AlfalfaGEDB | Msa0828830

M. sativa cultivar zhongmu-4 / Msa0828830

KEGG: -
GO: -
PFAM: PF04852.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0828830	XP_013467094.1	96.729	214	5	1	1	212	1	214	2.58e-148	421

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0828830	sp\|O82268\|LSH3_ARATH	73.684	190	40	1	5	194	6	185	4.53e-87	259

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0828830	A0A072VGF5	96.729	214	5	1	1	212	1	214	1.23e-148	421

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006980	Msa0828830	0.839113	1.924407e-57	-8.615850e-47
Msa0015710	Msa0828830	0.943415	1.254789e-102	-8.615850e-47
Msa0016120	Msa0828830	0.949896	5.013853e-108	-8.615850e-47
Msa0019600	Msa0828830	0.827858	1.240167e-54	-8.615850e-47
Msa0050040	Msa0828830	0.807332	5.322354e-50	-8.615850e-47
Msa0080990	Msa0828830	0.822498	2.294367e-53	-8.615850e-47
Msa0102990	Msa0828830	0.805889	1.073303e-49	-8.615850e-47
Msa0109880	Msa0828830	0.968408	1.233381e-128	-8.615850e-47
Msa0641250	Msa0828830	0.804118	2.518355e-49	-8.615850e-47
Msa0641360	Msa0828830	0.804889	1.739573e-49	-8.615850e-47
Msa0669840	Msa0828830	0.862338	5.441185e-64	-8.615850e-47
Msa0725860	Msa0828830	0.804734	1.873571e-49	-8.615850e-47
Msa0727930	Msa0828830	0.808057	3.733320e-50	-8.615850e-47
Msa0739580	Msa0828830	0.866993	1.898347e-65	-8.615850e-47
Msa0748000	Msa0828830	0.821885	3.182759e-53	-8.615850e-47
Msa0782360	Msa0828830	0.852207	5.369934e-61	-8.615850e-47
Msa0828830	Msa0860280	0.873521	1.378291e-67	-8.615850e-47
Msa0828830	Msa0867350	0.829498	4.978796e-55	-8.615850e-47
Msa0828830	Msa0898730	0.837808	4.177883e-57	-8.615850e-47
Msa0828830	Msa0905970	0.802138	6.468172e-49	-8.615850e-47
Msa0828830	Msa0929870	0.826999	1.992519e-54	-8.615850e-47
Msa0828830	Msa0936410	0.804870	1.755185e-49	-8.615850e-47
Msa0828830	Msa0944760	0.816069	6.688601e-52	-8.615850e-47
Msa0828830	Msa0973250	0.802204	6.267737e-49	-8.615850e-47
Msa0828830	Msa0996270	0.803253	3.808001e-49	-8.615850e-47
Msa0828830	Msa0999300	0.879632	1.063874e-69	-8.615850e-47
Msa0828830	Msa0999350	0.815628	8.385614e-52	-8.615850e-47
Msa0828830	Msa0999360	0.801298	9.617387e-49	-8.615850e-47
Msa0828830	Msa0999400	0.804211	2.409207e-49	-8.615850e-47
Msa0828830	Msa0999410	0.803450	3.466897e-49	-8.615850e-47
Msa0828830	Msa1001890	0.834102	3.639680e-56	-8.615850e-47
Msa0828830	Msa1016600	0.818669	1.737122e-52	-8.615850e-47
Msa0828830	Msa1037900	0.840865	6.722395e-58	-8.615850e-47
Msa0828830	Msa1037910	0.838680	2.489982e-57	-8.615850e-47
Msa0828830	Msa1041530	0.822994	1.758025e-53	-8.615850e-47
Msa0828830	Msa1042670	0.804930	1.704991e-49	-8.615850e-47
Msa0828830	Msa1081570	0.829090	6.251436e-55	-8.615850e-47
Msa0828830	Msa1084520	0.804606	1.993128e-49	-8.615850e-47
Msa0828830	Msa1092020	0.807935	3.964535e-50	-8.615850e-47
Msa0828830	Msa1125810	0.807345	5.290341e-50	-8.615850e-47
Msa0828830	Msa1127140	0.832687	8.199388e-56	-8.615850e-47
Msa0828830	Msa1129960	0.834936	2.246563e-56	-8.615850e-47
Msa0828830	Msa1129970	0.833620	4.802400e-56	-8.615850e-47
Msa0828830	Msa1130010	0.807973	3.891256e-50	-8.615850e-47
Msa0828830	Msa1135380	0.803238	3.834846e-49	-8.615850e-47
Msa0828830	Msa1145020	0.829484	5.015417e-55	-8.615850e-47
Msa0828830	Msa1166400	0.823307	1.486602e-53	-8.615850e-47
Msa0828830	Msa1171310	0.800075	1.708684e-48	-8.615850e-47
Msa0828830	Msa1176160	0.812968	3.246086e-51	-8.615850e-47
Msa0828830	Msa1200440	0.832219	1.070913e-55	-8.615850e-47
Msa0828830	Msa1201160	0.838711	2.445579e-57	-8.615850e-47
Msa0828830	Msa1228190	0.840584	7.963181e-58	-8.615850e-47
Msa0828830	Msa1232730	0.803627	3.185622e-49	-8.615850e-47
Msa0828830	Msa1271260	0.825711	4.038556e-54	-8.615850e-47
Msa0828830	Msa1294290	0.825288	5.086803e-54	-8.615850e-47
Msa0828830	Msa1305510	0.847153	1.384930e-59	-8.615850e-47
Msa0828830	Msa1307190	0.818662	1.743666e-52	-8.615850e-47
Msa0828830	Msa1336780	0.805422	1.345447e-49	-8.615850e-47
Msa0828830	Msa1339580	0.806059	9.885597e-50	-8.615850e-47
Msa0828830	Msa1356990	0.811633	6.350371e-51	-8.615850e-47
Msa0828830	Msa1374550	0.803824	2.899251e-49	-8.615850e-47
Msa0828830	Msa1379970	0.855956	4.452313e-62	-8.615850e-47
Msa0828830	Msa1406780	0.876659	1.171569e-68	-8.615850e-47
Msa0828830	Msa1420060	0.825727	4.002571e-54	-8.615850e-47
Msa0828830	Msa1421550	0.887349	1.542633e-72	-8.615850e-47
Msa0828830	Msa1423460	0.818489	1.908655e-52	-8.615850e-47
Msa0828830	Msa1431850	0.881545	2.195055e-70	-8.615850e-47
Msa0828830	Msa1435480	0.803464	3.443143e-49	-8.615850e-47
Msa0828830	Msa1461060	0.818086	2.355441e-52	-8.615850e-47
Msa0124130	Msa0828830	0.857923	1.171951e-62	-8.615850e-47
Msa0141600	Msa0828830	0.813772	2.161633e-51	-8.615850e-47
Msa0149140	Msa0828830	0.856792	2.531231e-62	-8.615850e-47
Msa0156250	Msa0828830	0.890586	8.619558e-74	-8.615850e-47
Msa0185490	Msa0828830	0.815754	7.860925e-52	-8.615850e-47
Msa0197100	Msa0828830	0.811206	7.863166e-51	-8.615850e-47
Msa0203030	Msa0828830	0.803414	3.526530e-49	-8.615850e-47
Msa0212150	Msa0828830	0.855772	5.041443e-62	-8.615850e-47
Msa0219190	Msa0828830	0.804585	2.012683e-49	-8.615850e-47
Msa0221290	Msa0828830	0.808902	2.464508e-50	-8.615850e-47
Msa0373960	Msa0828830	0.803031	4.231353e-49	-8.615850e-47
Msa0392420	Msa0828830	0.821383	4.157971e-53	-8.615850e-47
Msa0392460	Msa0828830	0.813660	2.287260e-51	-8.615850e-47
Msa0392490	Msa0828830	0.811304	7.484920e-51	-8.615850e-47
Msa0406000	Msa0828830	0.875770	2.371288e-68	-8.615850e-47
Msa0424330	Msa0828830	0.813071	3.081400e-51	-8.615850e-47
Msa0424340	Msa0828830	0.831333	1.771099e-55	-8.615850e-47
Msa0424350	Msa0828830	0.816102	6.576051e-52	-8.615850e-47
Msa0451400	Msa0828830	0.883844	3.179372e-71	-8.615850e-47
Msa0464540	Msa0828830	0.801015	1.098856e-48	-8.615850e-47
Msa0469260	Msa0828830	0.800443	1.437814e-48	-8.615850e-47
Msa0239030	Msa0828830	0.820103	8.187320e-53	-8.615850e-47
Msa0252770	Msa0828830	0.840707	7.392789e-58	-8.615850e-47
Msa0276740	Msa0828830	0.811772	5.923253e-51	-8.615850e-47
Msa0289920	Msa0828830	0.847808	9.146282e-60	-8.615850e-47
Msa0298240	Msa0828830	0.812842	3.459636e-51	-8.615850e-47
Msa0306120	Msa0828830	0.871027	9.338621e-67	-8.615850e-47
Msa0316680	Msa0828830	0.817955	2.520715e-52	-8.615850e-47
Msa0322840	Msa0828830	0.806296	8.814591e-50	-8.615850e-47
Msa0329620	Msa0828830	0.865212	6.954996e-65	-8.615850e-47
Msa0343660	Msa0828830	0.803169	3.963705e-49	-8.615850e-47
Msa0359250	Msa0828830	0.865562	5.395551e-65	-8.615850e-47
Msa0487570	Msa0828830	0.826251	3.004888e-54	-8.615850e-47
Msa0487630	Msa0828830	0.822453	2.349447e-53	-8.615850e-47
Msa0492190	Msa0828830	0.857335	1.750516e-62	-8.615850e-47
Msa0515950	Msa0828830	0.812323	4.492065e-51	-8.615850e-47
Msa0534930	Msa0828830	0.818699	1.710552e-52	-8.615850e-47
Msa0535040	Msa0828830	0.835823	1.340775e-56	-8.615850e-47
Msa0537920	Msa0828830	0.801046	1.083184e-48	-8.615850e-47
Msa0575740	Msa0828830	0.812736	3.648860e-51	-8.615850e-47
Msa0591790	Msa0828830	0.848867	4.660491e-60	-8.615850e-47
Msa0594090	Msa0828830	0.851235	1.013069e-60	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0828830	MtrunA17_Chr1g0167411	96.729	214	5	1	1	212	1	214	2.37e-152	421
Msa0828830	MtrunA17_Chr1g0187671	90.260	154	15	0	51	204	41	194	4.54e-90	263
Msa0828830	MtrunA17_Chr5g0431211	80.282	142	28	0	53	194	27	168	6.38e-88	258
Msa0828830	MtrunA17_Chr4g0051251	83.704	135	22	0	62	196	45	179	4.79e-87	256
Msa0828830	MtrunA17_Chr7g0261381	74.742	194	48	1	1	193	1	194	7.06e-86	253
Msa0828830	MtrunA17_Chr1g0183761	96.183	131	5	0	63	193	45	175	4.50e-84	248
Msa0828830	MtrunA17_Chr3g0105921	70.760	171	39	2	35	194	3	173	2.31e-76	229
Msa0828830	MtrunA17_Chr2g0325831	71.724	145	41	0	42	186	2	146	3.10e-75	224
Msa0828830	MtrunA17_Chr4g0041141	74.436	133	34	0	54	186	20	152	7.21e-75	223
Msa0828830	MtrunA17_Chr2g0315791	65.644	163	55	1	32	193	1	163	9.95e-74	221
Msa0828830	MtrunA17_Chr2g0283861	72.662	139	38	0	55	193	27	165	5.20e-72	216
Msa0828830	MtrunA17_Chr7g0274631	63.924	158	55	2	38	194	2	158	3.15e-71	214
Msa0828830	MtrunA17_Chr1g0190231	78.378	148	32	0	40	187	17	164	4.67e-71	214
Msa0828830	MtrunA17_Chr8g0379061	72.800	125	34	0	62	186	84	208	7.56e-57	180
Msa0828830	MtrunA17_Chr1g0211641	84.783	46	7	0	56	101	64	109	6.89e-24	91.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0828830	AT2G31160.1	73.684	190	40	1	5	194	6	185	4.60e-88	259
Msa0828830	AT1G07090.1	77.551	147	28	1	49	195	22	163	1.00e-86	254
Msa0828830	AT3G23290.2	95.238	126	6	0	62	187	47	172	5.33e-82	243
Msa0828830	AT5G58500.1	80.741	135	25	1	61	194	17	151	8.27e-82	241
Msa0828830	AT5G28490.1	80.405	148	23	1	45	192	13	154	1.72e-75	226
Msa0828830	AT2G42610.1	77.344	128	29	0	59	186	21	148	9.29e-73	218
Msa0828830	AT2G42610.2	77.344	128	29	0	59	186	21	148	9.29e-73	218
Msa0828830	AT3G04510.1	65.169	178	45	1	15	192	2	162	4.34e-71	215
Msa0828830	AT1G78815.1	62.585	147	55	0	62	208	39	185	9.06e-67	204
Msa0828830	AT4G18610.1	64.138	145	51	1	43	186	17	161	5.03e-64	197
Msa0828830	AT1G16910.1	57.419	155	61	1	37	191	2	151	5.06e-62	191

Find 64 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCATCATGTCTTTGTTCT+TGG	0.227073	5_4:+1755862	None:intergenic
CACACAAATTTATTACAAAA+TGG	0.255478	5_4:+1754029	None:intergenic
TTGCGTTACCTCGACCAATT+TGG	0.269006	5_4:-1755596	Msa0828830:CDS
TGGATTTGGATGTCCATAAA+AGG	0.277270	5_4:+1755544	None:intergenic
CAAAATGGACCGTGAATAAT+TGG	0.289752	5_4:+1754044	None:intergenic
GTTGTTGTTGATGTTGTTGA+TGG	0.314316	5_4:+1755737	None:intergenic
GGACATGGTGCAGGTGGATT+TGG	0.320133	5_4:+1755530	None:intergenic
GACTTTACCTTCGCGAAGTT+AGG	0.323181	5_4:-1755391	Msa0828830:CDS
GATGATGGGTTTGTTATCAT+AGG	0.327393	5_4:+1755833	None:intergenic
TGAAAATAAATGATAGGGTT+TGG	0.339101	5_4:+1755983	None:intergenic
TATTTGTGAAAATAAATGAT+AGG	0.354121	5_4:+1755977	None:intergenic
AAGCCAGAAGCTAATCCTTT+TGG	0.361490	5_4:-1755428	Msa0828830:CDS
AGAAGAGATTGGAACACATT+TGG	0.367128	5_4:-1755689	Msa0828830:CDS
GTGGTGGTCTATGGTTTCTT+AGG	0.368488	5_4:+1755660	None:intergenic
GGTGGTGGTGGTGGCGGCTG+AGG	0.370057	5_4:+1755311	None:intergenic
ACTTTACCTTCGCGAAGTTA+GGG	0.398859	5_4:-1755390	Msa0828830:CDS
GCACCAAAAGGATTAGCTTC+TGG	0.418214	5_4:+1755425	None:intergenic
GTTGTAGTTGCATTATTTGA+TGG	0.419514	5_4:+1755290	None:intergenic
ATTTGTGAAAATAAATGATA+GGG	0.429262	5_4:+1755978	None:intergenic
TAGTAGCAGCAGTAACTAAA+GGG	0.431809	5_4:-1754082	Msa0828830:three_prime_UTR
GGTAGTCTTGATGCACTCAT+TGG	0.434097	5_4:-1755485	Msa0828830:CDS
AGAATCAAAAGAGAAGAGAT+TGG	0.459394	5_4:-1755700	Msa0828830:CDS
CTTGTCCTCTTCGCCAAGCG+TGG	0.459831	5_4:-1755508	Msa0828830:CDS
GGTGGTGGTGGCGGCTGAGG+CGG	0.465046	5_4:+1755314	None:intergenic
GTAGTAGCAGCAGTAACTAA+AGG	0.470487	5_4:-1754083	Msa0828830:three_prime_UTR
GCATTATTTGATGGTGGTGG+TGG	0.471088	5_4:+1755299	None:intergenic
GAAGAGAATTCATTGTTACT+TGG	0.472778	5_4:+1755903	None:intergenic
ATGGAAACTGCAGTGAAAGC+TGG	0.474521	5_4:-1754154	Msa0828830:three_prime_UTR
ATGATGGGTTTGTTATCATA+GGG	0.482921	5_4:+1755834	None:intergenic
TTATTTGATGGTGGTGGTGG+TGG	0.487231	5_4:+1755302	None:intergenic
TTGTCCTCTTCGCCAAGCGT+GGG	0.488923	5_4:-1755507	Msa0828830:CDS
CGAGGTAACGCAAGAATTCA+AGG	0.492274	5_4:+1755606	None:intergenic
AGAGTGAAAGTGGTGGTCTA+TGG	0.493036	5_4:+1755651	None:intergenic
ATAAATTTGTGTGTACTTGA+AGG	0.495736	5_4:-1754019	Msa0828830:three_prime_UTR
GTAGTCTTGATGCACTCATT+GGG	0.507513	5_4:-1755484	Msa0828830:CDS
TTTGTGTGACCAATTATTCA+CGG	0.508487	5_4:-1754053	Msa0828830:three_prime_UTR
TGATGTTGTTGTTGTGGACG+AGG	0.511739	5_4:+1755763	None:intergenic
GTTGCATTATTTGATGGTGG+TGG	0.513644	5_4:+1755296	None:intergenic
CGAACAGCACGAGCACCAAA+AGG	0.514487	5_4:+1755413	None:intergenic
TGGAAACTGCAGTGAAAGCT+GGG	0.516292	5_4:-1754153	Msa0828830:three_prime_UTR
TGGAGGTGATGTTGTTGTTG+TGG	0.519070	5_4:+1755757	None:intergenic
CACGCTTGGCGAAGAGGACA+AGG	0.527749	5_4:+1755509	None:intergenic
GTTGTTGATGTTGTTGATGG+AGG	0.529776	5_4:+1755740	None:intergenic
CTTTCACTCTCACGTTGTAG+TGG	0.531680	5_4:-1755638	Msa0828830:CDS
GGATTTGGATGTCCATAAAA+GGG	0.532805	5_4:+1755545	None:intergenic
CATCAAGACTACCCCACGCT+TGG	0.543485	5_4:+1755495	None:intergenic
GTAGTTGCATTATTTGATGG+TGG	0.544780	5_4:+1755293	None:intergenic
GTCATCGTCATGGATGATGA+TGG	0.559458	5_4:+1755818	None:intergenic
AGAGGACAAGGACATGGTGC+AGG	0.565916	5_4:+1755521	None:intergenic
CTACCCCACGCTTGGCGAAG+AGG	0.567363	5_4:+1755503	None:intergenic
CTACAACGTGAGAGTGAAAG+TGG	0.580478	5_4:+1755641	None:intergenic
GGACAAGGACATGGTGCAGG+TGG	0.588264	5_4:+1755524	None:intergenic
TGTTGTAGATGATGATGGTA+TGG	0.601682	5_4:+1755796	None:intergenic
GCTGATGTTGTAGATGATGA+TGG	0.601848	5_4:+1755791	None:intergenic
TGTCCTCTTCGCCAAGCGTG+GGG	0.612011	5_4:-1755506	Msa0828830:CDS
TGGCGAAGAGGACAAGGACA+TGG	0.629659	5_4:+1755515	None:intergenic
GAAGTCTTGAGATCAGTACA+TGG	0.630606	5_4:-1754201	Msa0828830:three_prime_UTR
TGATGGTATGGTCATCGTCA+TGG	0.630871	5_4:+1755808	None:intergenic
GATTCTCAAGCTAAAGCTAG+AGG	0.638819	5_4:-1755368	Msa0828830:CDS
GAGAATCCCTAACTTCGCGA+AGG	0.649287	5_4:+1755384	None:intergenic
TCATCGTCATGGATGATGAT+GGG	0.650264	5_4:+1755819	None:intergenic
CTGCAGTGTGAGATATGCAA+TGG	0.653802	5_4:-1754173	Msa0828830:three_prime_UTR
AAGTCTTGAGATCAGTACAT+GGG	0.676097	5_4:-1754200	Msa0828830:three_prime_UTR
CAACGTGAGAGTGAAAGTGG+TGG	0.746060	5_4:+1755644	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTGTGAAAATAAATGATA+GGG	+	chr5_4:1754032-1754051	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	+	chr5_4:1754033-1754052	None:intergenic	15.0%
!!!	CAAACTTTTTTAATAAGAAT+AGG	+	chr5_4:1755043-1755062	None:intergenic	15.0%
!!!	TGACTACAATATTTTTTTTA+AGG	+	chr5_4:1755548-1755567	None:intergenic	15.0%
!!	TTTATATAGATAATTCATCA+AGG	-	chr5_4:1755663-1755682	Msa0828830:CDS	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	+	chr5_4:1755743-1755762	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	+	chr5_4:1755744-1755763	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	+	chr5_4:1755778-1755797	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	-	chr5_4:1756051-1756070	Msa0828830:five_prime_UTR	15.0%
!!	ATTTGTGAAAATAAATGATA+GGG	+	chr5_4:1754032-1754051	None:intergenic	15.0%
!!	TATTTGTGAAAATAAATGAT+AGG	+	chr5_4:1754033-1754052	None:intergenic	15.0%
!!!	CAAACTTTTTTAATAAGAAT+AGG	+	chr5_4:1755043-1755062	None:intergenic	15.0%
!!!	TGACTACAATATTTTTTTTA+AGG	+	chr5_4:1755548-1755567	None:intergenic	15.0%
!!	TTTATATAGATAATTCATCA+AGG	-	chr5_4:1755663-1755682	Msa0828830:CDS	15.0%
!!!	ATATGTATGCATATATTTTA+GGG	+	chr5_4:1755743-1755762	None:intergenic	15.0%
!!!	TATATGTATGCATATATTTT+AGG	+	chr5_4:1755744-1755763	None:intergenic	15.0%
!!	AACAAATTATAAACAAAGAA+TGG	+	chr5_4:1755778-1755797	None:intergenic	15.0%
!!!	TTTCATGTCTTTTTTATAAA+CGG	-	chr5_4:1756051-1756070	Msa0828830:five_prime_UTR	15.0%
!!!	TCTTTTTCCTAAATTTTTCT+TGG	-	chr5_4:1753976-1753995	Msa0828830:three_prime_UTR	20.0%
!!	CAATCTCTATATATTATAGT+AGG	-	chr5_4:1754839-1754858	Msa0828830:intron	20.0%
!!!	TAAAAAGAGTTAGCTTTAAT+AGG	-	chr5_4:1755171-1755190	Msa0828830:intron	20.0%
!!	CTATATAAAGAAAATTACAC+AGG	+	chr5_4:1755652-1755671	None:intergenic	20.0%
!!	CACACAAATTTATTACAAAA+TGG	+	chr5_4:1755981-1756000	None:intergenic	20.0%
!!!	TCTTTTTCCTAAATTTTTCT+TGG	-	chr5_4:1753976-1753995	Msa0828830:three_prime_UTR	20.0%
!!	CAATCTCTATATATTATAGT+AGG	-	chr5_4:1754839-1754858	Msa0828830:intron	20.0%
!!!	TAAAAAGAGTTAGCTTTAAT+AGG	-	chr5_4:1755171-1755190	Msa0828830:intron	20.0%
!!	CTATATAAAGAAAATTACAC+AGG	+	chr5_4:1755652-1755671	None:intergenic	20.0%
!!	CACACAAATTTATTACAAAA+TGG	+	chr5_4:1755981-1756000	None:intergenic	20.0%
!	AGTAGAACCAAGAAAAATTT+AGG	+	chr5_4:1753986-1754005	None:intergenic	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	+	chr5_4:1754027-1754046	None:intergenic	25.0%
!	TTATAGTAGGATGTGATAAT+AGG	-	chr5_4:1754852-1754871	Msa0828830:intron	25.0%
!	TATAGTAGGATGTGATAATA+GGG	-	chr5_4:1754853-1754872	Msa0828830:intron	25.0%
!	ATAGGGATCCAAATATATAT+CGG	-	chr5_4:1754870-1754889	Msa0828830:intron	25.0%
!	TTCATTGACCGATATATATT+TGG	+	chr5_4:1754881-1754900	None:intergenic	25.0%
!	TATATATCGGTCAATGAAAT+AGG	-	chr5_4:1754883-1754902	Msa0828830:intron	25.0%
!	AAAAAGGAAATAATTTGAGC+TGG	-	chr5_4:1754929-1754948	Msa0828830:intron	25.0%
!	AAAAGGAAATAATTTGAGCT+GGG	-	chr5_4:1754930-1754949	Msa0828830:intron	25.0%
!	ATATTGAGATTTCCTACATT+GGG	+	chr5_4:1755443-1755462	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	-	chr5_4:1755988-1756007	Msa0828830:five_prime_UTR	25.0%
!	AGTAGAACCAAGAAAAATTT+AGG	+	chr5_4:1753986-1754005	None:intergenic	25.0%
!	TGAAAATAAATGATAGGGTT+TGG	+	chr5_4:1754027-1754046	None:intergenic	25.0%
!	TTATAGTAGGATGTGATAAT+AGG	-	chr5_4:1754852-1754871	Msa0828830:intron	25.0%
!	TATAGTAGGATGTGATAATA+GGG	-	chr5_4:1754853-1754872	Msa0828830:intron	25.0%
!	ATAGGGATCCAAATATATAT+CGG	-	chr5_4:1754870-1754889	Msa0828830:intron	25.0%
!	TTCATTGACCGATATATATT+TGG	+	chr5_4:1754881-1754900	None:intergenic	25.0%
!	TATATATCGGTCAATGAAAT+AGG	-	chr5_4:1754883-1754902	Msa0828830:intron	25.0%
!	AAAAAGGAAATAATTTGAGC+TGG	-	chr5_4:1754929-1754948	Msa0828830:intron	25.0%
!	AAAAGGAAATAATTTGAGCT+GGG	-	chr5_4:1754930-1754949	Msa0828830:intron	25.0%
!	ATATTGAGATTTCCTACATT+GGG	+	chr5_4:1755443-1755462	None:intergenic	25.0%
!	ATAAATTTGTGTGTACTTGA+AGG	-	chr5_4:1755988-1756007	Msa0828830:five_prime_UTR	25.0%
!!	TTTTTCTGATCTAGCTTGAT+TGG	+	chr5_4:1754067-1754086	None:intergenic	30.0%
	GAAGAGAATTCATTGTTACT+TGG	+	chr5_4:1754107-1754126	None:intergenic	30.0%
!!	ATGATGGGTTTGTTATCATA+GGG	+	chr5_4:1754176-1754195	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	+	chr5_4:1754297-1754316	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	-	chr5_4:1754307-1754326	Msa0828830:intron	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	+	chr5_4:1754428-1754447	None:intergenic	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	+	chr5_4:1754720-1754739	None:intergenic	30.0%
!!	GTTGGTGGCAAAAAAAAAAA+AGG	-	chr5_4:1754913-1754932	Msa0828830:intron	30.0%
	TAAGAGATACTCGGAAAATT+TGG	+	chr5_4:1755123-1755142	None:intergenic	30.0%
!	AAGAGAGTATAAGAGATACT+CGG	+	chr5_4:1755132-1755151	None:intergenic	30.0%
!	ATAGATACAAGGGTGTAAAT+AGG	-	chr5_4:1755220-1755239	Msa0828830:intron	30.0%
	TATTGAGATTTCCTACATTG+GGG	+	chr5_4:1755442-1755461	None:intergenic	30.0%
	CATATTGAGATTTCCTACAT+TGG	+	chr5_4:1755444-1755463	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	-	chr5_4:1755954-1755973	Msa0828830:five_prime_UTR	30.0%
!!	TTTTTCTGATCTAGCTTGAT+TGG	+	chr5_4:1754067-1754086	None:intergenic	30.0%
	GAAGAGAATTCATTGTTACT+TGG	+	chr5_4:1754107-1754126	None:intergenic	30.0%
!!	ATGATGGGTTTGTTATCATA+GGG	+	chr5_4:1754176-1754195	None:intergenic	30.0%
!!	TTTTGATTCTCGTATCTACT+TGG	+	chr5_4:1754297-1754316	None:intergenic	30.0%
	AGAATCAAAAGAGAAGAGAT+TGG	-	chr5_4:1754307-1754326	Msa0828830:intron	30.0%
!!!	GAACCTTTGTTTTTCCAAAT+TGG	+	chr5_4:1754428-1754447	None:intergenic	30.0%
	GTTGTAGTTGCATTATTTGA+TGG	+	chr5_4:1754720-1754739	None:intergenic	30.0%
!!	GTTGGTGGCAAAAAAAAAAA+AGG	-	chr5_4:1754913-1754932	Msa0828830:intron	30.0%
	TAAGAGATACTCGGAAAATT+TGG	+	chr5_4:1755123-1755142	None:intergenic	30.0%
!	AAGAGAGTATAAGAGATACT+CGG	+	chr5_4:1755132-1755151	None:intergenic	30.0%
!	ATAGATACAAGGGTGTAAAT+AGG	-	chr5_4:1755220-1755239	Msa0828830:intron	30.0%
	TATTGAGATTTCCTACATTG+GGG	+	chr5_4:1755442-1755461	None:intergenic	30.0%
	CATATTGAGATTTCCTACAT+TGG	+	chr5_4:1755444-1755463	None:intergenic	30.0%
	TTTGTGTGACCAATTATTCA+CGG	-	chr5_4:1755954-1755973	Msa0828830:five_prime_UTR	30.0%
!!!	TTTGGTTTTAGAAGCTTGGT+AGG	+	chr5_4:1754009-1754028	None:intergenic	35.0%
	GTTCATCATGTCTTTGTTCT+TGG	+	chr5_4:1754148-1754167	None:intergenic	35.0%
!!	GATGATGGGTTTGTTATCAT+AGG	+	chr5_4:1754177-1754196	None:intergenic	35.0%
!!	TGTTGTAGATGATGATGGTA+TGG	+	chr5_4:1754214-1754233	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	+	chr5_4:1754273-1754292	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	-	chr5_4:1754318-1754337	Msa0828830:intron	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	+	chr5_4:1754422-1754441	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	-	chr5_4:1754422-1754441	Msa0828830:intron	35.0%
!	ACTCAGATTTGTCCCTTTTA+TGG	-	chr5_4:1754450-1754469	Msa0828830:intron	35.0%
	GGATTTGGATGTCCATAAAA+GGG	+	chr5_4:1754465-1754484	None:intergenic	35.0%
	TGGATTTGGATGTCCATAAA+AGG	+	chr5_4:1754466-1754485	None:intergenic	35.0%
!!!	AGAGCTGCTTTTGAAGAAAA+TGG	-	chr5_4:1754552-1754571	Msa0828830:intron	35.0%
!!	CTGCTTTTGAAGAAAATGGT+GGG	-	chr5_4:1754556-1754575	Msa0828830:intron	35.0%
	GTAGTTGCATTATTTGATGG+TGG	+	chr5_4:1754717-1754736	None:intergenic	35.0%
!	AATGAAATAGGTTGAGCTGT+TGG	-	chr5_4:1754895-1754914	Msa0828830:intron	35.0%
	AAATGCGTGCATAGATACAA+GGG	-	chr5_4:1755210-1755229	Msa0828830:intron	35.0%
	TAAATAGGAAATTCTGCCCT+TGG	-	chr5_4:1755235-1755254	Msa0828830:intron	35.0%
!!!	TGAATGCAGGTTTTTTCCAA+GGG	+	chr5_4:1755254-1755273	None:intergenic	35.0%
	GTTAGCATATTGAGAGTCAT+TGG	-	chr5_4:1755278-1755297	Msa0828830:CDS	35.0%
	GAACGGTTCAAAATTCAAGT+CGG	+	chr5_4:1755364-1755383	None:intergenic	35.0%
	GTCATTGGATTGACATTGAA+CGG	+	chr5_4:1755381-1755400	None:intergenic	35.0%
	CAATGTCAATCCAATGACTT+CGG	-	chr5_4:1755383-1755402	Msa0828830:CDS	35.0%
	TCATGAATATCCGAAGTCAT+TGG	+	chr5_4:1755396-1755415	None:intergenic	35.0%
!	CGTCGCGGTTTTTAATATTT+TGG	-	chr5_4:1755500-1755519	Msa0828830:CDS	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	-	chr5_4:1755807-1755826	Msa0828830:CDS	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	-	chr5_4:1755925-1755944	Msa0828830:five_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	+	chr5_4:1755966-1755985	None:intergenic	35.0%
!!!	TTTGGTTTTAGAAGCTTGGT+AGG	+	chr5_4:1754009-1754028	None:intergenic	35.0%
	GTTCATCATGTCTTTGTTCT+TGG	+	chr5_4:1754148-1754167	None:intergenic	35.0%
!!	GATGATGGGTTTGTTATCAT+AGG	+	chr5_4:1754177-1754196	None:intergenic	35.0%
!!	TGTTGTAGATGATGATGGTA+TGG	+	chr5_4:1754214-1754233	None:intergenic	35.0%
!	GTTGTTGTTGATGTTGTTGA+TGG	+	chr5_4:1754273-1754292	None:intergenic	35.0%
	AGAAGAGATTGGAACACATT+TGG	-	chr5_4:1754318-1754337	Msa0828830:intron	35.0%
!!	TTGTTTTTCCAAATTGGTCG+AGG	+	chr5_4:1754422-1754441	None:intergenic	35.0%
	CGACCAATTTGGAAAAACAA+AGG	-	chr5_4:1754422-1754441	Msa0828830:intron	35.0%
!	ACTCAGATTTGTCCCTTTTA+TGG	-	chr5_4:1754450-1754469	Msa0828830:intron	35.0%
	GGATTTGGATGTCCATAAAA+GGG	+	chr5_4:1754465-1754484	None:intergenic	35.0%
	TGGATTTGGATGTCCATAAA+AGG	+	chr5_4:1754466-1754485	None:intergenic	35.0%
!!!	AGAGCTGCTTTTGAAGAAAA+TGG	-	chr5_4:1754552-1754571	Msa0828830:intron	35.0%
!!	CTGCTTTTGAAGAAAATGGT+GGG	-	chr5_4:1754556-1754575	Msa0828830:intron	35.0%
	GTAGTTGCATTATTTGATGG+TGG	+	chr5_4:1754717-1754736	None:intergenic	35.0%
!	AATGAAATAGGTTGAGCTGT+TGG	-	chr5_4:1754895-1754914	Msa0828830:intron	35.0%
	AAATGCGTGCATAGATACAA+GGG	-	chr5_4:1755210-1755229	Msa0828830:intron	35.0%
	TAAATAGGAAATTCTGCCCT+TGG	-	chr5_4:1755235-1755254	Msa0828830:intron	35.0%
!!!	TGAATGCAGGTTTTTTCCAA+GGG	+	chr5_4:1755254-1755273	None:intergenic	35.0%
	GTTAGCATATTGAGAGTCAT+TGG	-	chr5_4:1755278-1755297	Msa0828830:CDS	35.0%
	GAACGGTTCAAAATTCAAGT+CGG	+	chr5_4:1755364-1755383	None:intergenic	35.0%
	GTCATTGGATTGACATTGAA+CGG	+	chr5_4:1755381-1755400	None:intergenic	35.0%
	CAATGTCAATCCAATGACTT+CGG	-	chr5_4:1755383-1755402	Msa0828830:CDS	35.0%
	TCATGAATATCCGAAGTCAT+TGG	+	chr5_4:1755396-1755415	None:intergenic	35.0%
!	CGTCGCGGTTTTTAATATTT+TGG	-	chr5_4:1755500-1755519	Msa0828830:CDS	35.0%
	AAGTCTTGAGATCAGTACAT+GGG	-	chr5_4:1755807-1755826	Msa0828830:CDS	35.0%
	TAGTAGCAGCAGTAACTAAA+GGG	-	chr5_4:1755925-1755944	Msa0828830:five_prime_UTR	35.0%
	CAAAATGGACCGTGAATAAT+TGG	+	chr5_4:1755966-1755985	None:intergenic	35.0%
!!!	AGGGTTTGGTTTTAGAAGCT+TGG	+	chr5_4:1754013-1754032	None:intergenic	40.0%
	TCATCGTCATGGATGATGAT+GGG	+	chr5_4:1754191-1754210	None:intergenic	40.0%
	GCTGATGTTGTAGATGATGA+TGG	+	chr5_4:1754219-1754238	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	+	chr5_4:1754270-1754289	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	-	chr5_4:1754523-1754542	Msa0828830:intron	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+TGG	-	chr5_4:1754555-1754574	Msa0828830:intron	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	-	chr5_4:1754579-1754598	Msa0828830:intron	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	-	chr5_4:1754617-1754636	Msa0828830:intron	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	-	chr5_4:1754639-1754658	Msa0828830:intron	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	+	chr5_4:1754714-1754733	None:intergenic	40.0%
	AGGAAATAATTTGAGCTGGG+AGG	-	chr5_4:1754933-1754952	Msa0828830:intron	40.0%
	GGAAATAATTTGAGCTGGGA+GGG	-	chr5_4:1754934-1754953	Msa0828830:intron	40.0%
!	AGCTTGCTTCACAAACTCTT+TGG	+	chr5_4:1754960-1754979	None:intergenic	40.0%
	AGAGTTTGTGAAGCAAGCTA+AGG	-	chr5_4:1754961-1754980	Msa0828830:intron	40.0%
	GAGTTTGTGAAGCAAGCTAA+GGG	-	chr5_4:1754962-1754981	Msa0828830:intron	40.0%
	CAAATGCGTGCATAGATACA+AGG	-	chr5_4:1755209-1755228	Msa0828830:intron	40.0%
!!!	GTGAATGCAGGTTTTTTCCA+AGG	+	chr5_4:1755255-1755274	None:intergenic	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	-	chr5_4:1755806-1755825	Msa0828830:CDS	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	-	chr5_4:1755924-1755943	Msa0828830:five_prime_UTR	40.0%
!!!	AGGGTTTGGTTTTAGAAGCT+TGG	+	chr5_4:1754013-1754032	None:intergenic	40.0%
	TCATCGTCATGGATGATGAT+GGG	+	chr5_4:1754191-1754210	None:intergenic	40.0%
	GCTGATGTTGTAGATGATGA+TGG	+	chr5_4:1754219-1754238	None:intergenic	40.0%
!	GTTGTTGATGTTGTTGATGG+AGG	+	chr5_4:1754270-1754289	None:intergenic	40.0%
!	GTAGTCTTGATGCACTCATT+GGG	-	chr5_4:1754523-1754542	Msa0828830:intron	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+TGG	-	chr5_4:1754555-1754574	Msa0828830:intron	40.0%
!	AAGCCAGAAGCTAATCCTTT+TGG	-	chr5_4:1754579-1754598	Msa0828830:intron	40.0%
	ACTTTACCTTCGCGAAGTTA+GGG	-	chr5_4:1754617-1754636	Msa0828830:intron	40.0%
	GATTCTCAAGCTAAAGCTAG+AGG	-	chr5_4:1754639-1754658	Msa0828830:intron	40.0%
!!	GTTGCATTATTTGATGGTGG+TGG	+	chr5_4:1754714-1754733	None:intergenic	40.0%
	AGGAAATAATTTGAGCTGGG+AGG	-	chr5_4:1754933-1754952	Msa0828830:intron	40.0%
	GGAAATAATTTGAGCTGGGA+GGG	-	chr5_4:1754934-1754953	Msa0828830:intron	40.0%
!	AGCTTGCTTCACAAACTCTT+TGG	+	chr5_4:1754960-1754979	None:intergenic	40.0%
	AGAGTTTGTGAAGCAAGCTA+AGG	-	chr5_4:1754961-1754980	Msa0828830:intron	40.0%
	GAGTTTGTGAAGCAAGCTAA+GGG	-	chr5_4:1754962-1754981	Msa0828830:intron	40.0%
	CAAATGCGTGCATAGATACA+AGG	-	chr5_4:1755209-1755228	Msa0828830:intron	40.0%
!!!	GTGAATGCAGGTTTTTTCCA+AGG	+	chr5_4:1755255-1755274	None:intergenic	40.0%
	GAAGTCTTGAGATCAGTACA+TGG	-	chr5_4:1755806-1755825	Msa0828830:CDS	40.0%
	GTAGTAGCAGCAGTAACTAA+AGG	-	chr5_4:1755924-1755943	Msa0828830:five_prime_UTR	40.0%
	GTCATCGTCATGGATGATGA+TGG	+	chr5_4:1754192-1754211	None:intergenic	45.0%
	TGATGGTATGGTCATCGTCA+TGG	+	chr5_4:1754202-1754221	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	+	chr5_4:1754247-1754266	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	+	chr5_4:1754253-1754272	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	+	chr5_4:1754350-1754369	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	+	chr5_4:1754359-1754378	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	+	chr5_4:1754369-1754388	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	-	chr5_4:1754369-1754388	Msa0828830:intron	45.0%
	CGAGGTAACGCAAGAATTCA+AGG	+	chr5_4:1754404-1754423	None:intergenic	45.0%
	TTGCGTTACCTCGACCAATT+TGG	-	chr5_4:1754411-1754430	Msa0828830:intron	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	-	chr5_4:1754522-1754541	Msa0828830:intron	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	+	chr5_4:1754585-1754604	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	-	chr5_4:1754616-1754635	Msa0828830:intron	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	+	chr5_4:1754708-1754727	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	+	chr5_4:1754711-1754730	None:intergenic	45.0%
!	GAAATAGGTTGAGCTGTTGG+TGG	-	chr5_4:1754898-1754917	Msa0828830:intron	45.0%
	TATGCTAACAGCGTGAATGC+AGG	+	chr5_4:1755267-1755286	None:intergenic	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	+	chr5_4:1755591-1755610	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	-	chr5_4:1755588-1755607	Msa0828830:CDS	45.0%
	ACACAGGAGTGAAAGACAAG+CGG	+	chr5_4:1755636-1755655	None:intergenic	45.0%
	CTGCAGTGTGAGATATGCAA+TGG	-	chr5_4:1755834-1755853	Msa0828830:CDS	45.0%
	ATGGAAACTGCAGTGAAAGC+TGG	-	chr5_4:1755853-1755872	Msa0828830:CDS	45.0%
	TGGAAACTGCAGTGAAAGCT+GGG	-	chr5_4:1755854-1755873	Msa0828830:CDS	45.0%
	GTCATCGTCATGGATGATGA+TGG	+	chr5_4:1754192-1754211	None:intergenic	45.0%
	TGATGGTATGGTCATCGTCA+TGG	+	chr5_4:1754202-1754221	None:intergenic	45.0%
!	TGATGTTGTTGTTGTGGACG+AGG	+	chr5_4:1754247-1754266	None:intergenic	45.0%
!	TGGAGGTGATGTTGTTGTTG+TGG	+	chr5_4:1754253-1754272	None:intergenic	45.0%
	GTGGTGGTCTATGGTTTCTT+AGG	+	chr5_4:1754350-1754369	None:intergenic	45.0%
	AGAGTGAAAGTGGTGGTCTA+TGG	+	chr5_4:1754359-1754378	None:intergenic	45.0%
	CTACAACGTGAGAGTGAAAG+TGG	+	chr5_4:1754369-1754388	None:intergenic	45.0%
	CTTTCACTCTCACGTTGTAG+TGG	-	chr5_4:1754369-1754388	Msa0828830:intron	45.0%
	CGAGGTAACGCAAGAATTCA+AGG	+	chr5_4:1754404-1754423	None:intergenic	45.0%
	TTGCGTTACCTCGACCAATT+TGG	-	chr5_4:1754411-1754430	Msa0828830:intron	45.0%
!	GGTAGTCTTGATGCACTCAT+TGG	-	chr5_4:1754522-1754541	Msa0828830:intron	45.0%
!!	GCACCAAAAGGATTAGCTTC+TGG	+	chr5_4:1754585-1754604	None:intergenic	45.0%
	GACTTTACCTTCGCGAAGTT+AGG	-	chr5_4:1754616-1754635	Msa0828830:intron	45.0%
!!	TTATTTGATGGTGGTGGTGG+TGG	+	chr5_4:1754708-1754727	None:intergenic	45.0%
!!	GCATTATTTGATGGTGGTGG+TGG	+	chr5_4:1754711-1754730	None:intergenic	45.0%
!	GAAATAGGTTGAGCTGTTGG+TGG	-	chr5_4:1754898-1754917	Msa0828830:intron	45.0%
	TATGCTAACAGCGTGAATGC+AGG	+	chr5_4:1755267-1755286	None:intergenic	45.0%
	CCACAAGATGTAGTTGCGAT+TGG	+	chr5_4:1755591-1755610	None:intergenic	45.0%
	CCAATCGCAACTACATCTTG+TGG	-	chr5_4:1755588-1755607	Msa0828830:CDS	45.0%
	ACACAGGAGTGAAAGACAAG+CGG	+	chr5_4:1755636-1755655	None:intergenic	45.0%
	CTGCAGTGTGAGATATGCAA+TGG	-	chr5_4:1755834-1755853	Msa0828830:CDS	45.0%
	ATGGAAACTGCAGTGAAAGC+TGG	-	chr5_4:1755853-1755872	Msa0828830:CDS	45.0%
	TGGAAACTGCAGTGAAAGCT+GGG	-	chr5_4:1755854-1755873	Msa0828830:CDS	45.0%
	CAACGTGAGAGTGAAAGTGG+TGG	+	chr5_4:1754366-1754385	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	+	chr5_4:1754626-1754645	None:intergenic	50.0%
!	TGCGAGCTTTTCCCCAATGT+AGG	-	chr5_4:1755428-1755447	Msa0828830:CDS	50.0%
	TAACAACTGCAACTGCGTCG+CGG	-	chr5_4:1755485-1755504	Msa0828830:CDS	50.0%
	CAACGTGAGAGTGAAAGTGG+TGG	+	chr5_4:1754366-1754385	None:intergenic	50.0%
	GAGAATCCCTAACTTCGCGA+AGG	+	chr5_4:1754626-1754645	None:intergenic	50.0%
!	TGCGAGCTTTTCCCCAATGT+AGG	-	chr5_4:1755428-1755447	Msa0828830:CDS	50.0%
	TAACAACTGCAACTGCGTCG+CGG	-	chr5_4:1755485-1755504	Msa0828830:CDS	50.0%
!	GGACATGGTGCAGGTGGATT+TGG	+	chr5_4:1754480-1754499	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	+	chr5_4:1754489-1754508	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	+	chr5_4:1754495-1754514	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	-	chr5_4:1754500-1754519	Msa0828830:intron	55.0%
	CATCAAGACTACCCCACGCT+TGG	+	chr5_4:1754515-1754534	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	+	chr5_4:1754597-1754616	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	+	chr5_4:1754705-1754724	None:intergenic	55.0%
!	GGACATGGTGCAGGTGGATT+TGG	+	chr5_4:1754480-1754499	None:intergenic	55.0%
	AGAGGACAAGGACATGGTGC+AGG	+	chr5_4:1754489-1754508	None:intergenic	55.0%
	TGGCGAAGAGGACAAGGACA+TGG	+	chr5_4:1754495-1754514	None:intergenic	55.0%
	TTGTCCTCTTCGCCAAGCGT+GGG	-	chr5_4:1754500-1754519	Msa0828830:intron	55.0%
	CATCAAGACTACCCCACGCT+TGG	+	chr5_4:1754515-1754534	None:intergenic	55.0%
	CGAACAGCACGAGCACCAAA+AGG	+	chr5_4:1754597-1754616	None:intergenic	55.0%
!!	TTTGATGGTGGTGGTGGTGG+CGG	+	chr5_4:1754705-1754724	None:intergenic	55.0%
	GGACAAGGACATGGTGCAGG+TGG	+	chr5_4:1754486-1754505	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	+	chr5_4:1754501-1754520	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	-	chr5_4:1754499-1754518	Msa0828830:intron	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	-	chr5_4:1754501-1754520	Msa0828830:intron	60.0%
	GGACAAGGACATGGTGCAGG+TGG	+	chr5_4:1754486-1754505	None:intergenic	60.0%
	CACGCTTGGCGAAGAGGACA+AGG	+	chr5_4:1754501-1754520	None:intergenic	60.0%
	CTTGTCCTCTTCGCCAAGCG+TGG	-	chr5_4:1754499-1754518	Msa0828830:intron	60.0%
	TGTCCTCTTCGCCAAGCGTG+GGG	-	chr5_4:1754501-1754520	Msa0828830:intron	60.0%
	CTACCCCACGCTTGGCGAAG+AGG	+	chr5_4:1754507-1754526	None:intergenic	65.0%
	CTACCCCACGCTTGGCGAAG+AGG	+	chr5_4:1754507-1754526	None:intergenic	65.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	+	chr5_4:1754696-1754715	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	+	chr5_4:1754699-1754718	None:intergenic	75.0%
!!	GGTGGTGGTGGCGGCTGAGG+CGG	+	chr5_4:1754696-1754715	None:intergenic	75.0%
!!	GGTGGTGGTGGTGGCGGCTG+AGG	+	chr5_4:1754699-1754718	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	1753946	1756083	1753946	ID=Msa0828830;Name=Msa0828830
chr5_4	mRNA	1753946	1756083	1753946	ID=Msa0828830-mRNA-1;Parent=Msa0828830;Name=Msa0828830-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168\|0\|0.5\|1\|0\|0.5\|2\|277\|212
chr5_4	exon	1753946	1754222	1753946	ID=Msa0828830-mRNA-1:exon:439;Parent=Msa0828830-mRNA-1
chr5_4	exon	1755277	1756083	1755277	ID=Msa0828830-mRNA-1:exon:438;Parent=Msa0828830-mRNA-1
chr5_4	five_prime_UTR	1755916	1756083	1755916	ID=Msa0828830-mRNA-1:five_prime_utr;Parent=Msa0828830-mRNA-1
chr5_4	CDS	1755277	1755915	1755277	ID=Msa0828830-mRNA-1:cds;Parent=Msa0828830-mRNA-1
chr5_4	three_prime_UTR	1753946	1754222	1753946	ID=Msa0828830-mRNA-1:three_prime_utr;Parent=Msa0828830-mRNA-1

Gene Sequence

>Msa0828830

ATGAATTCTCTTCAAGAATTTGAATCATCAACCAAGAACAAAGACATGATGAACACAAACCCTATGATAACAAACCCATCATCATCCATGACGATGACCATACCATCATCATCTACAACATCAGCATCATCCTCGTCCACAACAACAACATCACCTCCATCAACAACATCAACAACAACACCAAGTAGATACGAGAATCAAAAGAGAAGAGATTGGAACACATTTGGACAATACCTAAGAAACCATAGACCACCACTTTCACTCTCACGTTGTAGTGGAGCTCATGTCCTTGAATTCTTGCGTTACCTCGACCAATTTGGAAAAACAAAGGTTCACACTCAGATTTGTCCCTTTTATGGACATCCAAATCCACCTGCACCATGTCCTTGTCCTCTTCGCCAAGCGTGGGGTAGTCTTGATGCACTCATTGGGAGACTTAGAGCTGCTTTTGAAGAAAATGGTGGGAAGCCAGAAGCTAATCCTTTTGGTGCTCGTGCTGTTCGACTTTACCTTCGCGAAGTTAGGGATTCTCAAGCTAAAGCTAGAGGTATTAGCTATGAGAAAAAGAAGCGCAAGCGTCCGCCTCAGCCGCCACCACCACCACCATCAAATAATGCAACTACAACTGATCTTCACTAG

Protein sequence

>Msa0828830

MNSLQEFESSTKNKDMMNTNPMITNPSSSMTMTIPSSSTTSASSSSTTTTSPPSTTSTTTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPPPPPSNNATTTDLH*