Msa0109880:three_prime_UTR
TGATGTTGTTGTTGTGGACG+AGG	0.511739	1_3:+21922998	None:intergenic
GTTGCATTATTTGATGGTGG+TGG	0.513644	1_3:+21922531	None:intergenic
CGAACAGCACGAGCACCAAA+AGG	0.514487	1_3:+21922648	None:intergenic
TGGAAACTGCAGTGAAAGCT+GGG	0.516292	1_3:-21921388	Msa0109880:three_prime_UTR
TGGAGGTGATGTTGTTGTTG+TGG	0.519070	1_3:+21922992	None:intergenic
CACGCTTGGCGAAGAGGACA+AGG	0.527749	1_3:+21922744	None:intergenic
GTTGTTGATGTTGTTGATGG+AGG	0.529776	1_3:+21922975	None:intergenic
CTTTCACTCTCACGTTGTAG+TGG	0.531680	1_3:-21922873	Msa0109880:CDS
GGATTTGGATGTCCATAAAA+GGG	0.532805	1_3:+21922780	None:intergenic
CATCAAGACTACCCCACGCT+TGG	0.543485	1_3:+21922730	None:intergenic
GTAGTTGCATTATTTGATGG+TGG	0.544780	1_3:+21922528	None:intergenic
GTCATCGTCATGGATGATGA+TGG	0.559458	1_3:+21923053	None:intergenic
AGAGGACAAGGACATGGTGC+AGG	0.565916	1_3:+21922756	None:intergenic
CTACCCCACGCTTGGCGAAG+AGG	0.567363	1_3:+21922738	None:intergenic
CTACAACGTGAGAGTGAAAG+TGG	0.580478	1_3:+21922876	None:intergenic
GGACAAGGACATGGTGCAGG+TGG	0.588264	1_3:+21922759	None:intergenic
TGTTGTAGATGATGATGGTA+TGG	0.601682	1_3:+21923031	None:intergenic
GCTGATGTTGTAGATGATGA+TGG	0.601848	1_3:+21923026	None:intergenic
TGTCCTCTTCGCCAAGCGTG+GGG	0.612011	1_3:-21922741	Msa0109880:CDS
TGGCGAAGAGGACAAGGACA+TGG	0.629659	1_3:+21922750	None:intergenic
GAAGTCTTGAGATCAGTACA+TGG	0.630606	1_3:-21921436	Msa0109880:three_prime_UTR
TGATGGTATGGTCATCGTCA+TGG	0.630871	1_3:+21923043	None:intergenic
GATTCTCAAGCTAAAGCTAG+AGG	0.638819	1_3:-21922603	Msa0109880:CDS
GAGAATCCCTAACTTCGCGA+AGG	0.649287	1_3:+21922619	None:intergenic
TCATCGTCATGGATGATGAT+GGG	0.650264	1_3:+21923054	None:intergenic
CTGCAGTGTGAGATATGCAA+TGG	0.653802	1_3:-21921408	Msa0109880:three_prime_UTR
AAGTCTTGAGATCAGTACAT+GGG	0.676097	1_3:-21921435	Msa0109880:three_prime_UTR
CAACGTGAGAGTGAAAGTGG+TGG	0.746060	1_3:+21922879	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTGTGAAAATAAATGATA+GGG	+	chr1_3:21921267-21921286	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	+	chr1_3:21921268-21921287	None:intergenic	15.0%
!!!	CAAACTTTTTTAATAAGAAT+AGG	+	chr1_3:21922278-21922297	None:intergenic	15.0%
!!!	TGACTACAATATTTTTTTTA+AGG	+	chr1_3:21922783-21922802	None:intergenic	15.0%
!!	TTTATATAGATAATTCATCA+AGG	-	chr1_3:21922898-21922917	Msa0109880:CDS	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	+	chr1_3:21922978-21922997	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	+	chr1_3:21922979-21922998	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	+	chr1_3:21923013-21923032	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	-	chr1_3:21923286-21923305	Msa0109880:five_prime_UTR	15.0%
!!	ATTTGTGAAAATAAATGATA+GGG	+	chr1_3:21921267-21921286	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	+	chr1_3:21921268-21921287	None:intergenic	15.0%
!!!	CAAACTTTTTTAATAAGAAT+AGG	+	chr1_3:21922278-21922297	None:intergenic	15.0%
!!!	TGACTACAATATTTTTTTTA+AGG	+	chr1_3:21922783-21922802	None:intergenic	15.0%
!!	TTTATATAGATAATTCATCA+AGG	-	chr1_3:21922898-21922917	Msa0109880:CDS	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	+	chr1_3:21922978-21922997	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	+	chr1_3:21922979-21922998	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	+	chr1_3:21923013-21923032	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	-	chr1_3:21923286-21923305	Msa0109880:five_prime_UTR	15.0%
!!!	TCTTTTTCCTAAATTTTTCT+TGG	-	chr1_3:21921211-21921230	Msa0109880:three_prime_UTR	20.0%
!!	CAATCTCTATATATTATAGT+AGG	-	chr1_3:21922074-21922093	Msa0109880:intron	20.0%
!!!	TAAAAAGAGTTAGCTTTAAT+AGG	-	chr1_3:21922406-21922425	Msa0109880:intron	20.0%
!!	CTATATAAAGAAAATTACAC+AGG	+	chr1_3:21922887-21922906	None:intergenic	20.0%
!!	CACACAAATTTATTACAAAA+TGG	+	chr1_3:21923216-21923235	None:intergenic	20.0%
!!!	TCTTTTTCCTAAATTTTTCT+TGG	-	chr1_3:21921211-21921230	Msa0109880:three_prime_UTR	20.0%
!!	CAATCTCTATATATTATAGT+AGG	-	chr1_3:21922074-21922093	Msa0109880:intron	20.0%
!!!	TAAAAAGAGTTAGCTTTAAT+AGG	-	chr1_3:21922406-21922425	Msa0109880:intron	20.0%
!!	CTATATAAAGAAAATTACAC+AGG	+	chr1_3:21922887-21922906	None:intergenic	20.0%
!!	CACACAAATTTATTACAAAA+TGG	+	chr1_3:21923216-21923235	None:intergenic	20.0%
!	AGTAGAACCAAGAAAAATTT+AGG	+	chr1_3:21921221-21921240	None:intergenic	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	+	chr1_3:21921262-21921281	None:intergenic	25.0%
!	TTATAGTAGGATGTGATAAT+AGG	-	chr1_3:21922087-21922106	Msa0109880:intron	25.0%
!	TATAGTAGGATGTGATAATA+GGG	-	chr1_3:21922088-21922107	Msa0109880:intron	25.0%
!	ATAGGGATCCAAATATATAT+CGG	-	chr1_3:21922105-21922124	Msa0109880:intron	25.0%
!	TTCATTGACCGATATATATT+TGG	+	chr1_3:21922116-21922135	None:intergenic	25.0%
!	TATATATCGGTCAATGAAAT+AGG	-	chr1_3:21922118-21922137	Msa0109880:intron	25.0%
!	AAAAAGGAAATAATTTGAGC+TGG	-	chr1_3:21922164-21922183	Msa0109880:intron	25.0%
!	AAAAGGAAATAATTTGAGCT+GGG	-	chr1_3:21922165-21922184	Msa0109880:intron	25.0%
!	ATATTGAGATTTCCTACATT+GGG	+	chr1_3:21922678-21922697	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	-	chr1_3:21923223-21923242	Msa0109880:five_prime_UTR	25.0%
!	AGTAGAACCAAGAAAAATTT+AGG	+	chr1_3:21921221-21921240	None:intergenic	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	+	chr1_3:21921262-21921281	None:intergenic	25.0%
!	TTATAGTAGGATGTGATAAT+AGG	-	chr1_3:21922087-21922106	Msa0109880:intron	25.0%
!	TATAGTAGGATGTGATAATA+GGG	-	chr1_3:21922088-21922107	Msa0109880:intron	25.0%
!	ATAGGGATCCAAATATATAT+CGG	-	chr1_3:21922105-21922124	Msa0109880:intron	25.0%
!	TTCATTGACCGATATATATT+TGG	+	chr1_3:21922116-21922135	None:intergenic	25.0%
!	TATATATCGGTCAATGAAAT+AGG	-	chr1_3:21922118-21922137	Msa0109880:intron	25.0%
!	AAAAAGGAAATAATTTGAGC+TGG	-	chr1_3:21922164-21922183	Msa0109880:intron	25.0%
!	AAAAGGAAATAATTTGAGCT+GGG	-	chr1_3:21922165-21922184	Msa0109880:intron	25.0%
!	ATATTGAGATTTCCTACATT+GGG	+	chr1_3:21922678-21922697	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	-	chr1_3:21923223-21923242	Msa0109880:five_prime_UTR	25.0%
!!	TTTTTCTGATCTAGCTTGAT+TGG	+	chr1_3:21921302-21921321	None:intergenic	30.0%
