Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408110 | AFK35117.1 | 87.629 | 97 | 4 | 2 | 8 | 97 | 344 | 439 | 1.33e-49 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408110 | sp|Q0WUY1|NADKC_ARATH | 70.130 | 77 | 16 | 1 | 28 | 97 | 377 | 453 | 7.95e-30 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408110 | I3S4C5 | 87.629 | 97 | 4 | 2 | 8 | 97 | 344 | 439 | 6.33e-50 | 176 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0408110 | 0.804393 | 2.207740e-49 | -8.615850e-47 |
| Msa0017510 | Msa0408110 | 0.807654 | 4.548579e-50 | -8.615850e-47 |
| Msa0116770 | Msa0408110 | 0.826222 | 3.053771e-54 | -8.615850e-47 |
| Msa0157290 | Msa0408110 | 0.807576 | 4.725828e-50 | -8.615850e-47 |
| Msa0158480 | Msa0408110 | 0.804907 | 1.723830e-49 | -8.615850e-47 |
| Msa0165210 | Msa0408110 | 0.827059 | 1.928550e-54 | -8.615850e-47 |
| Msa0165220 | Msa0408110 | 0.812914 | 3.335547e-51 | -8.615850e-47 |
| Msa0175740 | Msa0408110 | 0.809637 | 1.714741e-50 | -8.615850e-47 |
| Msa0215320 | Msa0408110 | -0.811194 | 7.910770e-51 | -8.615850e-47 |
| Msa0220740 | Msa0408110 | 0.812661 | 3.789719e-51 | -8.615850e-47 |
| Msa0223260 | Msa0408110 | 0.815053 | 1.125808e-51 | -8.615850e-47 |
| Msa0233300 | Msa0408110 | 0.822956 | 1.794634e-53 | -8.615850e-47 |
| Msa0384890 | Msa0408110 | 0.802594 | 5.210431e-49 | -8.615850e-47 |
| Msa0401310 | Msa0408110 | 0.894101 | 3.384159e-75 | -8.615850e-47 |
| Msa0402290 | Msa0408110 | 0.819375 | 1.200307e-52 | -8.615850e-47 |
| Msa0406880 | Msa0408110 | 0.809654 | 1.700453e-50 | -8.615850e-47 |
| Msa0408110 | Msa0414230 | 0.804892 | 1.736770e-49 | -8.615850e-47 |
| Msa0408110 | Msa0417100 | 0.804645 | 1.956024e-49 | -8.615850e-47 |
| Msa0408110 | Msa0424320 | 0.822676 | 2.085240e-53 | -8.615850e-47 |
| Msa0408110 | Msa0430420 | 0.815516 | 8.883920e-52 | -8.615850e-47 |
| Msa0408110 | Msa0479340 | 0.812989 | 3.210848e-51 | -8.615850e-47 |
| Msa0408110 | Msa0484780 | 0.811672 | 6.226985e-51 | -8.615850e-47 |
| Msa0408110 | Msa0523940 | 0.818348 | 2.054069e-52 | -8.615850e-47 |
| Msa0408110 | Msa0562440 | 0.813437 | 2.560487e-51 | -8.615850e-47 |
| Msa0408110 | Msa0657970 | 0.809940 | 1.476067e-50 | -8.615850e-47 |
| Msa0408110 | Msa0688270 | 0.800345 | 1.505586e-48 | -8.615850e-47 |
| Msa0408110 | Msa0697060 | 0.801009 | 1.102176e-48 | -8.615850e-47 |
| Msa0408110 | Msa0701010 | 0.826379 | 2.802372e-54 | -8.615850e-47 |
| Msa0408110 | Msa0731550 | 0.842506 | 2.480437e-58 | -8.615850e-47 |
| Msa0408110 | Msa0731940 | 0.807218 | 5.627681e-50 | -8.615850e-47 |
| Msa0408110 | Msa0735170 | 0.812791 | 3.549387e-51 | -8.615850e-47 |
| Msa0408110 | Msa0766630 | 0.842971 | 1.866342e-58 | -8.615850e-47 |
| Msa0408110 | Msa0768370 | 0.811053 | 8.483718e-51 | -8.615850e-47 |
| Msa0408110 | Msa0820850 | 0.807743 | 4.355434e-50 | -8.615850e-47 |
| Msa0408110 | Msa0842650 | 0.801260 | 9.794329e-49 | -8.615850e-47 |
| Msa0408110 | Msa0861130 | 0.806911 | 6.536168e-50 | -8.615850e-47 |
| Msa0408110 | Msa0877250 | 0.820894 | 5.388457e-53 | -8.615850e-47 |
| Msa0408110 | Msa0880140 | 0.803922 | 2.765641e-49 | -8.615850e-47 |
| Msa0408110 | Msa0885280 | 0.803680 | 3.105207e-49 | -8.615850e-47 |
| Msa0408110 | Msa0899450 | 0.810411 | 1.168339e-50 | -8.615850e-47 |
| Msa0408110 | Msa0907070 | 0.818657 | 1.748739e-52 | -8.615850e-47 |
| Msa0408110 | Msa0907260 | 0.820578 | 6.370537e-53 | -8.615850e-47 |
| Msa0408110 | Msa0918700 | 0.869859 | 2.256853e-66 | -8.615850e-47 |
| Msa0408110 | Msa0927380 | 0.808260 | 3.380426e-50 | -8.615850e-47 |
| Msa0408110 | Msa0933100 | 0.800052 | 1.727124e-48 | -8.615850e-47 |
| Msa0408110 | Msa0954910 | 0.828722 | 7.674929e-55 | -8.615850e-47 |
| Msa0408110 | Msa0956270 | 0.806030 | 1.002796e-49 | -8.615850e-47 |
| Msa0408110 | Msa0964900 | 0.813556 | 2.411352e-51 | -8.615850e-47 |
| Msa0408110 | Msa0969520 | 0.800142 | 1.655931e-48 | -8.615850e-47 |
| Msa0408110 | Msa0975220 | 0.821694 | 3.523882e-53 | -8.615850e-47 |
| Msa0408110 | Msa0983090 | 0.877226 | 7.448281e-69 | -8.615850e-47 |
| Msa0408110 | Msa0991080 | 0.869177 | 3.763496e-66 | -8.615850e-47 |
| Msa0408110 | Msa1000900 | 0.813142 | 2.972885e-51 | -8.615850e-47 |
| Msa0408110 | Msa1014540 | 0.846065 | 2.744441e-59 | -8.615850e-47 |
| Msa0408110 | Msa1059570 | 0.800737 | 1.252710e-48 | -8.615850e-47 |
| Msa0408110 | Msa1075220 | -0.823568 | 1.291285e-53 | -8.615850e-47 |
| Msa0408110 | Msa1075650 | 0.807159 | 5.792317e-50 | -8.615850e-47 |
| Msa0408110 | Msa1082500 | 0.822962 | 1.788866e-53 | -8.615850e-47 |
| Msa0408110 | Msa1121490 | 0.811875 | 5.625004e-51 | -8.615850e-47 |
| Msa0408110 | Msa1137690 | 0.820865 | 5.473276e-53 | -8.615850e-47 |
| Msa0408110 | Msa1139000 | -0.804742 | 1.866341e-49 | -8.615850e-47 |
| Msa0408110 | Msa1156020 | 0.810498 | 1.118973e-50 | -8.615850e-47 |
| Msa0408110 | Msa1162550 | -0.824865 | 6.403140e-54 | -8.615850e-47 |
| Msa0408110 | Msa1174040 | 0.806256 | 8.984832e-50 | -8.615850e-47 |
| Msa0408110 | Msa1233890 | 0.806768 | 7.005700e-50 | -8.615850e-47 |
| Msa0408110 | Msa1244250 | 0.825717 | 4.024787e-54 | -8.615850e-47 |
| Msa0408110 | Msa1249490 | 0.800099 | 1.689417e-48 | -8.615850e-47 |
| Msa0408110 | Msa1273920 | 0.886056 | 4.764158e-72 | -8.615850e-47 |
| Msa0408110 | Msa1277660 | 0.807208 | 5.654179e-50 | -8.615850e-47 |
| Msa0408110 | Msa1284680 | 0.866452 | 2.822405e-65 | -8.615850e-47 |
| Msa0408110 | Msa1397860 | 0.801315 | 9.539716e-49 | -8.615850e-47 |
| Msa0408110 | Msa1411020 | 0.801734 | 7.831120e-49 | -8.615850e-47 |
| Msa0408110 | Msa1434350 | 0.800229 | 1.589671e-48 | -8.615850e-47 |
| Msa0408110 | Msa1439320 | 0.801546 | 8.555108e-49 | -8.615850e-47 |
| Msa0408110 | Msa1450760 | 0.803932 | 2.753166e-49 | -8.615850e-47 |
| Msa0408110 | Msa1451620 | -0.809586 | 1.758864e-50 | -8.615850e-47 |
| Msa0408110 | Msa1466540 | 0.820570 | 6.395929e-53 | -8.615850e-47 |
| Msa0270520 | Msa0408110 | 0.803285 | 3.750394e-49 | -8.615850e-47 |
| Msa0288100 | Msa0408110 | 0.815575 | 8.619718e-52 | -8.615850e-47 |
| Msa0350990 | Msa0408110 | 0.813491 | 2.491372e-51 | -8.615850e-47 |
| Msa0351030 | Msa0408110 | 0.815894 | 7.315833e-52 | -8.615850e-47 |
| Msa0355220 | Msa0408110 | 0.814212 | 1.728761e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408110 | MtrunA17_Chr1g0187021 | 87.629 | 97 | 4 | 2 | 8 | 97 | 344 | 439 | 2.13e-53 | 177 |
| Msa0408110 | MtrunA17_Chr1g0187071 | 69.000 | 100 | 23 | 2 | 5 | 97 | 340 | 438 | 1.21e-38 | 137 |
| Msa0408110 | MtrunA17_Chr1g0187051 | 68.041 | 97 | 13 | 2 | 8 | 97 | 339 | 424 | 3.76e-37 | 133 |
| Msa0408110 | MtrunA17_Chr7g0260781 | 68.056 | 72 | 16 | 1 | 33 | 97 | 223 | 294 | 2.44e-27 | 105 |
| Msa0408110 | MtrunA17_Chr1g0184551 | 60.465 | 86 | 25 | 2 | 19 | 97 | 347 | 430 | 9.22e-27 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408110 | AT1G04280.2 | 70.130 | 77 | 16 | 1 | 28 | 97 | 323 | 399 | 4.59e-31 | 117 |
| Msa0408110 | AT1G04280.1 | 70.130 | 77 | 16 | 1 | 28 | 97 | 377 | 453 | 8.08e-31 | 117 |
| Msa0408110 | AT1G06750.3 | 57.000 | 100 | 29 | 3 | 5 | 97 | 339 | 431 | 5.56e-29 | 111 |
| Msa0408110 | AT1G06750.1 | 57.000 | 100 | 29 | 3 | 5 | 97 | 339 | 431 | 5.56e-29 | 111 |
| Msa0408110 | AT1G06750.2 | 57.000 | 100 | 29 | 3 | 5 | 97 | 346 | 438 | 6.07e-29 | 111 |
| Msa0408110 | AT2G30630.1 | 58.763 | 97 | 26 | 3 | 8 | 97 | 356 | 445 | 3.21e-28 | 109 |
| Msa0408110 | AT2G30630.2 | 58.763 | 97 | 26 | 3 | 8 | 97 | 377 | 466 | 3.36e-28 | 109 |
Find 32 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAAGTTTGCAATATTT+TGG | 0.119289 | 3_2:-47642259 | None:intergenic |
| CTTGTAGCTCTGCTTCTGTT+AGG | 0.288048 | 3_2:-47642963 | None:intergenic |
| CAAGAAGCACAGAGGTTTGA+TGG | 0.367851 | 3_2:+47644174 | Msa0408110:CDS |
| GCATTGGAAAATTTAAATTA+CGG | 0.395350 | 3_2:+47644205 | Msa0408110:CDS |
| GGATATCTTGCAGTTATTAG+AGG | 0.406489 | 3_2:+47642054 | Msa0408110:CDS |
| TTGCAGTTATTAGAGGCATT+AGG | 0.422529 | 3_2:+47642061 | Msa0408110:CDS |
| TTGTAGCTCTGCTTCTGTTA+GGG | 0.423721 | 3_2:-47642962 | None:intergenic |
| CAACAAGAGGAAAATTCTAC+AGG | 0.441415 | 3_2:+47641976 | Msa0408110:CDS |
| CTCTATTGCACAGATGTTGT+TGG | 0.456293 | 3_2:+47642292 | Msa0408110:CDS |
| CTCTATTGAATCTGCAGAAG+CGG | 0.490130 | 3_2:+47642932 | Msa0408110:CDS |
| CGCTTCTGCAGATTCAATAG+AGG | 0.492291 | 3_2:-47642931 | None:intergenic |
| GCAAACTTGTTGACAGTGCT+AGG | 0.509508 | 3_2:+47642269 | Msa0408110:CDS |
| CTAGTTGGTGTGGTTTGTGA+TGG | 0.513280 | 3_2:+47642033 | Msa0408110:CDS |
| CTATACAAAGCAAGTGAATG+AGG | 0.513355 | 3_2:+47641939 | Msa0408110:CDS |
| GGAAGAGAAGAGTCGTTAGC+TGG | 0.513519 | 3_2:+47643005 | Msa0408110:CDS |
| TTTGATGGGAATGGAAGCAT+TGG | 0.513634 | 3_2:+47644189 | Msa0408110:CDS |
| GCACAGAGGTTTGATGGGAA+TGG | 0.519634 | 3_2:+47644180 | Msa0408110:CDS |
| CCAACTAGCTCAATTCTGTA+AGG | 0.525410 | 3_2:-47642018 | None:intergenic |
| CCTTACAGAATTGAGCTAGT+TGG | 0.526663 | 3_2:+47642018 | Msa0408110:CDS |
| CAGAATTGAGCTAGTTGGTG+TGG | 0.527716 | 3_2:+47642023 | Msa0408110:CDS |
| TATTGCACAGATGTTGTTGG+TGG | 0.552652 | 3_2:+47642295 | Msa0408110:CDS |
| AAGAAGCACAGAGGTTTGAT+GGG | 0.558171 | 3_2:+47644175 | Msa0408110:CDS |
| TATGACATGAAGGGCAATGA+GGG | 0.569524 | 3_2:+47642192 | Msa0408110:intron |
| AGAAGAAGAACATCAACAAG+AGG | 0.597156 | 3_2:+47641963 | Msa0408110:CDS |
| AACAAGAGGAAAATTCTACA+GGG | 0.606029 | 3_2:+47641977 | Msa0408110:CDS |
| GTCGTTAGCTGGTAATGAAG+AGG | 0.608402 | 3_2:+47643016 | Msa0408110:CDS |
| TATACAAAGCAAGTGAATGA+GGG | 0.610525 | 3_2:+47641940 | Msa0408110:CDS |
| TGTTGTTGGTGGTCCACCAA+AGG | 0.618775 | 3_2:+47642306 | Msa0408110:CDS |
| AGTACTGCTTCAAGAAGTCG+AGG | 0.646449 | 3_2:+47642984 | Msa0408110:CDS |
| TTATGACATGAAGGGCAATG+AGG | 0.654349 | 3_2:+47642191 | Msa0408110:intron |
| GAAGTATTCAAGAAGCACAG+AGG | 0.696495 | 3_2:+47644166 | Msa0408110:CDS |
| ACAAGAGGAAAATTCTACAG+GGG | 0.709176 | 3_2:+47641978 | Msa0408110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTAAAATTTAAGATTA+GGG | - | chr3_2:47643720-47643739 | None:intergenic | 10.0% |
| !!! | TCTTTTTAAAATTTAAGATT+AGG | - | chr3_2:47643721-47643740 | None:intergenic | 10.0% |
| !!! | CTTTTTAAAATTTAAGATTA+GGG | - | chr3_2:47643720-47643739 | None:intergenic | 10.0% |
| !!! | TCTTTTTAAAATTTAAGATT+AGG | - | chr3_2:47643721-47643740 | None:intergenic | 10.0% |
| !! | TCTACTATATTAATATACTT+TGG | + | chr3_2:47642102-47642121 | Msa0408110:intron | 15.0% |
| !!! | TATAATTAACATTTTCCTTT+TGG | + | chr3_2:47642149-47642168 | Msa0408110:intron | 15.0% |
| !!! | CTTTTCATTATTGATTTATT+GGG | + | chr3_2:47642586-47642605 | Msa0408110:intron | 15.0% |
| !!! | TTTTCATTATTGATTTATTG+GGG | + | chr3_2:47642587-47642606 | Msa0408110:intron | 15.0% |
| !!! | AATGTAAAACATTTTGAATA+AGG | - | chr3_2:47642661-47642680 | None:intergenic | 15.0% |
| !! | ATAAATAAAAGAAAAGAACA+TGG | + | chr3_2:47643554-47643573 | Msa0408110:intron | 15.0% |
| !! | TCTACTATATTAATATACTT+TGG | + | chr3_2:47642102-47642121 | Msa0408110:intron | 15.0% |
| !!! | TATAATTAACATTTTCCTTT+TGG | + | chr3_2:47642149-47642168 | Msa0408110:intron | 15.0% |
| !!! | CTTTTCATTATTGATTTATT+GGG | + | chr3_2:47642586-47642605 | Msa0408110:intron | 15.0% |
| !!! | TTTTCATTATTGATTTATTG+GGG | + | chr3_2:47642587-47642606 | Msa0408110:intron | 15.0% |
| !!! | AATGTAAAACATTTTGAATA+AGG | - | chr3_2:47642661-47642680 | None:intergenic | 15.0% |
| !! | ATAAATAAAAGAAAAGAACA+TGG | + | chr3_2:47643554-47643573 | Msa0408110:intron | 15.0% |
| !! | ACTATATTAATATACTTTGG+TGG | + | chr3_2:47642105-47642124 | Msa0408110:intron | 20.0% |
| !!! | TTGTACATTTTTATTTCACA+TGG | + | chr3_2:47642483-47642502 | Msa0408110:intron | 20.0% |
| !! | CCAATAAATCAATAATGAAA+AGG | - | chr3_2:47642588-47642607 | None:intergenic | 20.0% |
| !!! | CCTTTTCATTATTGATTTAT+TGG | + | chr3_2:47642585-47642604 | Msa0408110:intron | 20.0% |
| !!! | TAAAACATTTTGAATAAGGT+TGG | - | chr3_2:47642657-47642676 | None:intergenic | 20.0% |
| !! | ATGACTAAAGTTATAAACTT+GGG | + | chr3_2:47642849-47642868 | Msa0408110:intron | 20.0% |
| !! | ATAGAGGTAAAATTATTCTA+TGG | - | chr3_2:47642918-47642937 | None:intergenic | 20.0% |
| !! | AACCGAAAACATAATATATA+TGG | + | chr3_2:47643093-47643112 | Msa0408110:intron | 20.0% |
| !!! | GTCCATATATATTATGTTTT+CGG | - | chr3_2:47643098-47643117 | None:intergenic | 20.0% |
| !!! | ATGATATTTTAATGCCAAAA+AGG | - | chr3_2:47643514-47643533 | None:intergenic | 20.0% |
| !!! | AAATAAGTTTTTACATCAGT+TGG | - | chr3_2:47643880-47643899 | None:intergenic | 20.0% |
| !! | GCATTGGAAAATTTAAATTA+CGG | + | chr3_2:47644205-47644224 | Msa0408110:CDS | 20.0% |
| !! | ACTATATTAATATACTTTGG+TGG | + | chr3_2:47642105-47642124 | Msa0408110:intron | 20.0% |
| !!! | TTGTACATTTTTATTTCACA+TGG | + | chr3_2:47642483-47642502 | Msa0408110:intron | 20.0% |
| !! | CCAATAAATCAATAATGAAA+AGG | - | chr3_2:47642588-47642607 | None:intergenic | 20.0% |
| !!! | CCTTTTCATTATTGATTTAT+TGG | + | chr3_2:47642585-47642604 | Msa0408110:intron | 20.0% |
| !!! | TAAAACATTTTGAATAAGGT+TGG | - | chr3_2:47642657-47642676 | None:intergenic | 20.0% |
| !! | ATGACTAAAGTTATAAACTT+GGG | + | chr3_2:47642849-47642868 | Msa0408110:intron | 20.0% |
| !! | ATAGAGGTAAAATTATTCTA+TGG | - | chr3_2:47642918-47642937 | None:intergenic | 20.0% |
| !! | AACCGAAAACATAATATATA+TGG | + | chr3_2:47643093-47643112 | Msa0408110:intron | 20.0% |
| !!! | GTCCATATATATTATGTTTT+CGG | - | chr3_2:47643098-47643117 | None:intergenic | 20.0% |
| !!! | ATGATATTTTAATGCCAAAA+AGG | - | chr3_2:47643514-47643533 | None:intergenic | 20.0% |
| !!! | AAATAAGTTTTTACATCAGT+TGG | - | chr3_2:47643880-47643899 | None:intergenic | 20.0% |
| !! | GCATTGGAAAATTTAAATTA+CGG | + | chr3_2:47644205-47644224 | Msa0408110:CDS | 20.0% |
| !!! | TTTCCTTTTGGAATTTTAAC+AGG | + | chr3_2:47642161-47642180 | Msa0408110:intron | 25.0% |
| !! | TCAACAAGTTTGCAATATTT+TGG | - | chr3_2:47642262-47642281 | None:intergenic | 25.0% |
| ! | GAATAATATCTTCTGACTTA+CGG | - | chr3_2:47642453-47642472 | None:intergenic | 25.0% |
| ! | AATGAAATATTTCTTTCCGA+AGG | + | chr3_2:47642821-47642840 | Msa0408110:intron | 25.0% |
| ! | GATGACTAAAGTTATAAACT+TGG | + | chr3_2:47642848-47642867 | Msa0408110:intron | 25.0% |
| ! | TCTGCTATGATTTAAATCAA+AGG | + | chr3_2:47643131-47643150 | Msa0408110:intron | 25.0% |
| ! | TTTACAACAATGATCATTGT+TGG | - | chr3_2:47643162-47643181 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGTATAGTTGTGA+GGG | + | chr3_2:47643450-47643469 | Msa0408110:intron | 25.0% |
| ! | ACAATTCCATCACAATATAA+AGG | - | chr3_2:47643967-47643986 | None:intergenic | 25.0% |
| !!! | TTTCCTTTTGGAATTTTAAC+AGG | + | chr3_2:47642161-47642180 | Msa0408110:intron | 25.0% |
| !! | TCAACAAGTTTGCAATATTT+TGG | - | chr3_2:47642262-47642281 | None:intergenic | 25.0% |
| ! | GAATAATATCTTCTGACTTA+CGG | - | chr3_2:47642453-47642472 | None:intergenic | 25.0% |
| ! | AATGAAATATTTCTTTCCGA+AGG | + | chr3_2:47642821-47642840 | Msa0408110:intron | 25.0% |
| ! | GATGACTAAAGTTATAAACT+TGG | + | chr3_2:47642848-47642867 | Msa0408110:intron | 25.0% |
| ! | TCTGCTATGATTTAAATCAA+AGG | + | chr3_2:47643131-47643150 | Msa0408110:intron | 25.0% |
| ! | TTTACAACAATGATCATTGT+TGG | - | chr3_2:47643162-47643181 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGTATAGTTGTGA+GGG | + | chr3_2:47643450-47643469 | Msa0408110:intron | 25.0% |
| ! | ACAATTCCATCACAATATAA+AGG | - | chr3_2:47643967-47643986 | None:intergenic | 25.0% |
| TATACAAAGCAAGTGAATGA+GGG | + | chr3_2:47641940-47641959 | Msa0408110:CDS | 30.0% | |
| AACAAGAGGAAAATTCTACA+GGG | + | chr3_2:47641977-47641996 | Msa0408110:CDS | 30.0% | |
| !!! | GGTGTGATTTTTTGTTATGA+TGG | + | chr3_2:47642126-47642145 | Msa0408110:intron | 30.0% |
| TCTCCTGTTAAAATTCCAAA+AGG | - | chr3_2:47642167-47642186 | None:intergenic | 30.0% | |
| ! | GTTTTGTCCTAAAATCGTTT+TGG | + | chr3_2:47642412-47642431 | Msa0408110:intron | 30.0% |
| CATTTGTTTGACAAGAACTT+TGG | - | chr3_2:47642521-47642540 | None:intergenic | 30.0% | |
| CTTATTAGCTCAGATATCAA+AGG | - | chr3_2:47642686-47642705 | None:intergenic | 30.0% | |
| ACTTTAGTCATCTATACCTT+CGG | - | chr3_2:47642840-47642859 | None:intergenic | 30.0% | |
| TGTAAACTTCATTGTAGTCT+TGG | + | chr3_2:47643176-47643195 | Msa0408110:intron | 30.0% | |
| GTAAACTTCATTGTAGTCTT+GGG | + | chr3_2:47643177-47643196 | Msa0408110:intron | 30.0% | |
| ATCTCATAAGCAACAAATCA+AGG | - | chr3_2:47643306-47643325 | None:intergenic | 30.0% | |
| !! | CTTTTGAAAGTATAGTTGTG+AGG | + | chr3_2:47643449-47643468 | Msa0408110:intron | 30.0% |
| !!! | TACCTTTTTAGCTTCCTTTT+TGG | + | chr3_2:47643497-47643516 | Msa0408110:intron | 30.0% |
| !! | AGTTTTATGATAGACACTGA+AGG | - | chr3_2:47643687-47643706 | None:intergenic | 30.0% |
| CACATCATATCACTTTACAT+CGG | + | chr3_2:47643828-47643847 | Msa0408110:intron | 30.0% | |
| TGAATGCCTTTATATTGTGA+TGG | + | chr3_2:47643958-47643977 | Msa0408110:intron | 30.0% | |
| ATCATGTATTGTCATGACAT+GGG | + | chr3_2:47644032-47644051 | Msa0408110:intron | 30.0% | |
| TATACAAAGCAAGTGAATGA+GGG | + | chr3_2:47641940-47641959 | Msa0408110:CDS | 30.0% | |
| AACAAGAGGAAAATTCTACA+GGG | + | chr3_2:47641977-47641996 | Msa0408110:CDS | 30.0% | |
| !!! | GGTGTGATTTTTTGTTATGA+TGG | + | chr3_2:47642126-47642145 | Msa0408110:intron | 30.0% |
| TCTCCTGTTAAAATTCCAAA+AGG | - | chr3_2:47642167-47642186 | None:intergenic | 30.0% | |
| ! | GTTTTGTCCTAAAATCGTTT+TGG | + | chr3_2:47642412-47642431 | Msa0408110:intron | 30.0% |
| CATTTGTTTGACAAGAACTT+TGG | - | chr3_2:47642521-47642540 | None:intergenic | 30.0% | |
| CTTATTAGCTCAGATATCAA+AGG | - | chr3_2:47642686-47642705 | None:intergenic | 30.0% | |
| ACTTTAGTCATCTATACCTT+CGG | - | chr3_2:47642840-47642859 | None:intergenic | 30.0% | |
| TGTAAACTTCATTGTAGTCT+TGG | + | chr3_2:47643176-47643195 | Msa0408110:intron | 30.0% | |
| GTAAACTTCATTGTAGTCTT+GGG | + | chr3_2:47643177-47643196 | Msa0408110:intron | 30.0% | |
| ATCTCATAAGCAACAAATCA+AGG | - | chr3_2:47643306-47643325 | None:intergenic | 30.0% | |
| !! | CTTTTGAAAGTATAGTTGTG+AGG | + | chr3_2:47643449-47643468 | Msa0408110:intron | 30.0% |
| !!! | TACCTTTTTAGCTTCCTTTT+TGG | + | chr3_2:47643497-47643516 | Msa0408110:intron | 30.0% |
| !! | AGTTTTATGATAGACACTGA+AGG | - | chr3_2:47643687-47643706 | None:intergenic | 30.0% |
| CACATCATATCACTTTACAT+CGG | + | chr3_2:47643828-47643847 | Msa0408110:intron | 30.0% | |
| TGAATGCCTTTATATTGTGA+TGG | + | chr3_2:47643958-47643977 | Msa0408110:intron | 30.0% | |
| ATCATGTATTGTCATGACAT+GGG | + | chr3_2:47644032-47644051 | Msa0408110:intron | 30.0% | |
| CTATACAAAGCAAGTGAATG+AGG | + | chr3_2:47641939-47641958 | Msa0408110:CDS | 35.0% | |
| AGAAGAAGAACATCAACAAG+AGG | + | chr3_2:47641963-47641982 | Msa0408110:CDS | 35.0% | |
| CAACAAGAGGAAAATTCTAC+AGG | + | chr3_2:47641976-47641995 | Msa0408110:CDS | 35.0% | |
| ACAAGAGGAAAATTCTACAG+GGG | + | chr3_2:47641978-47641997 | Msa0408110:CDS | 35.0% | |
| GGATATCTTGCAGTTATTAG+AGG | + | chr3_2:47642054-47642073 | Msa0408110:CDS | 35.0% | |
| !! | TTGCAGTTATTAGAGGCATT+AGG | + | chr3_2:47642061-47642080 | Msa0408110:CDS | 35.0% |
| GAGAGCTATTATGACATGAA+GGG | + | chr3_2:47642183-47642202 | Msa0408110:intron | 35.0% | |
| ! | TCTTTGGCCAAAACGATTTT+AGG | - | chr3_2:47642422-47642441 | None:intergenic | 35.0% |
| GGGAAATTATTCTTTGTGCT+AGG | + | chr3_2:47642607-47642626 | Msa0408110:intron | 35.0% | |
| GAATGTTTAACAGTCTCTCA+GGG | - | chr3_2:47642778-47642797 | None:intergenic | 35.0% | |
| TGAATGTTTAACAGTCTCTC+AGG | - | chr3_2:47642779-47642798 | None:intergenic | 35.0% | |
| CACACAATTGAAAACAGAAG+AGG | - | chr3_2:47643416-47643435 | None:intergenic | 35.0% | |
| TGCCAAAAAGGAAGCTAAAA+AGG | - | chr3_2:47643502-47643521 | None:intergenic | 35.0% | |
| AAGTGTAGATTTCACATCAG+TGG | + | chr3_2:47643629-47643648 | Msa0408110:intron | 35.0% | |
| AGTGTAGATTTCACATCAGT+GGG | + | chr3_2:47643630-47643649 | Msa0408110:intron | 35.0% | |
| AAAAGAACGTATCACATCAG+TGG | + | chr3_2:47643735-47643754 | Msa0408110:intron | 35.0% | |
| AAAGAACGTATCACATCAGT+GGG | + | chr3_2:47643736-47643755 | Msa0408110:intron | 35.0% | |
| AATAGCGAAATTTCCACATC+AGG | - | chr3_2:47643769-47643788 | None:intergenic | 35.0% | |
| CGATGTAAAGTGATATGATG+TGG | - | chr3_2:47643830-47643849 | None:intergenic | 35.0% | |
| !! | AAACTACTTTTCACATCAGG+TGG | - | chr3_2:47643857-47643876 | None:intergenic | 35.0% |
| !! | TGGAAACTACTTTTCACATC+AGG | - | chr3_2:47643860-47643879 | None:intergenic | 35.0% |
| ! | ATTGTGATGGAATTGTGCTA+TGG | + | chr3_2:47643971-47643990 | Msa0408110:intron | 35.0% |
| ! | TTGTGATGGAATTGTGCTAT+GGG | + | chr3_2:47643972-47643991 | Msa0408110:intron | 35.0% |
| CATCATGTATTGTCATGACA+TGG | + | chr3_2:47644031-47644050 | Msa0408110:intron | 35.0% | |
| ACAACTACCTCTTCAAATCA+TGG | - | chr3_2:47644098-47644117 | None:intergenic | 35.0% | |
| CTATACAAAGCAAGTGAATG+AGG | + | chr3_2:47641939-47641958 | Msa0408110:CDS | 35.0% | |
| AGAAGAAGAACATCAACAAG+AGG | + | chr3_2:47641963-47641982 | Msa0408110:CDS | 35.0% | |
| CAACAAGAGGAAAATTCTAC+AGG | + | chr3_2:47641976-47641995 | Msa0408110:CDS | 35.0% | |
| ACAAGAGGAAAATTCTACAG+GGG | + | chr3_2:47641978-47641997 | Msa0408110:CDS | 35.0% | |
| GGATATCTTGCAGTTATTAG+AGG | + | chr3_2:47642054-47642073 | Msa0408110:CDS | 35.0% | |
| !! | TTGCAGTTATTAGAGGCATT+AGG | + | chr3_2:47642061-47642080 | Msa0408110:CDS | 35.0% |
| GAGAGCTATTATGACATGAA+GGG | + | chr3_2:47642183-47642202 | Msa0408110:intron | 35.0% | |
| ! | TCTTTGGCCAAAACGATTTT+AGG | - | chr3_2:47642422-47642441 | None:intergenic | 35.0% |
| GGGAAATTATTCTTTGTGCT+AGG | + | chr3_2:47642607-47642626 | Msa0408110:intron | 35.0% | |
| GAATGTTTAACAGTCTCTCA+GGG | - | chr3_2:47642778-47642797 | None:intergenic | 35.0% | |
| TGAATGTTTAACAGTCTCTC+AGG | - | chr3_2:47642779-47642798 | None:intergenic | 35.0% | |
| CACACAATTGAAAACAGAAG+AGG | - | chr3_2:47643416-47643435 | None:intergenic | 35.0% | |
| TGCCAAAAAGGAAGCTAAAA+AGG | - | chr3_2:47643502-47643521 | None:intergenic | 35.0% | |
| AAGTGTAGATTTCACATCAG+TGG | + | chr3_2:47643629-47643648 | Msa0408110:intron | 35.0% | |
| AGTGTAGATTTCACATCAGT+GGG | + | chr3_2:47643630-47643649 | Msa0408110:intron | 35.0% | |
| AAAAGAACGTATCACATCAG+TGG | + | chr3_2:47643735-47643754 | Msa0408110:intron | 35.0% | |
| AAAGAACGTATCACATCAGT+GGG | + | chr3_2:47643736-47643755 | Msa0408110:intron | 35.0% | |
| AATAGCGAAATTTCCACATC+AGG | - | chr3_2:47643769-47643788 | None:intergenic | 35.0% | |
| CGATGTAAAGTGATATGATG+TGG | - | chr3_2:47643830-47643849 | None:intergenic | 35.0% | |
| !! | AAACTACTTTTCACATCAGG+TGG | - | chr3_2:47643857-47643876 | None:intergenic | 35.0% |
| !! | TGGAAACTACTTTTCACATC+AGG | - | chr3_2:47643860-47643879 | None:intergenic | 35.0% |
| ! | ATTGTGATGGAATTGTGCTA+TGG | + | chr3_2:47643971-47643990 | Msa0408110:intron | 35.0% |
| ! | TTGTGATGGAATTGTGCTAT+GGG | + | chr3_2:47643972-47643991 | Msa0408110:intron | 35.0% |
| CATCATGTATTGTCATGACA+TGG | + | chr3_2:47644031-47644050 | Msa0408110:intron | 35.0% | |
| ACAACTACCTCTTCAAATCA+TGG | - | chr3_2:47644098-47644117 | None:intergenic | 35.0% | |
| CCAACTAGCTCAATTCTGTA+AGG | - | chr3_2:47642021-47642040 | None:intergenic | 40.0% | |
| CCTTACAGAATTGAGCTAGT+TGG | + | chr3_2:47642018-47642037 | Msa0408110:CDS | 40.0% | |
| GGAGAGCTATTATGACATGA+AGG | + | chr3_2:47642182-47642201 | Msa0408110:intron | 40.0% | |
| TTATGACATGAAGGGCAATG+AGG | + | chr3_2:47642191-47642210 | Msa0408110:intron | 40.0% | |
| TATGACATGAAGGGCAATGA+GGG | + | chr3_2:47642192-47642211 | Msa0408110:intron | 40.0% | |
| CTCTATTGCACAGATGTTGT+TGG | + | chr3_2:47642292-47642311 | Msa0408110:CDS | 40.0% | |
| TATTGCACAGATGTTGTTGG+TGG | + | chr3_2:47642295-47642314 | Msa0408110:CDS | 40.0% | |
| !!! | GTTGCTCCTGTTTTTACCTT+TGG | - | chr3_2:47642325-47642344 | None:intergenic | 40.0% |
| !! | CGTTTTGGCCAAAGATAATC+AGG | + | chr3_2:47642427-47642446 | Msa0408110:intron | 40.0% |
| ACTTACGGCCTGATTATCTT+TGG | - | chr3_2:47642438-47642457 | None:intergenic | 40.0% | |
| CTCTATTGAATCTGCAGAAG+CGG | + | chr3_2:47642932-47642951 | Msa0408110:CDS | 40.0% | |
| ! | TTGTAGCTCTGCTTCTGTTA+GGG | - | chr3_2:47642965-47642984 | None:intergenic | 40.0% |
| ! | ATGATTAGTTGCCCAAGACT+TGG | + | chr3_2:47643375-47643394 | Msa0408110:intron | 40.0% |
| ! | TGATTAGTTGCCCAAGACTT+GGG | + | chr3_2:47643376-47643395 | Msa0408110:intron | 40.0% |
| ATTCAGTAAGCCCAAGTCTT+GGG | - | chr3_2:47643389-47643408 | None:intergenic | 40.0% | |
| !! | TGTGCACGTCATTTTACATC+AGG | - | chr3_2:47643805-47643824 | None:intergenic | 40.0% |
| TTCTGTAGTAGTGCATGAAG+TGG | + | chr3_2:47643898-47643917 | Msa0408110:intron | 40.0% | |
| TCTGTAGTAGTGCATGAAGT+GGG | + | chr3_2:47643899-47643918 | Msa0408110:intron | 40.0% | |
| ! | TGTGATGGAATTGTGCTATG+GGG | + | chr3_2:47643973-47643992 | Msa0408110:intron | 40.0% |
| TACCAAGTCTGAGAAGTTGA+AGG | + | chr3_2:47644070-47644089 | Msa0408110:intron | 40.0% | |
| AACCTTCAACTTCTCAGACT+TGG | - | chr3_2:47644075-47644094 | None:intergenic | 40.0% | |
| GAAGGTTCCATGATTTGAAG+AGG | + | chr3_2:47644088-47644107 | Msa0408110:intron | 40.0% | |
| ! | GAAGTATTCAAGAAGCACAG+AGG | + | chr3_2:47644166-47644185 | Msa0408110:CDS | 40.0% |
| ! | AAGAAGCACAGAGGTTTGAT+GGG | + | chr3_2:47644175-47644194 | Msa0408110:CDS | 40.0% |
| ! | TTTGATGGGAATGGAAGCAT+TGG | + | chr3_2:47644189-47644208 | Msa0408110:CDS | 40.0% |
| CCAACTAGCTCAATTCTGTA+AGG | - | chr3_2:47642021-47642040 | None:intergenic | 40.0% | |
| CCTTACAGAATTGAGCTAGT+TGG | + | chr3_2:47642018-47642037 | Msa0408110:CDS | 40.0% | |
| GGAGAGCTATTATGACATGA+AGG | + | chr3_2:47642182-47642201 | Msa0408110:intron | 40.0% | |
| TTATGACATGAAGGGCAATG+AGG | + | chr3_2:47642191-47642210 | Msa0408110:intron | 40.0% | |
| TATGACATGAAGGGCAATGA+GGG | + | chr3_2:47642192-47642211 | Msa0408110:intron | 40.0% | |
| CTCTATTGCACAGATGTTGT+TGG | + | chr3_2:47642292-47642311 | Msa0408110:CDS | 40.0% | |
| TATTGCACAGATGTTGTTGG+TGG | + | chr3_2:47642295-47642314 | Msa0408110:CDS | 40.0% | |
| !!! | GTTGCTCCTGTTTTTACCTT+TGG | - | chr3_2:47642325-47642344 | None:intergenic | 40.0% |
| !! | CGTTTTGGCCAAAGATAATC+AGG | + | chr3_2:47642427-47642446 | Msa0408110:intron | 40.0% |
| ACTTACGGCCTGATTATCTT+TGG | - | chr3_2:47642438-47642457 | None:intergenic | 40.0% | |
| CTCTATTGAATCTGCAGAAG+CGG | + | chr3_2:47642932-47642951 | Msa0408110:CDS | 40.0% | |
| ! | TTGTAGCTCTGCTTCTGTTA+GGG | - | chr3_2:47642965-47642984 | None:intergenic | 40.0% |
| ! | ATGATTAGTTGCCCAAGACT+TGG | + | chr3_2:47643375-47643394 | Msa0408110:intron | 40.0% |
| ! | TGATTAGTTGCCCAAGACTT+GGG | + | chr3_2:47643376-47643395 | Msa0408110:intron | 40.0% |
| ATTCAGTAAGCCCAAGTCTT+GGG | - | chr3_2:47643389-47643408 | None:intergenic | 40.0% | |
| !! | TGTGCACGTCATTTTACATC+AGG | - | chr3_2:47643805-47643824 | None:intergenic | 40.0% |
| TTCTGTAGTAGTGCATGAAG+TGG | + | chr3_2:47643898-47643917 | Msa0408110:intron | 40.0% | |
| TCTGTAGTAGTGCATGAAGT+GGG | + | chr3_2:47643899-47643918 | Msa0408110:intron | 40.0% | |
| ! | TGTGATGGAATTGTGCTATG+GGG | + | chr3_2:47643973-47643992 | Msa0408110:intron | 40.0% |
| TACCAAGTCTGAGAAGTTGA+AGG | + | chr3_2:47644070-47644089 | Msa0408110:intron | 40.0% | |
| AACCTTCAACTTCTCAGACT+TGG | - | chr3_2:47644075-47644094 | None:intergenic | 40.0% | |
| GAAGGTTCCATGATTTGAAG+AGG | + | chr3_2:47644088-47644107 | Msa0408110:intron | 40.0% | |
| ! | GAAGTATTCAAGAAGCACAG+AGG | + | chr3_2:47644166-47644185 | Msa0408110:CDS | 40.0% |
| ! | AAGAAGCACAGAGGTTTGAT+GGG | + | chr3_2:47644175-47644194 | Msa0408110:CDS | 40.0% |
| ! | TTTGATGGGAATGGAAGCAT+TGG | + | chr3_2:47644189-47644208 | Msa0408110:CDS | 40.0% |
| ! | CAGAATTGAGCTAGTTGGTG+TGG | + | chr3_2:47642023-47642042 | Msa0408110:CDS | 45.0% |
| ! | CTAGTTGGTGTGGTTTGTGA+TGG | + | chr3_2:47642033-47642052 | Msa0408110:CDS | 45.0% |
| !! | GCAAACTTGTTGACAGTGCT+AGG | + | chr3_2:47642269-47642288 | Msa0408110:CDS | 45.0% |
| GGTCCACCAAAGGTAAAAAC+AGG | + | chr3_2:47642316-47642335 | Msa0408110:intron | 45.0% | |
| !!! | GCTCCTGTTTTTACCTTTGG+TGG | - | chr3_2:47642322-47642341 | None:intergenic | 45.0% |
| !! | AGTCTCTCAGGGTTGATACA+TGG | - | chr3_2:47642767-47642786 | None:intergenic | 45.0% |
| TATAAACTTGGGTCTGCAGC+AGG | + | chr3_2:47642860-47642879 | Msa0408110:intron | 45.0% | |
| CGCTTCTGCAGATTCAATAG+AGG | - | chr3_2:47642934-47642953 | None:intergenic | 45.0% | |
| ! | CTTGTAGCTCTGCTTCTGTT+AGG | - | chr3_2:47642966-47642985 | None:intergenic | 45.0% |
| AGTACTGCTTCAAGAAGTCG+AGG | + | chr3_2:47642984-47643003 | Msa0408110:CDS | 45.0% | |
| ! | GTCGTTAGCTGGTAATGAAG+AGG | + | chr3_2:47643016-47643035 | Msa0408110:CDS | 45.0% |
| GGTGTCAAAGAGTCATCACA+TGG | - | chr3_2:47643285-47643304 | None:intergenic | 45.0% | |
| TGGGCAACTAATCATCAGGA+TGG | - | chr3_2:47643370-47643389 | None:intergenic | 45.0% | |
| GTCTTGGGCAACTAATCATC+AGG | - | chr3_2:47643374-47643393 | None:intergenic | 45.0% | |
| GATTCAGTAAGCCCAAGTCT+TGG | - | chr3_2:47643390-47643409 | None:intergenic | 45.0% | |
| AGTGGGAAAAAAGCCTGATG+TGG | + | chr3_2:47643753-47643772 | Msa0408110:intron | 45.0% | |
| !! | GAAGTGGGTTTGCAAGCTTT+TGG | + | chr3_2:47643914-47643933 | Msa0408110:intron | 45.0% |
| ! | CAAGAAGCACAGAGGTTTGA+TGG | + | chr3_2:47644174-47644193 | Msa0408110:CDS | 45.0% |
| ! | CAGAATTGAGCTAGTTGGTG+TGG | + | chr3_2:47642023-47642042 | Msa0408110:CDS | 45.0% |
| ! | CTAGTTGGTGTGGTTTGTGA+TGG | + | chr3_2:47642033-47642052 | Msa0408110:CDS | 45.0% |
| !! | GCAAACTTGTTGACAGTGCT+AGG | + | chr3_2:47642269-47642288 | Msa0408110:CDS | 45.0% |
| GGTCCACCAAAGGTAAAAAC+AGG | + | chr3_2:47642316-47642335 | Msa0408110:intron | 45.0% | |
| !!! | GCTCCTGTTTTTACCTTTGG+TGG | - | chr3_2:47642322-47642341 | None:intergenic | 45.0% |
| !! | AGTCTCTCAGGGTTGATACA+TGG | - | chr3_2:47642767-47642786 | None:intergenic | 45.0% |
| TATAAACTTGGGTCTGCAGC+AGG | + | chr3_2:47642860-47642879 | Msa0408110:intron | 45.0% | |
| CGCTTCTGCAGATTCAATAG+AGG | - | chr3_2:47642934-47642953 | None:intergenic | 45.0% | |
| ! | CTTGTAGCTCTGCTTCTGTT+AGG | - | chr3_2:47642966-47642985 | None:intergenic | 45.0% |
| AGTACTGCTTCAAGAAGTCG+AGG | + | chr3_2:47642984-47643003 | Msa0408110:CDS | 45.0% | |
| ! | GTCGTTAGCTGGTAATGAAG+AGG | + | chr3_2:47643016-47643035 | Msa0408110:CDS | 45.0% |
| GGTGTCAAAGAGTCATCACA+TGG | - | chr3_2:47643285-47643304 | None:intergenic | 45.0% | |
| TGGGCAACTAATCATCAGGA+TGG | - | chr3_2:47643370-47643389 | None:intergenic | 45.0% | |
| GTCTTGGGCAACTAATCATC+AGG | - | chr3_2:47643374-47643393 | None:intergenic | 45.0% | |
| GATTCAGTAAGCCCAAGTCT+TGG | - | chr3_2:47643390-47643409 | None:intergenic | 45.0% | |
| AGTGGGAAAAAAGCCTGATG+TGG | + | chr3_2:47643753-47643772 | Msa0408110:intron | 45.0% | |
| !! | GAAGTGGGTTTGCAAGCTTT+TGG | + | chr3_2:47643914-47643933 | Msa0408110:intron | 45.0% |
| ! | CAAGAAGCACAGAGGTTTGA+TGG | + | chr3_2:47644174-47644193 | Msa0408110:CDS | 45.0% |
| !! | TGTTGTTGGTGGTCCACCAA+AGG | + | chr3_2:47642306-47642325 | Msa0408110:CDS | 50.0% |
| GGAAGAGAAGAGTCGTTAGC+TGG | + | chr3_2:47643005-47643024 | Msa0408110:CDS | 50.0% | |
| GCACAGAGGTTTGATGGGAA+TGG | + | chr3_2:47644180-47644199 | Msa0408110:CDS | 50.0% | |
| !! | TGTTGTTGGTGGTCCACCAA+AGG | + | chr3_2:47642306-47642325 | Msa0408110:CDS | 50.0% |
| GGAAGAGAAGAGTCGTTAGC+TGG | + | chr3_2:47643005-47643024 | Msa0408110:CDS | 50.0% | |
| GCACAGAGGTTTGATGGGAA+TGG | + | chr3_2:47644180-47644199 | Msa0408110:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 47641916 | 47644237 | 47641916 | ID=Msa0408110;Name=Msa0408110 |
| chr3_2 | mRNA | 47641916 | 47644237 | 47641916 | ID=Msa0408110-mRNA-1;Parent=Msa0408110;Name=Msa0408110-mRNA-1;_AED=0.27;_eAED=0.58;_QI=0|0|0|0.5|0.66|0.75|4|0|169 |
| chr3_2 | exon | 47641916 | 47642082 | 47641916 | ID=Msa0408110-mRNA-1:exon:9146;Parent=Msa0408110-mRNA-1 |
| chr3_2 | exon | 47642204 | 47642327 | 47642204 | ID=Msa0408110-mRNA-1:exon:9147;Parent=Msa0408110-mRNA-1 |
| chr3_2 | exon | 47642921 | 47643037 | 47642921 | ID=Msa0408110-mRNA-1:exon:9148;Parent=Msa0408110-mRNA-1 |
| chr3_2 | exon | 47644136 | 47644237 | 47644136 | ID=Msa0408110-mRNA-1:exon:9149;Parent=Msa0408110-mRNA-1 |
| chr3_2 | CDS | 47641916 | 47642082 | 47641916 | ID=Msa0408110-mRNA-1:cds;Parent=Msa0408110-mRNA-1 |
| chr3_2 | CDS | 47642204 | 47642327 | 47642204 | ID=Msa0408110-mRNA-1:cds;Parent=Msa0408110-mRNA-1 |
| chr3_2 | CDS | 47642921 | 47643037 | 47642921 | ID=Msa0408110-mRNA-1:cds;Parent=Msa0408110-mRNA-1 |
| chr3_2 | CDS | 47644136 | 47644237 | 47644136 | ID=Msa0408110-mRNA-1:cds;Parent=Msa0408110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
