AlfalfaGEDB | Msa0693600

M. sativa cultivar zhongmu-4 / Msa0693600

KEGG: K00876
GO: GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0693600	XP_039688500.1	91.447	152	1	1	58	209	751	890	3.93e-82	272

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0693600	A0A072UMH7	91.447	152	1	1	58	209	811	950	5.79e-82	271

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004880	Msa0693600	0.816906	4.342698e-52	-8.615850e-47
Msa0012060	Msa0693600	0.806532	7.856918e-50	-8.615850e-47
Msa0017510	Msa0693600	0.801912	7.197496e-49	-8.615850e-47
Msa0020930	Msa0693600	0.800415	1.457142e-48	-8.615850e-47
Msa0031340	Msa0693600	0.818999	1.461790e-52	-8.615850e-47
Msa0036140	Msa0693600	0.804752	1.857602e-49	-8.615850e-47
Msa0043980	Msa0693600	0.804472	2.124708e-49	-8.615850e-47
Msa0068680	Msa0693600	0.801960	7.035602e-49	-8.615850e-47
Msa0074200	Msa0693600	0.805635	1.213913e-49	-8.615850e-47
Msa0074700	Msa0693600	0.819690	1.017619e-52	-8.615850e-47
Msa0077610	Msa0693600	0.801596	8.358069e-49	-8.615850e-47
Msa0095560	Msa0693600	0.801775	7.679462e-49	-8.615850e-47
Msa0096450	Msa0693600	0.826333	2.872932e-54	-8.615850e-47
Msa0112750	Msa0693600	0.804045	2.608024e-49	-8.615850e-47
Msa0113750	Msa0693600	0.800858	1.183495e-48	-8.615850e-47
Msa0610430	Msa0693600	0.801124	1.044208e-48	-8.615850e-47
Msa0612960	Msa0693600	0.801524	8.644678e-49	-8.615850e-47
Msa0626090	Msa0693600	0.800338	1.510153e-48	-8.615850e-47
Msa0638070	Msa0693600	0.808661	2.776064e-50	-8.615850e-47
Msa0647980	Msa0693600	0.807764	4.310141e-50	-8.615850e-47
Msa0657970	Msa0693600	0.834694	2.585165e-56	-8.615850e-47
Msa0673460	Msa0693600	0.810904	9.140541e-51	-8.615850e-47
Msa0688070	Msa0693600	0.827930	1.191687e-54	-8.615850e-47
Msa0693380	Msa0693600	0.805903	1.066004e-49	-8.615850e-47
Msa0693600	Msa0696640	0.819676	1.024700e-52	-8.615850e-47
Msa0693600	Msa0708860	0.800101	1.687838e-48	-8.615850e-47
Msa0693600	Msa0736860	0.824129	9.541288e-54	-8.615850e-47
Msa0693600	Msa0740510	0.812736	3.648099e-51	-8.615850e-47
Msa0693600	Msa0742380	0.800995	1.109246e-48	-8.615850e-47
Msa0693600	Msa0749930	0.807367	5.234049e-50	-8.615850e-47
Msa0693600	Msa0771720	0.803206	3.893701e-49	-8.615850e-47
Msa0693600	Msa0778520	0.807623	4.616684e-50	-8.615850e-47
Msa0693600	Msa0790510	0.833165	6.236895e-56	-8.615850e-47
Msa0693600	Msa0795680	0.803458	3.452222e-49	-8.615850e-47
Msa0693600	Msa0820770	0.815619	8.425222e-52	-8.615850e-47
Msa0693600	Msa0825080	0.805786	1.128453e-49	-8.615850e-47
Msa0693600	Msa0830420	0.813884	2.042205e-51	-8.615850e-47
Msa0693600	Msa0861090	0.804856	1.767024e-49	-8.615850e-47
Msa0693600	Msa0869100	0.815271	1.006802e-51	-8.615850e-47
Msa0693600	Msa0874980	0.800269	1.560365e-48	-8.615850e-47
Msa0693600	Msa0885280	0.800674	1.289920e-48	-8.615850e-47
Msa0693600	Msa0895120	0.800096	1.691774e-48	-8.615850e-47
Msa0693600	Msa0933230	0.810070	1.383989e-50	-8.615850e-47
Msa0693600	Msa0933310	0.818174	2.249160e-52	-8.615850e-47
Msa0693600	Msa0969520	0.820074	8.309397e-53	-8.615850e-47
Msa0693600	Msa0971090	0.809903	1.502916e-50	-8.615850e-47
Msa0693600	Msa1002480	0.800417	1.455204e-48	-8.615850e-47
Msa0693600	Msa1015790	0.810804	9.608771e-51	-8.615850e-47
Msa0693600	Msa1023920	0.813864	2.062881e-51	-8.615850e-47
Msa0693600	Msa1034150	0.800403	1.464910e-48	-8.615850e-47
Msa0693600	Msa1044420	0.833299	5.777145e-56	-8.615850e-47
Msa0693600	Msa1045200	0.809247	2.079516e-50	-8.615850e-47
Msa0693600	Msa1059570	0.800537	1.375556e-48	-8.615850e-47
Msa0693600	Msa1075220	-0.810984	8.781891e-51	-8.615850e-47
Msa0693600	Msa1082500	0.847376	1.202697e-59	-8.615850e-47
Msa0693600	Msa1107900	0.814532	1.468640e-51	-8.615850e-47
Msa0693600	Msa1116130	-0.816736	4.742757e-52	-8.615850e-47
Msa0693600	Msa1131220	0.824739	6.857608e-54	-8.615850e-47
Msa0693600	Msa1143270	0.808933	2.427808e-50	-8.615850e-47
Msa0693600	Msa1162550	-0.806873	6.658745e-50	-8.615850e-47
Msa0693600	Msa1170280	0.802512	5.416059e-49	-8.615850e-47
Msa0693600	Msa1174040	0.802624	5.136085e-49	-8.615850e-47
Msa0693600	Msa1224480	0.823109	1.653328e-53	-8.615850e-47
Msa0693600	Msa1233500	0.800808	1.211311e-48	-8.615850e-47
Msa0693600	Msa1233890	0.808041	3.763840e-50	-8.615850e-47
Msa0693600	Msa1250890	0.815230	1.028210e-51	-8.615850e-47
Msa0693600	Msa1267960	0.804993	1.654210e-49	-8.615850e-47
Msa0693600	Msa1279210	0.807783	4.270472e-50	-8.615850e-47
Msa0693600	Msa1283860	0.801170	1.021656e-48	-8.615850e-47
Msa0693600	Msa1305340	0.823957	1.046808e-53	-8.615850e-47
Msa0693600	Msa1314340	0.816428	5.557711e-52	-8.615850e-47
Msa0693600	Msa1327550	0.811582	6.513582e-51	-8.615850e-47
Msa0693600	Msa1327680	0.806933	6.466349e-50	-8.615850e-47
Msa0693600	Msa1328700	0.800427	1.448559e-48	-8.615850e-47
Msa0693600	Msa1329700	0.806882	6.627256e-50	-8.615850e-47
Msa0693600	Msa1340650	0.836821	7.473373e-57	-8.615850e-47
Msa0693600	Msa1359040	0.821941	3.088796e-53	-8.615850e-47
Msa0693600	Msa1372760	0.803746	3.009593e-49	-8.615850e-47
Msa0693600	Msa1384350	0.809514	1.822605e-50	-8.615850e-47
Msa0693600	Msa1392260	0.841545	4.451795e-58	-8.615850e-47
Msa0693600	Msa1411020	0.808569	2.903316e-50	-8.615850e-47
Msa0693600	Msa1424290	0.809148	2.183198e-50	-8.615850e-47
Msa0693600	Msa1425100	0.800327	1.518419e-48	-8.615850e-47
Msa0693600	Msa1429900	0.837920	3.910431e-57	-8.615850e-47
Msa0693600	Msa1434350	0.806773	6.989146e-50	-8.615850e-47
Msa0693600	Msa1437680	0.800380	1.480777e-48	-8.615850e-47
Msa0693600	Msa1439320	0.807406	5.135361e-50	-8.615850e-47
Msa0693600	Msa1449820	0.803810	2.918906e-49	-8.615850e-47
Msa0693600	Msa1452240	0.826017	3.416724e-54	-8.615850e-47
Msa0693600	Msa1454120	0.802790	4.747283e-49	-8.615850e-47
Msa0693600	Msa1454860	0.811029	8.588175e-51	-8.615850e-47
Msa0693600	Msa1464940	0.808174	3.525143e-50	-8.615850e-47
Msa0122590	Msa0693600	0.826337	2.866992e-54	-8.615850e-47
Msa0140780	Msa0693600	0.809007	2.340450e-50	-8.615850e-47
Msa0157290	Msa0693600	0.800999	1.107031e-48	-8.615850e-47
Msa0159930	Msa0693600	0.801213	1.000957e-48	-8.615850e-47
Msa0166870	Msa0693600	0.840482	8.469177e-58	-8.615850e-47
Msa0188830	Msa0693600	0.840529	8.231561e-58	-8.615850e-47
Msa0200260	Msa0693600	0.801439	8.998127e-49	-8.615850e-47
Msa0205510	Msa0693600	0.815978	7.006832e-52	-8.615850e-47
Msa0210450	Msa0693600	0.811587	6.496880e-51	-8.615850e-47
Msa0220580	Msa0693600	0.831026	2.107331e-55	-8.615850e-47
Msa0379640	Msa0693600	0.815903	7.282357e-52	-8.615850e-47
Msa0389340	Msa0693600	0.814575	1.436806e-51	-8.615850e-47
Msa0433360	Msa0693600	0.814274	1.674969e-51	-8.615850e-47
Msa0440750	Msa0693600	0.801419	9.084481e-49	-8.615850e-47
Msa0469990	Msa0693600	0.809092	2.244404e-50	-8.615850e-47
Msa0477080	Msa0693600	0.816946	4.254293e-52	-8.615850e-47
Msa0477130	Msa0693600	-0.801275	9.723787e-49	-8.615850e-47
Msa0479970	Msa0693600	0.804248	2.366709e-49	-8.615850e-47
Msa0242430	Msa0693600	0.806497	7.992146e-50	-8.615850e-47
Msa0243100	Msa0693600	0.810882	9.242316e-51	-8.615850e-47
Msa0243710	Msa0693600	0.828985	6.629652e-55	-8.615850e-47
Msa0258760	Msa0693600	0.806287	8.850845e-50	-8.615850e-47
Msa0270100	Msa0693600	0.833447	5.306536e-56	-8.615850e-47
Msa0282250	Msa0693600	0.832891	7.299166e-56	-8.615850e-47
Msa0287410	Msa0693600	0.807598	4.674726e-50	-8.615850e-47
Msa0287650	Msa0693600	0.829466	5.067379e-55	-8.615850e-47
Msa0288100	Msa0693600	0.801439	8.997875e-49	-8.615850e-47
Msa0315290	Msa0693600	0.802318	5.939023e-49	-8.615850e-47
Msa0345970	Msa0693600	0.803759	2.990624e-49	-8.615850e-47
Msa0484780	Msa0693600	0.836958	6.897586e-57	-8.615850e-47
Msa0493630	Msa0693600	0.828867	7.082092e-55	-8.615850e-47
Msa0502100	Msa0693600	0.809238	2.088571e-50	-8.615850e-47
Msa0507680	Msa0693600	0.804078	2.567638e-49	-8.615850e-47
Msa0512900	Msa0693600	0.801961	7.033466e-49	-8.615850e-47
Msa0515010	Msa0693600	0.803217	3.874135e-49	-8.615850e-47
Msa0516440	Msa0693600	0.801229	9.936177e-49	-8.615850e-47
Msa0523460	Msa0693600	0.821608	3.687577e-53	-8.615850e-47
Msa0532350	Msa0693600	0.801967	7.013666e-49	-8.615850e-47
Msa0536220	Msa0693600	0.824532	7.668932e-54	-8.615850e-47
Msa0565730	Msa0693600	0.800735	1.253632e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0693600	MtrunA17_Chr4g0043981	91.447	152	1	1	58	209	811	950	1.11e-85	271
Msa0693600	MtrunA17_Chr4g0054721	77.966	59	12	1	1	58	103	161	1.68e-15	74.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0693600	AT2G01460.3	67.763	152	38	1	58	209	809	949	1.62e-56	192
Msa0693600	AT2G01460.2	65.035	143	39	1	67	209	823	954	1.12e-49	173
Msa0693600	AT2G01460.1	65.035	143	39	1	67	209	824	955	1.26e-49	173

Find 66 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCAGGTTCAATGCTTAAAT+TGG	0.289201	4_4:-62551227	Msa0693600:CDS
GTGACTTTCGTTAGCTTGTA+TGG	0.327585	4_4:+62549084	None:intergenic
CAGAAATAACTTGTTGGAAC+AGG	0.333894	4_4:-62549484	Msa0693600:CDS
GAGTTACCTTGAAATAGTTT+TGG	0.348507	4_4:-62551068	Msa0693600:CDS
TTTCTAATGTCAGCTATTGT+TGG	0.356891	4_4:-62549223	Msa0693600:CDS
CGTGAAATACCTTCGTATAC+AGG	0.360415	4_4:-62549130	Msa0693600:three_prime_UTR
CCAGAACTTCTCTCTATTGT+TGG	0.371869	4_4:+62551037	None:intergenic
TGGTCCATACATTCAGATAA+AGG	0.373959	4_4:-62551275	Msa0693600:CDS
ATTCTTTAGGCATTATCATT+TGG	0.380091	4_4:-62549507	Msa0693600:intron
CAAATTATTTACACATGGAT+TGG	0.421980	4_4:+62549003	None:intergenic
GATAAGATGTTTCAAACCTT+CGG	0.422252	4_4:-62551910	None:intergenic
ACACCCTTTATCTGAATGTA+TGG	0.430907	4_4:+62551271	None:intergenic
CCAACAATAGAGAGAAGTTC+TGG	0.434593	4_4:-62551037	Msa0693600:CDS
TATTCAAAGAGCTTCTGAAT+TGG	0.437272	4_4:-62551881	Msa0693600:CDS
AGATGCAATCAAAGATTAGA+AGG	0.448571	4_4:-62549395	Msa0693600:CDS
GTCTTTCCAAAACTATTTCA+AGG	0.448794	4_4:+62551062	None:intergenic
TTTGATGGGGCCAATGGCCA+TGG	0.450044	4_4:-62548965	Msa0693600:three_prime_UTR
ATTTGGCAGAAATAACTTGT+TGG	0.452320	4_4:-62549490	Msa0693600:CDS
GGAAAGTGGGCCATGGCCAT+TGG	0.455383	4_4:+62548955	None:intergenic
TTATTGAGTCTAGGTTCAAC+CGG	0.458903	4_4:-62549057	Msa0693600:three_prime_UTR
AAAGATGCTGTGGCAGCAGC+AGG	0.464316	4_4:-62551244	Msa0693600:CDS
GGTCCATACATTCAGATAAA+GGG	0.464388	4_4:-62551274	Msa0693600:CDS
AAAATTTGTATTGCGGAAAG+TGG	0.472802	4_4:+62548941	None:intergenic
AACCACATCTTCATATAAAG+TGG	0.476417	4_4:+62551825	None:intergenic
TATCTTTGAAATCGACGAAC+CGG	0.480134	4_4:+62549038	None:intergenic
AGGGTAGTCTCTCCGATTGA+AGG	0.489687	4_4:-62549429	Msa0693600:CDS
TCCTCAATAATGCCTTCAAT+CGG	0.491697	4_4:+62549417	None:intergenic
GCTTGTGTAGATTCTAATTG+AGG	0.498265	4_4:-62551320	Msa0693600:intron
CTTCGGAATCCTCATCAAGT+AGG	0.498420	4_4:-62549449	Msa0693600:CDS
ACAGGGATGTAGCTCTTCTT+CGG	0.502993	4_4:-62549466	Msa0693600:CDS
CAAAGATTAGAAGGCTTGAA+AGG	0.512203	4_4:-62549386	Msa0693600:CDS
AGATGTGGTTACCTATGAAA+AGG	0.516205	4_4:-62551812	Msa0693600:CDS
TTGGTTATTCACTTTATCAA+AGG	0.516765	4_4:-62549204	Msa0693600:CDS
AACAAGGCTGCTAGAGATTG+TGG	0.517429	4_4:-62550993	Msa0693600:CDS
ATCAAAGGAGGCGTCAATGA+TGG	0.518769	4_4:-62549189	Msa0693600:exon
GGATGGTTCATATACTACTA+AGG	0.520676	4_4:-62551206	Msa0693600:intron
GGTTCAATGCTTAAATTGGA+TGG	0.524456	4_4:-62551223	Msa0693600:CDS
TACCTATGAAAAGGAGGAAG+AGG	0.525294	4_4:-62551803	Msa0693600:CDS
TCCGATTGAAGGCATTATTG+AGG	0.534013	4_4:-62549418	Msa0693600:CDS
CTGAATTGGTTCTCCTGATG+AGG	0.537297	4_4:-62551867	Msa0693600:CDS
GTGAAATACCTTCGTATACA+GGG	0.539974	4_4:-62549129	Msa0693600:three_prime_UTR
GTTATTCACTTTATCAAAGG+AGG	0.540889	4_4:-62549201	Msa0693600:CDS
GTCACTAATTTATTGAGTCT+AGG	0.551580	4_4:-62549066	Msa0693600:three_prime_UTR
AAGGTGGCTTGCTATAAATA+CGG	0.554058	4_4:-62549367	Msa0693600:intron
TTCGGAATCCTCATCAAGTA+GGG	0.560861	4_4:-62549448	Msa0693600:CDS
CCCCACTTTATATGAAGATG+TGG	0.564790	4_4:-62551827	Msa0693600:CDS
TTATTTGAAAATTTGTATTG+CGG	0.568864	4_4:+62548934	None:intergenic
ACCACATCTTCATATAAAGT+GGG	0.570622	4_4:+62551826	None:intergenic
AGAAATAACTTGTTGGAACA+GGG	0.575591	4_4:-62549483	Msa0693600:CDS
TTTATCTGAATGTATGGACC+AGG	0.592395	4_4:+62551277	None:intergenic
ATGTGGTTTGATGGGGCCAA+TGG	0.594067	4_4:-62548971	Msa0693600:three_prime_UTR
AAATTTGTATTGCGGAAAGT+GGG	0.595122	4_4:+62548942	None:intergenic
TCTTTGAATAAGATCACCGA+AGG	0.605643	4_4:+62551894	None:intergenic
GTCATCAAATTATTTACACA+TGG	0.611092	4_4:+62548998	None:intergenic
TGTGGTTACCTATGAAAAGG+AGG	0.617536	4_4:-62551809	Msa0693600:CDS
AGATTAGAAGGCTTGAAAGG+TGG	0.620390	4_4:-62549383	Msa0693600:CDS
GTATTGCGGAAAGTGGGCCA+TGG	0.624056	4_4:+62548948	None:intergenic
GATCATCTACAAGATGTCCC+TGG	0.627381	4_4:-62551295	Msa0693600:CDS
GGGTGTTTCTAAAGATGCTG+TGG	0.631886	4_4:-62551254	Msa0693600:CDS
AGAGACTACCCTACTTGATG+AGG	0.641184	4_4:+62549440	None:intergenic
ACAATAGAGAGAAGTTCTGG+TGG	0.645519	4_4:-62551034	Msa0693600:CDS
CCACATCTTCATATAAAGTG+GGG	0.650747	4_4:+62551827	None:intergenic
CGATTTCAAAGATAAACTGA+AGG	0.651964	4_4:-62549029	Msa0693600:three_prime_UTR
CAATAGAGAGAAGTTCTGGT+GGG	0.659977	4_4:-62551033	Msa0693600:CDS
AACTCGAGCCCTGTATACGA+AGG	0.673433	4_4:+62549121	None:intergenic
TTATCTGAATGTATGGACCA+GGG	0.690793	4_4:+62551278	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTATGGTAATTTTTTTT+TGG	-	chr4_4:62550367-62550386	Msa0693600:intron	10.0%
!!!	ATTTATGGTAATTTTTTTTT+GGG	-	chr4_4:62550368-62550387	Msa0693600:intron	10.0%
!!!	GGTAAAAAATATTTTTTTTT+GGG	-	chr4_4:62550530-62550549	Msa0693600:intron	10.0%
!!!	GTAAAAAATATTTTTTTTTG+GGG	-	chr4_4:62550531-62550550	Msa0693600:intron	10.0%
!!!	AAAAATGTTTATAGAAATTT+TGG	-	chr4_4:62550570-62550589	Msa0693600:intron	10.0%
!!!	AAAATGTTTATAGAAATTTT+GGG	-	chr4_4:62550571-62550590	Msa0693600:intron	10.0%
!!!	TTTTTGATTTTTTTATTTGT+GGG	-	chr4_4:62550604-62550623	Msa0693600:intron	10.0%
!!!	ATTTTGTTTATTTGATATTT+TGG	-	chr4_4:62551412-62551431	Msa0693600:intron	10.0%
!!!	TTAGTTTCAATAATTTTACT+TGG	-	chr4_4:62548966-62548985	Msa0693600:three_prime_UTR	15.0%
!!	AAAATTTAGTCTATTTATGT+AGG	-	chr4_4:62549742-62549761	Msa0693600:intron	15.0%
!!	TCTAGTATTAGTATAAATAA+GGG	+	chr4_4:62549935-62549954	None:intergenic	15.0%
!!!	AAATAATTTTGTTCAATTAG+GGG	+	chr4_4:62550235-62550254	None:intergenic	15.0%
!!!	CAAATAATTTTGTTCAATTA+GGG	+	chr4_4:62550236-62550255	None:intergenic	15.0%
!!	CTAATTGAACAAAATTATTT+GGG	-	chr4_4:62550235-62550254	Msa0693600:intron	15.0%
!!	TAATTGAACAAAATTATTTG+GGG	-	chr4_4:62550236-62550255	Msa0693600:intron	15.0%
!!!	AAATAAGTTGATTTTATAGT+GGG	+	chr4_4:62550267-62550286	None:intergenic	15.0%
!!	TATAAAATCAACTTATTTGT+GGG	-	chr4_4:62550269-62550288	Msa0693600:intron	15.0%
!!	GGGTAAAAAAAAAAAATTTA+TGG	-	chr4_4:62550353-62550372	Msa0693600:intron	15.0%
!!!	TTTATGGTAATTTTTTTTTG+GGG	-	chr4_4:62550369-62550388	Msa0693600:intron	15.0%
!!!	GGGTAAATATTTTTTTTTTA+CGG	-	chr4_4:62550420-62550439	Msa0693600:intron	15.0%
!!	GGGTAAAAAAAAAAAAATTA+CGG	-	chr4_4:62550493-62550512	Msa0693600:intron	15.0%
!!!	ATTACGGTAAAAAAAATTTT+CGG	-	chr4_4:62550509-62550528	Msa0693600:intron	15.0%
!!!	CGGTAAAAAATATTTTTTTT+TGG	-	chr4_4:62550529-62550548	Msa0693600:intron	15.0%
!!!	AAATGTTTATAGAAATTTTG+GGG	-	chr4_4:62550572-62550591	Msa0693600:intron	15.0%
!!!	CTTTTTGATTTTTTTATTTG+TGG	-	chr4_4:62550603-62550622	Msa0693600:intron	15.0%
!!	TGAAAATATAGATTTAGATA+AGG	-	chr4_4:62550744-62550763	Msa0693600:intron	15.0%
!!	GAAAATATAGATTTAGATAA+GGG	-	chr4_4:62550745-62550764	Msa0693600:intron	15.0%
!!	TTATTTGAAAATTTGTATTG+CGG	+	chr4_4:62551743-62551762	None:intergenic	15.0%
!!	AGTTTGAATTATATATCTCA+TGG	-	chr4_4:62549004-62549023	Msa0693600:three_prime_UTR	20.0%
!!	ATAGTATTAATAAACTTGGT+TGG	+	chr4_4:62549056-62549075	None:intergenic	20.0%
!!	CATGATAGTATTAATAAACT+TGG	+	chr4_4:62549060-62549079	None:intergenic	20.0%
!!	CAAGTTTATTAATACTATCA+TGG	-	chr4_4:62549058-62549077	Msa0693600:three_prime_UTR	20.0%
!!	TATTAATACTATCATGGATT+TGG	-	chr4_4:62549064-62549083	Msa0693600:three_prime_UTR	20.0%
!!!	TTATTTCTATAATCACTACA+CGG	-	chr4_4:62549170-62549189	Msa0693600:three_prime_UTR	20.0%
!!	AAATGGATAATATTTGATGA+AGG	+	chr4_4:62549768-62549787	None:intergenic	20.0%
!!	CAGTTAAGTACTTATATAAA+TGG	+	chr4_4:62549785-62549804	None:intergenic	20.0%
!!	GTCTAGTATTAGTATAAATA+AGG	+	chr4_4:62549936-62549955	None:intergenic	20.0%
!!	ATTTATACTAATACTAGACT+CGG	-	chr4_4:62549937-62549956	Msa0693600:intron	20.0%
!!!	CCAAATAATTTTGTTCAATT+AGG	+	chr4_4:62550237-62550256	None:intergenic	20.0%
!!	CCTAATTGAACAAAATTATT+TGG	-	chr4_4:62550234-62550253	Msa0693600:intron	20.0%
!!!	CAAATAAGTTGATTTTATAG+TGG	+	chr4_4:62550268-62550287	None:intergenic	20.0%
!!	CTATAAAATCAACTTATTTG+TGG	-	chr4_4:62550268-62550287	Msa0693600:intron	20.0%
!!	TACCCAAAAAAAATTAATGT+GGG	+	chr4_4:62550306-62550325	None:intergenic	20.0%
!!	TTACCCAAAAAAAATTAATG+TGG	+	chr4_4:62550307-62550326	None:intergenic	20.0%
!!!	TTTTTTGGGTAAAAAAATTC+CGG	-	chr4_4:62550315-62550334	Msa0693600:intron	20.0%
!!	TGAAAATTCACAAAACAAAA+AGG	+	chr4_4:62550646-62550665	None:intergenic	20.0%
!!!	TCTAAATCTATATTTTCACA+GGG	+	chr4_4:62550742-62550761	None:intergenic	20.0%
!!!	ATCTAAATCTATATTTTCAC+AGG	+	chr4_4:62550743-62550762	None:intergenic	20.0%
!!!	AGTTTTTTTAACAGAGTTAA+TGG	+	chr4_4:62550853-62550872	None:intergenic	20.0%
!!	TGGCTTCATTATTATATTTA+AGG	+	chr4_4:62550947-62550966	None:intergenic	20.0%
!!	AAGATAATTCAACATCATAA+GGG	-	chr4_4:62550966-62550985	Msa0693600:intron	20.0%
!!!	ATAATTTGATGACAAAAATG+TGG	-	chr4_4:62551686-62551705	Msa0693600:intron	20.0%
!	AAACTAACCTGTTAACAAAA+CGG	+	chr4_4:62548953-62548972	None:intergenic	25.0%
!	ATATCTCATGGTTATACTTT+CGG	-	chr4_4:62549016-62549035	Msa0693600:three_prime_UTR	25.0%
!	AAAATAGCGTATAGCTTATA+TGG	-	chr4_4:62549202-62549221	Msa0693600:CDS	25.0%
!	TTCATATACTACTAAGGTAT+TGG	-	chr4_4:62549474-62549493	Msa0693600:CDS	25.0%
!!	TTAGTATTCTTGTCTGTTTT+TGG	-	chr4_4:62549581-62549600	Msa0693600:intron	25.0%
!!	TTAATTTTCAGCAATCAACA+AGG	-	chr4_4:62549665-62549684	Msa0693600:intron	25.0%
!!!	AATTTTTTCCAACGAGTAAT+GGG	+	chr4_4:62549728-62549747	None:intergenic	25.0%
!!!	AAATTTTTTCCAACGAGTAA+TGG	+	chr4_4:62549729-62549748	None:intergenic	25.0%
!	TACTTAACTGTGTTTACAAA+AGG	-	chr4_4:62549795-62549814	Msa0693600:intron	25.0%
!	AGAGATAATCACCAAAAAAA+AGG	-	chr4_4:62549824-62549843	Msa0693600:intron	25.0%
!!!	GAAAAGTATTCCTAAACTAT+TGG	-	chr4_4:62550007-62550026	Msa0693600:intron	25.0%
!	ATTAGATCTTCCAATAGTTT+AGG	+	chr4_4:62550020-62550039	None:intergenic	25.0%
!!!	AATTAATGTGGGCTTTTTTT+AGG	+	chr4_4:62550295-62550314	None:intergenic	25.0%
!!!	AAGCCCACATTAATTTTTTT+TGG	-	chr4_4:62550300-62550319	Msa0693600:intron	25.0%
!!!	AGCCCACATTAATTTTTTTT+GGG	-	chr4_4:62550301-62550320	Msa0693600:intron	25.0%
!!!	ATTCCGGTAAATTTTTTTTC+TGG	-	chr4_4:62550331-62550350	Msa0693600:intron	25.0%
!!!	TTCCGGTAAATTTTTTTTCT+GGG	-	chr4_4:62550332-62550351	Msa0693600:intron	25.0%
!!!	TTTTTTGGGGTAAAAAATTC+CGG	-	chr4_4:62550382-62550401	Msa0693600:intron	25.0%
!!!	TTTTTGGGGTAAAAAAATTC+CGG	-	chr4_4:62550455-62550474	Msa0693600:intron	25.0%
!!!	ATTCCGGTAAATTTTTTTTC+TGG	-	chr4_4:62550331-62550350	Msa0693600:intron	25.0%
!!!	TTCCGGTAAATTTTTTTTCT+GGG	-	chr4_4:62550332-62550351	Msa0693600:intron	25.0%
!	AATATAGATTTAGATAAGGG+AGG	-	chr4_4:62550748-62550767	Msa0693600:intron	25.0%
!!!	TTTTTTAACAGAGTTAATGG+AGG	+	chr4_4:62550850-62550869	None:intergenic	25.0%
!	CTTATGATGTTGAATTATCT+TGG	+	chr4_4:62550967-62550986	None:intergenic	25.0%
!	CAAGATAATTCAACATCATA+AGG	-	chr4_4:62550965-62550984	Msa0693600:intron	25.0%
!	ACAAATACAAGGAAAACAAA+TGG	+	chr4_4:62551132-62551151	None:intergenic	25.0%
!	ATTCTTTAGGCATTATCATT+TGG	-	chr4_4:62551167-62551186	Msa0693600:intron	25.0%
!	TTGGTTATTCACTTTATCAA+AGG	-	chr4_4:62551470-62551489	Msa0693600:intron	25.0%
!	CAAATTATTTACACATGGAT+TGG	+	chr4_4:62551674-62551693	None:intergenic	25.0%
!	GTCATCAAATTATTTACACA+TGG	+	chr4_4:62551679-62551698	None:intergenic	25.0%
	TATTCAAAGAGCTTCTGAAT+TGG	-	chr4_4:62548793-62548812	Msa0693600:three_prime_UTR	30.0%
!	TTTTTCTTTGTATCCTCATC+AGG	+	chr4_4:62548823-62548842	None:intergenic	30.0%
	ACCACATCTTCATATAAAGT+GGG	+	chr4_4:62548851-62548870	None:intergenic	30.0%
	AACCACATCTTCATATAAAG+TGG	+	chr4_4:62548852-62548871	None:intergenic	30.0%
!	TCAAAATCATCACTCTTTTG+TGG	+	chr4_4:62548902-62548921	None:intergenic	30.0%
!	CAAAAGAGTGATGATTTTGA+AGG	-	chr4_4:62548902-62548921	Msa0693600:three_prime_UTR	30.0%
!!	TGATGATTTTGAAGGTGAAA+AGG	-	chr4_4:62548910-62548929	Msa0693600:three_prime_UTR	30.0%
!!	GATGATTTTGAAGGTGAAAA+GGG	-	chr4_4:62548911-62548930	Msa0693600:three_prime_UTR	30.0%
!	ATACTATCATGGATTTGGTT+AGG	-	chr4_4:62549069-62549088	Msa0693600:three_prime_UTR	30.0%
	AATCTACACAAGCAAAATCA+GGG	+	chr4_4:62549347-62549366	None:intergenic	30.0%
!	GAGTTACCTTGAAATAGTTT+TGG	-	chr4_4:62549606-62549625	Msa0693600:intron	30.0%
	GTCTTTCCAAAACTATTTCA+AGG	+	chr4_4:62549615-62549634	None:intergenic	30.0%
!	TGTGGATTTTATTCAATCTC+AGG	-	chr4_4:62549699-62549718	Msa0693600:intron	30.0%
!!!	ATTTTTTCCAACGAGTAATG+GGG	+	chr4_4:62549727-62549746	None:intergenic	30.0%
	TTAACTGTGTTTACAAAAGG+AGG	-	chr4_4:62549798-62549817	Msa0693600:intron	30.0%
	GATAATCACCAAAAAAAAGG+AGG	-	chr4_4:62549827-62549846	Msa0693600:intron	30.0%
	CTATAAATTCCATGTTCTGA+GGG	+	chr4_4:62550077-62550096	None:intergenic	30.0%
!	ATTAGGGGCTTTAATTTAGT+GGG	+	chr4_4:62550220-62550239	None:intergenic	30.0%
!	AATTAGGGGCTTTAATTTAG+TGG	+	chr4_4:62550221-62550240	None:intergenic	30.0%
!!!	TCCGGTAAATTTTTTTTCTG+GGG	-	chr4_4:62550333-62550352	Msa0693600:intron	30.0%
	ACCCCAGAAAAAAAATTTAC+CGG	+	chr4_4:62550337-62550356	None:intergenic	30.0%
!!!	ATTCCGGTAAATTTTTTCTC+TGG	-	chr4_4:62550398-62550417	Msa0693600:intron	30.0%
!!!	TTCCGGTAAATTTTTTCTCT+GGG	-	chr4_4:62550399-62550418	Msa0693600:intron	30.0%
!!!	ACGGTACAAAACGTTTTTTT+TGG	-	chr4_4:62550439-62550458	Msa0693600:intron	30.0%
!!!	CGGTACAAAACGTTTTTTTT+GGG	-	chr4_4:62550440-62550459	Msa0693600:intron	30.0%
!!!	GGTACAAAACGTTTTTTTTG+GGG	-	chr4_4:62550441-62550460	Msa0693600:intron	30.0%
!!!	TCCGGTAAATTTTTTTTCTG+GGG	-	chr4_4:62550333-62550352	Msa0693600:intron	30.0%
	ACCCCAGAAAAAAAATTTAC+CGG	+	chr4_4:62550337-62550356	None:intergenic	30.0%
!!!	TTTATAGAAATTTTGGGGCT+TGG	-	chr4_4:62550577-62550596	Msa0693600:intron	30.0%
!!!	TTATAGAAATTTTGGGGCTT+GGG	-	chr4_4:62550578-62550597	Msa0693600:intron	30.0%
!!	GTACTAAAGAAAGTACTCTT+TGG	-	chr4_4:62550805-62550824	Msa0693600:intron	30.0%
	AATCGGGTCATATTATTAAG+AGG	+	chr4_4:62551007-62551026	None:intergenic	30.0%
	AGCATTCACTATCATTCTTT+AGG	-	chr4_4:62551154-62551173	Msa0693600:intron	30.0%
!	ATTTGGCAGAAATAACTTGT+TGG	-	chr4_4:62551184-62551203	Msa0693600:intron	30.0%
!!	AGAAATAACTTGTTGGAACA+GGG	-	chr4_4:62551191-62551210	Msa0693600:intron	30.0%
	AGATGCAATCAAAGATTAGA+AGG	-	chr4_4:62551279-62551298	Msa0693600:CDS	30.0%
!!!	GTTTATTTGATATTTTGGCC+AGG	-	chr4_4:62551417-62551436	Msa0693600:intron	30.0%
	TTTCTAATGTCAGCTATTGT+TGG	-	chr4_4:62551451-62551470	Msa0693600:intron	30.0%
	GTTATTCACTTTATCAAAGG+AGG	-	chr4_4:62551473-62551492	Msa0693600:intron	30.0%
	GTCACTAATTTATTGAGTCT+AGG	-	chr4_4:62551608-62551627	Msa0693600:intron	30.0%
	CGATTTCAAAGATAAACTGA+AGG	-	chr4_4:62551645-62551664	Msa0693600:intron	30.0%
	ATGACAAAAATGTGGTTTGA+TGG	-	chr4_4:62551694-62551713	Msa0693600:intron	30.0%
	TGACAAAAATGTGGTTTGAT+GGG	-	chr4_4:62551695-62551714	Msa0693600:intron	30.0%
	AAATTTGTATTGCGGAAAGT+GGG	+	chr4_4:62551735-62551754	None:intergenic	30.0%
	AAAATTTGTATTGCGGAAAG+TGG	+	chr4_4:62551736-62551755	None:intergenic	30.0%
	TCTTTGAATAAGATCACCGA+AGG	+	chr4_4:62548783-62548802	None:intergenic	35.0%
	CCACATCTTCATATAAAGTG+GGG	+	chr4_4:62548850-62548869	None:intergenic	35.0%
	AGATGTGGTTACCTATGAAA+AGG	-	chr4_4:62548862-62548881	Msa0693600:three_prime_UTR	35.0%
	ATCTACACAAGCAAAATCAG+GGG	+	chr4_4:62549346-62549365	None:intergenic	35.0%
	GAATCTACACAAGCAAAATC+AGG	+	chr4_4:62549348-62549367	None:intergenic	35.0%
	GCTTGTGTAGATTCTAATTG+AGG	-	chr4_4:62549354-62549373	Msa0693600:intron	35.0%
	TTATCTGAATGTATGGACCA+GGG	+	chr4_4:62549399-62549418	None:intergenic	35.0%
	TTTATCTGAATGTATGGACC+AGG	+	chr4_4:62549400-62549419	None:intergenic	35.0%
	TGGTCCATACATTCAGATAA+AGG	-	chr4_4:62549399-62549418	Msa0693600:CDS	35.0%
	GGTCCATACATTCAGATAAA+GGG	-	chr4_4:62549400-62549419	Msa0693600:CDS	35.0%
	ACACCCTTTATCTGAATGTA+TGG	+	chr4_4:62549406-62549425	None:intergenic	35.0%
	AGCAGGTTCAATGCTTAAAT+TGG	-	chr4_4:62549447-62549466	Msa0693600:CDS	35.0%
	GGTTCAATGCTTAAATTGGA+TGG	-	chr4_4:62549451-62549470	Msa0693600:CDS	35.0%
	GGATGGTTCATATACTACTA+AGG	-	chr4_4:62549468-62549487	Msa0693600:CDS	35.0%
!	TTTTAGTCCCTTTCTTTCTC+TGG	-	chr4_4:62549510-62549529	Msa0693600:intron	35.0%
!!!	TCTTGTTGCCTCCTTTTTTT+TGG	+	chr4_4:62549838-62549857	None:intergenic	35.0%
	CCTATAAATTCCATGTTCTG+AGG	+	chr4_4:62550078-62550097	None:intergenic	35.0%
	CCTCAGAACATGGAATTTAT+AGG	-	chr4_4:62550075-62550094	Msa0693600:intron	35.0%
!!	TCAAGTGGGCTTTGAAATTT+GGG	+	chr4_4:62550181-62550200	None:intergenic	35.0%
!!	TTCAAGTGGGCTTTGAAATT+TGG	+	chr4_4:62550182-62550201	None:intergenic	35.0%
!!	TTTAATTTAGTGGGCTTGGT+GGG	+	chr4_4:62550211-62550230	None:intergenic	35.0%
!!!	AGTTGATTTTATAGTGGGCT+TGG	+	chr4_4:62550262-62550281	None:intergenic	35.0%
!!!	TCCGGTAAATTTTTTCTCTG+GGG	-	chr4_4:62550400-62550419	Msa0693600:intron	35.0%
	ACCCCAGAGAAAAAATTTAC+CGG	+	chr4_4:62550404-62550423	None:intergenic	35.0%
!!!	TATAGAAATTTTGGGGCTTG+GGG	-	chr4_4:62550579-62550598	Msa0693600:intron	35.0%
	AAAACTGTTAGATGCTGACA+TGG	-	chr4_4:62550867-62550886	Msa0693600:intron	35.0%
!	AGTGAAGTTTAGGATCAATC+GGG	+	chr4_4:62551023-62551042	None:intergenic	35.0%
!	GAGTGAAGTTTAGGATCAAT+CGG	+	chr4_4:62551024-62551043	None:intergenic	35.0%
	AACTACAATACACACTGCAA+AGG	-	chr4_4:62551066-62551085	Msa0693600:CDS	35.0%
	GGAAAACAAATGGTACATTC+AGG	+	chr4_4:62551122-62551141	None:intergenic	35.0%
	GTGAATGCTTCACAAATACA+AGG	+	chr4_4:62551143-62551162	None:intergenic	35.0%
!!	CAGAAATAACTTGTTGGAAC+AGG	-	chr4_4:62551190-62551209	Msa0693600:intron	35.0%
	TCCTCAATAATGCCTTCAAT+CGG	+	chr4_4:62551260-62551279	None:intergenic	35.0%
	CAAAGATTAGAAGGCTTGAA+AGG	-	chr4_4:62551288-62551307	Msa0693600:CDS	35.0%
!!	AAGGTGGCTTGCTATAAATA+CGG	-	chr4_4:62551307-62551326	Msa0693600:CDS	35.0%
	AGCAATTACTTGAGGGAATA+GGG	+	chr4_4:62551344-62551363	None:intergenic	35.0%
	CAAAGTCAGCAATTACTTGA+GGG	+	chr4_4:62551351-62551370	None:intergenic	35.0%
	TCAAAGTCAGCAATTACTTG+AGG	+	chr4_4:62551352-62551371	None:intergenic	35.0%
!!!	AGTTTTTCAGGATCATGCAT+TGG	-	chr4_4:62551515-62551534	Msa0693600:intron	35.0%
	GTGAAATACCTTCGTATACA+GGG	-	chr4_4:62551545-62551564	Msa0693600:intron	35.0%
	TTATTGAGTCTAGGTTCAAC+CGG	-	chr4_4:62551617-62551636	Msa0693600:intron	35.0%
!!	TATCTTTGAAATCGACGAAC+CGG	+	chr4_4:62551639-62551658	None:intergenic	35.0%
	GACAAAAATGTGGTTTGATG+GGG	-	chr4_4:62551696-62551715	Msa0693600:intron	35.0%
	CCCCACTTTATATGAAGATG+TGG	-	chr4_4:62548847-62548866	Msa0693600:three_prime_UTR	40.0%
	TGTGGTTACCTATGAAAAGG+AGG	-	chr4_4:62548865-62548884	Msa0693600:three_prime_UTR	40.0%
	TACCTATGAAAAGGAGGAAG+AGG	-	chr4_4:62548871-62548890	Msa0693600:three_prime_UTR	40.0%
!	TTCCTCTTCCTCCTTTTCAT+AGG	+	chr4_4:62548876-62548895	None:intergenic	40.0%
	TTCAGCACCAGAGAAAGAAA+GGG	+	chr4_4:62549520-62549539	None:intergenic	40.0%
	ATTCAGCACCAGAGAAAGAA+AGG	+	chr4_4:62549521-62549540	None:intergenic	40.0%
	ATCATGTCTGTTGTGATGTC+CGG	-	chr4_4:62549543-62549562	Msa0693600:intron	40.0%
	CTAATAAGTTAATCGCCACC+CGG	+	chr4_4:62549565-62549584	None:intergenic	40.0%
	CCAGAACTTCTCTCTATTGT+TGG	+	chr4_4:62549640-62549659	None:intergenic	40.0%
	CCAACAATAGAGAGAAGTTC+TGG	-	chr4_4:62549637-62549656	Msa0693600:intron	40.0%
!	ACAATAGAGAGAAGTTCTGG+TGG	-	chr4_4:62549640-62549659	Msa0693600:intron	40.0%
!	CAATAGAGAGAAGTTCTGGT+GGG	-	chr4_4:62549641-62549660	Msa0693600:intron	40.0%
!!!	CTTTTTTCACCCTCAGAACA+TGG	-	chr4_4:62550065-62550084	Msa0693600:intron	40.0%
	ATCCCTGTGTAGAATAGTGA+TGG	-	chr4_4:62550101-62550120	Msa0693600:intron	40.0%
	TCCCTGTGTAGAATAGTGAT+GGG	-	chr4_4:62550102-62550121	Msa0693600:intron	40.0%
	TCCCATCACTATTCTACACA+GGG	+	chr4_4:62550106-62550125	None:intergenic	40.0%
	TTCCCATCACTATTCTACAC+AGG	+	chr4_4:62550107-62550126	None:intergenic	40.0%
!	TGTGTAGAATAGTGATGGGA+AGG	-	chr4_4:62550106-62550125	Msa0693600:intron	40.0%
!!	CAAGTGGGCTTTGAAATTTG+GGG	+	chr4_4:62550180-62550199	None:intergenic	40.0%
!!	TTAATTTAGTGGGCTTGGTG+GGG	+	chr4_4:62550210-62550229	None:intergenic	40.0%
!!	CTTTAATTTAGTGGGCTTGG+TGG	+	chr4_4:62550212-62550231	None:intergenic	40.0%
!!!	ATAGAAATTTTGGGGCTTGG+GGG	-	chr4_4:62550580-62550599	Msa0693600:intron	40.0%
	AGTAGAGCCGTCAATATCAT+GGG	+	chr4_4:62550709-62550728	None:intergenic	40.0%
	TTGTAGTTGTGCACATGATC+AGG	+	chr4_4:62551054-62551073	None:intergenic	40.0%
!	CAGTTGCTTTGAACCAATGT+AGG	+	chr4_4:62551095-62551114	None:intergenic	40.0%
	TTCGGAATCCTCATCAAGTA+GGG	-	chr4_4:62551226-62551245	Msa0693600:CDS	40.0%
!!	TCCGATTGAAGGCATTATTG+AGG	-	chr4_4:62551256-62551275	Msa0693600:CDS	40.0%
	AGATTAGAAGGCTTGAAAGG+TGG	-	chr4_4:62551291-62551310	Msa0693600:CDS	40.0%
	CAGCAATTACTTGAGGGAAT+AGG	+	chr4_4:62551345-62551364	None:intergenic	40.0%
	TTAGAAATGTCCACAGAACC+TGG	+	chr4_4:62551438-62551457	None:intergenic	40.0%
!	GATGGTCGTCATAGTTTTTC+AGG	-	chr4_4:62551503-62551522	Msa0693600:intron	40.0%
	CGTGAAATACCTTCGTATAC+AGG	-	chr4_4:62551544-62551563	Msa0693600:intron	40.0%
!!	GTGACTTTCGTTAGCTTGTA+TGG	+	chr4_4:62551593-62551612	None:intergenic	40.0%
!	CTGAATTGGTTCTCCTGATG+AGG	-	chr4_4:62548807-62548826	Msa0693600:three_prime_UTR	45.0%
	ACAAAACGGCTTGTGCACTA+AGG	+	chr4_4:62548939-62548958	None:intergenic	45.0%
!!	GCACAAGCCGTTTTGTTAAC+AGG	-	chr4_4:62548943-62548962	Msa0693600:three_prime_UTR	45.0%
	GATCATCTACAAGATGTCCC+TGG	-	chr4_4:62549379-62549398	Msa0693600:CDS	45.0%
!	GGGTGTTTCTAAAGATGCTG+TGG	-	chr4_4:62549420-62549439	Msa0693600:CDS	45.0%
	TCATGTCTGTTGTGATGTCC+GGG	-	chr4_4:62549544-62549563	Msa0693600:intron	45.0%
	AACAAGGCTGCTAGAGATTG+TGG	-	chr4_4:62549681-62549700	Msa0693600:intron	45.0%
!	GTGATGGGAAGGAACAGTAA+TGG	-	chr4_4:62550117-62550136	Msa0693600:intron	45.0%
	ATGGGAAGGAACAGTAATGG+AGG	-	chr4_4:62550120-62550139	Msa0693600:intron	45.0%
!	GAAGGAACAGTAATGGAGGA+TGG	-	chr4_4:62550124-62550143	Msa0693600:intron	45.0%
!!	TAATTTAGTGGGCTTGGTGG+GGG	+	chr4_4:62550209-62550228	None:intergenic	45.0%
!!	GGGCTTTAATTTAGTGGGCT+TGG	+	chr4_4:62550215-62550234	None:intergenic	45.0%
	TTTGTGGGCTTGCATCAATG+TGG	-	chr4_4:62550619-62550638	Msa0693600:intron	45.0%
	TTGTGGGCTTGCATCAATGT+GGG	-	chr4_4:62550620-62550639	Msa0693600:intron	45.0%
	TTTCAAGCCCCCTTACTATG+TGG	-	chr4_4:62550661-62550680	Msa0693600:intron	45.0%
	TTCAAGCCCCCTTACTATGT+GGG	-	chr4_4:62550662-62550681	Msa0693600:intron	45.0%
!	ATCATGGGGCCTTGAAGTTT+TGG	+	chr4_4:62550694-62550713	None:intergenic	45.0%
	TCAAGGCCCCATGATATTGA+CGG	-	chr4_4:62550699-62550718	Msa0693600:intron	45.0%
	GTAGAGCCGTCAATATCATG+GGG	+	chr4_4:62550708-62550727	None:intergenic	45.0%
	GAGTAGAGCCGTCAATATCA+TGG	+	chr4_4:62550710-62550729	None:intergenic	45.0%
	CAAGCCAAAAAGTTGCTGAG+CGG	-	chr4_4:62550890-62550909	Msa0693600:intron	45.0%
	AAGCCAAAAAGTTGCTGAGC+GGG	-	chr4_4:62550891-62550910	Msa0693600:intron	45.0%
	GGCATTAGCGAGTGAAGTTT+AGG	+	chr4_4:62551033-62551052	None:intergenic	45.0%
	ACTGCAAAGGACTCCTACAT+TGG	-	chr4_4:62551079-62551098	Msa0693600:intron	45.0%
	ACAGGGATGTAGCTCTTCTT+CGG	-	chr4_4:62551208-62551227	Msa0693600:CDS	45.0%
	CTTCGGAATCCTCATCAAGT+AGG	-	chr4_4:62551225-62551244	Msa0693600:CDS	45.0%
	AGAGACTACCCTACTTGATG+AGG	+	chr4_4:62551237-62551256	None:intergenic	45.0%
!!!	GATATTTTGGCCAGGTTCTG+TGG	-	chr4_4:62551425-62551444	Msa0693600:intron	45.0%
!!	ATCAAAGGAGGCGTCAATGA+TGG	-	chr4_4:62551485-62551504	Msa0693600:intron	45.0%
	TCAGGTACCCCATTACTCGT+TGG	-	chr4_4:62549717-62549736	Msa0693600:intron	50.0%
!!!	TGGTGGGGGCTTTTTCAAGT+GGG	+	chr4_4:62550195-62550214	None:intergenic	50.0%
!!!	TTGGTGGGGGCTTTTTCAAG+TGG	+	chr4_4:62550196-62550215	None:intergenic	50.0%
	AGGGTAGTCTCTCCGATTGA+AGG	-	chr4_4:62551245-62551264	Msa0693600:CDS	50.0%
	AACTCGAGCCCTGTATACGA+AGG	+	chr4_4:62551556-62551575	None:intergenic	50.0%
	ATGTGGTTTGATGGGGCCAA+TGG	-	chr4_4:62551703-62551722	Msa0693600:intron	50.0%
	AAAGATGCTGTGGCAGCAGC+AGG	-	chr4_4:62549430-62549449	Msa0693600:CDS	55.0%
	TGTCTGTTGTGATGTCCGGG+TGG	-	chr4_4:62549547-62549566	Msa0693600:intron	55.0%
!	GCACCCGCTCAGCAACTTTT+TGG	+	chr4_4:62550897-62550916	None:intergenic	55.0%
	TTTGATGGGGCCAATGGCCA+TGG	-	chr4_4:62551709-62551728	Msa0693600:intron	55.0%
	GTATTGCGGAAAGTGGGCCA+TGG	+	chr4_4:62551729-62551748	None:intergenic	55.0%
	AGCCCCCTTACTATGTGGGC+TGG	-	chr4_4:62550666-62550685	Msa0693600:intron	60.0%
	GCCCCCTTACTATGTGGGCT+GGG	-	chr4_4:62550667-62550686	Msa0693600:intron	60.0%
	CCCCAGCCCACATAGTAAGG+GGG	+	chr4_4:62550671-62550690	None:intergenic	60.0%
!	CCCCCTTACTATGTGGGCTG+GGG	-	chr4_4:62550668-62550687	Msa0693600:intron	60.0%
	GCCCCAGCCCACATAGTAAG+GGG	+	chr4_4:62550672-62550691	None:intergenic	60.0%
	GGCCCCAGCCCACATAGTAA+GGG	+	chr4_4:62550673-62550692	None:intergenic	60.0%
	TGGCCCCAGCCCACATAGTA+AGG	+	chr4_4:62550674-62550693	None:intergenic	60.0%
	GGGCTGGGGCCAAAACTTCA+AGG	-	chr4_4:62550682-62550701	Msa0693600:intron	60.0%
	GGAAAGTGGGCCATGGCCAT+TGG	+	chr4_4:62551722-62551741	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	62548770	62551926	62548770	ID=Msa0693600;Name=Msa0693600
chr4_4	mRNA	62548770	62551926	62548770	ID=Msa0693600-mRNA-1;Parent=Msa0693600;Name=Msa0693600-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0\|0.5\|0.4\|0.8\|1\|1\|5\|422\|209
chr4_4	exon	62548770	62549257	62548770	ID=Msa0693600-mRNA-1:exon:17578;Parent=Msa0693600-mRNA-1
chr4_4	exon	62549368	62549520	62549368	ID=Msa0693600-mRNA-1:exon:17577;Parent=Msa0693600-mRNA-1
chr4_4	exon	62550976	62551089	62550976	ID=Msa0693600-mRNA-1:exon:17576;Parent=Msa0693600-mRNA-1
chr4_4	exon	62551207	62551332	62551207	ID=Msa0693600-mRNA-1:exon:17575;Parent=Msa0693600-mRNA-1
chr4_4	exon	62551756	62551926	62551756	ID=Msa0693600-mRNA-1:exon:17574;Parent=Msa0693600-mRNA-1
chr4_4	CDS	62551756	62551926	62551756	ID=Msa0693600-mRNA-1:cds;Parent=Msa0693600-mRNA-1
chr4_4	CDS	62551207	62551332	62551207	ID=Msa0693600-mRNA-1:cds;Parent=Msa0693600-mRNA-1
chr4_4	CDS	62550976	62551089	62550976	ID=Msa0693600-mRNA-1:cds;Parent=Msa0693600-mRNA-1
chr4_4	CDS	62549368	62549520	62549368	ID=Msa0693600-mRNA-1:cds;Parent=Msa0693600-mRNA-1
chr4_4	CDS	62549192	62549257	62549192	ID=Msa0693600-mRNA-1:cds;Parent=Msa0693600-mRNA-1
chr4_4	three_prime_UTR	62548770	62549191	62548770	ID=Msa0693600-mRNA-1:three_prime_utr;Parent=Msa0693600-mRNA-1

Gene Sequence

>Msa0693600

ATGTTTCAAACCTTCGGTGATCTTATTCAAAGAGCTTCTGAATTGGTTCTCCTGATGAGGATACAAAGAAAAAGAAACCCCACTTTATATGAAGATGTGGTTACCTATGAAAAGGAGGAAGAGGAAGAGCCACAAAAGAGTGATGATTTTGAAGGTGAAAAGGGTTCCTTAATTCTAATTGAGGTTGATCATCTACAAGATGTCCCTGGTCCATACATTCAGATAAAGGGTGTTTCTAAAGATGCTGTGGCAGCAGCAGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAGAGTTACCTTGAAATAGTTTTGGAAAGACTACCAACAATAGAGAGAAGTTCTGGTGGGATTAATTTTCAGCAATCAACAAGGCTGCTAGAGATTGTGGATTTTATTCAATCTCAGGCATTATCATTTGGCAGAAATAACTTGTTGGAACAGGGATGTAGCTCTTCTTCGGAATCCTCATCAAGTAGGGTAGTCTCTCCGATTGAAGGCATTATTGAGGAGATGCAATCAAAGATTAGAAGGCTTGAAAGGTGGCTTGCTATAAATACGGTTCTGTGGACATTTCTAATGTCAGCTATTGTTGGTTATTCACTTTATCAAAGGAGGCGTCAATGA

Protein sequence

>Msa0693600

MFQTFGDLIQRASELVLLMRIQRKRNPTLYEDVVTYEKEEEEEPQKSDDFEGEKGSLILIEVDHLQDVPGPYIQIKGVSKDAVAAAGSMLKLDGSYTTKSYLEIVLERLPTIERSSGGINFQQSTRLLEIVDFIQSQALSFGRNNLLEQGCSSSSESSSSRVVSPIEGIIEEMQSKIRRLERWLAINTVLWTFLMSAIVGYSLYQRRRQ*