AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1143260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1143260 MtrunA17_Chr5g0403641 85.598 493 43 1 1 493 53 517 0.0 867
Msa1143260 MtrunA17_Chr8g0370941 46.407 487 238 12 6 476 7 486 5.01e-139 410
Msa1143260 MtrunA17_Chr7g0232341 41.322 484 261 13 2 479 1 467 3.54e-109 332
Msa1143260 MtrunA17_Chr7g0275511 40.466 472 260 10 9 475 17 472 1.79e-107 328
Msa1143260 MtrunA17_Chr8g0347281 40.299 469 257 11 10 475 21 469 3.27e-107 327
Msa1143260 MtrunA17_Chr8g0347271 39.316 468 263 9 10 475 22 470 1.53e-105 323
Msa1143260 MtrunA17_Chr7g0232331 39.419 482 273 11 2 479 1 467 1.14e-104 320
Msa1143260 MtrunA17_Chr7g0232391 39.293 481 274 11 2 479 1 466 2.78e-101 311
Msa1143260 MtrunA17_Chr7g0232411 38.716 483 278 11 2 481 1 468 6.79e-101 311
Msa1143260 MtrunA17_Chr8g0335141 36.495 485 276 13 1 475 3 465 3.79e-100 309
Msa1143260 MtrunA17_Chr8g0335161 36.983 484 274 13 2 475 1 463 1.67e-99 307
Msa1143260 MtrunA17_Chr6g0459311 36.420 486 284 12 2 481 8 474 6.39e-99 306
Msa1143260 MtrunA17_Chr8g0336741 36.611 478 280 11 3 475 9 468 1.09e-97 303
Msa1143260 MtrunA17_Chr6g0486251 36.117 479 283 11 2 475 1 461 5.90e-97 300
Msa1143260 MtrunA17_Chr6g0486201 36.117 479 283 11 2 475 1 461 5.90e-97 300
Msa1143260 MtrunA17_Chr8g0334861 38.116 467 269 14 4 467 3 452 2.09e-94 294
Msa1143260 MtrunA17_Chr8g0336651 38.285 478 274 12 4 475 778 1240 3.41e-94 310
Msa1143260 MtrunA17_Chr8g0336651 35.208 480 286 11 2 475 1 461 9.51e-81 273
Msa1143260 MtrunA17_Chr8g0336651 36.749 283 131 5 196 474 532 770 1.03e-47 177
Msa1143260 MtrunA17_Chr1g0153451 35.185 486 295 10 2 484 1 469 1.85e-92 289
Msa1143260 MtrunA17_Chr8g0336691 38.136 472 275 10 7 475 919 1376 3.26e-90 300
Msa1143260 MtrunA17_Chr8g0336691 36.134 476 257 12 4 475 477 909 1.56e-82 278
Msa1143260 MtrunA17_Chr8g0336691 34.801 477 294 8 1 474 7 469 3.77e-82 277
Msa1143260 MtrunA17_Chr7g0232311 35.565 478 284 14 2 474 1 459 6.38e-89 280
Msa1143260 MtrunA17_Chr8g0373301 35.294 476 282 13 6 475 8 463 2.07e-88 278
Msa1143260 MtrunA17_Chr7g0232401 34.568 486 292 11 2 479 1 468 3.35e-88 278
Msa1143260 MtrunA17_Chr8g0336731 36.052 466 277 10 14 474 37 486 3.60e-88 279
Msa1143260 MtrunA17_Chr8g0334851 34.864 479 288 12 5 475 4 466 4.84e-88 278
Msa1143260 MtrunA17_Chr8g0339451 36.256 422 252 8 61 475 49 460 1.67e-86 273
Msa1143260 MtrunA17_Chr8g0361371 34.483 493 277 16 1 474 1 466 2.58e-86 273
Msa1143260 MtrunA17_Chr6g0449931 35.356 478 293 8 5 479 4 468 5.22e-86 272
Msa1143260 MtrunA17_Chr8g0339461 34.029 479 292 11 2 471 1 464 5.53e-85 270
Msa1143260 MtrunA17_Chr8g0339441 34.774 486 253 11 2 479 1 430 4.19e-83 263
Msa1143260 MtrunA17_Chr8g0339631 34.884 473 285 10 2 467 1 457 9.42e-83 264
Msa1143260 MtrunA17_Chr7g0232351 39.695 393 218 11 2 390 1 378 3.38e-81 257
Msa1143260 MtrunA17_Chr6g0462531 33.400 500 266 12 5 476 2 462 8.88e-80 256
Msa1143260 MtrunA17_Chr8g0334831 33.888 481 264 15 2 455 1 454 1.49e-79 256
Msa1143260 MtrunA17_Chr6g0462571 34.672 473 275 11 5 467 2 450 6.69e-76 246
Msa1143260 MtrunA17_Chr3g0079731 33.333 498 299 11 4 483 3 485 9.11e-74 241
Msa1143260 MtrunA17_Chr6g0462521 33.678 484 272 11 5 476 2 448 6.91e-72 235
Msa1143260 MtrunA17_Chr8g0339601 39.159 309 182 4 147 454 3 306 9.05e-72 231
Msa1143260 MtrunA17_Chr6g0462541 34.968 469 273 10 9 467 6 452 3.05e-71 234
Msa1143260 MtrunA17_Chr6g0462551 32.489 474 287 9 5 467 2 453 1.76e-68 227
Msa1143260 MtrunA17_Chr5g0448521 31.470 483 286 15 4 468 2 457 4.84e-67 223
Msa1143260 MtrunA17_Chr5g0442541 31.828 487 289 14 4 474 2 461 7.33e-67 222
Msa1143260 MtrunA17_Chr5g0442491 31.470 483 291 16 4 467 2 463 1.01e-62 211
Msa1143260 MtrunA17_Chr5g0442581 32.193 497 285 17 4 474 2 472 1.10e-62 213
Msa1143260 MtrunA17_Chr5g0442601 31.893 486 289 16 4 468 401 865 1.43e-62 219
Msa1143260 MtrunA17_Chr5g0442601 34.754 305 160 10 114 413 63 333 6.09e-40 154
Msa1143260 MtrunA17_Chr2g0302991 31.489 470 260 13 5 449 3 435 8.67e-62 209
Msa1143260 MtrunA17_Chr5g0442521 31.034 493 295 16 4 474 2 471 5.65e-61 207
Msa1143260 MtrunA17_Chr5g0442511 30.398 477 281 14 4 468 46 483 7.64e-61 207
Msa1143260 MtrunA17_Chr5g0442561 30.488 492 296 16 4 474 2 468 1.14e-59 203
Msa1143260 MtrunA17_Chr1g0153461 45.455 220 115 2 265 484 4 218 1.38e-59 195
Msa1143260 MtrunA17_Chr5g0429711 30.629 493 287 18 2 477 6 460 5.19e-59 201
Msa1143260 MtrunA17_Chr2g0302961 30.550 491 294 16 5 477 3 464 6.77e-58 198
Msa1143260 MtrunA17_Chr5g0429681 30.689 479 259 18 2 449 39 475 5.12e-56 194
Msa1143260 MtrunA17_Chr5g0440421 31.538 520 272 16 4 477 7 488 4.74e-53 186
Msa1143260 MtrunA17_Chr4g0044511 30.495 505 284 22 3 477 36 503 1.37e-47 172
Msa1143260 MtrunA17_Chr2g0329111 29.388 490 268 18 2 455 1 448 1.41e-45 166
Msa1143260 MtrunA17_Chr5g0420801 30.063 479 259 19 1 450 1 432 2.92e-45 164
Msa1143260 MtrunA17_Chr4g0042931 29.577 497 293 17 1 476 1 461 3.99e-44 161
Msa1143260 MtrunA17_Chr8g0366391 28.376 511 305 13 3 484 5 483 2.39e-43 160
Msa1143260 MtrunA17_Chr8g0382021 37.500 240 137 5 210 447 229 457 3.19e-43 159
Msa1143260 MtrunA17_Chr7g0243681 35.106 282 152 7 211 479 217 480 3.62e-43 159
Msa1143260 MtrunA17_Chr1g0159551 38.028 213 123 3 242 454 232 435 1.34e-42 157
Msa1143260 MtrunA17_Chr5g0419761 28.711 512 296 18 3 477 5 484 2.02e-42 157
Msa1143260 MtrunA17_Chr7g0243801 27.255 510 297 20 1 474 1 472 2.68e-42 157
Msa1143260 MtrunA17_Chr4g0050341 27.647 510 291 18 1 471 13 483 3.97e-42 156
Msa1143260 MtrunA17_Chr4g0044521 28.081 495 285 18 15 478 17 471 4.88e-42 155
Msa1143260 MtrunA17_Chr1g0173121 39.437 213 119 4 242 454 236 438 5.98e-42 155
Msa1143260 MtrunA17_Chr7g0265101 29.320 515 296 21 1 477 1 485 1.51e-41 155
Msa1143260 MtrunA17_Chr7g0243771 26.984 504 294 20 7 474 6 471 1.56e-41 155
Msa1143260 MtrunA17_Chr4g0014061 28.175 504 280 18 15 483 17 473 1.60e-41 154
Msa1143260 MtrunA17_Chr6g0464921 27.677 495 289 15 7 480 11 457 2.90e-41 153
Msa1143260 MtrunA17_Chr3g0079711 40.212 189 105 3 291 476 3 186 2.95e-41 146
Msa1143260 MtrunA17_Chr8g0361411 28.743 501 275 15 5 477 6 452 3.88e-41 153
Msa1143260 MtrunA17_Chr6g0464881 28.571 504 280 18 3 480 7 456 5.16e-41 153
Msa1143260 MtrunA17_Chr7g0243781 37.662 231 117 4 261 479 261 476 6.45e-41 153
Msa1143260 MtrunA17_Chr7g0235051 29.077 509 260 19 1 471 1 446 2.96e-40 151
Msa1143260 MtrunA17_Chr4g0032331 28.024 496 288 20 1 476 1 447 4.63e-40 150
Msa1143260 MtrunA17_Chr7g0217881 26.587 504 302 15 1 480 4 463 7.55e-40 150
Msa1143260 MtrunA17_Chr7g0243871 35.036 274 148 6 211 474 215 468 8.01e-40 150
Msa1143260 MtrunA17_Chr3g0118701 27.360 519 302 19 2 486 10 487 1.09e-39 149
Msa1143260 MtrunA17_Chr8g0365811 26.531 490 309 14 9 477 497 956 1.10e-39 153
Msa1143260 MtrunA17_Chr8g0365811 27.632 456 273 15 9 438 11 435 6.39e-36 142
Msa1143260 MtrunA17_Chr3g0112771 35.439 285 145 8 195 471 190 443 1.48e-39 149
Msa1143260 MtrunA17_Chr4g0011051 27.096 513 301 15 5 477 7 486 1.58e-39 149
Msa1143260 MtrunA17_Chr6g0454341 24.852 507 317 14 1 477 4 476 1.75e-39 149
Msa1143260 MtrunA17_Chr6g0454301 25.941 505 314 14 1 477 257 729 1.82e-39 152
Msa1143260 MtrunA17_Chr6g0454301 31.301 246 137 6 242 477 5 228 3.25e-31 127
Msa1143260 MtrunA17_Chr3g0078841 26.336 524 302 19 1 485 4 482 2.46e-39 149
Msa1143260 MtrunA17_Chr6g0454151 33.673 294 156 8 197 480 215 479 2.64e-39 148
Msa1143260 MtrunA17_Chr8g0359821 25.933 509 317 14 4 484 7 483 3.66e-39 148
Msa1143260 MtrunA17_Chr6g0454321 25.352 497 299 14 1 463 4 462 3.68e-39 150
Msa1143260 MtrunA17_Chr4g0042891 34.602 289 156 9 200 484 201 460 6.01e-39 147
Msa1143260 MtrunA17_Chr5g0423981 27.163 497 291 17 1 480 4 446 7.27e-39 147
Msa1143260 MtrunA17_Chr5g0431401 27.160 486 291 18 7 477 10 447 8.33e-39 146
Msa1143260 MtrunA17_Chr6g0464841 27.673 477 259 18 7 454 11 430 1.04e-38 146
Msa1143260 MtrunA17_Chr3g0118671 28.125 512 286 24 2 474 1 469 1.10e-38 147
Msa1143260 MtrunA17_Chr5g0426431 28.402 507 287 19 6 477 11 476 1.13e-38 147
Msa1143260 MtrunA17_Chr2g0278711 27.148 512 301 19 3 481 7 479 1.54e-38 146
Msa1143260 MtrunA17_Chr3g0118691 27.344 512 296 19 2 477 10 481 1.60e-38 146
Msa1143260 MtrunA17_Chr3g0092641 27.579 504 293 19 7 477 12 476 2.28e-38 146
Msa1143260 MtrunA17_Chr1g0161351 25.567 485 322 11 7 477 37 496 2.55e-38 146
Msa1143260 MtrunA17_Chr3g0098111 25.866 491 313 13 7 477 9 468 4.77e-38 145
Msa1143260 MtrunA17_Chr7g0265141 35.986 289 142 9 207 474 214 480 6.10e-38 145
Msa1143260 MtrunA17_Chr5g0414321 27.386 482 291 13 3 470 7 443 1.11e-37 144
Msa1143260 MtrunA17_Chr5g0414331 28.221 489 278 17 3 470 9 445 1.44e-37 143
Msa1143260 MtrunA17_Chr7g0218311 33.108 296 162 9 206 479 209 490 1.55e-37 144
Msa1143260 MtrunA17_Chr4g0044481 39.367 221 104 5 201 413 199 397 1.90e-37 142
Msa1143260 MtrunA17_Chr6g0464871 29.218 486 256 19 7 463 23 449 2.54e-37 142
Msa1143260 MtrunA17_Chr6g0454191 26.796 515 296 20 3 477 6 479 2.74e-37 143
Msa1143260 MtrunA17_Chr3g0118721 31.541 279 149 8 212 477 39 288 2.76e-37 139
Msa1143260 MtrunA17_Chr6g0454201 32.441 299 159 10 197 484 218 484 3.37e-37 142
Msa1143260 MtrunA17_Chr6g0464861 28.041 485 262 17 7 463 11 436 4.58e-37 142
Msa1143260 MtrunA17_Chr4g0066131 26.775 493 275 18 17 471 23 467 4.70e-37 142
Msa1143260 MtrunA17_Chr5g0426401 32.581 310 160 12 175 467 22 299 4.71e-37 138
Msa1143260 MtrunA17_Chr7g0243861 26.818 440 258 13 3 413 10 414 5.10e-37 142
Msa1143260 MtrunA17_Chr8g0336331 26.078 510 306 16 1 477 4 475 7.09e-37 142
Msa1143260 MtrunA17_Chr6g0454401 26.154 520 297 20 1 477 4 479 7.14e-37 142
Msa1143260 MtrunA17_Chr4g0072771 26.708 483 303 13 4 476 22 463 8.28e-37 141
Msa1143260 MtrunA17_Chr1g0207861 25.743 505 316 17 6 484 7 478 1.12e-36 141
Msa1143260 MtrunA17_Chr7g0243931 26.265 514 297 16 3 474 13 486 1.20e-36 141
Msa1143260 MtrunA17_Chr6g0454181 26.550 516 313 17 1 485 4 484 1.27e-36 141
Msa1143260 MtrunA17_Chr4g0072761 30.376 372 210 12 114 476 119 450 1.28e-36 140
Msa1143260 MtrunA17_Chr1g0207931 30.576 278 161 7 212 478 244 500 1.33e-36 141
Msa1143260 MtrunA17_Chr8g0377921 28.745 494 283 17 7 471 3 456 1.43e-36 140
Msa1143260 MtrunA17_Chr8g0369341 28.041 485 285 17 1 457 1 449 1.65e-36 140
Msa1143260 MtrunA17_Chr4g0060511 26.415 530 279 16 3 474 7 483 2.17e-36 140
Msa1143260 MtrunA17_Chr4g0066221 28.792 389 233 16 110 477 114 479 3.35e-36 140
Msa1143260 MtrunA17_Chr3g0118711 30.903 288 154 9 212 486 230 485 4.23e-36 139
Msa1143260 MtrunA17_Chr1g0179901 26.376 527 282 16 7 477 16 492 5.39e-36 139
Msa1143260 MtrunA17_Chr7g0265051 27.626 514 304 20 1 477 1 483 6.42e-36 139
Msa1143260 MtrunA17_Chr4g0066151 26.190 504 282 20 17 480 28 481 6.46e-36 139
Msa1143260 MtrunA17_Chr7g0243611 37.607 234 111 7 211 431 78 289 6.92e-36 135
Msa1143260 MtrunA17_Chr7g0218831 25.376 465 284 15 7 457 6 421 8.78e-36 138
Msa1143260 MtrunA17_Chr7g0218811 25.490 459 282 16 7 452 15 426 8.95e-36 138
Msa1143260 MtrunA17_Chr7g0243631 33.688 282 151 9 211 474 219 482 1.05e-35 139
Msa1143260 MtrunA17_Chr6g0453961 26.706 513 301 19 5 480 17 491 1.06e-35 139
Msa1143260 MtrunA17_Chr7g0275681 28.400 500 297 19 7 477 12 479 1.40e-35 138
Msa1143260 MtrunA17_Chr1g0207831 24.748 497 306 14 9 479 10 464 1.42e-35 138
Msa1143260 MtrunA17_Chr6g0454331 26.679 521 308 19 1 484 1 484 1.50e-35 138
Msa1143260 MtrunA17_Chr6g0454291 28.295 516 290 23 1 477 1 475 1.79e-35 137
Msa1143260 MtrunA17_Chr1g0207971 25.755 497 291 15 7 477 8 452 2.42e-35 137
Msa1143260 MtrunA17_Chr6g0454131 30.284 317 180 7 173 477 190 477 2.43e-35 137
Msa1143260 MtrunA17_Chr3g0118771 27.397 511 295 21 3 477 17 487 2.54e-35 137
Msa1143260 MtrunA17_Chr4g0053321 32.955 264 147 6 241 492 246 491 3.73e-35 137
Msa1143260 MtrunA17_Chr7g0243711 33.080 263 144 7 234 479 70 317 3.80e-35 134
Msa1143260 MtrunA17_Chr6g0454121 30.284 317 180 9 173 477 190 477 3.86e-35 137
Msa1143260 MtrunA17_Chr4g0053501 26.220 492 294 16 9 474 12 460 4.05e-35 137
Msa1143260 MtrunA17_Chr6g0463861 27.930 401 237 13 107 483 106 478 4.53e-35 137
Msa1143260 MtrunA17_Chr7g0218821 25.745 470 278 18 7 452 5 427 4.88e-35 136
Msa1143260 MtrunA17_Chr5g0401851 37.339 233 122 5 255 478 266 483 5.10e-35 137
Msa1143260 MtrunA17_Chr1g0207951 26.283 487 284 16 9 467 658 1097 5.27e-35 139
Msa1143260 MtrunA17_Chr1g0207951 24.848 495 299 15 7 477 124 569 1.15e-32 132
Msa1143260 MtrunA17_Chr6g0454141 25.941 505 310 17 4 477 7 478 5.73e-35 136
Msa1143260 MtrunA17_Chr2g0294921 27.877 391 235 13 110 477 263 629 6.77e-35 138
Msa1143260 MtrunA17_Chr7g0218841 24.946 461 292 14 7 457 6 422 8.86e-35 135
Msa1143260 MtrunA17_Chr5g0409591 32.806 253 147 3 205 442 206 450 9.41e-35 135
Msa1143260 MtrunA17_Chr5g0419771 33.217 286 153 8 211 477 245 511 1.24e-34 136
Msa1143260 MtrunA17_Chr4g0066201 29.188 394 211 16 110 474 116 470 1.27e-34 135
Msa1143260 MtrunA17_Chr6g0463851 25.871 402 238 12 110 481 114 485 1.29e-34 135
Msa1143260 MtrunA17_Chr4g0066281 29.825 285 164 9 211 477 199 465 1.55e-34 135
Msa1143260 MtrunA17_Chr7g0243761 27.426 474 266 17 1 433 1 437 1.76e-34 135
Msa1143260 MtrunA17_Chr5g0431421 26.240 484 298 16 7 477 10 447 1.89e-34 134
Msa1143260 MtrunA17_Chr7g0241781 33.588 262 138 9 202 459 182 411 2.01e-34 134
Msa1143260 MtrunA17_Chr6g0454221 31.984 247 135 6 242 477 5 229 2.19e-34 131
Msa1143260 MtrunA17_Chr7g0265041 27.953 508 298 19 7 477 11 487 3.20e-34 134
Msa1143260 MtrunA17_Chr1g0207981 25.904 498 313 15 2 477 8 471 3.31e-34 134
Msa1143260 MtrunA17_Chr6g0482061 27.721 487 297 18 6 466 10 467 3.36e-34 134
Msa1143260 MtrunA17_Chr6g0454171 31.834 289 142 10 201 477 63 308 3.45e-34 130
Msa1143260 MtrunA17_Chr7g0243951 25.532 517 304 18 4 479 8 484 3.65e-34 134
Msa1143260 MtrunA17_Chr8g0374931 34.177 237 127 8 242 461 237 461 3.86e-34 134
Msa1143260 MtrunA17_Chr6g0453951 31.507 292 161 9 199 480 266 528 4.87e-34 134
Msa1143260 MtrunA17_Chr8g0355221 28.094 509 296 22 8 481 16 489 6.49e-34 134
Msa1143260 MtrunA17_Chr2g0294941 30.671 313 167 11 181 462 67 360 6.85e-34 131
Msa1143260 MtrunA17_Chr7g0218791 27.049 488 293 18 7 477 5 446 6.88e-34 132
Msa1143260 MtrunA17_Chr3g0118661 26.706 513 295 18 3 477 9 478 7.24e-34 133
Msa1143260 MtrunA17_Chr5g0431361 24.486 486 307 12 7 477 12 452 7.81e-34 132
Msa1143260 MtrunA17_Chr6g0454361 29.874 318 180 10 173 477 192 479 8.38e-34 133
Msa1143260 MtrunA17_Chr8g0377941 32.342 269 150 5 212 477 221 460 9.25e-34 133
Msa1143260 MtrunA17_Chr6g0454271 33.333 213 120 3 265 477 95 285 1.21e-33 129
Msa1143260 MtrunA17_Chr2g0307961 27.517 447 248 17 7 423 13 413 2.64e-33 131
Msa1143260 MtrunA17_Chr5g0431371 26.955 486 292 19 7 477 10 447 3.71e-33 130
Msa1143260 MtrunA17_Chr8g0374901 32.069 290 165 11 206 477 202 477 3.74e-33 131
Msa1143260 MtrunA17_Chr7g0249931 26.518 494 283 17 3 470 36 475 4.44e-33 131
Msa1143260 MtrunA17_Chr6g0452771 29.861 288 163 7 200 477 220 478 4.59e-33 131
Msa1143260 MtrunA17_Chr7g0241801 34.052 232 121 7 233 459 207 411 6.61e-33 130
Msa1143260 MtrunA17_Chr6g0463891 26.036 507 296 20 18 484 23 490 8.07e-33 130
Msa1143260 MtrunA17_Chr4g0044501 30.634 284 165 5 195 468 204 465 1.08e-32 130
Msa1143260 MtrunA17_Chr6g0454261 25.146 513 320 15 4 485 7 486 1.09e-32 130
Msa1143260 MtrunA17_Chr8g0374941 27.419 496 274 22 5 461 11 459 1.38e-32 132
Msa1143260 MtrunA17_Chr8g0374941 26.367 512 294 21 5 477 949 1416 2.32e-32 132
Msa1143260 MtrunA17_Chr8g0374941 30.952 294 167 11 187 461 648 924 7.29e-29 121
Msa1143260 MtrunA17_Chr4g0066261 31.469 286 169 9 207 477 207 480 1.67e-32 129
Msa1143260 MtrunA17_Chr5g0412101 29.925 401 211 17 100 471 104 463 1.69e-32 129
Msa1143260 MtrunA17_Chr5g0427571 36.245 229 116 7 236 452 63 273 1.99e-32 125
Msa1143260 MtrunA17_Chr6g0454211 32.743 226 130 4 259 484 569 772 2.13e-32 131
Msa1143260 MtrunA17_Chr6g0454211 28.230 209 86 8 201 399 91 245 1.17e-13 73.6
Msa1143260 MtrunA17_Chr8g0336321 26.899 487 273 18 1 452 1 439 2.21e-32 129
Msa1143260 MtrunA17_Chr6g0466831 27.743 483 267 15 7 462 18 445 2.50e-32 129
Msa1143260 MtrunA17_Chr7g0243911 37.681 207 102 5 253 449 12 201 3.01e-32 123
Msa1143260 MtrunA17_Chr4g0066171 25.859 495 277 21 17 474 31 472 4.05e-32 128
Msa1143260 MtrunA17_Chr2g0278721 28.302 477 269 18 7 452 517 951 4.79e-32 130
Msa1143260 MtrunA17_Chr2g0278721 35.484 217 116 5 241 452 243 440 2.57e-28 119
Msa1143260 MtrunA17_Chr7g0265151 31.488 289 156 8 211 477 214 482 7.40e-32 127
Msa1143260 MtrunA17_Chr7g0243851 27.237 503 260 20 5 474 9 438 8.35e-32 127
Msa1143260 MtrunA17_Chr8g0380531 26.987 478 291 16 7 467 10 446 9.31e-32 127
Msa1143260 MtrunA17_Chr4g0069611 26.724 464 269 13 7 447 15 430 1.30e-31 126
Msa1143260 MtrunA17_Chr2g0294931 30.070 286 169 9 206 474 206 477 1.31e-31 127
Msa1143260 MtrunA17_Chr6g0466841 27.479 484 267 16 7 462 18 445 1.34e-31 126
Msa1143260 MtrunA17_Chr5g0412111 32.422 256 127 9 200 442 204 426 1.63e-31 126
Msa1143260 MtrunA17_Chr7g0249981 25.202 496 289 17 1 470 19 458 1.91e-31 126
Msa1143260 MtrunA17_Chr5g0412131 26.061 495 292 18 7 471 12 462 2.32e-31 126
Msa1143260 MtrunA17_Chr5g0431441 25.709 494 283 15 7 470 18 457 2.88e-31 125
Msa1143260 MtrunA17_Chr8g0336251 26.694 487 274 18 1 452 1 439 3.17e-31 125
Msa1143260 MtrunA17_Chr7g0243811 34.167 240 131 6 185 419 164 381 3.71e-31 124
Msa1143260 MtrunA17_Chr7g0265111 36.444 225 117 5 264 477 305 514 4.09e-31 126
Msa1143260 MtrunA17_Chr1g0165701 34.252 254 135 8 244 481 249 486 4.57e-31 125
Msa1143260 MtrunA17_Chr3g0112761 27.049 488 254 18 3 454 4 425 4.75e-31 125
Msa1143260 MtrunA17_Chr5g0410941 33.054 239 136 7 256 479 267 496 6.76e-31 125
Msa1143260 MtrunA17_Chr5g0401721 24.805 512 300 18 4 477 5 469 1.33e-30 124
Msa1143260 MtrunA17_Chr8g0374971 28.763 299 185 9 197 477 191 479 1.84e-30 124
Msa1143260 MtrunA17_Chr8g0350881 32.895 228 134 5 260 477 261 479 1.88e-30 124
Msa1143260 MtrunA17_Chr3g0122001 25.889 506 311 17 2 477 1 472 2.12e-30 125
Msa1143260 MtrunA17_Chr3g0122001 26.285 506 308 16 2 477 481 951 6.97e-30 124
Msa1143260 MtrunA17_Chr6g0454351 25.845 503 304 19 3 480 8 466 2.72e-30 123
Msa1143260 MtrunA17_Chr8g0367221 27.255 499 245 20 7 454 12 443 3.50e-30 125
Msa1143260 MtrunA17_Chr8g0367221 36.866 217 115 5 242 454 1032 1230 5.63e-30 124
Msa1143260 MtrunA17_Chr8g0367221 33.333 261 138 6 202 454 1488 1720 2.51e-29 122
Msa1143260 MtrunA17_Chr5g0442501 29.595 321 198 11 4 313 2 305 3.51e-30 119
Msa1143260 MtrunA17_Chr4g0039881 26.434 488 269 16 16 473 1 428 5.25e-30 122
Msa1143260 MtrunA17_Chr2g0278741 33.074 257 142 6 201 452 291 522 5.66e-30 123
Msa1143260 MtrunA17_Chr7g0249961 32.039 206 117 3 265 470 69 251 1.22e-29 117
Msa1143260 MtrunA17_Chr5g0393591 24.686 478 279 16 7 448 17 449 1.28e-29 120
Msa1143260 MtrunA17_Chr4g0029151 26.891 476 266 14 1 447 14 436 1.34e-29 120
Msa1143260 MtrunA17_Chr5g0432731 25.610 328 199 7 152 477 11 295 1.96e-29 117
Msa1143260 MtrunA17_Chr5g0428081 32.035 231 139 5 250 471 251 472 2.80e-29 120
Msa1143260 MtrunA17_Chr5g0416741 26.453 499 292 22 18 479 24 484 2.88e-29 120
Msa1143260 MtrunA17_Chr8g0355011 31.429 210 122 3 275 484 180 367 5.63e-29 117
Msa1143260 MtrunA17_Chr2g0302851 26.446 484 292 17 7 473 16 452 6.93e-29 119
Msa1143260 MtrunA17_Chr3g0106231 24.043 470 303 13 6 467 17 440 1.99e-28 117
Msa1143260 MtrunA17_Chr6g0464091 26.237 465 287 15 7 452 18 445 4.42e-28 116
Msa1143260 MtrunA17_Chr3g0092031 35.870 184 99 4 264 447 3 167 1.13e-27 109
Msa1143260 MtrunA17_Chr3g0121991 24.852 507 314 17 2 477 74 544 1.53e-27 115
Msa1143260 MtrunA17_Chr8g0334841 42.254 142 75 3 175 315 3 138 1.75e-27 108
Msa1143260 MtrunA17_Chr7g0250001 29.520 271 160 9 206 470 194 439 1.83e-27 114
Msa1143260 MtrunA17_Chr6g0454371 33.508 191 105 5 287 477 1 169 2.86e-27 107
Msa1143260 MtrunA17_Chr8g0337381 43.200 125 67 2 350 474 1 121 3.63e-27 106
Msa1143260 MtrunA17_Chr4g0029131 35.326 184 104 3 267 447 257 428 2.11e-26 113
Msa1143260 MtrunA17_Chr3g0106251 29.104 268 153 6 206 467 46 282 2.13e-26 109
Msa1143260 MtrunA17_Chr6g0454251 27.896 423 245 17 1 391 1 395 4.69e-26 109
Msa1143260 MtrunA17_Chr4g0040691 31.111 225 133 5 259 477 248 456 4.30e-25 107
Msa1143260 MtrunA17_Chr4g0040711 30.901 233 143 5 241 472 236 451 1.23e-24 106
Msa1143260 MtrunA17_Chr8g0336261 34.839 155 79 4 287 441 1 133 2.26e-24 98.6
Msa1143260 MtrunA17_Chr5g0416821 26.613 496 294 20 18 484 25 479 5.57e-24 104
Msa1143260 MtrunA17_Chr5g0442551 27.953 254 151 7 112 360 68 294 1.09e-23 101
Msa1143260 MtrunA17_Chr1g0196851 34.010 197 115 4 246 442 279 460 2.32e-23 103
Msa1143260 MtrunA17_Chr7g0231631 31.557 244 132 6 240 474 38 255 3.71e-23 99.0
Msa1143260 MtrunA17_Chr8g0357361 33.333 165 90 3 252 413 102 249 1.05e-22 97.8
Msa1143260 MtrunA17_Chr3g0118751 24.708 514 278 22 2 477 1 443 1.07e-22 100
Msa1143260 MtrunA17_Chr6g0449991 25.581 344 224 8 5 345 4 318 1.99e-22 98.2
Msa1143260 MtrunA17_Chr6g0454231 28.148 270 134 10 210 477 6 217 3.74e-22 99.4
Msa1143260 MtrunA17_Chr2g0283041 27.935 247 154 4 208 454 208 430 7.41e-22 98.2
Msa1143260 MtrunA17_Chr5g0448551 31.395 258 138 9 197 444 197 425 7.50e-22 98.2
Msa1143260 MtrunA17_Chr3g0079721 28.179 291 194 6 5 285 3 288 3.13e-21 94.0
Msa1143260 MtrunA17_Chr4g0066141 35.294 153 87 5 336 477 199 350 6.44e-21 94.4
Msa1143260 MtrunA17_Chr1g0207881 32.867 143 89 2 325 467 238 373 8.72e-21 94.4
Msa1143260 MtrunA17_Chr2g0319751 33.198 247 141 8 233 477 709 933 1.12e-20 95.9
Msa1143260 MtrunA17_Chr2g0319751 36.486 148 91 3 332 477 286 432 6.46e-18 87.4
Msa1143260 MtrunA17_Chr2g0319761 31.405 242 146 6 234 473 229 452 7.41e-20 92.0
Msa1143260 MtrunA17_Chr2g0321331 32.609 184 92 3 272 455 91 242 9.92e-20 89.0
Msa1143260 MtrunA17_Chr2g0319791 31.429 245 140 7 233 473 232 452 3.77e-19 90.1
Msa1143260 MtrunA17_Chr2g0319731 32.727 220 123 5 237 455 255 450 4.10e-19 90.1
Msa1143260 MtrunA17_Chr7g0243731 50.000 66 33 0 349 414 7 72 5.60e-18 78.6
Msa1143260 MtrunA17_Chr2g0319801 32.877 219 122 5 238 455 239 433 3.24e-17 84.0
Msa1143260 MtrunA17_Chr6g0469961 29.448 163 107 3 148 307 7 164 2.16e-14 70.9
Msa1143260 MtrunA17_Chr7g0250021 23.167 341 214 11 3 322 8 321 3.68e-13 70.5
Msa1143260 MtrunA17_Chr7g0243721 37.383 107 57 3 211 310 32 135 7.74e-12 63.2
Msa1143260 MtrunA17_Chr6g0454391 41.667 60 35 0 365 424 11 70 2.09e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1143260 AT3G50740.1 46.964 494 246 9 5 493 5 487 7.08e-156 452
Msa1143260 AT5G66690.1 44.628 484 249 8 5 484 5 473 9.03e-149 434
Msa1143260 AT5G26310.1 43.478 483 252 8 5 482 5 471 9.79e-146 426
Msa1143260 AT2G18570.1 42.977 477 256 7 7 480 5 468 8.77e-128 380
Msa1143260 AT4G36770.1 46.753 462 218 13 7 460 4 445 1.44e-127 379
Msa1143260 AT4G01070.1 40.586 478 252 8 3 477 4 452 9.86e-110 334
Msa1143260 AT1G01390.1 43.590 468 246 9 7 471 8 460 2.41e-109 333
Msa1143260 AT1G01390.2 43.590 468 246 9 7 471 25 477 3.17e-109 333
Msa1143260 AT1G01420.1 43.237 451 237 8 7 454 8 442 6.74e-108 329
Msa1143260 AT1G01420.2 43.237 451 237 8 7 454 11 445 7.53e-108 329
Msa1143260 AT2G18560.1 43.299 388 208 4 95 480 1 378 1.94e-105 320
Msa1143260 AT4G15280.1 32.673 505 279 12 5 490 2 464 8.80e-69 228
Msa1143260 AT4G15280.2 32.673 505 279 12 5 490 34 496 1.48e-68 228
Msa1143260 AT3G16520.3 31.092 476 295 9 9 476 7 457 1.39e-67 224
Msa1143260 AT3G16520.1 31.991 447 278 8 9 447 7 435 6.48e-67 222
Msa1143260 AT3G16520.2 31.991 447 278 8 9 447 7 435 6.83e-67 222
Msa1143260 AT3G21790.1 32.568 479 260 14 5 449 2 451 8.19e-65 218
Msa1143260 AT3G21800.1 31.549 523 269 20 4 482 2 479 1.53e-64 217
Msa1143260 AT3G21750.1 32.008 503 275 14 5 477 2 467 9.73e-64 214
Msa1143260 AT3G21760.1 31.755 507 283 16 5 477 2 479 2.98e-63 213
Msa1143260 AT1G07250.1 31.911 492 274 14 4 467 3 461 1.94e-62 211
Msa1143260 AT4G01070.2 38.218 348 199 6 3 347 4 338 6.16e-61 203
Msa1143260 AT1G07260.1 32.258 465 263 12 9 449 8 444 2.06e-59 203
Msa1143260 AT3G21780.1 31.944 504 274 18 5 477 2 467 3.76e-59 202
Msa1143260 AT2G29740.1 31.911 492 274 17 4 467 5 463 6.48e-59 202
Msa1143260 AT2G29710.1 31.568 491 278 16 9 477 7 461 1.69e-58 200
Msa1143260 AT1G07240.1 32.604 503 270 18 9 477 7 474 5.54e-58 199
Msa1143260 AT4G15260.1 35.185 378 200 9 120 477 1 353 3.52e-57 194
Msa1143260 AT2G29730.1 28.921 491 301 12 4 477 2 461 1.34e-56 195
Msa1143260 AT2G29750.1 30.390 487 274 17 4 460 5 456 6.48e-56 194
Msa1143260 AT2G16890.2 31.027 477 255 14 7 453 9 441 1.87e-51 182
Msa1143260 AT2G15490.1 29.283 502 307 13 1 477 1 479 8.26e-51 180
Msa1143260 AT2G15490.3 28.685 502 307 12 1 477 1 476 1.44e-50 179
Msa1143260 AT2G15480.1 29.541 501 302 13 2 477 5 479 1.71e-50 179
Msa1143260 AT2G15480.2 30.556 468 274 13 2 444 5 446 5.92e-50 178
Msa1143260 AT5G59580.1 29.237 472 291 11 5 471 7 440 1.19e-49 176
Msa1143260 AT5G59590.1 30.105 475 286 15 4 471 7 442 1.57e-49 176
Msa1143260 AT4G34131.1 29.735 491 260 15 4 452 7 454 2.67e-48 173
Msa1143260 AT1G78270.1 29.941 511 270 21 3 471 9 473 7.39e-48 172
Msa1143260 AT5G12890.1 30.357 504 262 21 9 465 12 473 1.23e-47 172
Msa1143260 AT2G16890.3 30.769 455 241 14 7 431 9 419 2.94e-47 169
Msa1143260 AT2G31790.1 29.691 485 278 15 3 467 4 445 4.35e-47 169
Msa1143260 AT3G46690.1 29.668 482 290 15 4 476 6 447 4.60e-47 169
Msa1143260 AT3G46680.1 28.870 478 293 16 2 471 4 442 1.25e-45 166
Msa1143260 AT5G14860.1 30.060 499 264 20 2 460 3 456 4.40e-45 165
Msa1143260 AT1G22360.1 28.827 503 288 18 2 471 5 470 6.03e-45 164
Msa1143260 AT1G22400.1 30.512 508 272 25 3 471 9 474 1.41e-44 164
Msa1143260 AT4G34135.1 29.487 468 263 15 4 438 8 441 2.17e-44 163
Msa1143260 AT2G36770.1 26.923 520 304 18 1 477 1 487 4.45e-44 162
Msa1143260 AT1G24100.1 29.622 476 291 11 5 470 9 450 8.60e-44 160
Msa1143260 AT3G46700.1 28.855 454 267 15 4 447 6 413 1.31e-43 160
Msa1143260 AT5G03490.1 29.880 502 274 20 3 479 15 463 1.55e-43 160
Msa1143260 AT1G05680.1 28.660 485 289 11 2 470 1 444 1.74e-43 160
Msa1143260 AT2G36800.1 26.834 518 306 17 1 477 1 486 3.30e-43 160
Msa1143260 AT2G36970.1 26.210 496 301 14 3 471 6 463 4.03e-43 159
Msa1143260 AT1G10400.1 28.747 487 299 14 1 471 1 455 9.52e-43 158
Msa1143260 AT2G36760.1 27.092 502 307 18 7 477 14 487 9.55e-43 159
Msa1143260 AT3G46660.1 28.870 478 288 15 5 471 12 448 1.48e-42 157
Msa1143260 AT2G36780.1 28.210 514 305 16 1 477 1 487 1.95e-42 158
Msa1143260 AT1G05675.1 27.893 484 286 13 6 470 5 444 2.38e-42 157
Msa1143260 AT1G51210.1 28.846 468 263 15 3 452 16 431 2.81e-42 156
Msa1143260 AT1G22340.1 27.049 488 294 16 3 461 9 463 1.04e-41 155
Msa1143260 AT5G17050.1 26.639 488 293 17 3 471 8 449 1.37e-41 155
Msa1143260 AT3G53160.1 27.183 504 304 15 7 477 8 481 1.72e-41 155
Msa1143260 AT1G22380.1 27.634 503 290 15 4 471 10 473 3.67e-41 154
Msa1143260 AT4G34138.1 35.793 271 134 7 211 467 223 467 1.45e-40 152
Msa1143260 AT3G46670.1 29.375 480 273 18 9 471 11 441 2.09e-40 151
Msa1143260 AT3G46720.1 28.033 478 286 14 3 471 5 433 2.38e-40 151
Msa1143260 AT3G46650.1 29.019 479 267 18 5 471 8 425 2.41e-40 150
Msa1143260 AT2G43840.1 28.657 499 260 17 1 467 1 435 1.31e-39 149
Msa1143260 AT2G36750.1 27.202 511 294 19 7 477 10 482 1.67e-39 149
Msa1143260 AT2G43840.2 28.457 499 261 17 1 467 1 435 7.07e-39 147
Msa1143260 AT1G22360.2 27.634 503 282 18 2 471 5 458 7.68e-39 147
Msa1143260 AT2G36790.1 27.778 504 301 15 7 477 13 486 1.12e-38 147
Msa1143260 AT5G05880.1 27.521 476 300 12 3 471 4 441 2.31e-38 145
Msa1143260 AT2G30140.2 28.330 473 291 12 3 468 9 440 2.50e-38 145
Msa1143260 AT2G30140.1 28.270 474 291 12 3 468 9 441 3.53e-38 145
Msa1143260 AT1G30530.1 28.059 474 287 15 8 471 14 443 4.17e-38 145
Msa1143260 AT3G53150.1 27.992 518 283 21 3 467 18 498 1.34e-37 145
Msa1143260 AT5G17030.1 26.626 492 287 17 3 471 8 448 6.88e-37 142
Msa1143260 AT1G22370.2 29.515 515 260 22 4 471 10 468 7.51e-37 142
Msa1143260 AT2G30150.2 28.484 488 283 17 7 477 13 451 1.28e-36 141
Msa1143260 AT4G15490.1 25.948 501 294 15 3 471 4 459 2.66e-36 140
Msa1143260 AT3G21560.1 25.820 488 315 14 7 476 12 470 3.52e-36 140
Msa1143260 AT4G15480.1 25.996 477 317 11 7 471 19 471 6.47e-36 139
Msa1143260 AT2G43820.1 27.364 497 269 16 1 467 1 435 6.99e-36 139
Msa1143260 AT2G30150.1 28.067 481 280 17 14 477 4 435 9.98e-36 138
Msa1143260 AT5G17040.1 27.479 484 278 17 6 471 4 432 1.44e-35 137
Msa1143260 AT2G26480.1 32.550 298 170 6 178 471 168 438 1.99e-35 137
Msa1143260 AT1G73880.1 26.914 431 260 15 5 415 12 407 7.11e-35 136
Msa1143260 AT2G28080.1 27.696 473 289 17 14 469 25 461 8.10e-35 136
Msa1143260 AT3G11340.1 32.482 274 155 6 197 467 187 433 9.80e-35 135
Msa1143260 AT5G17040.2 29.091 330 192 10 150 471 35 330 1.21e-34 133
Msa1143260 AT5G65550.1 27.143 490 271 15 5 459 7 445 7.52e-34 133
Msa1143260 AT1G22370.1 34.672 274 137 8 211 471 54 298 1.07e-33 129
Msa1143260 AT4G15550.1 27.021 470 283 15 7 449 13 449 3.69e-33 131
Msa1143260 AT3G55700.1 32.576 264 152 5 211 474 209 446 3.70e-33 131
Msa1143260 AT2G31750.2 26.139 505 296 19 5 481 6 461 5.29e-33 131
Msa1143260 AT2G31750.1 26.122 490 289 18 5 470 6 446 5.29e-33 130
Msa1143260 AT5G05870.1 33.333 234 133 4 241 471 234 447 5.66e-33 130
Msa1143260 AT5G38010.1 25.657 495 296 16 4 476 7 451 1.19e-32 130
Msa1143260 AT5G05890.1 26.849 365 237 6 110 471 108 445 2.54e-32 129
Msa1143260 AT5G38040.1 30.897 301 168 9 178 471 175 442 1.71e-31 126
Msa1143260 AT2G23260.1 25.519 482 295 15 4 467 7 442 2.41e-31 126
Msa1143260 AT5G49690.1 30.169 295 148 8 187 454 168 431 7.36e-31 125
Msa1143260 AT1G05560.1 25.052 483 313 15 7 477 5 450 1.19e-30 124
Msa1143260 AT5G05900.1 26.667 480 298 12 3 471 4 440 1.71e-30 124
Msa1143260 AT4G15500.1 23.030 495 315 12 1 471 3 455 1.97e-30 124
Msa1143260 AT1G05560.2 25.052 483 313 15 7 477 55 500 2.24e-30 124
Msa1143260 AT1G06000.1 25.349 501 280 20 3 480 6 435 4.19e-30 122
Msa1143260 AT5G05860.1 34.583 240 133 5 239 475 226 444 8.60e-30 121
Msa1143260 AT3G55710.1 32.222 270 151 7 211 474 207 450 2.88e-29 120
Msa1143260 AT1G05530.1 26.939 490 293 18 7 473 5 452 3.13e-29 120
Msa1143260 AT4G14090.1 25.826 484 290 16 4 467 10 444 3.83e-29 120
Msa1143260 AT2G23250.1 30.824 279 152 8 209 477 187 434 5.54e-28 116
Msa1143260 AT4G27570.1 29.528 254 155 3 201 454 192 421 1.23e-26 112
Msa1143260 AT4G27560.1 29.644 253 154 3 202 454 193 421 2.69e-26 111
Msa1143260 AT1G64910.1 30.000 250 151 4 206 455 191 416 5.40e-26 110
Msa1143260 AT2G22590.1 25.949 474 287 16 5 454 13 446 1.25e-25 110
Msa1143260 AT3G02100.1 31.716 268 127 9 195 449 211 435 2.60e-25 108
Msa1143260 AT5G53990.1 29.231 260 160 4 197 456 182 417 2.46e-24 105
Msa1143260 AT5G54010.1 28.938 273 168 5 183 454 174 421 2.91e-24 105
Msa1143260 AT1G64920.1 23.640 478 295 13 2 461 1 426 1.55e-22 100
Msa1143260 AT3G29630.1 25.304 494 308 15 2 483 1 445 2.05e-22 100
Msa1143260 AT5G37950.2 27.740 292 174 8 106 390 76 337 6.90e-22 97.1
Msa1143260 AT1G50580.1 27.203 261 168 3 196 456 180 418 1.82e-21 97.4
Msa1143260 AT2G22930.1 25.869 259 168 3 197 455 182 416 1.91e-21 97.1
Msa1143260 AT5G37950.1 27.907 301 168 10 106 390 76 343 3.79e-21 95.1
Msa1143260 AT4G09500.2 26.154 260 168 3 197 456 182 417 7.38e-21 95.5
Msa1143260 AT3G29630.2 29.437 231 146 3 253 483 206 419 1.33e-20 94.4
Msa1143260 AT4G09500.1 30.220 182 111 2 274 455 226 391 3.90e-19 90.1
Msa1143260 AT3G22250.1 29.048 210 112 6 259 458 268 450 1.22e-18 89.0
Msa1143260 AT5G54060.1 28.372 215 136 4 241 454 243 440 8.26e-18 86.3
Msa1143260 AT2G16890.4 27.439 328 184 12 7 305 9 311 3.69e-16 79.7
Msa1143260 AT2G16890.1 27.439 328 184 12 7 305 9 311 3.69e-16 79.7
Msa1143260 AT4G34135.2 25.740 338 204 12 4 312 8 327 2.14e-13 71.6

Find 146 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACCGCTTTCGATTCT+TGG 0.115382 7_4:+18715529 Msa1143260:CDS
ATTAACCGTTGATGGGATTT+TGG 0.180078 7_4:+18715645 Msa1143260:CDS
AGATGGTTACGTCGAAATTT+TGG 0.193825 7_4:-18715123 None:intergenic
ACTAAGGCGGTTATTGAAAA+TGG 0.203582 7_4:+18715700 Msa1143260:CDS
CTAATTCAATGGTGGGAATT+AGG 0.215918 7_4:-18715081 None:intergenic
ACAATGATGTTGAGGCTATT+AGG 0.228543 7_4:-18715214 None:intergenic
TGAGTCAGCAGCGATTTATT+TGG 0.260828 7_4:+18715929 Msa1143260:CDS
AAGATTTGTGATCGAATAAA+AGG 0.277855 7_4:-18715325 None:intergenic
CAATGATGTTGAGGCTATTA+GGG 0.291810 7_4:-18715213 None:intergenic
AATCCCAAGGATGGATTGTT+TGG 0.311645 7_4:-18715271 None:intergenic
CTAATTCCCACCATTGAATT+AGG 0.314775 7_4:+18715082 Msa1143260:CDS
TGAAACATTTGTTGCACCTT+GGG 0.317017 7_4:+18715582 Msa1143260:CDS
AGTTAAAGTTAATGAGTATA+AGG 0.338726 7_4:+18716368 Msa1143260:CDS
GTTCTTATCGTGGACCTCTT+TGG 0.343662 7_4:+18715370 Msa1143260:CDS
TGCTTAAGCACCCCGAGCTT+TGG 0.361718 7_4:-18716490 None:intergenic
TCGGTCATATATTTGTCATT+TGG 0.365839 7_4:+18715850 Msa1143260:CDS
GAGTCAGCAGCGATTTATTT+GGG 0.367043 7_4:+18715930 Msa1143260:CDS
CTAAGGCGGTTATTGAAAAT+GGG 0.367692 7_4:+18715701 Msa1143260:CDS
GGTGAACACGTGGCAAGATC+TGG 0.384639 7_4:+18715666 Msa1143260:CDS
AGGGAAATATTAACCGTTGA+TGG 0.384981 7_4:+18715637 Msa1143260:CDS
GAGGGAGTTGGCTTACGGTT+TGG 0.386069 7_4:+18715903 Msa1143260:CDS
GAGAAAGCTTCGTCTGTGTT+TGG 0.391515 7_4:+18716399 Msa1143260:CDS
TTCGATTCTTGGTTGTGAAC+CGG 0.393108 7_4:+18715540 Msa1143260:CDS
AACTGTGGTGGATTACTTGC+CGG 0.398081 7_4:+18716020 Msa1143260:CDS
TTGTGAACCGGTTCGGTTTG+AGG 0.405899 7_4:+18715552 Msa1143260:CDS
TGACCGACTCAGCCGGTTGC+CGG 0.409864 7_4:-18715834 None:intergenic
TCACTCTCACCACCCTTCTT+CGG 0.418950 7_4:-18715787 None:intergenic
GAGCTTTGGCTTCAGATCCT+TGG 0.420922 7_4:-18716476 None:intergenic
ACCACCCTTCTTCGGTTCAT+CGG 0.423363 7_4:-18715779 None:intergenic
GTCACAAAACCACCCGTTGA+TGG 0.428969 7_4:-18716120 None:intergenic
TTCTTGGTTGTGAACCGGTT+CGG 0.442022 7_4:+18715545 Msa1143260:CDS
GAGTTGGCTTGACCGGCAAC+CGG 0.442794 7_4:+18715822 Msa1143260:CDS
CTTTGGCTTCAGATCCTTGG+TGG 0.442832 7_4:-18716473 None:intergenic
AACAGATGGAGGATTCTTCA+TGG 0.448895 7_4:-18715350 None:intergenic
CTCAGCTTGTGGGGCCCACA+TGG 0.449094 7_4:-18716085 None:intergenic
GTTAATGAGTATAAGGTAAG+TGG 0.459473 7_4:+18716375 Msa1143260:CDS
CAAATGAGGGAGTTGGCTTA+CGG 0.461895 7_4:+18715898 Msa1143260:CDS
TTGAAACATTTGTTGCACCT+TGG 0.462520 7_4:+18715581 Msa1143260:CDS
AGGATCTGAAGCCAAAGCTC+GGG 0.464549 7_4:+18716479 Msa1143260:CDS
ATCCCAAGGATGGATTGTTT+GGG 0.467520 7_4:-18715270 None:intergenic
TCTGGAGCCAACAGCTACTA+AGG 0.469308 7_4:+18715684 Msa1143260:CDS
GACCCAAACAATCCATCCTT+GGG 0.471552 7_4:+18715268 Msa1143260:CDS
AAGACGTTTGCCTAATTCAA+TGG 0.473005 7_4:-18715092 None:intergenic
GGAGCTTGGTGTGGCGGTGA+AGG 0.473757 7_4:+18716248 Msa1143260:CDS
GGCAACGACAACGGTGGCGG+AGG 0.476716 7_4:+18716269 Msa1143260:CDS
TCTTCTAGCCAGTCCTGGCA+TGG 0.479572 7_4:+18715054 Msa1143260:CDS
TGACCCAAACAATCCATCCT+TGG 0.481784 7_4:+18715267 Msa1143260:CDS
AAGAACCGATGAACCGAAGA+AGG 0.487455 7_4:+18715774 Msa1143260:CDS
TTCAACGTTGCGGGTGCAGA+TGG 0.491511 7_4:+18715994 Msa1143260:CDS
GTGTTGGAGAGTATTCTTAA+CGG 0.492493 7_4:+18716162 Msa1143260:CDS
ATATTAAAACATCCATCAAC+GGG 0.492704 7_4:+18716108 Msa1143260:CDS
AAAGGACCGGTTTATCCGAT+TGG 0.495178 7_4:+18715742 Msa1143260:CDS
AGCGGTCCAATCGGATAAAC+CGG 0.497350 7_4:-18715748 None:intergenic
GCAGTTCTTCTAGCCAGTCC+TGG 0.507678 7_4:+18715049 Msa1143260:CDS
GTTCTTACTAGCGGTCCAAT+CGG 0.509543 7_4:-18715757 None:intergenic
ATATATTTGTCATTTGGAAG+TGG 0.509609 7_4:+18715856 Msa1143260:CDS
TATTTGTCATTTGGAAGTGG+TGG 0.510421 7_4:+18715859 Msa1143260:CDS
GGAATTAGGTGTCCCATGCC+AGG 0.512529 7_4:-18715067 None:intergenic
AGGGCTTTGTGTTCCCATGT+GGG 0.512578 7_4:+18716071 Msa1143260:CDS
TAGGTGTCCCATGCCAGGAC+TGG 0.514601 7_4:-18715062 None:intergenic
AAGGTGCAACAAATGTTTCA+AGG 0.516516 7_4:-18715579 None:intergenic
AGGAAAGTTTGTGAAAGGAC+CGG 0.516563 7_4:+18715729 Msa1143260:CDS
ACAATTTGTAATCCCAAGGA+TGG 0.518037 7_4:-18715280 None:intergenic
CATGTGCAACTCACGTGCCA+TGG 0.524195 7_4:-18715407 None:intergenic
GGGAAATATTAACCGTTGAT+GGG 0.526221 7_4:+18715638 Msa1143260:CDS
AGGGTATCCTCAAACCGAAC+CGG 0.526804 7_4:-18715559 None:intergenic
TGAATAGGACAAAAGAGGTA+GGG 0.527801 7_4:+18716052 Msa1143260:CDS
AAGGATCTGAAGCCAAAGCT+CGG 0.532679 7_4:+18716478 Msa1143260:CDS
TTGAATAGGACAAAAGAGGT+AGG 0.532740 7_4:+18716051 Msa1143260:CDS
TAGGGCTTTGTGTTCCCATG+TGG 0.539065 7_4:+18716070 Msa1143260:CDS
GGAAGTGATTAGAAGAGTGA+TGG 0.539334 7_4:+18716320 Msa1143260:CDS
TGACCGGCAACCGGCTGAGT+CGG 0.540269 7_4:+18715831 Msa1143260:CDS
ATTTGTCATTTGGAAGTGGT+GGG 0.540559 7_4:+18715860 Msa1143260:CDS
ACGGTGTTCCGATGGTTGCA+TGG 0.543830 7_4:+18716181 Msa1143260:CDS
CCTCATTTGACCTTCCGACA+TGG 0.544554 7_4:-18715884 None:intergenic
TAGAACAATTTGTAATCCCA+AGG 0.551662 7_4:-18715284 None:intergenic
TGCGGATGCATTATCCTCTG+TGG 0.553495 7_4:-18715965 None:intergenic
TATTCTTAACGGTGTTCCGA+TGG 0.555061 7_4:+18716173 Msa1143260:CDS
CTTCATCTGTGATGAAAGGA+AGG 0.555836 7_4:-18715483 None:intergenic
GCAACGACAACGGTGGCGGA+GGG 0.556375 7_4:+18716270 Msa1143260:CDS
AACAGCAGTGAACCAAGCAT+TGG 0.558371 7_4:-18715452 None:intergenic
GCGGTTCATGATTCTTAGCA+TGG 0.558955 7_4:-18715516 None:intergenic
GAAGGCAACGACAACGGTGG+CGG 0.559539 7_4:+18716266 Msa1143260:CDS
CCATGTCGGAAGGTCAAATG+AGG 0.560519 7_4:+18715884 Msa1143260:CDS
ACGACAACGGTGGCGGAGGG+TGG 0.561139 7_4:+18716273 Msa1143260:CDS
CGTTTGCCTAATTCAATGGT+GGG 0.562353 7_4:-18715088 None:intergenic
ATTACAAATTGTTCTAACCA+TGG 0.565528 7_4:+18715291 Msa1143260:CDS
ATCTTCTGCTCTGCATAAAG+CGG 0.565650 7_4:-18716204 None:intergenic
GATTTATTTGGGTGGTGCGG+CGG 0.565726 7_4:+18715941 Msa1143260:CDS
CTTCTAGCCAGTCCTGGCAT+GGG 0.570142 7_4:+18715055 Msa1143260:CDS
GGAAGGTCAAATGAGGGAGT+TGG 0.572490 7_4:+18715891 Msa1143260:CDS
AAATATATGACCGACTCAGC+CGG 0.572985 7_4:-18715841 None:intergenic
AAAGCTTCATCTGTGATGAA+AGG 0.573302 7_4:-18715487 None:intergenic
TCAGCTTGTGGGGCCCACAT+GGG 0.580375 7_4:-18716084 None:intergenic
AGTTTGTCAGAGACATCGAC+AGG 0.580495 7_4:-18715244 None:intergenic
GCGGATGCATTATCCTCTGT+GGG 0.580659 7_4:-18715964 None:intergenic
ATGTGCAACTCACGTGCCAT+GGG 0.583729 7_4:-18715406 None:intergenic
GGCGGTTGTGACGACGAAGA+TGG 0.586383 7_4:-18715140 None:intergenic
GTGGTGGATTACTTGCCGGA+GGG 0.587242 7_4:+18716024 Msa1143260:CDS
ACGTTTGCCTAATTCAATGG+TGG 0.587817 7_4:-18715089 None:intergenic
GATATTAAAACATCCATCAA+CGG 0.588547 7_4:+18716107 Msa1143260:CDS
TCCTCCATCTGTTCTTATCG+TGG 0.589140 7_4:+18715360 Msa1143260:CDS
ACCAAGCTCCTCTGATAACA+TGG 0.589196 7_4:-18716235 None:intergenic
TAAGGCGGTTATTGAAAATG+GGG 0.589730 7_4:+18715702 Msa1143260:CDS
ATAACCGCCTTAGTAGCTGT+TGG 0.593391 7_4:-18715691 None:intergenic
AGGTGCAACAAATGTTTCAA+GGG 0.594651 7_4:-18715578 None:intergenic
GGTTCATCGGTTCTTACTAG+CGG 0.598027 7_4:-18715766 None:intergenic
TGGTGGATTACTTGCCGGAG+GGG 0.599013 7_4:+18716025 Msa1143260:CDS
AGAGTGATGGTTGATGAAGA+AGG 0.601665 7_4:+18716333 Msa1143260:CDS
AGGTCCACGATAAGAACAGA+TGG 0.601849 7_4:-18715364 None:intergenic
GGTGGTGCGGCGGCCCACAG+AGG 0.603216 7_4:+18715951 Msa1143260:CDS
AAAGTTACGTTGAAGTCACA+AGG 0.605910 7_4:+18715617 Msa1143260:CDS
TAAAGCGGCCATGCAACCAT+CGG 0.607242 7_4:-18716189 None:intergenic
ATCAGAGGAGCTTGGTGTGG+CGG 0.609932 7_4:+18716242 Msa1143260:CDS
AGCGATTTATTTGGGTGGTG+CGG 0.610105 7_4:+18715938 Msa1143260:CDS
GAAACATTTGTTGCACCTTG+GGG 0.615035 7_4:+18715583 Msa1143260:CDS
TCAGCAGCGATTTATTTGGG+TGG 0.615645 7_4:+18715933 Msa1143260:CDS
CTGTGGTTGGAATTCTGTGT+TGG 0.615758 7_4:+18716146 Msa1143260:CDS
AGTGGTGGGACCATGTCGGA+AGG 0.619154 7_4:+18715874 Msa1143260:CDS
TGTGGTGGATTACTTGCCGG+AGG 0.621282 7_4:+18716023 Msa1143260:CDS
GGATCTGAAGCCAAAGCTCG+GGG 0.626278 7_4:+18716480 Msa1143260:CDS
GGCGGTGAAGGCAACGACAA+CGG 0.626813 7_4:+18716260 Msa1143260:CDS
TGTGTCTGAATCTGAGGTGG+CGG 0.636604 7_4:-18715158 None:intergenic
GAATGCTACCATGTTATCAG+AGG 0.636804 7_4:+18716227 Msa1143260:CDS
GTTATCAGAGGAGCTTGGTG+TGG 0.638419 7_4:+18716239 Msa1143260:CDS
ACCATGTTATCAGAGGAGCT+TGG 0.641662 7_4:+18716234 Msa1143260:CDS
TTAAAACATCCATCAACGGG+TGG 0.642894 7_4:+18716111 Msa1143260:CDS
ACCGATGAACCGAAGAAGGG+TGG 0.643390 7_4:+18715778 Msa1143260:CDS
TGATGTGTCTGAATCTGAGG+TGG 0.643996 7_4:-18715161 None:intergenic
TGGAAGTGGTGGGACCATGT+CGG 0.656190 7_4:+18715870 Msa1143260:CDS
TCCACGATAAGAACAGATGG+AGG 0.660881 7_4:-18715361 None:intergenic
AGAACCGATGAACCGAAGAA+GGG 0.660938 7_4:+18715775 Msa1143260:CDS
GAAAAGCTGCAGTACCAAAG+AGG 0.662878 7_4:-18715384 None:intergenic
GTTCACCAAAATCCCATCAA+CGG 0.668646 7_4:-18715650 None:intergenic
TGCAGATGGAACAACTGTGG+TGG 0.673467 7_4:+18716008 Msa1143260:CDS
CATGTCGGAAGGTCAAATGA+GGG 0.688297 7_4:+18715885 Msa1143260:CDS
TGTGAACTTTATCTCCACCA+AGG 0.688348 7_4:+18716459 Msa1143260:CDS
TTGTCAGAGACATCGACAGG+AGG 0.693714 7_4:-18715241 None:intergenic
GAGGTGTTACAATGATGTTG+AGG 0.706200 7_4:-18715222 None:intergenic
AAGTTACGTTGAAGTCACAA+GGG 0.708644 7_4:+18715618 Msa1143260:CDS
GGTGAAGGCAACGACAACGG+TGG 0.716471 7_4:+18716263 Msa1143260:CDS
AAAAGGAAGAGATTCAACCA+TGG 0.722073 7_4:-18715308 None:intergenic
TGTTTGTAGAGAAAATATAG+CGG 0.725903 7_4:+18716299 Msa1143260:CDS
TCACAACCAAGAATCGAAAG+CGG 0.733034 7_4:-18715535 None:intergenic
GGAGCCAACAGCTACTAAGG+CGG 0.734831 7_4:+18715687 Msa1143260:CDS
GGGTGCAGATGGAACAACTG+TGG 0.777902 7_4:+18716005 Msa1143260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTGAAAATTTAATTTTGAGT+TGG + chr7_4:18715806-18715825 Msa1143260:CDS 20.0%
!! AGTTAAAGTTAATGAGTATA+AGG + chr7_4:18716368-18716387 Msa1143260:CDS 20.0%
!!! GTGAAAATTTAATTTTGAGT+TGG + chr7_4:18715806-18715825 Msa1143260:CDS 20.0%
!! AGTTAAAGTTAATGAGTATA+AGG + chr7_4:18716368-18716387 Msa1143260:CDS 20.0%
! ATTACAAATTGTTCTAACCA+TGG + chr7_4:18715291-18715310 Msa1143260:CDS 25.0%
! AAGATTTGTGATCGAATAAA+AGG - chr7_4:18715328-18715347 None:intergenic 25.0%
!! TCAACGTAACTTTTATGAAT+AGG - chr7_4:18715610-18715629 None:intergenic 25.0%
!! ATATATTTGTCATTTGGAAG+TGG + chr7_4:18715856-18715875 Msa1143260:CDS 25.0%
! GATATTAAAACATCCATCAA+CGG + chr7_4:18716107-18716126 Msa1143260:CDS 25.0%
! ATATTAAAACATCCATCAAC+GGG + chr7_4:18716108-18716127 Msa1143260:CDS 25.0%
! TGTTTGTAGAGAAAATATAG+CGG + chr7_4:18716299-18716318 Msa1143260:CDS 25.0%
!! TCATGAATCTTTTTGTAAGA+TGG + chr7_4:18716428-18716447 Msa1143260:CDS 25.0%
! ATTACAAATTGTTCTAACCA+TGG + chr7_4:18715291-18715310 Msa1143260:CDS 25.0%
! AAGATTTGTGATCGAATAAA+AGG - chr7_4:18715328-18715347 None:intergenic 25.0%
!! TCAACGTAACTTTTATGAAT+AGG - chr7_4:18715610-18715629 None:intergenic 25.0%
!! ATATATTTGTCATTTGGAAG+TGG + chr7_4:18715856-18715875 Msa1143260:CDS 25.0%
! GATATTAAAACATCCATCAA+CGG + chr7_4:18716107-18716126 Msa1143260:CDS 25.0%
! ATATTAAAACATCCATCAAC+GGG + chr7_4:18716108-18716127 Msa1143260:CDS 25.0%
! TGTTTGTAGAGAAAATATAG+CGG + chr7_4:18716299-18716318 Msa1143260:CDS 25.0%
!! TCATGAATCTTTTTGTAAGA+TGG + chr7_4:18716428-18716447 Msa1143260:CDS 25.0%
!!! AAGAACTGCATGAGTTTTTT+GGG - chr7_4:18715038-18715057 None:intergenic 30.0%
TAGAACAATTTGTAATCCCA+AGG - chr7_4:18715287-18715306 None:intergenic 30.0%
! GTTATTGAAAATGGGGTTTT+AGG + chr7_4:18715709-18715728 Msa1143260:CDS 30.0%
!!! GTTTTAGGAAAGTTTGTGAA+AGG + chr7_4:18715724-18715743 Msa1143260:CDS 30.0%
TCGGTCATATATTTGTCATT+TGG + chr7_4:18715850-18715869 Msa1143260:CDS 30.0%
! GTTTTTGAATAGGACAAAAG+AGG + chr7_4:18716047-18716066 Msa1143260:CDS 30.0%
! TTTTAATATCTCAGCTTGTG+GGG - chr7_4:18716097-18716116 None:intergenic 30.0%
!! GTTTTAATATCTCAGCTTGT+GGG - chr7_4:18716098-18716117 None:intergenic 30.0%
!!! TGTTTTAATATCTCAGCTTG+TGG - chr7_4:18716099-18716118 None:intergenic 30.0%
GTTAATGAGTATAAGGTAAG+TGG + chr7_4:18716375-18716394 Msa1143260:CDS 30.0%
!!! AAGAACTGCATGAGTTTTTT+GGG - chr7_4:18715038-18715057 None:intergenic 30.0%
TAGAACAATTTGTAATCCCA+AGG - chr7_4:18715287-18715306 None:intergenic 30.0%
! GTTATTGAAAATGGGGTTTT+AGG + chr7_4:18715709-18715728 Msa1143260:CDS 30.0%
!!! GTTTTAGGAAAGTTTGTGAA+AGG + chr7_4:18715724-18715743 Msa1143260:CDS 30.0%
TCGGTCATATATTTGTCATT+TGG + chr7_4:18715850-18715869 Msa1143260:CDS 30.0%
! GTTTTTGAATAGGACAAAAG+AGG + chr7_4:18716047-18716066 Msa1143260:CDS 30.0%
! TTTTAATATCTCAGCTTGTG+GGG - chr7_4:18716097-18716116 None:intergenic 30.0%
!! GTTTTAATATCTCAGCTTGT+GGG - chr7_4:18716098-18716117 None:intergenic 30.0%
!!! TGTTTTAATATCTCAGCTTG+TGG - chr7_4:18716099-18716118 None:intergenic 30.0%
GTTAATGAGTATAAGGTAAG+TGG + chr7_4:18716375-18716394 Msa1143260:CDS 30.0%
!!! GAAGAACTGCATGAGTTTTT+TGG - chr7_4:18715039-18715058 None:intergenic 35.0%
! CTAATTCAATGGTGGGAATT+AGG - chr7_4:18715084-18715103 None:intergenic 35.0%
CTAATTCCCACCATTGAATT+AGG + chr7_4:18715082-18715101 Msa1143260:CDS 35.0%
AAGACGTTTGCCTAATTCAA+TGG - chr7_4:18715095-18715114 None:intergenic 35.0%
! AGATGGTTACGTCGAAATTT+TGG - chr7_4:18715126-18715145 None:intergenic 35.0%
! TTTTGATGTGTCTGAATCTG+AGG - chr7_4:18715167-18715186 None:intergenic 35.0%
CAATGATGTTGAGGCTATTA+GGG - chr7_4:18715216-18715235 None:intergenic 35.0%
ACAATGATGTTGAGGCTATT+AGG - chr7_4:18715217-18715236 None:intergenic 35.0%
ACAATTTGTAATCCCAAGGA+TGG - chr7_4:18715283-18715302 None:intergenic 35.0%
AAAAGGAAGAGATTCAACCA+TGG - chr7_4:18715311-18715330 None:intergenic 35.0%
! TTTTCTTTGCAACCAATGCT+TGG + chr7_4:18715440-18715459 Msa1143260:CDS 35.0%
AAAGCTTCATCTGTGATGAA+AGG - chr7_4:18715490-18715509 None:intergenic 35.0%
AGGTGCAACAAATGTTTCAA+GGG - chr7_4:18715581-18715600 None:intergenic 35.0%
AAGGTGCAACAAATGTTTCA+AGG - chr7_4:18715582-18715601 None:intergenic 35.0%
! TTGAAACATTTGTTGCACCT+TGG + chr7_4:18715581-18715600 Msa1143260:CDS 35.0%
! TGAAACATTTGTTGCACCTT+GGG + chr7_4:18715582-18715601 Msa1143260:CDS 35.0%
AAAGTTACGTTGAAGTCACA+AGG + chr7_4:18715617-18715636 Msa1143260:CDS 35.0%
AAGTTACGTTGAAGTCACAA+GGG + chr7_4:18715618-18715637 Msa1143260:CDS 35.0%
AGGGAAATATTAACCGTTGA+TGG + chr7_4:18715637-18715656 Msa1143260:CDS 35.0%
GGGAAATATTAACCGTTGAT+GGG + chr7_4:18715638-18715657 Msa1143260:CDS 35.0%
!! ATTAACCGTTGATGGGATTT+TGG + chr7_4:18715645-18715664 Msa1143260:CDS 35.0%
ACTAAGGCGGTTATTGAAAA+TGG + chr7_4:18715700-18715719 Msa1143260:CDS 35.0%
CTAAGGCGGTTATTGAAAAT+GGG + chr7_4:18715701-18715720 Msa1143260:CDS 35.0%
TAAGGCGGTTATTGAAAATG+GGG + chr7_4:18715702-18715721 Msa1143260:CDS 35.0%
!!! TAATTTTGAGTTGGCTTGAC+CGG + chr7_4:18715815-18715834 Msa1143260:CDS 35.0%
! TATTTGTCATTTGGAAGTGG+TGG + chr7_4:18715859-18715878 Msa1143260:CDS 35.0%
! ATTTGTCATTTGGAAGTGGT+GGG + chr7_4:18715860-18715879 Msa1143260:CDS 35.0%
TTGAATAGGACAAAAGAGGT+AGG + chr7_4:18716051-18716070 Msa1143260:CDS 35.0%
TGAATAGGACAAAAGAGGTA+GGG + chr7_4:18716052-18716071 Msa1143260:CDS 35.0%
!! GTGTTGGAGAGTATTCTTAA+CGG + chr7_4:18716162-18716181 Msa1143260:CDS 35.0%
!!! GAAGAACTGCATGAGTTTTT+TGG - chr7_4:18715039-18715058 None:intergenic 35.0%
! CTAATTCAATGGTGGGAATT+AGG - chr7_4:18715084-18715103 None:intergenic 35.0%
CTAATTCCCACCATTGAATT+AGG + chr7_4:18715082-18715101 Msa1143260:CDS 35.0%
AAGACGTTTGCCTAATTCAA+TGG - chr7_4:18715095-18715114 None:intergenic 35.0%
! AGATGGTTACGTCGAAATTT+TGG - chr7_4:18715126-18715145 None:intergenic 35.0%
! TTTTGATGTGTCTGAATCTG+AGG - chr7_4:18715167-18715186 None:intergenic 35.0%
CAATGATGTTGAGGCTATTA+GGG - chr7_4:18715216-18715235 None:intergenic 35.0%
ACAATGATGTTGAGGCTATT+AGG - chr7_4:18715217-18715236 None:intergenic 35.0%
ACAATTTGTAATCCCAAGGA+TGG - chr7_4:18715283-18715302 None:intergenic 35.0%
AAAAGGAAGAGATTCAACCA+TGG - chr7_4:18715311-18715330 None:intergenic 35.0%
! TTTTCTTTGCAACCAATGCT+TGG + chr7_4:18715440-18715459 Msa1143260:CDS 35.0%
AAAGCTTCATCTGTGATGAA+AGG - chr7_4:18715490-18715509 None:intergenic 35.0%
AGGTGCAACAAATGTTTCAA+GGG - chr7_4:18715581-18715600 None:intergenic 35.0%
AAGGTGCAACAAATGTTTCA+AGG - chr7_4:18715582-18715601 None:intergenic 35.0%
! TTGAAACATTTGTTGCACCT+TGG + chr7_4:18715581-18715600 Msa1143260:CDS 35.0%
! TGAAACATTTGTTGCACCTT+GGG + chr7_4:18715582-18715601 Msa1143260:CDS 35.0%
AAAGTTACGTTGAAGTCACA+AGG + chr7_4:18715617-18715636 Msa1143260:CDS 35.0%
AAGTTACGTTGAAGTCACAA+GGG + chr7_4:18715618-18715637 Msa1143260:CDS 35.0%
AGGGAAATATTAACCGTTGA+TGG + chr7_4:18715637-18715656 Msa1143260:CDS 35.0%
GGGAAATATTAACCGTTGAT+GGG + chr7_4:18715638-18715657 Msa1143260:CDS 35.0%
!! ATTAACCGTTGATGGGATTT+TGG + chr7_4:18715645-18715664 Msa1143260:CDS 35.0%
ACTAAGGCGGTTATTGAAAA+TGG + chr7_4:18715700-18715719 Msa1143260:CDS 35.0%
CTAAGGCGGTTATTGAAAAT+GGG + chr7_4:18715701-18715720 Msa1143260:CDS 35.0%
TAAGGCGGTTATTGAAAATG+GGG + chr7_4:18715702-18715721 Msa1143260:CDS 35.0%
!!! TAATTTTGAGTTGGCTTGAC+CGG + chr7_4:18715815-18715834 Msa1143260:CDS 35.0%
! TATTTGTCATTTGGAAGTGG+TGG + chr7_4:18715859-18715878 Msa1143260:CDS 35.0%
! ATTTGTCATTTGGAAGTGGT+GGG + chr7_4:18715860-18715879 Msa1143260:CDS 35.0%
TTGAATAGGACAAAAGAGGT+AGG + chr7_4:18716051-18716070 Msa1143260:CDS 35.0%
TGAATAGGACAAAAGAGGTA+GGG + chr7_4:18716052-18716071 Msa1143260:CDS 35.0%
!! GTGTTGGAGAGTATTCTTAA+CGG + chr7_4:18716162-18716181 Msa1143260:CDS 35.0%
CGTTTGCCTAATTCAATGGT+GGG - chr7_4:18715091-18715110 None:intergenic 40.0%
ACGTTTGCCTAATTCAATGG+TGG - chr7_4:18715092-18715111 None:intergenic 40.0%
!! GGTTACGTCGAAATTTTGGT+GGG - chr7_4:18715122-18715141 None:intergenic 40.0%
! TGGTTACGTCGAAATTTTGG+TGG - chr7_4:18715123-18715142 None:intergenic 40.0%
! GAGGTGTTACAATGATGTTG+AGG - chr7_4:18715225-18715244 None:intergenic 40.0%
!! ATCCCAAGGATGGATTGTTT+GGG - chr7_4:18715273-18715292 None:intergenic 40.0%
!! AATCCCAAGGATGGATTGTT+TGG - chr7_4:18715274-18715293 None:intergenic 40.0%
AACAGATGGAGGATTCTTCA+TGG - chr7_4:18715353-18715372 None:intergenic 40.0%
CTTCATCTGTGATGAAAGGA+AGG - chr7_4:18715486-18715505 None:intergenic 40.0%
TCACAACCAAGAATCGAAAG+CGG - chr7_4:18715538-18715557 None:intergenic 40.0%
TTCGATTCTTGGTTGTGAAC+CGG + chr7_4:18715540-18715559 Msa1143260:CDS 40.0%
! GAAACATTTGTTGCACCTTG+GGG + chr7_4:18715583-18715602 Msa1143260:CDS 40.0%
! CTTTTATGAATAGGTCCCCA+AGG - chr7_4:18715601-18715620 None:intergenic 40.0%
GTTCACCAAAATCCCATCAA+CGG - chr7_4:18715653-18715672 None:intergenic 40.0%
AGGAAAGTTTGTGAAAGGAC+CGG + chr7_4:18715729-18715748 Msa1143260:CDS 40.0%
! AAATATATGACCGACTCAGC+CGG - chr7_4:18715844-18715863 None:intergenic 40.0%
TGAGTCAGCAGCGATTTATT+TGG + chr7_4:18715929-18715948 Msa1143260:CDS 40.0%
GAGTCAGCAGCGATTTATTT+GGG + chr7_4:18715930-18715949 Msa1143260:CDS 40.0%
TTAAAACATCCATCAACGGG+TGG + chr7_4:18716111-18716130 Msa1143260:CDS 40.0%
TATTCTTAACGGTGTTCCGA+TGG + chr7_4:18716173-18716192 Msa1143260:CDS 40.0%
ATCTTCTGCTCTGCATAAAG+CGG - chr7_4:18716207-18716226 None:intergenic 40.0%
GAATGCTACCATGTTATCAG+AGG + chr7_4:18716227-18716246 Msa1143260:CDS 40.0%
GGAAGTGATTAGAAGAGTGA+TGG + chr7_4:18716320-18716339 Msa1143260:CDS 40.0%
!! AGAGTGATGGTTGATGAAGA+AGG + chr7_4:18716333-18716352 Msa1143260:CDS 40.0%
TGTGAACTTTATCTCCACCA+AGG + chr7_4:18716459-18716478 Msa1143260:CDS 40.0%
CGTTTGCCTAATTCAATGGT+GGG - chr7_4:18715091-18715110 None:intergenic 40.0%
ACGTTTGCCTAATTCAATGG+TGG - chr7_4:18715092-18715111 None:intergenic 40.0%
!! GGTTACGTCGAAATTTTGGT+GGG - chr7_4:18715122-18715141 None:intergenic 40.0%
! TGGTTACGTCGAAATTTTGG+TGG - chr7_4:18715123-18715142 None:intergenic 40.0%
! GAGGTGTTACAATGATGTTG+AGG - chr7_4:18715225-18715244 None:intergenic 40.0%
!! ATCCCAAGGATGGATTGTTT+GGG - chr7_4:18715273-18715292 None:intergenic 40.0%
!! AATCCCAAGGATGGATTGTT+TGG - chr7_4:18715274-18715293 None:intergenic 40.0%
AACAGATGGAGGATTCTTCA+TGG - chr7_4:18715353-18715372 None:intergenic 40.0%
CTTCATCTGTGATGAAAGGA+AGG - chr7_4:18715486-18715505 None:intergenic 40.0%
TCACAACCAAGAATCGAAAG+CGG - chr7_4:18715538-18715557 None:intergenic 40.0%
TTCGATTCTTGGTTGTGAAC+CGG + chr7_4:18715540-18715559 Msa1143260:CDS 40.0%
! GAAACATTTGTTGCACCTTG+GGG + chr7_4:18715583-18715602 Msa1143260:CDS 40.0%
! CTTTTATGAATAGGTCCCCA+AGG - chr7_4:18715601-18715620 None:intergenic 40.0%
GTTCACCAAAATCCCATCAA+CGG - chr7_4:18715653-18715672 None:intergenic 40.0%
AGGAAAGTTTGTGAAAGGAC+CGG + chr7_4:18715729-18715748 Msa1143260:CDS 40.0%
! AAATATATGACCGACTCAGC+CGG - chr7_4:18715844-18715863 None:intergenic 40.0%
TGAGTCAGCAGCGATTTATT+TGG + chr7_4:18715929-18715948 Msa1143260:CDS 40.0%
GAGTCAGCAGCGATTTATTT+GGG + chr7_4:18715930-18715949 Msa1143260:CDS 40.0%
TTAAAACATCCATCAACGGG+TGG + chr7_4:18716111-18716130 Msa1143260:CDS 40.0%
TATTCTTAACGGTGTTCCGA+TGG + chr7_4:18716173-18716192 Msa1143260:CDS 40.0%
ATCTTCTGCTCTGCATAAAG+CGG - chr7_4:18716207-18716226 None:intergenic 40.0%
GAATGCTACCATGTTATCAG+AGG + chr7_4:18716227-18716246 Msa1143260:CDS 40.0%
GGAAGTGATTAGAAGAGTGA+TGG + chr7_4:18716320-18716339 Msa1143260:CDS 40.0%
!! AGAGTGATGGTTGATGAAGA+AGG + chr7_4:18716333-18716352 Msa1143260:CDS 40.0%
TGTGAACTTTATCTCCACCA+AGG + chr7_4:18716459-18716478 Msa1143260:CDS 40.0%
!! TACGTCGAAATTTTGGTGGG+TGG - chr7_4:18715119-18715138 None:intergenic 45.0%
TGATGTGTCTGAATCTGAGG+TGG - chr7_4:18715164-18715183 None:intergenic 45.0%
AGTTTGTCAGAGACATCGAC+AGG - chr7_4:18715247-18715266 None:intergenic 45.0%
TGACCCAAACAATCCATCCT+TGG + chr7_4:18715267-18715286 Msa1143260:CDS 45.0%
GACCCAAACAATCCATCCTT+GGG + chr7_4:18715268-18715287 Msa1143260:CDS 45.0%
TCCTCCATCTGTTCTTATCG+TGG + chr7_4:18715360-18715379 Msa1143260:CDS 45.0%
TCCACGATAAGAACAGATGG+AGG - chr7_4:18715364-18715383 None:intergenic 45.0%
AGGTCCACGATAAGAACAGA+TGG - chr7_4:18715367-18715386 None:intergenic 45.0%
GTTCTTATCGTGGACCTCTT+TGG + chr7_4:18715370-18715389 Msa1143260:CDS 45.0%
GAAAAGCTGCAGTACCAAAG+AGG - chr7_4:18715387-18715406 None:intergenic 45.0%
AACAGCAGTGAACCAAGCAT+TGG - chr7_4:18715455-18715474 None:intergenic 45.0%
GCGGTTCATGATTCTTAGCA+TGG - chr7_4:18715519-18715538 None:intergenic 45.0%
CATGAACCGCTTTCGATTCT+TGG + chr7_4:18715529-18715548 Msa1143260:CDS 45.0%
TTCTTGGTTGTGAACCGGTT+CGG + chr7_4:18715545-18715564 Msa1143260:CDS 45.0%
!! ATGGGATTTTGGTGAACACG+TGG + chr7_4:18715656-18715675 Msa1143260:CDS 45.0%
ATAACCGCCTTAGTAGCTGT+TGG - chr7_4:18715694-18715713 None:intergenic 45.0%
! AAAGGACCGGTTTATCCGAT+TGG + chr7_4:18715742-18715761 Msa1143260:CDS 45.0%
GTTCTTACTAGCGGTCCAAT+CGG - chr7_4:18715760-18715779 None:intergenic 45.0%
!! GGTTCATCGGTTCTTACTAG+CGG - chr7_4:18715769-18715788 None:intergenic 45.0%
AAGAACCGATGAACCGAAGA+AGG + chr7_4:18715774-18715793 Msa1143260:CDS 45.0%
AGAACCGATGAACCGAAGAA+GGG + chr7_4:18715775-18715794 Msa1143260:CDS 45.0%
CATGTCGGAAGGTCAAATGA+GGG + chr7_4:18715885-18715904 Msa1143260:CDS 45.0%
! CAAATGAGGGAGTTGGCTTA+CGG + chr7_4:18715898-18715917 Msa1143260:CDS 45.0%
TCAGCAGCGATTTATTTGGG+TGG + chr7_4:18715933-18715952 Msa1143260:CDS 45.0%
AGCGATTTATTTGGGTGGTG+CGG + chr7_4:18715938-18715957 Msa1143260:CDS 45.0%
CGCAACGTTGAAAAACGTTG+CGG - chr7_4:18715986-18716005 None:intergenic 45.0%
!! CGCAACGTTTTTCAACGTTG+CGG + chr7_4:18715984-18716003 Msa1143260:CDS 45.0%
!! GCAACGTTTTTCAACGTTGC+GGG + chr7_4:18715985-18716004 Msa1143260:CDS 45.0%
!! AACTGTGGTGGATTACTTGC+CGG + chr7_4:18716020-18716039 Msa1143260:CDS 45.0%
GTCCTATTCAAAAACCCCTC+CGG - chr7_4:18716042-18716061 None:intergenic 45.0%
! GTTTTGTGACACACTGTGGT+TGG + chr7_4:18716133-18716152 Msa1143260:CDS 45.0%
CTGTGGTTGGAATTCTGTGT+TGG + chr7_4:18716146-18716165 Msa1143260:CDS 45.0%
ACCATGTTATCAGAGGAGCT+TGG + chr7_4:18716234-18716253 Msa1143260:CDS 45.0%
ACCAAGCTCCTCTGATAACA+TGG - chr7_4:18716238-18716257 None:intergenic 45.0%
GAGAAAGCTTCGTCTGTGTT+TGG + chr7_4:18716399-18716418 Msa1143260:CDS 45.0%
! AAGGATCTGAAGCCAAAGCT+CGG + chr7_4:18716478-18716497 Msa1143260:CDS 45.0%
!! TACGTCGAAATTTTGGTGGG+TGG - chr7_4:18715119-18715138 None:intergenic 45.0%
TGATGTGTCTGAATCTGAGG+TGG - chr7_4:18715164-18715183 None:intergenic 45.0%
AGTTTGTCAGAGACATCGAC+AGG - chr7_4:18715247-18715266 None:intergenic 45.0%
TGACCCAAACAATCCATCCT+TGG + chr7_4:18715267-18715286 Msa1143260:CDS 45.0%
GACCCAAACAATCCATCCTT+GGG + chr7_4:18715268-18715287 Msa1143260:CDS 45.0%
TCCTCCATCTGTTCTTATCG+TGG + chr7_4:18715360-18715379 Msa1143260:CDS 45.0%
TCCACGATAAGAACAGATGG+AGG - chr7_4:18715364-18715383 None:intergenic 45.0%
AGGTCCACGATAAGAACAGA+TGG - chr7_4:18715367-18715386 None:intergenic 45.0%
GTTCTTATCGTGGACCTCTT+TGG + chr7_4:18715370-18715389 Msa1143260:CDS 45.0%
GAAAAGCTGCAGTACCAAAG+AGG - chr7_4:18715387-18715406 None:intergenic 45.0%
AACAGCAGTGAACCAAGCAT+TGG - chr7_4:18715455-18715474 None:intergenic 45.0%
GCGGTTCATGATTCTTAGCA+TGG - chr7_4:18715519-18715538 None:intergenic 45.0%
CATGAACCGCTTTCGATTCT+TGG + chr7_4:18715529-18715548 Msa1143260:CDS 45.0%
TTCTTGGTTGTGAACCGGTT+CGG + chr7_4:18715545-18715564 Msa1143260:CDS 45.0%
!! ATGGGATTTTGGTGAACACG+TGG + chr7_4:18715656-18715675 Msa1143260:CDS 45.0%
ATAACCGCCTTAGTAGCTGT+TGG - chr7_4:18715694-18715713 None:intergenic 45.0%
! AAAGGACCGGTTTATCCGAT+TGG + chr7_4:18715742-18715761 Msa1143260:CDS 45.0%
GTTCTTACTAGCGGTCCAAT+CGG - chr7_4:18715760-18715779 None:intergenic 45.0%
!! GGTTCATCGGTTCTTACTAG+CGG - chr7_4:18715769-18715788 None:intergenic 45.0%
AAGAACCGATGAACCGAAGA+AGG + chr7_4:18715774-18715793 Msa1143260:CDS 45.0%
AGAACCGATGAACCGAAGAA+GGG + chr7_4:18715775-18715794 Msa1143260:CDS 45.0%
CATGTCGGAAGGTCAAATGA+GGG + chr7_4:18715885-18715904 Msa1143260:CDS 45.0%
! CAAATGAGGGAGTTGGCTTA+CGG + chr7_4:18715898-18715917 Msa1143260:CDS 45.0%
TCAGCAGCGATTTATTTGGG+TGG + chr7_4:18715933-18715952 Msa1143260:CDS 45.0%
AGCGATTTATTTGGGTGGTG+CGG + chr7_4:18715938-18715957 Msa1143260:CDS 45.0%
CGCAACGTTGAAAAACGTTG+CGG - chr7_4:18715986-18716005 None:intergenic 45.0%
!! CGCAACGTTTTTCAACGTTG+CGG + chr7_4:18715984-18716003 Msa1143260:CDS 45.0%
!! GCAACGTTTTTCAACGTTGC+GGG + chr7_4:18715985-18716004 Msa1143260:CDS 45.0%
!! AACTGTGGTGGATTACTTGC+CGG + chr7_4:18716020-18716039 Msa1143260:CDS 45.0%
GTCCTATTCAAAAACCCCTC+CGG - chr7_4:18716042-18716061 None:intergenic 45.0%
! GTTTTGTGACACACTGTGGT+TGG + chr7_4:18716133-18716152 Msa1143260:CDS 45.0%
CTGTGGTTGGAATTCTGTGT+TGG + chr7_4:18716146-18716165 Msa1143260:CDS 45.0%
ACCATGTTATCAGAGGAGCT+TGG + chr7_4:18716234-18716253 Msa1143260:CDS 45.0%
ACCAAGCTCCTCTGATAACA+TGG - chr7_4:18716238-18716257 None:intergenic 45.0%
GAGAAAGCTTCGTCTGTGTT+TGG + chr7_4:18716399-18716418 Msa1143260:CDS 45.0%
! AAGGATCTGAAGCCAAAGCT+CGG + chr7_4:18716478-18716497 Msa1143260:CDS 45.0%
! TGTGTCTGAATCTGAGGTGG+CGG - chr7_4:18715161-18715180 None:intergenic 50.0%
TTGTCAGAGACATCGACAGG+AGG - chr7_4:18715244-18715263 None:intergenic 50.0%
! TGGTACTGCAGCTTTTCCCA+TGG + chr7_4:18715390-18715409 Msa1143260:CDS 50.0%
ATGTGCAACTCACGTGCCAT+GGG - chr7_4:18715409-18715428 None:intergenic 50.0%
!! TTGTGAACCGGTTCGGTTTG+AGG + chr7_4:18715552-18715571 Msa1143260:CDS 50.0%
! AGGGTATCCTCAAACCGAAC+CGG - chr7_4:18715562-18715581 None:intergenic 50.0%
! TCTGGAGCCAACAGCTACTA+AGG + chr7_4:18715684-18715703 Msa1143260:CDS 50.0%
AGCGGTCCAATCGGATAAAC+CGG - chr7_4:18715751-18715770 None:intergenic 50.0%
ACCACCCTTCTTCGGTTCAT+CGG - chr7_4:18715782-18715801 None:intergenic 50.0%
TCACTCTCACCACCCTTCTT+CGG - chr7_4:18715790-18715809 None:intergenic 50.0%
CCTCATTTGACCTTCCGACA+TGG - chr7_4:18715887-18715906 None:intergenic 50.0%
CCATGTCGGAAGGTCAAATG+AGG + chr7_4:18715884-18715903 Msa1143260:CDS 50.0%
GGAAGGTCAAATGAGGGAGT+TGG + chr7_4:18715891-18715910 Msa1143260:CDS 50.0%
GATTTATTTGGGTGGTGCGG+CGG + chr7_4:18715941-18715960 Msa1143260:CDS 50.0%
GCGGATGCATTATCCTCTGT+GGG - chr7_4:18715967-18715986 None:intergenic 50.0%
TGCGGATGCATTATCCTCTG+TGG - chr7_4:18715968-18715987 None:intergenic 50.0%
TGCAGATGGAACAACTGTGG+TGG + chr7_4:18716008-18716027 Msa1143260:CDS 50.0%
! TGCCGGAGGGGTTTTTGAAT+AGG + chr7_4:18716037-18716056 Msa1143260:CDS 50.0%
! TAGGGCTTTGTGTTCCCATG+TGG + chr7_4:18716070-18716089 Msa1143260:CDS 50.0%
! AGGGCTTTGTGTTCCCATGT+GGG + chr7_4:18716071-18716090 Msa1143260:CDS 50.0%
GTCACAAAACCACCCGTTGA+TGG - chr7_4:18716123-18716142 None:intergenic 50.0%
!!! GGTGGTTTTGTGACACACTG+TGG + chr7_4:18716129-18716148 Msa1143260:CDS 50.0%
TAAAGCGGCCATGCAACCAT+CGG - chr7_4:18716192-18716211 None:intergenic 50.0%
! GTTATCAGAGGAGCTTGGTG+TGG + chr7_4:18716239-18716258 Msa1143260:CDS 50.0%
! CTTTGGCTTCAGATCCTTGG+TGG - chr7_4:18716476-18716495 None:intergenic 50.0%
! GAGCTTTGGCTTCAGATCCT+TGG - chr7_4:18716479-18716498 None:intergenic 50.0%
! AGGATCTGAAGCCAAAGCTC+GGG + chr7_4:18716479-18716498 Msa1143260:CDS 50.0%
! TGTGTCTGAATCTGAGGTGG+CGG - chr7_4:18715161-18715180 None:intergenic 50.0%
TTGTCAGAGACATCGACAGG+AGG - chr7_4:18715244-18715263 None:intergenic 50.0%
! TGGTACTGCAGCTTTTCCCA+TGG + chr7_4:18715390-18715409 Msa1143260:CDS 50.0%
ATGTGCAACTCACGTGCCAT+GGG - chr7_4:18715409-18715428 None:intergenic 50.0%
!! TTGTGAACCGGTTCGGTTTG+AGG + chr7_4:18715552-18715571 Msa1143260:CDS 50.0%
! AGGGTATCCTCAAACCGAAC+CGG - chr7_4:18715562-18715581 None:intergenic 50.0%
! TCTGGAGCCAACAGCTACTA+AGG + chr7_4:18715684-18715703 Msa1143260:CDS 50.0%
AGCGGTCCAATCGGATAAAC+CGG - chr7_4:18715751-18715770 None:intergenic 50.0%
ACCACCCTTCTTCGGTTCAT+CGG - chr7_4:18715782-18715801 None:intergenic 50.0%
TCACTCTCACCACCCTTCTT+CGG - chr7_4:18715790-18715809 None:intergenic 50.0%
CCTCATTTGACCTTCCGACA+TGG - chr7_4:18715887-18715906 None:intergenic 50.0%
CCATGTCGGAAGGTCAAATG+AGG + chr7_4:18715884-18715903 Msa1143260:CDS 50.0%
GGAAGGTCAAATGAGGGAGT+TGG + chr7_4:18715891-18715910 Msa1143260:CDS 50.0%
GATTTATTTGGGTGGTGCGG+CGG + chr7_4:18715941-18715960 Msa1143260:CDS 50.0%
GCGGATGCATTATCCTCTGT+GGG - chr7_4:18715967-18715986 None:intergenic 50.0%
TGCGGATGCATTATCCTCTG+TGG - chr7_4:18715968-18715987 None:intergenic 50.0%
TGCAGATGGAACAACTGTGG+TGG + chr7_4:18716008-18716027 Msa1143260:CDS 50.0%
! TGCCGGAGGGGTTTTTGAAT+AGG + chr7_4:18716037-18716056 Msa1143260:CDS 50.0%
! TAGGGCTTTGTGTTCCCATG+TGG + chr7_4:18716070-18716089 Msa1143260:CDS 50.0%
! AGGGCTTTGTGTTCCCATGT+GGG + chr7_4:18716071-18716090 Msa1143260:CDS 50.0%
GTCACAAAACCACCCGTTGA+TGG - chr7_4:18716123-18716142 None:intergenic 50.0%
!!! GGTGGTTTTGTGACACACTG+TGG + chr7_4:18716129-18716148 Msa1143260:CDS 50.0%
TAAAGCGGCCATGCAACCAT+CGG - chr7_4:18716192-18716211 None:intergenic 50.0%
! GTTATCAGAGGAGCTTGGTG+TGG + chr7_4:18716239-18716258 Msa1143260:CDS 50.0%
! CTTTGGCTTCAGATCCTTGG+TGG - chr7_4:18716476-18716495 None:intergenic 50.0%
! GAGCTTTGGCTTCAGATCCT+TGG - chr7_4:18716479-18716498 None:intergenic 50.0%
! AGGATCTGAAGCCAAAGCTC+GGG + chr7_4:18716479-18716498 Msa1143260:CDS 50.0%
GCAGTTCTTCTAGCCAGTCC+TGG + chr7_4:18715049-18715068 Msa1143260:CDS 55.0%
TCTTCTAGCCAGTCCTGGCA+TGG + chr7_4:18715054-18715073 Msa1143260:CDS 55.0%
CTTCTAGCCAGTCCTGGCAT+GGG + chr7_4:18715055-18715074 Msa1143260:CDS 55.0%
GGAATTAGGTGTCCCATGCC+AGG - chr7_4:18715070-18715089 None:intergenic 55.0%
CATGTGCAACTCACGTGCCA+TGG - chr7_4:18715410-18715429 None:intergenic 55.0%
GGTGAACACGTGGCAAGATC+TGG + chr7_4:18715666-18715685 Msa1143260:CDS 55.0%
GGAGCCAACAGCTACTAAGG+CGG + chr7_4:18715687-18715706 Msa1143260:CDS 55.0%
ACCGATGAACCGAAGAAGGG+TGG + chr7_4:18715778-18715797 Msa1143260:CDS 55.0%
! TGGAAGTGGTGGGACCATGT+CGG + chr7_4:18715870-18715889 Msa1143260:CDS 55.0%
! GAGGGAGTTGGCTTACGGTT+TGG + chr7_4:18715903-18715922 Msa1143260:CDS 55.0%
TTCAACGTTGCGGGTGCAGA+TGG + chr7_4:18715994-18716013 Msa1143260:CDS 55.0%
GGGTGCAGATGGAACAACTG+TGG + chr7_4:18716005-18716024 Msa1143260:CDS 55.0%
!! TGTGGTGGATTACTTGCCGG+AGG + chr7_4:18716023-18716042 Msa1143260:CDS 55.0%
!! GTGGTGGATTACTTGCCGGA+GGG + chr7_4:18716024-18716043 Msa1143260:CDS 55.0%
!! TGGTGGATTACTTGCCGGAG+GGG + chr7_4:18716025-18716044 Msa1143260:CDS 55.0%
ACGGTGTTCCGATGGTTGCA+TGG + chr7_4:18716181-18716200 Msa1143260:CDS 55.0%
!! ATCAGAGGAGCTTGGTGTGG+CGG + chr7_4:18716242-18716261 Msa1143260:CDS 55.0%
! GGATCTGAAGCCAAAGCTCG+GGG + chr7_4:18716480-18716499 Msa1143260:CDS 55.0%
GCAGTTCTTCTAGCCAGTCC+TGG + chr7_4:18715049-18715068 Msa1143260:CDS 55.0%
TCTTCTAGCCAGTCCTGGCA+TGG + chr7_4:18715054-18715073 Msa1143260:CDS 55.0%
CTTCTAGCCAGTCCTGGCAT+GGG + chr7_4:18715055-18715074 Msa1143260:CDS 55.0%
GGAATTAGGTGTCCCATGCC+AGG - chr7_4:18715070-18715089 None:intergenic 55.0%
CATGTGCAACTCACGTGCCA+TGG - chr7_4:18715410-18715429 None:intergenic 55.0%
GGTGAACACGTGGCAAGATC+TGG + chr7_4:18715666-18715685 Msa1143260:CDS 55.0%
GGAGCCAACAGCTACTAAGG+CGG + chr7_4:18715687-18715706 Msa1143260:CDS 55.0%
ACCGATGAACCGAAGAAGGG+TGG + chr7_4:18715778-18715797 Msa1143260:CDS 55.0%
! TGGAAGTGGTGGGACCATGT+CGG + chr7_4:18715870-18715889 Msa1143260:CDS 55.0%
! GAGGGAGTTGGCTTACGGTT+TGG + chr7_4:18715903-18715922 Msa1143260:CDS 55.0%
TTCAACGTTGCGGGTGCAGA+TGG + chr7_4:18715994-18716013 Msa1143260:CDS 55.0%
GGGTGCAGATGGAACAACTG+TGG + chr7_4:18716005-18716024 Msa1143260:CDS 55.0%
!! TGTGGTGGATTACTTGCCGG+AGG + chr7_4:18716023-18716042 Msa1143260:CDS 55.0%
!! GTGGTGGATTACTTGCCGGA+GGG + chr7_4:18716024-18716043 Msa1143260:CDS 55.0%
!! TGGTGGATTACTTGCCGGAG+GGG + chr7_4:18716025-18716044 Msa1143260:CDS 55.0%
ACGGTGTTCCGATGGTTGCA+TGG + chr7_4:18716181-18716200 Msa1143260:CDS 55.0%
!! ATCAGAGGAGCTTGGTGTGG+CGG + chr7_4:18716242-18716261 Msa1143260:CDS 55.0%
! GGATCTGAAGCCAAAGCTCG+GGG + chr7_4:18716480-18716499 Msa1143260:CDS 55.0%
TAGGTGTCCCATGCCAGGAC+TGG - chr7_4:18715065-18715084 None:intergenic 60.0%
GGCGGTTGTGACGACGAAGA+TGG - chr7_4:18715143-18715162 None:intergenic 60.0%
!! GAGTTGGCTTGACCGGCAAC+CGG + chr7_4:18715822-18715841 Msa1143260:CDS 60.0%
! AGTGGTGGGACCATGTCGGA+AGG + chr7_4:18715874-18715893 Msa1143260:CDS 60.0%
TCAGCTTGTGGGGCCCACAT+GGG - chr7_4:18716087-18716106 None:intergenic 60.0%
GGCGGTGAAGGCAACGACAA+CGG + chr7_4:18716260-18716279 Msa1143260:CDS 60.0%
GGTGAAGGCAACGACAACGG+TGG + chr7_4:18716263-18716282 Msa1143260:CDS 60.0%
GAAGGCAACGACAACGGTGG+CGG + chr7_4:18716266-18716285 Msa1143260:CDS 60.0%
TAGGTGTCCCATGCCAGGAC+TGG - chr7_4:18715065-18715084 None:intergenic 60.0%
GGCGGTTGTGACGACGAAGA+TGG - chr7_4:18715143-18715162 None:intergenic 60.0%
!! GAGTTGGCTTGACCGGCAAC+CGG + chr7_4:18715822-18715841 Msa1143260:CDS 60.0%
! AGTGGTGGGACCATGTCGGA+AGG + chr7_4:18715874-18715893 Msa1143260:CDS 60.0%
TCAGCTTGTGGGGCCCACAT+GGG - chr7_4:18716087-18716106 None:intergenic 60.0%
GGCGGTGAAGGCAACGACAA+CGG + chr7_4:18716260-18716279 Msa1143260:CDS 60.0%
GGTGAAGGCAACGACAACGG+TGG + chr7_4:18716263-18716282 Msa1143260:CDS 60.0%
GAAGGCAACGACAACGGTGG+CGG + chr7_4:18716266-18716285 Msa1143260:CDS 60.0%
TGACCGGCAACCGGCTGAGT+CGG + chr7_4:18715831-18715850 Msa1143260:CDS 65.0%
! TGACCGACTCAGCCGGTTGC+CGG - chr7_4:18715837-18715856 None:intergenic 65.0%
CTCAGCTTGTGGGGCCCACA+TGG - chr7_4:18716088-18716107 None:intergenic 65.0%
!! GGAGCTTGGTGTGGCGGTGA+AGG + chr7_4:18716248-18716267 Msa1143260:CDS 65.0%
!! GCAACGACAACGGTGGCGGA+GGG + chr7_4:18716270-18716289 Msa1143260:CDS 65.0%
TGACCGGCAACCGGCTGAGT+CGG + chr7_4:18715831-18715850 Msa1143260:CDS 65.0%
! TGACCGACTCAGCCGGTTGC+CGG - chr7_4:18715837-18715856 None:intergenic 65.0%
CTCAGCTTGTGGGGCCCACA+TGG - chr7_4:18716088-18716107 None:intergenic 65.0%
!! GGAGCTTGGTGTGGCGGTGA+AGG + chr7_4:18716248-18716267 Msa1143260:CDS 65.0%
!! GCAACGACAACGGTGGCGGA+GGG + chr7_4:18716270-18716289 Msa1143260:CDS 65.0%
! GGCAACGACAACGGTGGCGG+AGG + chr7_4:18716269-18716288 Msa1143260:CDS 70.0%
!! ACGACAACGGTGGCGGAGGG+TGG + chr7_4:18716273-18716292 Msa1143260:CDS 70.0%
! GGCAACGACAACGGTGGCGG+AGG + chr7_4:18716269-18716288 Msa1143260:CDS 70.0%
!! ACGACAACGGTGGCGGAGGG+TGG + chr7_4:18716273-18716292 Msa1143260:CDS 70.0%
! GGTGGTGCGGCGGCCCACAG+AGG + chr7_4:18715951-18715970 Msa1143260:CDS 80.0%
! GGTGGTGCGGCGGCCCACAG+AGG + chr7_4:18715951-18715970 Msa1143260:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 18715028 18716509 18715028 ID=Msa1143260;Name=Msa1143260
chr7_4 mRNA 18715028 18716509 18715028 ID=Msa1143260-mRNA-1;Parent=Msa1143260;Name=Msa1143260-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|493
chr7_4 exon 18715028 18716509 18715028 ID=Msa1143260-mRNA-1:exon:4119;Parent=Msa1143260-mRNA-1
chr7_4 CDS 18715028 18716509 18715028 ID=Msa1143260-mRNA-1:cds;Parent=Msa1143260-mRNA-1
Gene Sequence

>Msa1143260

ATGGTGTCCCAAAAAACTCATGCAGTTCTTCTAGCCAGTCCTGGCATGGGACACCTAATTCCCACCATTGAATTAGGCAAACGTCTTACCACCCACCAAAATTTCGACGTAACCATCTTCGTCGTCACAACCGCCACCTCAGATTCAGACACATCAAAATCACATATACTTCAACAAATATCAAGCCCTAATAGCCTCAACATCATTGTAACACCTCCTGTCGATGTCTCTGACAAACTTGACCCAAACAATCCATCCTTGGGATTACAAATTGTTCTAACCATGGTTGAATCTCTTCCTTTTATTCGATCACAAATCTTATCCATGAAGAATCCTCCATCTGTTCTTATCGTGGACCTCTTTGGTACTGCAGCTTTTCCCATGGCACGTGAGTTGCACATGTCTTGTTACGTTTTCTTTGCAACCAATGCTTGGTTCACTGCTGTTAACTTATACCTTCCTTTCATCACAGATGAAGCTTTTTCACGCCATGCTAAGAATCATGAACCGCTTTCGATTCTTGGTTGTGAACCGGTTCGGTTTGAGGATACCCTTGAAACATTTGTTGCACCTTGGGGACCTATTCATAAAAGTTACGTTGAAGTCACAAGGGAAATATTAACCGTTGATGGGATTTTGGTGAACACGTGGCAAGATCTGGAGCCAACAGCTACTAAGGCGGTTATTGAAAATGGGGTTTTAGGAAAGTTTGTGAAAGGACCGGTTTATCCGATTGGACCGCTAGTAAGAACCGATGAACCGAAGAAGGGTGGTGAGAGTGAAAATTTAATTTTGAGTTGGCTTGACCGGCAACCGGCTGAGTCGGTCATATATTTGTCATTTGGAAGTGGTGGGACCATGTCGGAAGGTCAAATGAGGGAGTTGGCTTACGGTTTGGAGCTGAGTCAGCAGCGATTTATTTGGGTGGTGCGGCGGCCCACAGAGGATAATGCATCCGCAACGTTTTTCAACGTTGCGGGTGCAGATGGAACAACTGTGGTGGATTACTTGCCGGAGGGGTTTTTGAATAGGACAAAAGAGGTAGGGCTTTGTGTTCCCATGTGGGCCCCACAAGCTGAGATATTAAAACATCCATCAACGGGTGGTTTTGTGACACACTGTGGTTGGAATTCTGTGTTGGAGAGTATTCTTAACGGTGTTCCGATGGTTGCATGGCCGCTTTATGCAGAGCAGAAGATGAATGCTACCATGTTATCAGAGGAGCTTGGTGTGGCGGTGAAGGCAACGACAACGGTGGCGGAGGGTGGTGTTGTTTGTAGAGAAAATATAGCGGAAGTGATTAGAAGAGTGATGGTTGATGAAGAAGGTGTAGCTATGAGAGTTAAAGTTAATGAGTATAAGGTAAGTGGAGAGAAAGCTTCGTCTGTGTTTGGTTCTTCTCATGAATCTTTTTGTAAGATGGCAAAAGATTGTGAACTTTATCTCCACCAAGGATCTGAAGCCAAAGCTCGGGGTGCTTAA

Protein sequence

>Msa1143260

MVSQKTHAVLLASPGMGHLIPTIELGKRLTTHQNFDVTIFVVTTATSDSDTSKSHILQQISSPNSLNIIVTPPVDVSDKLDPNNPSLGLQIVLTMVESLPFIRSQILSMKNPPSVLIVDLFGTAAFPMARELHMSCYVFFATNAWFTAVNLYLPFITDEAFSRHAKNHEPLSILGCEPVRFEDTLETFVAPWGPIHKSYVEVTREILTVDGILVNTWQDLEPTATKAVIENGVLGKFVKGPVYPIGPLVRTDEPKKGGESENLILSWLDRQPAESVIYLSFGSGGTMSEGQMRELAYGLELSQQRFIWVVRRPTEDNASATFFNVAGADGTTVVDYLPEGFLNRTKEVGLCVPMWAPQAEILKHPSTGGFVTHCGWNSVLESILNGVPMVAWPLYAEQKMNATMLSEELGVAVKATTTVAEGGVVCRENIAEVIRRVMVDEEGVAMRVKVNEYKVSGEKASSVFGSSHESFCKMAKDCELYLHQGSEAKARGA*