	GAAGAGAATTCATTGTTACT+TGG	+	chr1_3:21921342-21921361	None:intergenic	30.0%
!!	ATGATGGGTTTGTTATCATA+GGG	+	chr1_3:21921411-21921430	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	+	chr1_3:21921532-21921551	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	-	chr1_3:21921542-21921561	Msa0109880:intron	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	+	chr1_3:21921663-21921682	None:intergenic	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	+	chr1_3:21921955-21921974	None:intergenic	30.0%
!!	GTTGGTGGCAAAAAAAAAAA+AGG	-	chr1_3:21922148-21922167	Msa0109880:intron	30.0%
	TAAGAGATACTCGGAAAATT+TGG	+	chr1_3:21922358-21922377	None:intergenic	30.0%
!	AAGAGAGTATAAGAGATACT+CGG	+	chr1_3:21922367-21922386	None:intergenic	30.0%
!	ATAGATACAAGGGTGTAAAT+AGG	-	chr1_3:21922455-21922474	Msa0109880:intron	30.0%
	TATTGAGATTTCCTACATTG+GGG	+	chr1_3:21922677-21922696	None:intergenic	30.0%
	CATATTGAGATTTCCTACAT+TGG	+	chr1_3:21922679-21922698	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	-	chr1_3:21923189-21923208	Msa0109880:five_prime_UTR	30.0%
!!	TTTTTCTGATCTAGCTTGAT+TGG	+	chr1_3:21921302-21921321	None:intergenic	30.0%
	GAAGAGAATTCATTGTTACT+TGG	+	chr1_3:21921342-21921361	None:intergenic	30.0%
!!	ATGATGGGTTTGTTATCATA+GGG	+	chr1_3:21921411-21921430	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	+	chr1_3:21921532-21921551	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	-	chr1_3:21921542-21921561	Msa0109880:intron	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	+	chr1_3:21921663-21921682	None:intergenic	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	+	chr1_3:21921955-21921974	None:intergenic	30.0%
!!	GTTGGTGGCAAAAAAAAAAA+AGG	-	chr1_3:21922148-21922167	Msa0109880:intron	30.0%
	TAAGAGATACTCGGAAAATT+TGG	+	chr1_3:21922358-21922377	None:intergenic	30.0%
!	AAGAGAGTATAAGAGATACT+CGG	+	chr1_3:21922367-21922386	None:intergenic	30.0%
!	ATAGATACAAGGGTGTAAAT+AGG	-	chr1_3:21922455-21922474	Msa0109880:intron	30.0%
	TATTGAGATTTCCTACATTG+GGG	+	chr1_3:21922677-21922696	None:intergenic	30.0%
	CATATTGAGATTTCCTACAT+TGG	+	chr1_3:21922679-21922698	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	-	chr1_3:21923189-21923208	Msa0109880:five_prime_UTR	30.0%
!!!	TTTGGTTTTAGAAGCTTGGT+AGG	+	chr1_3:21921244-21921263	None:intergenic	35.0%
	GTTCATCATGTCTTTGTTCT+TGG	+	chr1_3:21921383-21921402	None:intergenic	35.0%
!!	GATGATGGGTTTGTTATCAT+AGG	+	chr1_3:21921412-21921431	None:intergenic	35.0%
!!	TGTTGTAGATGATGATGGTA+TGG	+	chr1_3:21921449-21921468	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	+	chr1_3:21921508-21921527	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	-	chr1_3:21921553-21921572	Msa0109880:intron	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	+	chr1_3:21921657-21921676	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	-	chr1_3:21921657-21921676	Msa0109880:intron	35.0%
!	ACTCAGATTTGTCCCTTTTA+TGG	-	chr1_3:21921685-21921704	Msa0109880:intron	35.0%
	GGATTTGGATGTCCATAAAA+GGG	+	chr1_3:21921700-21921719	None:intergenic	35.0%
	TGGATTTGGATGTCCATAAA+AGG	+	chr1_3:21921701-21921720	None:intergenic	35.0%
!!!	AGAGCTGCTTTTGAAGAAAA+TGG	-	chr1_3:21921787-21921806	Msa0109880:intron	35.0%
!!	CTGCTTTTGAAGAAAATGGT+GGG	-	chr1_3:21921791-21921810	Msa0109880:intron	35.0%
	GTAGTTGCATTATTTGATGG+TGG	+	chr1_3:21921952-21921971	None:intergenic	35.0%
!	AATGAAATAGGTTGAGCTGT+TGG	-	chr1_3:21922130-21922149	Msa0109880:intron	35.0%
	AAATGCGTGCATAGATACAA+GGG	-	chr1_3:21922445-21922464	Msa0109880:intron	35.0%
	TAAATAGGAAATTCTGCCCT+TGG	-	chr1_3:21922470-21922489	Msa0109880:intron	35.0%
!!!	TGAATGCAGGTTTTTTCCAA+GGG	+	chr1_3:21922489-21922508	None:intergenic	35.0%
	GTTAGCATATTGAGAGTCAT+TGG	-	chr1_3:21922513-21922532	Msa0109880:CDS	35.0%
	GAACGGTTCAAAATTCAAGT+CGG	+	chr1_3:21922599-21922618	None:intergenic	35.0%
	GTCATTGGATTGACATTGAA+CGG	+	chr1_3:21922616-21922635	None:intergenic	35.0%
	CAATGTCAATCCAATGACTT+CGG	-	chr1_3:21922618-21922637	Msa0109880:CDS	35.0%
	TCATGAATATCCGAAGTCAT+TGG	+	chr1_3:21922631-21922650	None:intergenic	35.0%
!	CGTCGCGGTTTTTAATATTT+TGG	-	chr1_3:21922735-21922754	Msa0109880:CDS	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	-	chr1_3:21923042-21923061	Msa0109880:CDS	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	-	chr1_3:21923160-21923179	Msa0109880:five_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	+	chr1_3:21923201-21923220	None:intergenic	35.0%
!!!	TTTGGTTTTAGAAGCTTGGT+AGG	+	chr1_3:21921244-21921263	None:intergenic	35.0%
	GTTCATCATGTCTTTGTTCT+TGG	+	chr1_3:21921383-21921402	None:intergenic	35.0%
!!	GATGATGGGTTTGTTATCAT+AGG	+	chr1_3:21921412-21921431	None:intergenic	35.0%
!!	TGTTGTAGATGATGATGGTA+TGG	+	chr1_3:21921449-21921468	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	+	chr1_3:21921508-21921527	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	-	chr1_3:21921553-21921572	Msa0109880:intron	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	+	chr1_3:21921657-21921676	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	-	chr1_3:21921657-21921676	Msa0109880:intron	35.0%
!	ACTCAGATTTGTCCCTTTTA+TGG	-	chr1_3:21921685-21921704	Msa0109880:intron	35.0%
	GGATTTGGATGTCCATAAAA+GGG	+	chr1_3:21921700-21921719	None:intergenic	35.0%
	TGGATTTGGATGTCCATAAA+AGG	+	chr1_3:21921701-21921720	None:intergenic	35.0%
!!!	AGAGCTGCTTTTGAAGAAAA+TGG	-	chr1_3:21921787-21921806	Msa0109880:intron	35.0%
!!	CTGCTTTTGAAGAAAATGGT+GGG	-	chr1_3:21921791-21921810	Msa0109880:intron	35.0%
	GTAGTTGCATTATTTGATGG+TGG	+	chr1_3:21921952-21921971	None:intergenic	35.0%
!	AATGAAATAGGTTGAGCTGT+TGG	-	chr1_3:21922130-21922149	Msa0109880:intron	35.0%
	AAATGCGTGCATAGATACAA+GGG	-	chr1_3:21922445-21922464	Msa0109880:intron	35.0%
	TAAATAGGAAATTCTGCCCT+TGG	-	chr1_3:21922470-21922489	Msa0109880:intron	35.0%
!!!	TGAATGCAGGTTTTTTCCAA+GGG	+	chr1_3:21922489-21922508	None:intergenic	35.0%
	GTTAGCATATTGAGAGTCAT+TGG	-	chr1_3:21922513-21922532	Msa0109880:CDS	35.0%
	GAACGGTTCAAAATTCAAGT+CGG	+	chr1_3:21922599-21922618	None:intergenic	35.0%
	GTCATTGGATTGACATTGAA+CGG	+	chr1_3:21922616-21922635	None:intergenic	35.0%
	CAATGTCAATCCAATGACTT+CGG	-	chr1_3:21922618-21922637	Msa0109880:CDS	35.0%
	TCATGAATATCCGAAGTCAT+TGG	+	chr1_3:21922631-21922650	None:intergenic	35.0%
!	CGTCGCGGTTTTTAATATTT+TGG	-	chr1_3:21922735-21922754	Msa0109880:CDS	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	-	chr1_3:21923042-21923061	Msa0109880:CDS	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	-	chr1_3:21923160-21923179	Msa0109880:five_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	+	chr1_3:21923201-21923220	None:intergenic	35.0%
!!!	AGGGTTTGGTTTTAGAAGCT+TGG	+	chr1_3:21921248-21921267	None:intergenic	40.0%
	TCATCGTCATGGATGATGAT+GGG	+	chr1_3:21921426-21921445	None:intergenic	40.0%
	GCTGATGTTGTAGATGATGA+TGG	+	chr1_3:21921454-21921473	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	+	chr1_3:21921505-21921524	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	-	chr1_3:21921758-21921777	Msa0109880:intron	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+TGG	-	chr1_3:21921790-21921809	Msa0109880:intron	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	-	chr1_3:21921814-21921833	Msa0109880:intron	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	-	chr1_3:21921852-21921871	Msa0109880:intron	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	-	chr1_3:21921874-21921893	Msa0109880:intron	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	+	chr1_3:21921949-21921968	None:intergenic	40.0%
	AGGAAATAATTTGAGCTGGG+AGG	-	chr1_3:21922168-21922187	Msa0109880:intron	40.0%
	GGAAATAATTTGAGCTGGGA+GGG	-	chr1_3:21922169-21922188	Msa0109880:intron	40.0%
!	AGCTTGCTTCACAAACTCTT+TGG	+	chr1_3:21922195-21922214	None:intergenic	40.0%
	AGAGTTTGTGAAGCAAGCTA+AGG	-	chr1_3:21922196-21922215	Msa0109880:intron	40.0%
	GAGTTTGTGAAGCAAGCTAA+GGG	-	chr1_3:21922197-21922216	Msa0109880:intron	40.0%
	CAAATGCGTGCATAGATACA+AGG	-	chr1_3:21922444-21922463	Msa0109880:intron	40.0%
!!!	GTGAATGCAGGTTTTTTCCA+AGG	+	chr1_3:21922490-21922509	None:intergenic	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	-	chr1_3:21923041-21923060	Msa0109880:CDS	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	-	chr1_3:21923159-21923178	Msa0109880:five_prime_UTR	40.0%
!!!	AGGGTTTGGTTTTAGAAGCT+TGG	+	chr1_3:21921248-21921267	None:intergenic	40.0%
	TCATCGTCATGGATGATGAT+GGG	+	chr1_3:21921426-21921445	None:intergenic	40.0%
	GCTGATGTTGTAGATGATGA+TGG	+	chr1_3:21921454-21921473	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	+	chr1_3:21921505-21921524	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	-	chr1_3:21921758-21921777	Msa0109880:intron	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+TGG	-	chr1_3:21921790-21921809	Msa0109880:intron	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	-	chr1_3:21921814-21921833	Msa0109880:intron	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	-	chr1_3:21921852-21921871	Msa0109880:intron	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	-	chr1_3:21921874-21921893	Msa0109880:intron	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	+	chr1_3:21921949-21921968	None:intergenic	40.0%
	AGGAAATAATTTGAGCTGGG+AGG	-	chr1_3:21922168-21922187	Msa0109880:intron	40.0%
	GGAAATAATTTGAGCTGGGA+GGG	-	chr1_3:21922169-21922188	Msa0109880:intron	40.0%
!	AGCTTGCTTCACAAACTCTT+TGG	+	chr1_3:21922195-21922214	None:intergenic	40.0%
	AGAGTTTGTGAAGCAAGCTA+AGG	-	chr1_3:21922196-21922215	Msa0109880:intron	40.0%
	GAGTTTGTGAAGCAAGCTAA+GGG	-	chr1_3:21922197-21922216	Msa0109880:intron	40.0%
	CAAATGCGTGCATAGATACA+AGG	-	chr1_3:21922444-21922463	Msa0109880:intron	40.0%
!!!	GTGAATGCAGGTTTTTTCCA+AGG	+	chr1_3:21922490-21922509	None:intergenic	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	-	chr1_3:21923041-21923060	Msa0109880:CDS	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	-	chr1_3:21923159-21923178	Msa0109880:five_prime_UTR	40.0%
	GTCATCGTCATGGATGATGA+TGG	+	chr1_3:21921427-21921446	None:intergenic	45.0%
	TGATGGTATGGTCATCGTCA+TGG	+	chr1_3:21921437-21921456	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	+	chr1_3:21921482-21921501	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	+	chr1_3:21921488-21921507	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	+	chr1_3:21921585-21921604	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	+	chr1_3:21921594-21921613	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	+	chr1_3:21921604-21921623	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	-	chr1_3:21921604-21921623	Msa0109880:intron	45.0%
	CGAGGTAACGCAAGAATTCA+AGG	+	chr1_3:21921639-21921658	None:intergenic	45.0%
	TTGCGTTACCTCGACCAATT+TGG	-	chr1_3:21921646-21921665	Msa0109880:intron	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	-	chr1_3:21921757-21921776	Msa0109880:intron	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	+	chr1_3:21921820-21921839	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	-	chr1_3:21921851-21921870	Msa0109880:intron	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	+	chr1_3:21921943-21921962	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	+	chr1_3:21921946-21921965	None:intergenic	45.0%
!	GAAATAGGTTGAGCTGTTGG+TGG	-	chr1_3:21922133-21922152	Msa0109880:intron	45.0%
	TATGCTAACAGCGTGAATGC+AGG	+	chr1_3:21922502-21922521	None:intergenic	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	+	chr1_3:21922826-21922845	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	-	chr1_3:21922823-21922842	Msa0109880:CDS	45.0%
	ACACAGGAGTGAAAGACAAG+CGG	+	chr1_3:21922871-21922890	None:intergenic	45.0%
	CTGCAGTGTGAGATATGCAA+TGG	-	chr1_3:21923069-21923088	Msa0109880:CDS	45.0%
	ATGGAAACTGCAGTGAAAGC+TGG	-	chr1_3:21923088-21923107	Msa0109880:CDS	45.0%
	TGGAAACTGCAGTGAAAGCT+GGG	-	chr1_3:21923089-21923108	Msa0109880:CDS	45.0%
	GTCATCGTCATGGATGATGA+TGG	+	chr1_3:21921427-21921446	None:intergenic	45.0%
	TGATGGTATGGTCATCGTCA+TGG	+	chr1_3:21921437-21921456	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	+	chr1_3:21921482-21921501	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	+	chr1_3:21921488-21921507	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	+	chr1_3:21921585-21921604	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	+	chr1_3:21921594-21921613	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	+	chr1_3:21921604-21921623	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	-	chr1_3:21921604-21921623	Msa0109880:intron	45.0%
	CGAGGTAACGCAAGAATTCA+AGG	+	chr1_3:21921639-21921658	None:intergenic	45.0%
	TTGCGTTACCTCGACCAATT+TGG	-	chr1_3:21921646-21921665	Msa0109880:intron	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	-	chr1_3:21921757-21921776	Msa0109880:intron	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	+	chr1_3:21921820-21921839	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	-	chr1_3:21921851-21921870	Msa0109880:intron	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	+	chr1_3:21921943-21921962	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	+	chr1_3:21921946-21921965	None:intergenic	45.0%
!	GAAATAGGTTGAGCTGTTGG+TGG	-	chr1_3:21922133-21922152	Msa0109880:intron	45.0%
	TATGCTAACAGCGTGAATGC+AGG	+	chr1_3:21922502-21922521	None:intergenic	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	+	chr1_3:21922826-21922845	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	-	chr1_3:21922823-21922842	Msa0109880:CDS	45.0%
	ACACAGGAGTGAAAGACAAG+CGG	+	chr1_3:21922871-21922890	None:intergenic	45.0%
	CTGCAGTGTGAGATATGCAA+TGG	-	chr1_3:21923069-21923088	Msa0109880:CDS	45.0%
	ATGGAAACTGCAGTGAAAGC+TGG	-	chr1_3:21923088-21923107	Msa0109880:CDS	45.0%
	TGGAAACTGCAGTGAAAGCT+GGG	-	chr1_3:21923089-21923108	Msa0109880:CDS	45.0%
	CAACGTGAGAGTGAAAGTGG+TGG	+	chr1_3:21921601-21921620	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	+	chr1_3:21921861-21921880	None:intergenic	50.0%
!	TGCGAGCTTTTCCCCAATGT+AGG	-	chr1_3:21922663-21922682	Msa0109880:CDS	50.0%
	TAACAACTGCAACTGCGTCG+CGG	-	chr1_3:21922720-21922739	Msa0109880:CDS	50.0%
	CAACGTGAGAGTGAAAGTGG+TGG	+	chr1_3:21921601-21921620	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	+	chr1_3:21921861-21921880	None:intergenic	50.0%
!	TGCGAGCTTTTCCCCAATGT+AGG	-	chr1_3:21922663-21922682	Msa0109880:CDS	50.0%
	TAACAACTGCAACTGCGTCG+CGG	-	chr1_3:21922720-21922739	Msa0109880:CDS	50.0%
!	GGACATGGTGCAGGTGGATT+TGG	+	chr1_3:21921715-21921734	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	+	chr1_3:21921724-21921743	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	+	chr1_3:21921730-21921749	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	-	chr1_3:21921735-21921754	Msa0109880:intron	55.0%
	CATCAAGACTACCCCACGCT+TGG	+	chr1_3:21921750-21921769	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	+	chr1_3:21921832-21921851	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	+	chr1_3:21921940-21921959	None:intergenic	55.0%
!	GGACATGGTGCAGGTGGATT+TGG	+	chr1_3:21921715-21921734	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	+	chr1_3:21921724-21921743	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	+	chr1_3:21921730-21921749	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	-	chr1_3:21921735-21921754	Msa0109880:intron	55.0%
	CATCAAGACTACCCCACGCT+TGG	+	chr1_3:21921750-21921769	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	+	chr1_3:21921832-21921851	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	+	chr1_3:21921940-21921959	None:intergenic	55.0%
	GGACAAGGACATGGTGCAGG+TGG	+	chr1_3:21921721-21921740	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	+	chr1_3:21921736-21921755	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	-	chr1_3:21921734-21921753	Msa0109880:intron	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	-	chr1_3:21921736-21921755	Msa0109880:intron	60.0%
	GGACAAGGACATGGTGCAGG+TGG	+	chr1_3:21921721-21921740	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	+	chr1_3:21921736-21921755	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	-	chr1_3:21921734-21921753	Msa0109880:intron	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	-	chr1_3:21921736-21921755	Msa0109880:intron	60.0%
	CTACCCCACGCTTGGCGAAG+AGG	+	chr1_3:21921742-21921761	None:intergenic	65.0%
	CTACCCCACGCTTGGCGAAG+AGG	+	chr1_3:21921742-21921761	None:intergenic	65.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	+	chr1_3:21921931-21921950	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	+	chr1_3:21921934-21921953	None:intergenic	75.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	+	chr1_3:21921931-21921950	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	+	chr1_3:21921934-21921953	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	21921181	21923318	21921181	ID=Msa0109880;Name=Msa0109880
chr1_3	mRNA	21921181	21923318	21921181	ID=Msa0109880-mRNA-1;Parent=Msa0109880;Name=Msa0109880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168\|0\|0.5\|1\|0\|0.5\|2\|277\|212
chr1_3	exon	21921181	21921457	21921181	ID=Msa0109880-mRNA-1:exon:7872;Parent=Msa0109880-mRNA-1
chr1_3	exon	21922512	21923318	21922512	ID=Msa0109880-mRNA-1:exon:7871;Parent=Msa0109880-mRNA-1
chr1_3	five_prime_UTR	21923151	21923318	21923151	ID=Msa0109880-mRNA-1:five_prime_utr;Parent=Msa0109880-mRNA-1
chr1_3	CDS	21922512	21923150	21922512	ID=Msa0109880-mRNA-1:cds;Parent=Msa0109880-mRNA-1
chr1_3	three_prime_UTR	21921181	21921457	21921181	ID=Msa0109880-mRNA-1:three_prime_utr;Parent=Msa0109880-mRNA-1

Gene Sequence

>Msa0109880

ATGAATTCTCTTCAAGAATTTGAATCATCAACCAAGAACAAAGACATGATGAACACAAACCCTATGATAACAAACCCATCATCATCCATGACGATGACCATACCATCATCATCTACAACATCAGCATCATCCTCGTCCACAACAACAACATCACCTCCATCAACAACATCAACAACAACACCAAGTAGATACGAGAATCAAAAGAGAAGAGATTGGAACACATTTGGACAATACCTAAGAAACCATAGACCACCACTTTCACTCTCACGTTGTAGTGGAGCTCATGTCCTTGAATTCTTGCGTTACCTCGACCAATTTGGAAAAACAAAGGTTCACACTCAGATTTGTCCCTTTTATGGACATCCAAATCCACCTGCACCATGTCCTTGTCCTCTTCGCCAAGCGTGGGGTAGTCTTGATGCACTCATTGGGAGACTTAGAGCTGCTTTTGAAGAAAATGGTGGGAAGCCAGAAGCTAATCCTTTTGGTGCTCGTGCTGTTCGACTTTACCTTCGCGAAGTTAGGGATTCTCAAGCTAAAGCTAGAGGTATTAGCTATGAGAAAAAGAAGCGCAAGCGTCCGCCTCAGCCGCCACCACCACCACCATCAAATAATGCAACTACAACTGATCTTCACTAG

Protein sequence

>Msa0109880

MNSLQEFESSTKNKDMMNTNPMITNPSSSMTMTIPSSSTTSASSSSTTTTSPPSTTSTTTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPPPPPSNNATTTDLH*