Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663710 | XP_003604261.2 | 92.133 | 572 | 37 | 2 | 3 | 574 | 37 | 600 | 0.0 | 1099 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663710 | sp|Q9SWH5|FUT1_ARATH | 47.257 | 474 | 236 | 5 | 102 | 569 | 93 | 558 | 4.27e-146 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663710 | G7JEG8 | 92.133 | 572 | 37 | 2 | 3 | 574 | 37 | 600 | 0.0 | 1099 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011720 | Msa0663710 | 0.806568 | 7.721233e-50 | -8.615850e-47 |
| Msa0012060 | Msa0663710 | 0.807826 | 4.182006e-50 | -8.615850e-47 |
| Msa0017510 | Msa0663710 | 0.810297 | 1.236312e-50 | -8.615850e-47 |
| Msa0039330 | Msa0663710 | 0.816637 | 4.991296e-52 | -8.615850e-47 |
| Msa0050760 | Msa0663710 | 0.805078 | 1.587885e-49 | -8.615850e-47 |
| Msa0074200 | Msa0663710 | 0.802065 | 6.693816e-49 | -8.615850e-47 |
| Msa0078660 | Msa0663710 | 0.818760 | 1.656685e-52 | -8.615850e-47 |
| Msa0089360 | Msa0663710 | 0.801411 | 9.119360e-49 | -8.615850e-47 |
| Msa0096450 | Msa0663710 | 0.834340 | 3.171787e-56 | -8.615850e-47 |
| Msa0105420 | Msa0663710 | 0.803566 | 3.278604e-49 | -8.615850e-47 |
| Msa0607540 | Msa0663710 | 0.831838 | 1.330568e-55 | -8.615850e-47 |
| Msa0610590 | Msa0663710 | 0.825806 | 3.834549e-54 | -8.615850e-47 |
| Msa0620790 | Msa0663710 | 0.818586 | 1.814136e-52 | -8.615850e-47 |
| Msa0621590 | Msa0663710 | 0.813869 | 2.057417e-51 | -8.615850e-47 |
| Msa0625930 | Msa0663710 | 0.944124 | 3.466274e-103 | -8.615850e-47 |
| Msa0647830 | Msa0663710 | 0.857051 | 2.124033e-62 | -8.615850e-47 |
| Msa0651190 | Msa0663710 | 0.830560 | 2.742309e-55 | -8.615850e-47 |
| Msa0657970 | Msa0663710 | 0.807843 | 4.146449e-50 | -8.615850e-47 |
| Msa0658570 | Msa0663710 | 0.815110 | 1.093425e-51 | -8.615850e-47 |
| Msa0662650 | Msa0663710 | 0.801176 | 1.018561e-48 | -8.615850e-47 |
| Msa0663240 | Msa0663710 | 0.812891 | 3.373669e-51 | -8.615850e-47 |
| Msa0663710 | Msa0663920 | 0.806677 | 7.325053e-50 | -8.615850e-47 |
| Msa0663710 | Msa0664950 | 0.806929 | 6.478945e-50 | -8.615850e-47 |
| Msa0663710 | Msa0678820 | 0.839460 | 1.563517e-57 | -8.615850e-47 |
| Msa0663710 | Msa0688070 | 0.815811 | 7.636447e-52 | -8.615850e-47 |
| Msa0663710 | Msa0688480 | 0.808321 | 3.280691e-50 | -8.615850e-47 |
| Msa0663710 | Msa0690440 | 0.858398 | 8.468262e-63 | -8.615850e-47 |
| Msa0663710 | Msa0692230 | 0.816072 | 6.678130e-52 | -8.615850e-47 |
| Msa0663710 | Msa0693380 | 0.820901 | 5.368357e-53 | -8.615850e-47 |
| Msa0663710 | Msa0723990 | 0.805237 | 1.470826e-49 | -8.615850e-47 |
| Msa0663710 | Msa0798860 | 0.801972 | 6.997448e-49 | -8.615850e-47 |
| Msa0663710 | Msa0806090 | 0.811489 | 6.826095e-51 | -8.615850e-47 |
| Msa0663710 | Msa0828540 | 0.818681 | 1.726370e-52 | -8.615850e-47 |
| Msa0663710 | Msa0832370 | 0.803274 | 3.769182e-49 | -8.615850e-47 |
| Msa0663710 | Msa0843250 | 0.801894 | 7.260362e-49 | -8.615850e-47 |
| Msa0663710 | Msa0846810 | 0.818106 | 2.330361e-52 | -8.615850e-47 |
| Msa0663710 | Msa0860410 | 0.806173 | 9.353625e-50 | -8.615850e-47 |
| Msa0663710 | Msa0880140 | 0.806271 | 8.919565e-50 | -8.615850e-47 |
| Msa0663710 | Msa0893810 | 0.811622 | 6.384240e-51 | -8.615850e-47 |
| Msa0663710 | Msa0896220 | 0.801111 | 1.050388e-48 | -8.615850e-47 |
| Msa0663710 | Msa0907070 | 0.828712 | 7.717421e-55 | -8.615850e-47 |
| Msa0663710 | Msa0910980 | -0.801924 | 7.157930e-49 | -8.615850e-47 |
| Msa0663710 | Msa0944550 | 0.808768 | 2.633354e-50 | -8.615850e-47 |
| Msa0663710 | Msa0953550 | 0.808349 | 3.236132e-50 | -8.615850e-47 |
| Msa0663710 | Msa0954130 | 0.806233 | 9.086016e-50 | -8.615850e-47 |
| Msa0663710 | Msa0954550 | 0.818019 | 2.438317e-52 | -8.615850e-47 |
| Msa0663710 | Msa0969520 | 0.800141 | 1.656208e-48 | -8.615850e-47 |
| Msa0663710 | Msa0976250 | 0.800995 | 1.109206e-48 | -8.615850e-47 |
| Msa0663710 | Msa0982270 | 0.826210 | 3.074150e-54 | -8.615850e-47 |
| Msa0663710 | Msa0983090 | 0.802243 | 6.154176e-49 | -8.615850e-47 |
| Msa0663710 | Msa0991670 | 0.803719 | 3.047891e-49 | -8.615850e-47 |
| Msa0663710 | Msa0992490 | -0.815473 | 9.082110e-52 | -8.615850e-47 |
| Msa0663710 | Msa0993290 | 0.806985 | 6.303305e-50 | -8.615850e-47 |
| Msa0663710 | Msa0993600 | 0.805835 | 1.101800e-49 | -8.615850e-47 |
| Msa0663710 | Msa1026760 | 0.806550 | 7.790541e-50 | -8.615850e-47 |
| Msa0663710 | Msa1030970 | 0.808343 | 3.245537e-50 | -8.615850e-47 |
| Msa0663710 | Msa1068200 | -0.838732 | 2.413856e-57 | -8.615850e-47 |
| Msa0663710 | Msa1075080 | -0.807206 | 5.661217e-50 | -8.615850e-47 |
| Msa0663710 | Msa1075220 | -0.847077 | 1.452213e-59 | -8.615850e-47 |
| Msa0663710 | Msa1082500 | 0.838736 | 2.408285e-57 | -8.615850e-47 |
| Msa0663710 | Msa1084260 | 0.813098 | 3.040057e-51 | -8.615850e-47 |
| Msa0663710 | Msa1090260 | 0.836905 | 7.112335e-57 | -8.615850e-47 |
| Msa0663710 | Msa1100480 | 0.802635 | 5.108532e-49 | -8.615850e-47 |
| Msa0663710 | Msa1116130 | -0.834334 | 3.183151e-56 | -8.615850e-47 |
| Msa0663710 | Msa1139000 | -0.838931 | 2.144526e-57 | -8.615850e-47 |
| Msa0663710 | Msa1143270 | 0.803756 | 2.995262e-49 | -8.615850e-47 |
| Msa0663710 | Msa1156340 | -0.819656 | 1.035638e-52 | -8.615850e-47 |
| Msa0663710 | Msa1162550 | -0.851974 | 6.257205e-61 | -8.615850e-47 |
| Msa0663710 | Msa1166500 | -0.802567 | 5.277083e-49 | -8.615850e-47 |
| Msa0663710 | Msa1205010 | -0.807218 | 5.626497e-50 | -8.615850e-47 |
| Msa0663710 | Msa1205130 | 0.810723 | 1.000076e-50 | -8.615850e-47 |
| Msa0663710 | Msa1211150 | -0.802395 | 5.726332e-49 | -8.615850e-47 |
| Msa0663710 | Msa1224480 | 0.815637 | 8.347218e-52 | -8.615850e-47 |
| Msa0663710 | Msa1229600 | 0.820970 | 5.175128e-53 | -8.615850e-47 |
| Msa0663710 | Msa1233500 | 0.842816 | 2.052846e-58 | -8.615850e-47 |
| Msa0663710 | Msa1233890 | 0.839653 | 1.392991e-57 | -8.615850e-47 |
| Msa0663710 | Msa1239530 | 0.854417 | 1.247980e-61 | -8.615850e-47 |
| Msa0663710 | Msa1246500 | 0.800730 | 1.256825e-48 | -8.615850e-47 |
| Msa0663710 | Msa1271200 | 0.815296 | 9.943558e-52 | -8.615850e-47 |
| Msa0663710 | Msa1271210 | 0.809089 | 2.247840e-50 | -8.615850e-47 |
| Msa0663710 | Msa1271300 | 0.822595 | 2.177414e-53 | -8.615850e-47 |
| Msa0663710 | Msa1275770 | 0.800752 | 1.243915e-48 | -8.615850e-47 |
| Msa0663710 | Msa1278840 | 0.801437 | 9.008814e-49 | -8.615850e-47 |
| Msa0663710 | Msa1279210 | 0.839912 | 1.192618e-57 | -8.615850e-47 |
| Msa0663710 | Msa1279650 | 0.818094 | 2.345412e-52 | -8.615850e-47 |
| Msa0663710 | Msa1283860 | 0.808970 | 2.383477e-50 | -8.615850e-47 |
| Msa0663710 | Msa1307740 | 0.812029 | 5.205917e-51 | -8.615850e-47 |
| Msa0663710 | Msa1308480 | 0.800787 | 1.223203e-48 | -8.615850e-47 |
| Msa0663710 | Msa1308590 | 0.824149 | 9.436137e-54 | -8.615850e-47 |
| Msa0663710 | Msa1308640 | 0.811533 | 6.677278e-51 | -8.615850e-47 |
| Msa0663710 | Msa1310210 | 0.826452 | 2.692422e-54 | -8.615850e-47 |
| Msa0663710 | Msa1314340 | 0.804975 | 1.668817e-49 | -8.615850e-47 |
| Msa0663710 | Msa1318240 | 0.803609 | 3.213131e-49 | -8.615850e-47 |
| Msa0663710 | Msa1322890 | 0.823205 | 1.570061e-53 | -8.615850e-47 |
| Msa0663710 | Msa1340650 | 0.801556 | 8.516101e-49 | -8.615850e-47 |
| Msa0663710 | Msa1348950 | 0.804619 | 1.979945e-49 | -8.615850e-47 |
| Msa0663710 | Msa1351620 | 0.802105 | 6.568333e-49 | -8.615850e-47 |
| Msa0663710 | Msa1357530 | 0.825839 | 3.765142e-54 | -8.615850e-47 |
| Msa0663710 | Msa1362880 | 0.811916 | 5.511781e-51 | -8.615850e-47 |
| Msa0663710 | Msa1369530 | 0.803494 | 3.393507e-49 | -8.615850e-47 |
| Msa0663710 | Msa1376890 | 0.806684 | 7.298149e-50 | -8.615850e-47 |
| Msa0663710 | Msa1384350 | 0.842802 | 2.070282e-58 | -8.615850e-47 |
| Msa0663710 | Msa1392260 | 0.809909 | 1.499031e-50 | -8.615850e-47 |
| Msa0663710 | Msa1393410 | 0.830420 | 2.967308e-55 | -8.615850e-47 |
| Msa0663710 | Msa1404670 | 0.809989 | 1.440687e-50 | -8.615850e-47 |
| Msa0663710 | Msa1408790 | 0.802822 | 4.674017e-49 | -8.615850e-47 |
| Msa0663710 | Msa1411020 | 0.813034 | 3.139530e-51 | -8.615850e-47 |
| Msa0663710 | Msa1423880 | 0.805073 | 1.591768e-49 | -8.615850e-47 |
| Msa0663710 | Msa1424290 | 0.815535 | 8.796122e-52 | -8.615850e-47 |
| Msa0663710 | Msa1429900 | 0.802390 | 5.738335e-49 | -8.615850e-47 |
| Msa0663710 | Msa1434350 | 0.808596 | 2.865231e-50 | -8.615850e-47 |
| Msa0663710 | Msa1435420 | 0.830101 | 3.550083e-55 | -8.615850e-47 |
| Msa0663710 | Msa1436040 | 0.803159 | 3.981817e-49 | -8.615850e-47 |
| Msa0663710 | Msa1439320 | 0.819468 | 1.143493e-52 | -8.615850e-47 |
| Msa0663710 | Msa1440600 | 0.803823 | 2.900153e-49 | -8.615850e-47 |
| Msa0663710 | Msa1451620 | -0.839427 | 1.595220e-57 | -8.615850e-47 |
| Msa0663710 | Msa1455390 | 0.808300 | 3.314379e-50 | -8.615850e-47 |
| Msa0663710 | Msa1461250 | -0.806575 | 7.697994e-50 | -8.615850e-47 |
| Msa0663710 | Msa1464940 | 0.834266 | 3.310103e-56 | -8.615850e-47 |
| Msa0122590 | Msa0663710 | 0.815457 | 9.155985e-52 | -8.615850e-47 |
| Msa0152170 | Msa0663710 | 0.802484 | 5.489777e-49 | -8.615850e-47 |
| Msa0157290 | Msa0663710 | 0.809725 | 1.641812e-50 | -8.615850e-47 |
| Msa0188830 | Msa0663710 | 0.801956 | 7.049842e-49 | -8.615850e-47 |
| Msa0195770 | Msa0663710 | 0.807773 | 4.291618e-50 | -8.615850e-47 |
| Msa0217400 | Msa0663710 | 0.830644 | 2.614540e-55 | -8.615850e-47 |
| Msa0220740 | Msa0663710 | 0.800626 | 1.319654e-48 | -8.615850e-47 |
| Msa0226890 | Msa0663710 | 0.821324 | 4.289379e-53 | -8.615850e-47 |
| Msa0233300 | Msa0663710 | 0.808437 | 3.099335e-50 | -8.615850e-47 |
| Msa0234430 | Msa0663710 | 0.827602 | 1.428940e-54 | -8.615850e-47 |
| Msa0373930 | Msa0663710 | 0.811635 | 6.342862e-51 | -8.615850e-47 |
| Msa0376590 | Msa0663710 | 0.823465 | 1.365344e-53 | -8.615850e-47 |
| Msa0379640 | Msa0663710 | 0.817537 | 3.133122e-52 | -8.615850e-47 |
| Msa0380040 | Msa0663710 | 0.803177 | 3.948459e-49 | -8.615850e-47 |
| Msa0388960 | Msa0663710 | 0.810182 | 1.308755e-50 | -8.615850e-47 |
| Msa0389340 | Msa0663710 | 0.827225 | 1.759572e-54 | -8.615850e-47 |
| Msa0389810 | Msa0663710 | 0.814277 | 1.671850e-51 | -8.615850e-47 |
| Msa0409200 | Msa0663710 | 0.800686 | 1.282582e-48 | -8.615850e-47 |
| Msa0428930 | Msa0663710 | 0.804753 | 1.856660e-49 | -8.615850e-47 |
| Msa0442850 | Msa0663710 | 0.818267 | 2.142966e-52 | -8.615850e-47 |
| Msa0449760 | Msa0663710 | 0.815195 | 1.046841e-51 | -8.615850e-47 |
| Msa0458440 | Msa0663710 | 0.812352 | 4.427543e-51 | -8.615850e-47 |
| Msa0465680 | Msa0663710 | -0.801936 | 7.117472e-49 | -8.615850e-47 |
| Msa0466390 | Msa0663710 | 0.826637 | 2.431834e-54 | -8.615850e-47 |
| Msa0468130 | Msa0663710 | 0.809697 | 1.664406e-50 | -8.615850e-47 |
| Msa0473240 | Msa0663710 | 0.817273 | 3.592515e-52 | -8.615850e-47 |
| Msa0480600 | Msa0663710 | 0.809303 | 2.022802e-50 | -8.615850e-47 |
| Msa0243710 | Msa0663710 | 0.815702 | 8.073655e-52 | -8.615850e-47 |
| Msa0257250 | Msa0663710 | 0.803369 | 3.602651e-49 | -8.615850e-47 |
| Msa0258760 | Msa0663710 | 0.844410 | 7.693719e-59 | -8.615850e-47 |
| Msa0266000 | Msa0663710 | -0.807730 | 4.381266e-50 | -8.615850e-47 |
| Msa0272720 | Msa0663710 | 0.809093 | 2.243259e-50 | -8.615850e-47 |
| Msa0276770 | Msa0663710 | 0.812495 | 4.118740e-51 | -8.615850e-47 |
| Msa0296560 | Msa0663710 | 0.812059 | 5.129026e-51 | -8.615850e-47 |
| Msa0297960 | Msa0663710 | 0.801235 | 9.910023e-49 | -8.615850e-47 |
| Msa0315290 | Msa0663710 | 0.826655 | 2.407522e-54 | -8.615850e-47 |
| Msa0323080 | Msa0663710 | 0.830175 | 3.405082e-55 | -8.615850e-47 |
| Msa0331920 | Msa0663710 | 0.823889 | 1.086190e-53 | -8.615850e-47 |
| Msa0335040 | Msa0663710 | 0.829301 | 5.555996e-55 | -8.615850e-47 |
| Msa0344830 | Msa0663710 | 0.815073 | 1.114332e-51 | -8.615850e-47 |
| Msa0484780 | Msa0663710 | 0.823827 | 1.123124e-53 | -8.615850e-47 |
| Msa0498220 | Msa0663710 | 0.819461 | 1.147285e-52 | -8.615850e-47 |
| Msa0512900 | Msa0663710 | 0.803378 | 3.587224e-49 | -8.615850e-47 |
| Msa0516370 | Msa0663710 | 0.818899 | 1.540733e-52 | -8.615850e-47 |
| Msa0523460 | Msa0663710 | 0.812718 | 3.682865e-51 | -8.615850e-47 |
| Msa0535950 | Msa0663710 | 0.815731 | 7.954860e-52 | -8.615850e-47 |
| Msa0536220 | Msa0663710 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa0540070 | Msa0663710 | 0.810988 | 8.766805e-51 | -8.615850e-47 |
| Msa0543900 | Msa0663710 | 0.823270 | 1.515767e-53 | -8.615850e-47 |
| Msa0553460 | Msa0663710 | 0.856774 | 2.563281e-62 | -8.615850e-47 |
| Msa0558690 | Msa0663710 | 0.810875 | 9.272836e-51 | -8.615850e-47 |
| Msa0562440 | Msa0663710 | 0.829014 | 6.524116e-55 | -8.615850e-47 |
| Msa0564510 | Msa0663710 | 0.823450 | 1.376305e-53 | -8.615850e-47 |
| Msa0570640 | Msa0663710 | 0.802443 | 5.597894e-49 | -8.615850e-47 |
| Msa0574850 | Msa0663710 | 0.809190 | 2.138318e-50 | -8.615850e-47 |
| Msa0578970 | Msa0663710 | 0.826227 | 3.045124e-54 | -8.615850e-47 |
| Msa0585700 | Msa0663710 | 0.942755 | 4.095180e-102 | -8.615850e-47 |
| Msa0599580 | Msa0663710 | 0.806209 | 9.193622e-50 | -8.615850e-47 |
| Msa0599770 | Msa0663710 | 0.833009 | 6.819942e-56 | -8.615850e-47 |
| Msa0599890 | Msa0663710 | 0.828111 | 1.078055e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663710 | MtrunA17_Chr4g0001511 | 92.133 | 572 | 37 | 2 | 3 | 574 | 149 | 712 | 0.0 | 1097 |
| Msa0663710 | MtrunA17_Chr2g0286741 | 59.545 | 571 | 205 | 9 | 1 | 569 | 28 | 574 | 0.0 | 665 |
| Msa0663710 | MtrunA17_Chr1g0196981 | 57.084 | 487 | 202 | 3 | 87 | 571 | 5 | 486 | 0.0 | 569 |
| Msa0663710 | MtrunA17_Chr8g0388711 | 49.385 | 569 | 268 | 8 | 4 | 569 | 30 | 581 | 0.0 | 542 |
| Msa0663710 | MtrunA17_Chr4g0060941 | 43.432 | 472 | 257 | 4 | 104 | 571 | 111 | 576 | 4.55e-133 | 400 |
| Msa0663710 | MtrunA17_Chr3g0091781 | 42.054 | 516 | 269 | 11 | 70 | 574 | 41 | 537 | 1.57e-131 | 395 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663710 | AT2G03220.1 | 47.257 | 474 | 236 | 5 | 102 | 569 | 93 | 558 | 4.34e-147 | 436 |
| Msa0663710 | AT2G15370.1 | 43.515 | 478 | 254 | 6 | 104 | 571 | 61 | 532 | 1.74e-139 | 415 |
| Msa0663710 | AT1G14100.1 | 44.099 | 483 | 248 | 10 | 103 | 573 | 44 | 516 | 3.51e-138 | 411 |
| Msa0663710 | AT2G15350.1 | 42.797 | 479 | 256 | 6 | 104 | 571 | 42 | 513 | 1.18e-137 | 410 |
| Msa0663710 | AT1G14080.1 | 43.497 | 469 | 249 | 6 | 103 | 561 | 63 | 525 | 1.27e-136 | 408 |
| Msa0663710 | AT2G15390.2 | 41.884 | 499 | 271 | 8 | 83 | 571 | 45 | 534 | 1.79e-136 | 407 |
| Msa0663710 | AT2G15390.1 | 42.797 | 479 | 258 | 7 | 103 | 571 | 30 | 502 | 2.00e-136 | 406 |
| Msa0663710 | AT2G03210.3 | 43.145 | 496 | 267 | 6 | 86 | 571 | 79 | 569 | 5.99e-135 | 405 |
| Msa0663710 | AT2G03210.1 | 42.886 | 499 | 267 | 6 | 86 | 571 | 45 | 538 | 7.04e-135 | 404 |
| Msa0663710 | AT2G03210.2 | 42.886 | 499 | 267 | 6 | 86 | 571 | 79 | 572 | 1.93e-134 | 404 |
| Msa0663710 | AT1G14110.1 | 41.102 | 472 | 223 | 6 | 104 | 569 | 46 | 468 | 4.20e-123 | 371 |
| Msa0663710 | AT1G74420.1 | 39.400 | 467 | 262 | 8 | 83 | 541 | 66 | 519 | 8.42e-105 | 325 |
| Msa0663710 | AT1G74420.2 | 40.440 | 455 | 250 | 8 | 95 | 541 | 82 | 523 | 1.58e-104 | 325 |
| Msa0663710 | AT1G74420.4 | 39.400 | 467 | 262 | 8 | 83 | 541 | 104 | 557 | 7.09e-104 | 324 |
| Msa0663710 | AT1G74420.3 | 40.440 | 455 | 250 | 8 | 95 | 541 | 120 | 561 | 9.61e-104 | 324 |
Find 95 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTACTTCTTTGTCTACTTT+TGG | 0.201160 | 4_4:+2604190 | Msa0663710:CDS |
| TATAAATTCTAAGAACATTA+AGG | 0.211892 | 4_4:+2603232 | Msa0663710:CDS |
| TTTAAATTATCACCGTATTC+TGG | 0.239005 | 4_4:-2604016 | None:intergenic |
| ACGAATAAATCAACTTCTTC+AGG | 0.252310 | 4_4:+2604049 | Msa0663710:CDS |
| AGCTAACAATAATTCAAAAT+TGG | 0.265569 | 4_4:+2603505 | Msa0663710:CDS |
| CAAAGTGCAAATACCTTATC+TGG | 0.292189 | 4_4:+2603264 | Msa0663710:CDS |
| TCAGATGGTGCCAACATAAA+AGG | 0.304553 | 4_4:+2602262 | Msa0663710:CDS |
| GCTAAAGCAGATGAGAAAAT+AGG | 0.324523 | 4_4:+2603812 | Msa0663710:CDS |
| TTGTGGTAATCCTTACCATT+AGG | 0.335624 | 4_4:-2603194 | None:intergenic |
| TCTTTCATACCAAGTACTTT+TGG | 0.362190 | 4_4:-2603926 | None:intergenic |
| GTGTTATGCTCGTAAGATTC+AGG | 0.364270 | 4_4:+2603360 | Msa0663710:CDS |
| TGGACACCGGCTAATGGTTT+AGG | 0.366798 | 4_4:+2603284 | Msa0663710:CDS |
| ATAAATTCTAAGAACATTAA+GGG | 0.369064 | 4_4:+2603233 | Msa0663710:CDS |
| TCCTATCCTTAGTGACTTGA+AGG | 0.372010 | 4_4:-2602031 | None:intergenic |
| CACAAGCTTCTCTCTCTTTG+AGG | 0.384231 | 4_4:+2602144 | Msa0663710:CDS |
| GGATATGTTGCTCAAGGCTT+GGG | 0.386546 | 4_4:+2604211 | Msa0663710:CDS |
| CTTATCTGGACACCGGCTAA+TGG | 0.389537 | 4_4:+2603278 | Msa0663710:CDS |
| CATTTACATGAGGAAATGTA+AGG | 0.397294 | 4_4:+2604384 | Msa0663710:CDS |
| TACAAACCTGTTGTTGTAGC+TGG | 0.406944 | 4_4:-2602826 | None:intergenic |
| TTGCAGCCATGCTAACCATT+TGG | 0.409888 | 4_4:-2603310 | None:intergenic |
| AAATAGTTAGAGATGTTTCA+TGG | 0.421838 | 4_4:+2604441 | Msa0663710:exon |
| GGAAAAGGTAGCGTCCTAAA+TGG | 0.422451 | 4_4:-2603736 | None:intergenic |
| GATTGAACACTCTTATTTGA+AGG | 0.425603 | 4_4:-2603835 | None:intergenic |
| CTCAAGGCTTGGGAAATTTG+AGG | 0.429093 | 4_4:+2604221 | Msa0663710:CDS |
| TTCGATATTAAATATGAAGA+AGG | 0.430936 | 4_4:-2603134 | None:intergenic |
| AAAGAATGTTGTAAATCTCT+TGG | 0.434299 | 4_4:-2602065 | None:intergenic |
| GAAAGACCAGCTACAACAAC+AGG | 0.435452 | 4_4:+2602820 | Msa0663710:CDS |
| TGGATATGTTGCTCAAGGCT+TGG | 0.436642 | 4_4:+2604210 | Msa0663710:CDS |
| CATAGAAGGTGTGGACCTAA+TGG | 0.437830 | 4_4:+2603179 | Msa0663710:CDS |
| TGAGAAGAGTTTATGTGGTA+AGG | 0.442079 | 4_4:-2601993 | None:intergenic |
| CTCTTTGAGGACTTTACAAA+AGG | 0.445621 | 4_4:+2602157 | Msa0663710:CDS |
| AAAGGCAAGGTACTACTTGT+TGG | 0.448202 | 4_4:+2602175 | Msa0663710:CDS |
| CGAATAAATCAACTTCTTCA+GGG | 0.450484 | 4_4:+2604050 | Msa0663710:CDS |
| GCTTCTTGTGGAGTTAAAGT+AGG | 0.453450 | 4_4:-2603857 | None:intergenic |
| TGGTAGTAACTTATTGTGAA+TGG | 0.456552 | 4_4:-2603906 | None:intergenic |
| TTTATGAACTCTTCCTCCAT+TGG | 0.459680 | 4_4:-2602236 | None:intergenic |
| ATGTAGAGTTGGATCATTTG+TGG | 0.462453 | 4_4:-2602991 | None:intergenic |
| AAACTCTTCTCAATATATCA+TGG | 0.466805 | 4_4:+2602004 | Msa0663710:five_prime_UTR |
| GCGTCTTTATATCCAGAATA+CGG | 0.468536 | 4_4:+2604004 | Msa0663710:CDS |
| AAATATGAAGAAGGTTTATG+AGG | 0.471182 | 4_4:-2603125 | None:intergenic |
| GCTTGGGAAATTTGAGGCCA+TGG | 0.471407 | 4_4:+2604227 | Msa0663710:CDS |
| TAAGCATAATATGAAAGCTT+GGG | 0.479892 | 4_4:+2604129 | Msa0663710:CDS |
| CTTCATTCGAAGGGTGGAAA+AGG | 0.480370 | 4_4:-2603751 | None:intergenic |
| CATTAGCCGGTGTCCAGATA+AGG | 0.489679 | 4_4:-2603277 | None:intergenic |
| GTTTATGTGGTAAGGAAGAG+AGG | 0.500469 | 4_4:-2601985 | None:intergenic |
| TTTCCACTACAGTAATGCTT+AGG | 0.503251 | 4_4:-2604334 | None:intergenic |
| ACTAAGTTTATCTGATGTGT+TGG | 0.503513 | 4_4:+2604165 | Msa0663710:CDS |
| CCACTACAGTAATGCTTAGG+AGG | 0.503948 | 4_4:-2604331 | None:intergenic |
| AAGTTAACAATGATTACAAC+AGG | 0.504914 | 4_4:-2602109 | None:intergenic |
| TAATGGTTTAGGAAACCAAA+TGG | 0.508879 | 4_4:+2603295 | Msa0663710:CDS |
| AGATTCATAATTGCTTCTTG+TGG | 0.518248 | 4_4:-2603869 | None:intergenic |
| ATTACAAATGTCACAACCAA+TGG | 0.518815 | 4_4:+2602220 | Msa0663710:CDS |
| TATATTGAGAAGAGTTTATG+TGG | 0.521197 | 4_4:-2601998 | None:intergenic |
| ATAAGCATAATATGAAAGCT+TGG | 0.522629 | 4_4:+2604128 | Msa0663710:CDS |
| ATGATGCCTCATGCATAAGC+AGG | 0.525420 | 4_4:+2603072 | Msa0663710:CDS |
| TGGTTTCCTAAACCATTAGC+CGG | 0.528205 | 4_4:-2603290 | None:intergenic |
| AAATTTCTATCAAGCACACT+TGG | 0.531776 | 4_4:+2603790 | Msa0663710:CDS |
| AGTCTCCACGCTTCATTCGA+AGG | 0.532757 | 4_4:-2603761 | None:intergenic |
| GAGAACTCTCTTTCACAAGC+TGG | 0.535540 | 4_4:-2604286 | None:intergenic |
| ATTATCTTGTATAGAAGCCA+TGG | 0.536564 | 4_4:-2604244 | None:intergenic |
| ATTTCTCAGGTAAATTTGGT+CGG | 0.541767 | 4_4:-2603562 | None:intergenic |
| GGAAATCCTTCAAGTCACTA+AGG | 0.543070 | 4_4:+2602025 | Msa0663710:five_prime_UTR |
| TGTGAGCAAATTAATTAGAG+AGG | 0.551823 | 4_4:-2601925 | None:intergenic |
| GTCTCCACGCTTCATTCGAA+GGG | 0.553860 | 4_4:-2603760 | None:intergenic |
| CCTCCTAAGCATTACTGTAG+TGG | 0.554289 | 4_4:+2604331 | Msa0663710:CDS |
| TGGATCGGAGTATGTAGAGT+TGG | 0.556752 | 4_4:-2603002 | None:intergenic |
| CTTCTTCTTTCATTTACATG+AGG | 0.557175 | 4_4:+2604374 | Msa0663710:CDS |
| AATAGTTAGAGATGTTTCAT+GGG | 0.557252 | 4_4:+2604442 | Msa0663710:exon |
| AGGAAACCAAATGGTTAGCA+TGG | 0.559741 | 4_4:+2603304 | Msa0663710:CDS |
| AATCTTTGTTGAAAAGGAGA+CGG | 0.561894 | 4_4:+2603706 | Msa0663710:CDS |
| CGAGCATAACACGGTTTGTG+AGG | 0.563260 | 4_4:-2603349 | None:intergenic |
| CAAGTCACTAAGGATAGGAT+AGG | 0.570232 | 4_4:+2602035 | Msa0663710:five_prime_UTR |
| TGAGGACTTTACAAAAGGCA+AGG | 0.572789 | 4_4:+2602162 | Msa0663710:CDS |
| ATATCAAAGTTTGATAGAGA+AGG | 0.577197 | 4_4:+2603478 | Msa0663710:CDS |
| CTTTAATAATACTATGTCAA+AGG | 0.586367 | 4_4:+2602288 | Msa0663710:CDS |
| AGAGTTCATAAAATATCAGA+TGG | 0.593218 | 4_4:+2602247 | Msa0663710:CDS |
| TCCACGCTTCATTCGAAGGG+TGG | 0.594457 | 4_4:-2603757 | None:intergenic |
| AAAGGTGTCATGAAAAGAGA+AGG | 0.597269 | 4_4:-2603662 | None:intergenic |
| AAGGTGTGGACCTAATGGTA+AGG | 0.597661 | 4_4:+2603184 | Msa0663710:CDS |
| ATAGAAGTTTATCAAGCAAG+TGG | 0.597808 | 4_4:+2604079 | Msa0663710:CDS |
| TCTGATTGCAAAATTAACAA+AGG | 0.600847 | 4_4:-2603626 | None:intergenic |
| ATCACTAACCAGCTTTACAC+CGG | 0.600952 | 4_4:-2604416 | None:intergenic |
| CTGTAACCTGCTTATGCATG+AGG | 0.612021 | 4_4:-2603078 | None:intergenic |
| ACAAATGTCACAACCAATGG+AGG | 0.621737 | 4_4:+2602223 | Msa0663710:CDS |
| AAGTTACTACCAAAAGTACT+TGG | 0.622114 | 4_4:+2603917 | Msa0663710:CDS |
| TGTCAAATTCAAGGTGCAGG+AGG | 0.625916 | 4_4:+2602768 | Msa0663710:intron |
| TCCTTCAAGTCACTAAGGAT+AGG | 0.627501 | 4_4:+2602030 | Msa0663710:five_prime_UTR |
| TTAGGAGGAGCATGATAACA+TGG | 0.627761 | 4_4:-2604316 | None:intergenic |
| TCCACCCTTCGAATGAAGCG+TGG | 0.629725 | 4_4:+2603756 | Msa0663710:CDS |
| AGATTGAGAAATAATGATGA+TGG | 0.636757 | 4_4:-2603533 | None:intergenic |
| TTGTGAAAGAGAGTTCTCAA+TGG | 0.648650 | 4_4:+2604291 | Msa0663710:CDS |
| GAATAAATCAACTTCTTCAG+GGG | 0.654370 | 4_4:+2604051 | Msa0663710:CDS |
| CAAATACCTTATCTGGACAC+CGG | 0.660945 | 4_4:+2603271 | Msa0663710:CDS |
| TGAATCTTACGAGCATAACA+CGG | 0.663017 | 4_4:-2603358 | None:intergenic |
| AGATTCAGGAAAGACAAACA+AGG | 0.727705 | 4_4:+2603374 | Msa0663710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAACAATATATATATGTA+AGG | + | chr4_4:2602364-2602383 | Msa0663710:intron | 10.0% |
| !! | TTTGTCAAAAATAATAAATT+TGG | - | chr4_4:2602570-2602589 | None:intergenic | 10.0% |
| !!! | ACAATTTGATAATTTTTAAT+TGG | - | chr4_4:2602631-2602650 | None:intergenic | 10.0% |
| !!! | ATGATTAGTATAATAATTTT+TGG | + | chr4_4:2602912-2602931 | Msa0663710:intron | 10.0% |
| !!! | TGATTAGTATAATAATTTTT+GGG | + | chr4_4:2602913-2602932 | Msa0663710:intron | 10.0% |
| !!! | TGAAATAAGACATTTTTTTT+GGG | - | chr4_4:2602405-2602424 | None:intergenic | 15.0% |
| !!! | ATGAAATAAGACATTTTTTT+TGG | - | chr4_4:2602406-2602425 | None:intergenic | 15.0% |
| !!! | TATAAATTCTAAGAACATTA+AGG | + | chr4_4:2603232-2603251 | Msa0663710:CDS | 15.0% |
| !!! | ATAAATTCTAAGAACATTAA+GGG | + | chr4_4:2603233-2603252 | Msa0663710:CDS | 15.0% |
| !! | CTTTAATAATACTATGTCAA+AGG | + | chr4_4:2602288-2602307 | Msa0663710:CDS | 20.0% |
| !!! | GAAATAAGACATTTTTTTTG+GGG | - | chr4_4:2602404-2602423 | None:intergenic | 20.0% |
| !!! | ACAACTTTTAATTACTCTAT+GGG | - | chr4_4:2602661-2602680 | None:intergenic | 20.0% |
| !!! | TACAACTTTTAATTACTCTA+TGG | - | chr4_4:2602662-2602681 | None:intergenic | 20.0% |
| !! | TTCGATATTAAATATGAAGA+AGG | - | chr4_4:2603137-2603156 | None:intergenic | 20.0% |
| !! | ACTATGAAAAAATTCATAGA+AGG | + | chr4_4:2603165-2603184 | Msa0663710:CDS | 20.0% |
| !! | AGCTAACAATAATTCAAAAT+TGG | + | chr4_4:2603505-2603524 | Msa0663710:CDS | 20.0% |
| !! | AAAAATTTCTCAGGTAAATT+TGG | - | chr4_4:2603569-2603588 | None:intergenic | 20.0% |
| !! | TGAAAAAATCTTTGTTGAAA+AGG | + | chr4_4:2603700-2603719 | Msa0663710:CDS | 20.0% |
| !!! | TTATCTTTTAGTTAGTTTCT+TGG | + | chr4_4:2604473-2604492 | Msa0663710:three_prime_UTR | 20.0% |
| !!! | TATCTTTTAGTTAGTTTCTT+GGG | + | chr4_4:2604474-2604493 | Msa0663710:three_prime_UTR | 20.0% |
| ! | TATATTGAGAAGAGTTTATG+TGG | - | chr4_4:2602001-2602020 | None:intergenic | 25.0% |
| ! | AAACTCTTCTCAATATATCA+TGG | + | chr4_4:2602004-2602023 | Msa0663710:five_prime_UTR | 25.0% |
| ! | AAAGAATGTTGTAAATCTCT+TGG | - | chr4_4:2602068-2602087 | None:intergenic | 25.0% |
| ! | AAGTTAACAATGATTACAAC+AGG | - | chr4_4:2602112-2602131 | None:intergenic | 25.0% |
| ! | AGAGTTCATAAAATATCAGA+TGG | + | chr4_4:2602247-2602266 | Msa0663710:CDS | 25.0% |
| !! | ATTAAAGTCTCCTTTTATGT+TGG | - | chr4_4:2602275-2602294 | None:intergenic | 25.0% |
| !!! | ATATATTGTTTTACCAACTG+AGG | - | chr4_4:2602357-2602376 | None:intergenic | 25.0% |
| ! | ATATATATATGTAAGGTCCA+AGG | + | chr4_4:2602371-2602390 | Msa0663710:intron | 25.0% |
| ! | TATTAATGCTACAACAGATT+TGG | - | chr4_4:2602481-2602500 | None:intergenic | 25.0% |
| !!! | CAACTTTTAATTACTCTATG+GGG | - | chr4_4:2602660-2602679 | None:intergenic | 25.0% |
| ! | TAATGTACTTGTCAAATTCA+AGG | + | chr4_4:2602759-2602778 | Msa0663710:intron | 25.0% |
| !! | TTTTCTTTGTCATTATGGAT+CGG | - | chr4_4:2603020-2603039 | None:intergenic | 25.0% |
| !! | GCAATTTTTCTTTGTCATTA+TGG | - | chr4_4:2603025-2603044 | None:intergenic | 25.0% |
| ! | AAATATGAAGAAGGTTTATG+AGG | - | chr4_4:2603128-2603147 | None:intergenic | 25.0% |
| !! | TAATATTTGTCATGCTTTTG+TGG | - | chr4_4:2603214-2603233 | None:intergenic | 25.0% |
| !! | AACCAAGTTGAATTCAAAAA+CGG | - | chr4_4:2603413-2603432 | None:intergenic | 25.0% |
| !! | ACATGATTTTCATTCCAAAA+AGG | - | chr4_4:2603452-2603471 | None:intergenic | 25.0% |
| ! | ATATCAAAGTTTGATAGAGA+AGG | + | chr4_4:2603478-2603497 | Msa0663710:CDS | 25.0% |
| ! | AGATTGAGAAATAATGATGA+TGG | - | chr4_4:2603536-2603555 | None:intergenic | 25.0% |
| ! | TCTGATTGCAAAATTAACAA+AGG | - | chr4_4:2603629-2603648 | None:intergenic | 25.0% |
| ! | TTTAAATTATCACCGTATTC+TGG | - | chr4_4:2604019-2604038 | None:intergenic | 25.0% |
| ! | ATAAGCATAATATGAAAGCT+TGG | + | chr4_4:2604128-2604147 | Msa0663710:CDS | 25.0% |
| ! | TAAGCATAATATGAAAGCTT+GGG | + | chr4_4:2604129-2604148 | Msa0663710:CDS | 25.0% |
| !! | GAAGAAGCAAAATCTTTTAT+TGG | - | chr4_4:2604361-2604380 | None:intergenic | 25.0% |
| ! | AAATAGTTAGAGATGTTTCA+TGG | + | chr4_4:2604441-2604460 | Msa0663710:exon | 25.0% |
| ! | AATAGTTAGAGATGTTTCAT+GGG | + | chr4_4:2604442-2604461 | Msa0663710:exon | 25.0% |
| TGTGAGCAAATTAATTAGAG+AGG | - | chr4_4:2601928-2601947 | None:intergenic | 30.0% | |
| ATTACAAATGTCACAACCAA+TGG | + | chr4_4:2602220-2602239 | Msa0663710:CDS | 30.0% | |
| !! | AATCAGTTTTGTGCTATGAT+TGG | - | chr4_4:2602454-2602473 | None:intergenic | 30.0% |
| GACAAAGAAAAATTGCTTGA+TGG | + | chr4_4:2603029-2603048 | Msa0663710:CDS | 30.0% | |
| GAAAAAATTCATAGAAGGTG+TGG | + | chr4_4:2603170-2603189 | Msa0663710:CDS | 30.0% | |
| TAATGGTTTAGGAAACCAAA+TGG | + | chr4_4:2603295-2603314 | Msa0663710:CDS | 30.0% | |
| ATTTCTCAGGTAAATTTGGT+CGG | - | chr4_4:2603565-2603584 | None:intergenic | 30.0% | |
| TCACAGTGAAAAAATTTCTC+AGG | - | chr4_4:2603578-2603597 | None:intergenic | 30.0% | |
| AATCTTTGTTGAAAAGGAGA+CGG | + | chr4_4:2603706-2603725 | Msa0663710:CDS | 30.0% | |
| AAATTTCTATCAAGCACACT+TGG | + | chr4_4:2603790-2603809 | Msa0663710:CDS | 30.0% | |
| ! | GATTGAACACTCTTATTTGA+AGG | - | chr4_4:2603838-2603857 | None:intergenic | 30.0% |
| AGATTCATAATTGCTTCTTG+TGG | - | chr4_4:2603872-2603891 | None:intergenic | 30.0% | |
| TGGTAGTAACTTATTGTGAA+TGG | - | chr4_4:2603909-2603928 | None:intergenic | 30.0% | |
| !! | AAGTTACTACCAAAAGTACT+TGG | + | chr4_4:2603917-2603936 | Msa0663710:CDS | 30.0% |
| ! | TCTTTCATACCAAGTACTTT+TGG | - | chr4_4:2603929-2603948 | None:intergenic | 30.0% |
| ACGAATAAATCAACTTCTTC+AGG | + | chr4_4:2604049-2604068 | Msa0663710:CDS | 30.0% | |
| CGAATAAATCAACTTCTTCA+GGG | + | chr4_4:2604050-2604069 | Msa0663710:CDS | 30.0% | |
| GAATAAATCAACTTCTTCAG+GGG | + | chr4_4:2604051-2604070 | Msa0663710:CDS | 30.0% | |
| ATAGAAGTTTATCAAGCAAG+TGG | + | chr4_4:2604079-2604098 | Msa0663710:CDS | 30.0% | |
| ACTAAGTTTATCTGATGTGT+TGG | + | chr4_4:2604165-2604184 | Msa0663710:CDS | 30.0% | |
| ! | ACTACTTCTTTGTCTACTTT+TGG | + | chr4_4:2604190-2604209 | Msa0663710:CDS | 30.0% |
| ATTATCTTGTATAGAAGCCA+TGG | - | chr4_4:2604247-2604266 | None:intergenic | 30.0% | |
| CTTCTTCTTTCATTTACATG+AGG | + | chr4_4:2604374-2604393 | Msa0663710:CDS | 30.0% | |
| CATTTACATGAGGAAATGTA+AGG | + | chr4_4:2604384-2604403 | Msa0663710:CDS | 30.0% | |
| ! | TGAGGAAATGTAAGGATTTT+TGG | + | chr4_4:2604392-2604411 | Msa0663710:CDS | 30.0% |
| !!! | AAATGTAAGGATTTTTGGTC+CGG | + | chr4_4:2604397-2604416 | Msa0663710:CDS | 30.0% |
| TGAGAAGAGTTTATGTGGTA+AGG | - | chr4_4:2601996-2602015 | None:intergenic | 35.0% | |
| ! | CTCTTTGAGGACTTTACAAA+AGG | + | chr4_4:2602157-2602176 | Msa0663710:CDS | 35.0% |
| TTTATGAACTCTTCCTCCAT+TGG | - | chr4_4:2602239-2602258 | None:intergenic | 35.0% | |
| TCTATCTCTCTCAAATCTAC+AGG | + | chr4_4:2602942-2602961 | Msa0663710:intron | 35.0% | |
| ATGTAGAGTTGGATCATTTG+TGG | - | chr4_4:2602994-2603013 | None:intergenic | 35.0% | |
| TTGTGGTAATCCTTACCATT+AGG | - | chr4_4:2603197-2603216 | None:intergenic | 35.0% | |
| CAAAGTGCAAATACCTTATC+TGG | + | chr4_4:2603264-2603283 | Msa0663710:CDS | 35.0% | |
| TGAATCTTACGAGCATAACA+CGG | - | chr4_4:2603361-2603380 | None:intergenic | 35.0% | |
| AGATTCAGGAAAGACAAACA+AGG | + | chr4_4:2603374-2603393 | Msa0663710:CDS | 35.0% | |
| !!! | AGCCGTTTTTGAATTCAACT+TGG | + | chr4_4:2603408-2603427 | Msa0663710:CDS | 35.0% |
| ! | TACCAGAAAAGTCTCCTTTT+TGG | + | chr4_4:2603435-2603454 | Msa0663710:CDS | 35.0% |
| ! | TTCCAAAAAGGAGACTTTTC+TGG | - | chr4_4:2603440-2603459 | None:intergenic | 35.0% |
| !! | AAAGGTGTCATGAAAAGAGA+AGG | - | chr4_4:2603665-2603684 | None:intergenic | 35.0% |
| GCTAAAGCAGATGAGAAAAT+AGG | + | chr4_4:2603812-2603831 | Msa0663710:CDS | 35.0% | |
| CAAAAACAAAGCGATTGTGA+AGG | + | chr4_4:2603970-2603989 | Msa0663710:CDS | 35.0% | |
| GCGTCTTTATATCCAGAATA+CGG | + | chr4_4:2604004-2604023 | Msa0663710:CDS | 35.0% | |
| ! | ACTTTTGGATATGTTGCTCA+AGG | + | chr4_4:2604205-2604224 | Msa0663710:CDS | 35.0% |
| TTGTGAAAGAGAGTTCTCAA+TGG | + | chr4_4:2604291-2604310 | Msa0663710:CDS | 35.0% | |
| TTTCCACTACAGTAATGCTT+AGG | - | chr4_4:2604337-2604356 | None:intergenic | 35.0% | |
| GTTTATGTGGTAAGGAAGAG+AGG | - | chr4_4:2601988-2602007 | None:intergenic | 40.0% | |
| GGAAATCCTTCAAGTCACTA+AGG | + | chr4_4:2602025-2602044 | Msa0663710:five_prime_UTR | 40.0% | |
| TCCTTCAAGTCACTAAGGAT+AGG | + | chr4_4:2602030-2602049 | Msa0663710:five_prime_UTR | 40.0% | |
| TCCTATCCTTAGTGACTTGA+AGG | - | chr4_4:2602034-2602053 | None:intergenic | 40.0% | |
| CAAGTCACTAAGGATAGGAT+AGG | + | chr4_4:2602035-2602054 | Msa0663710:five_prime_UTR | 40.0% | |
| TGAGGACTTTACAAAAGGCA+AGG | + | chr4_4:2602162-2602181 | Msa0663710:CDS | 40.0% | |
| ! | AAAGGCAAGGTACTACTTGT+TGG | + | chr4_4:2602175-2602194 | Msa0663710:CDS | 40.0% |
| ACAAATGTCACAACCAATGG+AGG | + | chr4_4:2602223-2602242 | Msa0663710:CDS | 40.0% | |
| ! | TCAGATGGTGCCAACATAAA+AGG | + | chr4_4:2602262-2602281 | Msa0663710:CDS | 40.0% |
| !!! | TTTTTTGGGGCTTTGAACCT+TGG | - | chr4_4:2602391-2602410 | None:intergenic | 40.0% |
| ACTTGTCAAATTCAAGGTGC+AGG | + | chr4_4:2602765-2602784 | Msa0663710:intron | 40.0% | |
| TACAAACCTGTTGTTGTAGC+TGG | - | chr4_4:2602829-2602848 | None:intergenic | 40.0% | |
| CAAATACCTTATCTGGACAC+CGG | + | chr4_4:2603271-2603290 | Msa0663710:CDS | 40.0% | |
| TGGTTTCCTAAACCATTAGC+CGG | - | chr4_4:2603293-2603312 | None:intergenic | 40.0% | |
| AGGAAACCAAATGGTTAGCA+TGG | + | chr4_4:2603304-2603323 | Msa0663710:CDS | 40.0% | |
| GTGTTATGCTCGTAAGATTC+AGG | + | chr4_4:2603360-2603379 | Msa0663710:CDS | 40.0% | |
| !!! | CATGACACCTTTTTTCAGCA+AGG | + | chr4_4:2603673-2603692 | Msa0663710:CDS | 40.0% |
| TCAAGCTCCTTGCTGAAAAA+AGG | - | chr4_4:2603683-2603702 | None:intergenic | 40.0% | |
| ! | GAGACGGTTTTTCACCATTT+AGG | + | chr4_4:2603722-2603741 | Msa0663710:CDS | 40.0% |
| GCTTCTTGTGGAGTTAAAGT+AGG | - | chr4_4:2603860-2603879 | None:intergenic | 40.0% | |
| ! | TTAGGAGGAGCATGATAACA+TGG | - | chr4_4:2604319-2604338 | None:intergenic | 40.0% |
| ATCACTAACCAGCTTTACAC+CGG | - | chr4_4:2604419-2604438 | None:intergenic | 40.0% | |
| CACAAGCTTCTCTCTCTTTG+AGG | + | chr4_4:2602144-2602163 | Msa0663710:CDS | 45.0% | |
| TGTCAAATTCAAGGTGCAGG+AGG | + | chr4_4:2602768-2602787 | Msa0663710:intron | 45.0% | |
| GAAAGACCAGCTACAACAAC+AGG | + | chr4_4:2602820-2602839 | Msa0663710:CDS | 45.0% | |
| TGGATCGGAGTATGTAGAGT+TGG | - | chr4_4:2603005-2603024 | None:intergenic | 45.0% | |
| ATGATGCCTCATGCATAAGC+AGG | + | chr4_4:2603072-2603091 | Msa0663710:CDS | 45.0% | |
| CTGTAACCTGCTTATGCATG+AGG | - | chr4_4:2603081-2603100 | None:intergenic | 45.0% | |
| ! | CATAGAAGGTGTGGACCTAA+TGG | + | chr4_4:2603179-2603198 | Msa0663710:CDS | 45.0% |
| AAGGTGTGGACCTAATGGTA+AGG | + | chr4_4:2603184-2603203 | Msa0663710:CDS | 45.0% | |
| TTGCAGCCATGCTAACCATT+TGG | - | chr4_4:2603313-2603332 | None:intergenic | 45.0% | |
| GGAAAAGGTAGCGTCCTAAA+TGG | - | chr4_4:2603739-2603758 | None:intergenic | 45.0% | |
| CTTCATTCGAAGGGTGGAAA+AGG | - | chr4_4:2603754-2603773 | None:intergenic | 45.0% | |
| TGGATATGTTGCTCAAGGCT+TGG | + | chr4_4:2604210-2604229 | Msa0663710:CDS | 45.0% | |
| GGATATGTTGCTCAAGGCTT+GGG | + | chr4_4:2604211-2604230 | Msa0663710:CDS | 45.0% | |
| CTCAAGGCTTGGGAAATTTG+AGG | + | chr4_4:2604221-2604240 | Msa0663710:CDS | 45.0% | |
| GAGAACTCTCTTTCACAAGC+TGG | - | chr4_4:2604289-2604308 | None:intergenic | 45.0% | |
| CCACTACAGTAATGCTTAGG+AGG | - | chr4_4:2604334-2604353 | None:intergenic | 45.0% | |
| CCTCCTAAGCATTACTGTAG+TGG | + | chr4_4:2604331-2604350 | Msa0663710:CDS | 45.0% | |
| !! | TTTTTGGTCCGGTGTAAAGC+TGG | + | chr4_4:2604408-2604427 | Msa0663710:CDS | 45.0% |
| TCTCGTGAGCTTACCTCAGT+TGG | + | chr4_4:2602341-2602360 | Msa0663710:intron | 50.0% | |
| CATTAGCCGGTGTCCAGATA+AGG | - | chr4_4:2603280-2603299 | None:intergenic | 50.0% | |
| ! | CTTATCTGGACACCGGCTAA+TGG | + | chr4_4:2603278-2603297 | Msa0663710:CDS | 50.0% |
| ! | TGGACACCGGCTAATGGTTT+AGG | + | chr4_4:2603284-2603303 | Msa0663710:CDS | 50.0% |
| CGAGCATAACACGGTTTGTG+AGG | - | chr4_4:2603352-2603371 | None:intergenic | 50.0% | |
| GTCTCCACGCTTCATTCGAA+GGG | - | chr4_4:2603763-2603782 | None:intergenic | 50.0% | |
| AGTCTCCACGCTTCATTCGA+AGG | - | chr4_4:2603764-2603783 | None:intergenic | 50.0% | |
| ! | GCTTGGGAAATTTGAGGCCA+TGG | + | chr4_4:2604227-2604246 | Msa0663710:CDS | 50.0% |
| TCCACCCTTCGAATGAAGCG+TGG | + | chr4_4:2603756-2603775 | Msa0663710:CDS | 55.0% | |
| TCCACGCTTCATTCGAAGGG+TGG | - | chr4_4:2603760-2603779 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 2601917 | 2604502 | 2601917 | ID=Msa0663710;Name=Msa0663710 |
| chr4_4 | mRNA | 2601917 | 2604502 | 2601917 | ID=Msa0663710-mRNA-1;Parent=Msa0663710;Name=Msa0663710-mRNA-1;_AED=0.25;_eAED=0.25;_QI=216|1|1|1|0.5|1|3|52|574 |
| chr4_4 | exon | 2601917 | 2602309 | 2601917 | ID=Msa0663710-mRNA-1:exon:761;Parent=Msa0663710-mRNA-1 |
| chr4_4 | exon | 2602781 | 2602841 | 2602781 | ID=Msa0663710-mRNA-1:exon:762;Parent=Msa0663710-mRNA-1 |
| chr4_4 | exon | 2602964 | 2604502 | 2602964 | ID=Msa0663710-mRNA-1:exon:763;Parent=Msa0663710-mRNA-1 |
| chr4_4 | five_prime_UTR | 2601917 | 2602132 | 2601917 | ID=Msa0663710-mRNA-1:five_prime_utr;Parent=Msa0663710-mRNA-1 |
| chr4_4 | CDS | 2602133 | 2602309 | 2602133 | ID=Msa0663710-mRNA-1:cds;Parent=Msa0663710-mRNA-1 |
| chr4_4 | CDS | 2602781 | 2602841 | 2602781 | ID=Msa0663710-mRNA-1:cds;Parent=Msa0663710-mRNA-1 |
| chr4_4 | CDS | 2602964 | 2604450 | 2602964 | ID=Msa0663710-mRNA-1:cds;Parent=Msa0663710-mRNA-1 |
| chr4_4 | three_prime_UTR | 2604451 | 2604502 | 2604451 | ID=Msa0663710-mRNA-1:three_prime_utr;Parent=Msa0663710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
