Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158480 | XP_013450334.1 | 82.245 | 383 | 12 | 2 | 1 | 327 | 1 | 383 | 0.0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158480 | sp|Q9FVQ0|YUC10_ARATH | 40.957 | 376 | 166 | 2 | 8 | 327 | 5 | 380 | 1.08e-106 | 319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158480 | A0A072U3V7 | 82.245 | 383 | 12 | 2 | 1 | 327 | 1 | 383 | 0.0 | 626 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0158480 | 0.805078 | 1.587929e-49 | -8.615850e-47 |
| Msa0015390 | Msa0158480 | 0.805716 | 1.166876e-49 | -8.615850e-47 |
| Msa0017510 | Msa0158480 | 0.809551 | 1.789708e-50 | -8.615850e-47 |
| Msa0018650 | Msa0158480 | 0.917032 | 8.698342e-86 | -8.615850e-47 |
| Msa0062860 | Msa0158480 | 0.809763 | 1.610926e-50 | -8.615850e-47 |
| Msa0067140 | Msa0158480 | 0.885346 | 8.801283e-72 | -8.615850e-47 |
| Msa0112590 | Msa0158480 | 0.906543 | 1.326330e-80 | -8.615850e-47 |
| Msa0114060 | Msa0158480 | 0.803030 | 4.234331e-49 | -8.615850e-47 |
| Msa0120300 | Msa0158480 | 0.812527 | 4.054121e-51 | -8.615850e-47 |
| Msa0131770 | Msa0158480 | 0.816936 | 4.277387e-52 | -8.615850e-47 |
| Msa0142220 | Msa0158480 | 0.817160 | 3.807717e-52 | -8.615850e-47 |
| Msa0157290 | Msa0158480 | 0.809471 | 1.861485e-50 | -8.615850e-47 |
| Msa0158480 | Msa0178930 | 0.801640 | 8.186764e-49 | -8.615850e-47 |
| Msa0158480 | Msa0188830 | 0.811889 | 5.586111e-51 | -8.615850e-47 |
| Msa0158480 | Msa0205510 | 0.815034 | 1.136638e-51 | -8.615850e-47 |
| Msa0158480 | Msa0208090 | 0.805571 | 1.251839e-49 | -8.615850e-47 |
| Msa0158480 | Msa0210450 | 0.800160 | 1.641555e-48 | -8.615850e-47 |
| Msa0158480 | Msa0215320 | -0.812527 | 4.053408e-51 | -8.615850e-47 |
| Msa0158480 | Msa0218240 | 0.813097 | 3.040925e-51 | -8.615850e-47 |
| Msa0158480 | Msa0220580 | 0.805159 | 1.526954e-49 | -8.615850e-47 |
| Msa0158480 | Msa0223260 | 0.806865 | 6.682262e-50 | -8.615850e-47 |
| Msa0158480 | Msa0226890 | 0.802422 | 5.653125e-49 | -8.615850e-47 |
| Msa0158480 | Msa0231000 | 0.800170 | 1.634114e-48 | -8.615850e-47 |
| Msa0158480 | Msa0233080 | 0.800251 | 1.572904e-48 | -8.615850e-47 |
| Msa0158480 | Msa0233300 | 0.820733 | 5.867058e-53 | -8.615850e-47 |
| Msa0158480 | Msa0266720 | 0.804709 | 1.896843e-49 | -8.615850e-47 |
| Msa0158480 | Msa0288100 | 0.804600 | 1.998770e-49 | -8.615850e-47 |
| Msa0158480 | Msa0305190 | 0.805499 | 1.295934e-49 | -8.615850e-47 |
| Msa0158480 | Msa0329190 | 0.802591 | 5.218126e-49 | -8.615850e-47 |
| Msa0158480 | Msa0337900 | 0.800316 | 1.526196e-48 | -8.615850e-47 |
| Msa0158480 | Msa0340450 | 0.800843 | 1.191385e-48 | -8.615850e-47 |
| Msa0158480 | Msa0344910 | 0.827372 | 1.622110e-54 | -8.615850e-47 |
| Msa0158480 | Msa0344980 | 0.808187 | 3.502797e-50 | -8.615850e-47 |
| Msa0158480 | Msa0355220 | 0.839099 | 1.940097e-57 | -8.615850e-47 |
| Msa0158480 | Msa0357340 | 0.807054 | 6.095391e-50 | -8.615850e-47 |
| Msa0158480 | Msa0359030 | 0.802154 | 6.417323e-49 | -8.615850e-47 |
| Msa0158480 | Msa0371730 | 0.806865 | 6.684723e-50 | -8.615850e-47 |
| Msa0158480 | Msa0376590 | 0.818152 | 2.275234e-52 | -8.615850e-47 |
| Msa0158480 | Msa0384890 | 0.810030 | 1.411706e-50 | -8.615850e-47 |
| Msa0158480 | Msa0395570 | 0.802534 | 5.359630e-49 | -8.615850e-47 |
| Msa0158480 | Msa0395790 | 0.800446 | 1.435819e-48 | -8.615850e-47 |
| Msa0158480 | Msa0402290 | 0.846769 | 1.764055e-59 | -8.615850e-47 |
| Msa0158480 | Msa0408110 | 0.804907 | 1.723830e-49 | -8.615850e-47 |
| Msa0158480 | Msa0417100 | 0.800138 | 1.659086e-48 | -8.615850e-47 |
| Msa0158480 | Msa0424320 | 0.815357 | 9.633844e-52 | -8.615850e-47 |
| Msa0158480 | Msa0431690 | 0.824684 | 7.065113e-54 | -8.615850e-47 |
| Msa0158480 | Msa0432300 | 0.808027 | 3.788199e-50 | -8.615850e-47 |
| Msa0158480 | Msa0435230 | 0.810124 | 1.347147e-50 | -8.615850e-47 |
| Msa0158480 | Msa0440400 | 0.802656 | 5.058423e-49 | -8.615850e-47 |
| Msa0158480 | Msa0440750 | 0.806427 | 8.271188e-50 | -8.615850e-47 |
| Msa0158480 | Msa0443260 | 0.801339 | 9.434403e-49 | -8.615850e-47 |
| Msa0158480 | Msa0444750 | -0.808297 | 3.319440e-50 | -8.615850e-47 |
| Msa0158480 | Msa0479340 | 0.826199 | 3.092871e-54 | -8.615850e-47 |
| Msa0158480 | Msa0484780 | 0.814333 | 1.625484e-51 | -8.615850e-47 |
| Msa0158480 | Msa0495330 | 0.806075 | 9.808889e-50 | -8.615850e-47 |
| Msa0158480 | Msa0512900 | 0.824189 | 9.235543e-54 | -8.615850e-47 |
| Msa0158480 | Msa0516370 | 0.805471 | 1.313947e-49 | -8.615850e-47 |
| Msa0158480 | Msa0523940 | 0.837629 | 4.643945e-57 | -8.615850e-47 |
| Msa0158480 | Msa0532350 | 0.819854 | 9.332168e-53 | -8.615850e-47 |
| Msa0158480 | Msa0545210 | 0.805349 | 1.393222e-49 | -8.615850e-47 |
| Msa0158480 | Msa0554050 | 0.807568 | 4.744313e-50 | -8.615850e-47 |
| Msa0158480 | Msa0562440 | 0.809601 | 1.746087e-50 | -8.615850e-47 |
| Msa0158480 | Msa0585230 | 0.801718 | 7.888667e-49 | -8.615850e-47 |
| Msa0158480 | Msa0598780 | 0.822056 | 2.905713e-53 | -8.615850e-47 |
| Msa0158480 | Msa0600700 | 0.810637 | 1.044144e-50 | -8.615850e-47 |
| Msa0158480 | Msa0620960 | 0.811449 | 6.963718e-51 | -8.615850e-47 |
| Msa0158480 | Msa0650630 | 0.831943 | 1.253448e-55 | -8.615850e-47 |
| Msa0158480 | Msa0657970 | 0.832791 | 7.728241e-56 | -8.615850e-47 |
| Msa0158480 | Msa0661650 | 0.811390 | 7.171280e-51 | -8.615850e-47 |
| Msa0158480 | Msa0673450 | 0.827071 | 1.915841e-54 | -8.615850e-47 |
| Msa0158480 | Msa0673460 | 0.829192 | 5.907552e-55 | -8.615850e-47 |
| Msa0158480 | Msa0681250 | 0.804809 | 1.807078e-49 | -8.615850e-47 |
| Msa0158480 | Msa0681270 | 0.811707 | 6.119001e-51 | -8.615850e-47 |
| Msa0158480 | Msa0685900 | 0.800570 | 1.354582e-48 | -8.615850e-47 |
| Msa0158480 | Msa0687070 | 0.809294 | 2.031989e-50 | -8.615850e-47 |
| Msa0158480 | Msa0688270 | 0.829268 | 5.660157e-55 | -8.615850e-47 |
| Msa0158480 | Msa0693380 | 0.800648 | 1.305946e-48 | -8.615850e-47 |
| Msa0158480 | Msa0701010 | 0.839337 | 1.682667e-57 | -8.615850e-47 |
| Msa0158480 | Msa0715470 | 0.806925 | 6.492143e-50 | -8.615850e-47 |
| Msa0158480 | Msa0731940 | 0.827181 | 1.802592e-54 | -8.615850e-47 |
| Msa0158480 | Msa0735170 | 0.820985 | 5.135439e-53 | -8.615850e-47 |
| Msa0158480 | Msa0753720 | 0.807369 | 5.228436e-50 | -8.615850e-47 |
| Msa0158480 | Msa0760130 | 0.820878 | 5.435759e-53 | -8.615850e-47 |
| Msa0158480 | Msa0766630 | 0.848907 | 4.543570e-60 | -8.615850e-47 |
| Msa0158480 | Msa0767760 | 0.819700 | 1.011942e-52 | -8.615850e-47 |
| Msa0158480 | Msa0768310 | 0.811782 | 5.894814e-51 | -8.615850e-47 |
| Msa0158480 | Msa0790510 | 0.803747 | 3.007870e-49 | -8.615850e-47 |
| Msa0158480 | Msa0810220 | 0.820264 | 7.518575e-53 | -8.615850e-47 |
| Msa0158480 | Msa0820850 | 0.810953 | 8.921451e-51 | -8.615850e-47 |
| Msa0158480 | Msa0822870 | 0.803673 | 3.115380e-49 | -8.615850e-47 |
| Msa0158480 | Msa0832340 | 0.821333 | 4.268328e-53 | -8.615850e-47 |
| Msa0158480 | Msa0844490 | 0.807334 | 5.318005e-50 | -8.615850e-47 |
| Msa0158480 | Msa0844570 | 0.802368 | 5.798373e-49 | -8.615850e-47 |
| Msa0158480 | Msa0849030 | 0.808399 | 3.157091e-50 | -8.615850e-47 |
| Msa0158480 | Msa0857640 | 0.807686 | 4.476654e-50 | -8.615850e-47 |
| Msa0158480 | Msa0858980 | 0.814946 | 1.188804e-51 | -8.615850e-47 |
| Msa0158480 | Msa0861130 | 0.812590 | 3.927669e-51 | -8.615850e-47 |
| Msa0158480 | Msa0877250 | 0.822135 | 2.785664e-53 | -8.615850e-47 |
| Msa0158480 | Msa0880140 | 0.805097 | 1.573696e-49 | -8.615850e-47 |
| Msa0158480 | Msa0892080 | 0.815566 | 8.659541e-52 | -8.615850e-47 |
| Msa0158480 | Msa0897330 | 0.802078 | 6.652460e-49 | -8.615850e-47 |
| Msa0158480 | Msa0897880 | 0.818897 | 1.542302e-52 | -8.615850e-47 |
| Msa0158480 | Msa0899430 | 0.807748 | 4.343170e-50 | -8.615850e-47 |
| Msa0158480 | Msa0899450 | 0.832827 | 7.569684e-56 | -8.615850e-47 |
| Msa0158480 | Msa0907070 | 0.816572 | 5.160492e-52 | -8.615850e-47 |
| Msa0158480 | Msa0907260 | 0.851296 | 9.736819e-61 | -8.615850e-47 |
| Msa0158480 | Msa0909140 | 0.809525 | 1.812782e-50 | -8.615850e-47 |
| Msa0158480 | Msa0927380 | 0.821219 | 4.535344e-53 | -8.615850e-47 |
| Msa0158480 | Msa0933100 | 0.812878 | 3.397395e-51 | -8.615850e-47 |
| Msa0158480 | Msa0935910 | 0.814646 | 1.385552e-51 | -8.615850e-47 |
| Msa0158480 | Msa0942200 | 0.801686 | 8.007837e-49 | -8.615850e-47 |
| Msa0158480 | Msa0953120 | 0.822887 | 1.862518e-53 | -8.615850e-47 |
| Msa0158480 | Msa0954910 | 0.802194 | 6.297202e-49 | -8.615850e-47 |
| Msa0158480 | Msa0956270 | 0.852427 | 4.649132e-61 | -8.615850e-47 |
| Msa0158480 | Msa0964900 | 0.830180 | 3.395885e-55 | -8.615850e-47 |
| Msa0158480 | Msa0967280 | 0.800583 | 1.346561e-48 | -8.615850e-47 |
| Msa0158480 | Msa0969520 | 0.828315 | 9.626816e-55 | -8.615850e-47 |
| Msa0158480 | Msa0976670 | 0.804707 | 1.898337e-49 | -8.615850e-47 |
| Msa0158480 | Msa0983090 | 0.803142 | 4.014964e-49 | -8.615850e-47 |
| Msa0158480 | Msa0991830 | 0.816659 | 4.934865e-52 | -8.615850e-47 |
| Msa0158480 | Msa0998690 | 0.809381 | 1.946496e-50 | -8.615850e-47 |
| Msa0158480 | Msa0999220 | 0.808096 | 3.663849e-50 | -8.615850e-47 |
| Msa0158480 | Msa1000880 | 0.806527 | 7.876736e-50 | -8.615850e-47 |
| Msa0158480 | Msa1000890 | 0.822997 | 1.755749e-53 | -8.615850e-47 |
| Msa0158480 | Msa1000900 | 0.827985 | 1.156082e-54 | -8.615850e-47 |
| Msa0158480 | Msa1003620 | 0.800191 | 1.618319e-48 | -8.615850e-47 |
| Msa0158480 | Msa1014540 | 0.858110 | 1.031573e-62 | -8.615850e-47 |
| Msa0158480 | Msa1014990 | 0.806950 | 6.412775e-50 | -8.615850e-47 |
| Msa0158480 | Msa1019000 | 0.805078 | 1.587929e-49 | -8.615850e-47 |
| Msa0158480 | Msa1019150 | 0.817253 | 3.629253e-52 | -8.615850e-47 |
| Msa0158480 | Msa1028230 | 0.815535 | 8.795164e-52 | -8.615850e-47 |
| Msa0158480 | Msa1030970 | 0.824789 | 6.673652e-54 | -8.615850e-47 |
| Msa0158480 | Msa1054990 | 0.811038 | 8.550743e-51 | -8.615850e-47 |
| Msa0158480 | Msa1059570 | 0.802583 | 5.236125e-49 | -8.615850e-47 |
| Msa0158480 | Msa1070010 | 0.803746 | 3.009487e-49 | -8.615850e-47 |
| Msa0158480 | Msa1075220 | -0.831352 | 1.753040e-55 | -8.615850e-47 |
| Msa0158480 | Msa1075540 | 0.813943 | 1.981482e-51 | -8.615850e-47 |
| Msa0158480 | Msa1075650 | 0.814674 | 1.365761e-51 | -8.615850e-47 |
| Msa0158480 | Msa1081590 | 0.802887 | 4.533221e-49 | -8.615850e-47 |
| Msa0158480 | Msa1082500 | 0.838945 | 2.127460e-57 | -8.615850e-47 |
| Msa0158480 | Msa1082580 | 0.822326 | 2.514813e-53 | -8.615850e-47 |
| Msa0158480 | Msa1083840 | 0.820589 | 6.331967e-53 | -8.615850e-47 |
| Msa0158480 | Msa1090260 | 0.815106 | 1.095396e-51 | -8.615850e-47 |
| Msa0158480 | Msa1100050 | 0.810879 | 9.256683e-51 | -8.615850e-47 |
| Msa0158480 | Msa1112300 | 0.806044 | 9.955948e-50 | -8.615850e-47 |
| Msa0158480 | Msa1116130 | -0.801497 | 8.756632e-49 | -8.615850e-47 |
| Msa0158480 | Msa1121490 | 0.815751 | 7.873374e-52 | -8.615850e-47 |
| Msa0158480 | Msa1131220 | 0.805216 | 1.485503e-49 | -8.615850e-47 |
| Msa0158480 | Msa1137570 | 0.804176 | 2.449429e-49 | -8.615850e-47 |
| Msa0158480 | Msa1137690 | 0.803081 | 4.132954e-49 | -8.615850e-47 |
| Msa0158480 | Msa1139000 | -0.817127 | 3.874658e-52 | -8.615850e-47 |
| Msa0158480 | Msa1147740 | 0.824327 | 8.570238e-54 | -8.615850e-47 |
| Msa0158480 | Msa1160670 | 0.819023 | 1.443722e-52 | -8.615850e-47 |
| Msa0158480 | Msa1162550 | -0.836533 | 8.850809e-57 | -8.615850e-47 |
| Msa0158480 | Msa1174040 | 0.802468 | 5.530711e-49 | -8.615850e-47 |
| Msa0158480 | Msa1184420 | 0.805188 | 1.505689e-49 | -8.615850e-47 |
| Msa0158480 | Msa1186950 | -0.801541 | 8.576364e-49 | -8.615850e-47 |
| Msa0158480 | Msa1207220 | 0.823401 | 1.412696e-53 | -8.615850e-47 |
| Msa0158480 | Msa1225130 | 0.809215 | 2.111976e-50 | -8.615850e-47 |
| Msa0158480 | Msa1228590 | 0.807838 | 4.155953e-50 | -8.615850e-47 |
| Msa0158480 | Msa1233890 | 0.806243 | 9.041113e-50 | -8.615850e-47 |
| Msa0158480 | Msa1253000 | 0.814639 | 1.390781e-51 | -8.615850e-47 |
| Msa0158480 | Msa1253020 | 0.808922 | 2.440462e-50 | -8.615850e-47 |
| Msa0158480 | Msa1277660 | 0.810510 | 1.111945e-50 | -8.615850e-47 |
| Msa0158480 | Msa1283860 | 0.824282 | 8.784482e-54 | -8.615850e-47 |
| Msa0158480 | Msa1284680 | 0.842238 | 2.921928e-58 | -8.615850e-47 |
| Msa0158480 | Msa1286800 | 0.803960 | 2.716482e-49 | -8.615850e-47 |
| Msa0158480 | Msa1291660 | 0.802219 | 6.224729e-49 | -8.615850e-47 |
| Msa0158480 | Msa1292400 | 0.811706 | 6.122276e-51 | -8.615850e-47 |
| Msa0158480 | Msa1299960 | 0.802588 | 5.224899e-49 | -8.615850e-47 |
| Msa0158480 | Msa1306850 | 0.815268 | 1.008477e-51 | -8.615850e-47 |
| Msa0158480 | Msa1342840 | 0.800446 | 1.436074e-48 | -8.615850e-47 |
| Msa0158480 | Msa1353470 | 0.844263 | 8.426723e-59 | -8.615850e-47 |
| Msa0158480 | Msa1366810 | 0.821986 | 3.016240e-53 | -8.615850e-47 |
| Msa0158480 | Msa1372760 | 0.817373 | 3.411363e-52 | -8.615850e-47 |
| Msa0158480 | Msa1373030 | 0.816299 | 5.939642e-52 | -8.615850e-47 |
| Msa0158480 | Msa1392260 | 0.816285 | 5.982925e-52 | -8.615850e-47 |
| Msa0158480 | Msa1397860 | 0.835735 | 1.411388e-56 | -8.615850e-47 |
| Msa0158480 | Msa1429900 | 0.811273 | 7.602172e-51 | -8.615850e-47 |
| Msa0158480 | Msa1435270 | 0.820509 | 6.605095e-53 | -8.615850e-47 |
| Msa0158480 | Msa1451570 | 0.811293 | 7.525808e-51 | -8.615850e-47 |
| Msa0158480 | Msa1451620 | -0.815695 | 8.103262e-52 | -8.615850e-47 |
| Msa0158480 | Msa1466540 | 0.804830 | 1.789455e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158480 | MtrunA17_Chr7g0268611 | 82.245 | 383 | 12 | 2 | 1 | 327 | 1 | 383 | 0.0 | 626 |
| Msa0158480 | MtrunA17_Chr7g0268621 | 58.919 | 370 | 94 | 3 | 8 | 320 | 6 | 374 | 1.00e-153 | 436 |
| Msa0158480 | MtrunA17_Chr3g0125701 | 43.902 | 369 | 151 | 2 | 8 | 320 | 7 | 375 | 1.85e-105 | 313 |
| Msa0158480 | MtrunA17_Chr8g0350371 | 42.049 | 371 | 159 | 2 | 8 | 322 | 6 | 376 | 1.61e-104 | 311 |
| Msa0158480 | MtrunA17_Chr3g0125711 | 43.360 | 369 | 153 | 2 | 8 | 320 | 7 | 375 | 3.06e-104 | 311 |
| Msa0158480 | MtrunA17_Chr5g0412881 | 42.547 | 369 | 156 | 2 | 8 | 320 | 6 | 374 | 3.79e-104 | 310 |
| Msa0158480 | MtrunA17_Chr3g0125691 | 43.360 | 369 | 153 | 2 | 8 | 320 | 7 | 375 | 3.49e-103 | 308 |
| Msa0158480 | MtrunA17_Chr3g0139441 | 40.106 | 379 | 165 | 4 | 9 | 326 | 40 | 417 | 1.09e-92 | 282 |
| Msa0158480 | MtrunA17_Chr1g0147221 | 40.849 | 377 | 162 | 4 | 9 | 325 | 43 | 418 | 1.32e-92 | 282 |
| Msa0158480 | MtrunA17_Chr1g0182991 | 39.153 | 378 | 168 | 6 | 9 | 326 | 26 | 401 | 6.13e-91 | 277 |
| Msa0158480 | MtrunA17_Chr1g0148801 | 38.830 | 376 | 171 | 5 | 9 | 327 | 17 | 390 | 1.17e-90 | 276 |
| Msa0158480 | MtrunA17_Chr6g0485621 | 37.598 | 383 | 174 | 4 | 9 | 327 | 33 | 414 | 8.43e-88 | 269 |
| Msa0158480 | MtrunA17_Chr7g0262591 | 36.729 | 373 | 180 | 4 | 9 | 326 | 25 | 396 | 3.13e-87 | 268 |
| Msa0158480 | MtrunA17_Chr1g0169111 | 37.867 | 375 | 168 | 6 | 9 | 320 | 103 | 475 | 2.60e-85 | 265 |
| Msa0158480 | MtrunA17_Chr7g0262471 | 37.500 | 256 | 150 | 3 | 80 | 326 | 263 | 517 | 4.30e-57 | 193 |
| Msa0158480 | MtrunA17_Chr4g0025651 | 45.294 | 170 | 92 | 1 | 151 | 320 | 1 | 169 | 2.86e-46 | 155 |
| Msa0158480 | MtrunA17_Chr4g0025641 | 40.306 | 196 | 65 | 1 | 8 | 151 | 16 | 211 | 8.31e-45 | 153 |
| Msa0158480 | MtrunA17_Chr3g0130001 | 53.488 | 43 | 20 | 0 | 4 | 46 | 2 | 44 | 5.03e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158480 | AT1G48910.1 | 40.957 | 376 | 166 | 2 | 8 | 327 | 5 | 380 | 1.10e-107 | 319 |
| Msa0158480 | AT1G21430.1 | 40.420 | 381 | 169 | 6 | 1 | 324 | 1 | 380 | 1.40e-95 | 289 |
| Msa0158480 | AT5G25620.1 | 40.369 | 379 | 164 | 5 | 9 | 326 | 33 | 410 | 5.86e-91 | 278 |
| Msa0158480 | AT5G25620.2 | 40.369 | 379 | 164 | 5 | 9 | 326 | 33 | 410 | 9.75e-91 | 278 |
| Msa0158480 | AT1G04610.1 | 38.320 | 381 | 169 | 6 | 9 | 325 | 38 | 416 | 9.85e-89 | 273 |
| Msa0158480 | AT5G43890.1 | 37.368 | 380 | 173 | 6 | 9 | 325 | 26 | 403 | 1.34e-87 | 269 |
| Msa0158480 | AT5G11320.1 | 40.327 | 367 | 162 | 5 | 9 | 320 | 18 | 382 | 1.93e-87 | 268 |
| Msa0158480 | AT4G13260.1 | 38.874 | 373 | 166 | 4 | 9 | 320 | 29 | 400 | 3.24e-87 | 268 |
| Msa0158480 | AT4G32540.1 | 38.211 | 369 | 169 | 6 | 9 | 320 | 22 | 388 | 2.88e-86 | 266 |
| Msa0158480 | AT4G32540.2 | 38.649 | 370 | 168 | 6 | 9 | 320 | 22 | 390 | 3.40e-86 | 265 |
| Msa0158480 | AT1G04180.1 | 38.196 | 377 | 171 | 6 | 9 | 325 | 26 | 400 | 3.57e-86 | 266 |
| Msa0158480 | AT4G28720.1 | 36.220 | 381 | 177 | 7 | 9 | 325 | 26 | 404 | 1.57e-82 | 256 |
| Msa0158480 | AT2G33230.1 | 38.058 | 381 | 169 | 6 | 9 | 325 | 33 | 410 | 1.05e-80 | 252 |
| Msa0158480 | AT5G11320.2 | 39.748 | 317 | 135 | 4 | 9 | 270 | 18 | 333 | 3.82e-71 | 225 |
| Msa0158480 | AT4G13260.2 | 38.652 | 282 | 112 | 3 | 9 | 229 | 29 | 310 | 1.75e-62 | 201 |
| Msa0158480 | AT4G13260.3 | 40.800 | 250 | 138 | 3 | 80 | 320 | 49 | 297 | 2.93e-61 | 198 |
Find 68 sgRNAs with CRISPR-Local
Find 762 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAAGGGGTATGCTGAATT+TGG | 0.142332 | 1_4:-27823102 | Msa0158480:CDS |
| CTCTTCAACCCTTCAATTTC+AGG | 0.149369 | 1_4:+27828746 | None:intergenic |
| TACGGGGATGTCACGAATTA+TGG | 0.154022 | 1_4:-27823008 | Msa0158480:CDS |
| GTTGTTGGGTCTGGGAATTC+TGG | 0.176673 | 1_4:-27828653 | Msa0158480:CDS |
| GTACTTGACCTTCATATAAA+AGG | 0.212639 | 1_4:+27822962 | None:intergenic |
| TCAAGGGGTATGCTGAATTT+GGG | 0.240991 | 1_4:-27823101 | Msa0158480:CDS |
| GTTGTTGGAGCAGGCCCTTC+TGG | 0.254075 | 1_4:-27829157 | Msa0158480:CDS |
| CATGTTCTTGTTGTTGGGTC+TGG | 0.258715 | 1_4:-27828662 | Msa0158480:CDS |
| GATGGTGATGCTTAGTAAAA+TGG | 0.306091 | 1_4:-27823033 | Msa0158480:CDS |
| AATTAAGTCTCGAGAGTTAA+AGG | 0.307124 | 1_4:-27822901 | Msa0158480:intron |
| TCTCTTTCGAGGATTATATA+AGG | 0.314818 | 1_4:+27829097 | None:intergenic |
| ATGCTTAGTAAAATGGTTTA+CGG | 0.339605 | 1_4:-27823026 | Msa0158480:CDS |
| AATGAAAGAGTGATAGTTGT+TGG | 0.360593 | 1_4:-27829172 | Msa0158480:CDS |
| GGGAAAGTGATTCATTCAAC+TGG | 0.376100 | 1_4:-27828716 | Msa0158480:CDS |
| GATGAACATGTTCTTGTTGT+TGG | 0.376175 | 1_4:-27828668 | Msa0158480:CDS |
| TGCTTAGTAAAATGGTTTAC+GGG | 0.386664 | 1_4:-27823025 | Msa0158480:CDS |
| ATCAACCCACAAGTGGCTTA+AGG | 0.388610 | 1_4:-27821750 | Msa0158480:intron |
| AGCCAAGTTACCCTATTCAT+TGG | 0.388713 | 1_4:-27821295 | Msa0158480:CDS |
| ATGTTCTTGTTGTTGGGTCT+GGG | 0.391709 | 1_4:-27828661 | Msa0158480:CDS |
| CATTCAACTGGGTTTAAGAA+TGG | 0.393718 | 1_4:-27828704 | Msa0158480:CDS |
| CCTTCAATTTCAGGTACAAA+AGG | 0.400011 | 1_4:+27828755 | None:intergenic |
| CTATCAAGGAGAGGTTTCTA+TGG | 0.400558 | 1_4:-27821242 | Msa0158480:CDS |
| ACGGGGATGTCACGAATTAT+GGG | 0.428718 | 1_4:-27823007 | Msa0158480:CDS |
| TATATTGTGTTGGACTATCA+AGG | 0.438069 | 1_4:-27821256 | Msa0158480:CDS |
| ATTCAACTGGGTTTAAGAAT+GGG | 0.438492 | 1_4:-27828703 | Msa0158480:CDS |
| ATGAATAGGGTAACTTGGCT+TGG | 0.450552 | 1_4:+27821298 | None:intergenic |
| AAGGTTCCAACGTCAATAAT+AGG | 0.451735 | 1_4:+27822930 | None:intergenic |
| TTCGAGGATTATATAAGGAA+TGG | 0.455797 | 1_4:+27829102 | None:intergenic |
| TTCCAATGAATAGGGTAACT+TGG | 0.456789 | 1_4:+27821293 | None:intergenic |
| TTCTGGCATGGAAATTGCAT+TGG | 0.469456 | 1_4:-27828636 | Msa0158480:CDS |
| ATGAACATGTTCTTGTTGTT+GGG | 0.471420 | 1_4:-27828667 | Msa0158480:CDS |
| TACTTGACCTTCATATAAAA+GGG | 0.473078 | 1_4:+27822963 | None:intergenic |
| GCAAACCTTAAGCCACTTGT+GGG | 0.480163 | 1_4:+27821745 | None:intergenic |
| TGAATAGGGTAACTTGGCTT+GGG | 0.488661 | 1_4:+27821299 | None:intergenic |
| GGATTATATAAGGAATGGAT+TGG | 0.489614 | 1_4:+27829107 | None:intergenic |
| GAATACCATCATCATTCAAA+AGG | 0.492685 | 1_4:+27821321 | None:intergenic |
| TCTGATGAAGTATTTGTCAA+TGG | 0.510851 | 1_4:-27823072 | Msa0158480:CDS |
| CAAGGGGTATGCTGAATTTG+GGG | 0.511286 | 1_4:-27823100 | Msa0158480:CDS |
| TGGGGTTGGTAGGCCTAGTG+AGG | 0.512474 | 1_4:-27822988 | Msa0158480:CDS |
| ATATAAAAGGGACCCTCACT+AGG | 0.526447 | 1_4:+27822975 | None:intergenic |
| CTTCAATTTCAGGTACAAAA+GGG | 0.526666 | 1_4:+27828756 | None:intergenic |
| TGCAAACCTTAAGCCACTTG+TGG | 0.528385 | 1_4:+27821744 | None:intergenic |
| GGAATGTATGATGGAAAAGA+AGG | 0.532095 | 1_4:+27828977 | None:intergenic |
| AAGTTACCCTATTCATTGGA+AGG | 0.536623 | 1_4:-27821291 | Msa0158480:CDS |
| GTGGGTTGATCTCTTGAAGC+CGG | 0.536695 | 1_4:+27821763 | None:intergenic |
| GCTGAAATAGAATGCTTAAG+TGG | 0.538757 | 1_4:-27821845 | Msa0158480:CDS |
| ATGTATGATGGAAAAGAAGG+TGG | 0.552215 | 1_4:+27828980 | None:intergenic |
| GATGGAAAAGAAGGTGGGAA+TGG | 0.556044 | 1_4:+27828986 | None:intergenic |
| AGAGTGATAGTTGTTGGAGC+AGG | 0.568437 | 1_4:-27829166 | Msa0158480:CDS |
| TCACGAATTATGGGGTTGGT+AGG | 0.576228 | 1_4:-27822998 | Msa0158480:CDS |
| GTATTTGTCAATGGAGATGG+TGG | 0.579490 | 1_4:-27823063 | Msa0158480:CDS |
| TGGGTCTGGGAATTCTGGCA+TGG | 0.586713 | 1_4:-27828648 | Msa0158480:CDS |
| CGGGGATGTCACGAATTATG+GGG | 0.588744 | 1_4:-27823006 | Msa0158480:CDS |
| GGGGTTGGTAGGCCTAGTGA+GGG | 0.589928 | 1_4:-27822987 | Msa0158480:CDS |
| GGAAAGTGATTCATTCAACT+GGG | 0.594965 | 1_4:-27828715 | Msa0158480:CDS |
| TGTATGATGGAAAAGAAGGT+GGG | 0.596307 | 1_4:+27828981 | None:intergenic |
| AGTTACCCTATTCATTGGAA+GGG | 0.596925 | 1_4:-27821290 | Msa0158480:CDS |
| GAAGTATTTGTCAATGGAGA+TGG | 0.597497 | 1_4:-27823066 | Msa0158480:CDS |
| GCTGCTACTGAGAGACCAGA+AGG | 0.602816 | 1_4:+27829142 | None:intergenic |
| GAAGGTGGGAATGGTTTGTG+AGG | 0.606122 | 1_4:+27828995 | None:intergenic |
| TGTGTTGGACTATCAAGGAG+AGG | 0.616154 | 1_4:-27821251 | Msa0158480:CDS |
| GGAGATGGTGGATTTAGTGA+TGG | 0.618594 | 1_4:-27823051 | Msa0158480:CDS |
| GATGTCACGAATTATGGGGT+TGG | 0.629113 | 1_4:-27823002 | Msa0158480:CDS |
| GCATTGGATCTTATCAACCA+TGG | 0.635858 | 1_4:-27828620 | Msa0158480:CDS |
| AAGTATCCTATTATTGACGT+TGG | 0.642218 | 1_4:-27822936 | Msa0158480:CDS |
| TCAAGAGATCAACCCACAAG+TGG | 0.648193 | 1_4:-27821757 | Msa0158480:CDS |
| GCTTAGTAAAATGGTTTACG+GGG | 0.650434 | 1_4:-27823024 | Msa0158480:CDS |
| CTGCTACTGAGAGACCAGAA+GGG | 0.656151 | 1_4:+27829143 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAATAAATATATAATTGA+CGG | - | chr1_4:27827073-27827092 | Msa0158480:intron | 10.0% |
| !! | AAAATAAATAATATAAATGC+AGG | - | chr1_4:27827230-27827249 | Msa0158480:intron | 10.0% |
| !!! | TTGATTTTAATGATAATTTA+TGG | + | chr1_4:27827584-27827603 | None:intergenic | 10.0% |
| !!! | TATATTTTTCATATCATTAA+AGG | - | chr1_4:27828106-27828125 | Msa0158480:intron | 10.0% |
| !! | AAAAAAAAAAAAACATGATA+AGG | + | chr1_4:27828852-27828871 | None:intergenic | 10.0% |
| !!! | TAAACTAATTAATTATCTTT+TGG | - | chr1_4:27829007-27829026 | Msa0158480:CDS | 10.0% |
| !!! | TATTGTAAAAACTTTTCTTT+AGG | + | chr1_4:27821412-27821431 | None:intergenic | 15.0% |
| !! | AAAACAAAACAAAAAACATT+CGG | + | chr1_4:27821825-27821844 | None:intergenic | 15.0% |
| !!! | AGTAAGATTTTATATAGAAT+TGG | - | chr1_4:27826981-27827000 | Msa0158480:intron | 15.0% |
| !!! | TTTATTCTAAAAAAAGATTG+TGG | + | chr1_4:27827062-27827081 | None:intergenic | 15.0% |
| !! | AGAATAAATATATAATTGAC+GGG | - | chr1_4:27827074-27827093 | Msa0158480:intron | 15.0% |
| !! | ATGTATTCAAGTATAATTTA+AGG | + | chr1_4:27827616-27827635 | None:intergenic | 15.0% |
| !! | AAAATAAAGGATTAAATTGA+TGG | - | chr1_4:27827657-27827676 | Msa0158480:intron | 15.0% |
| !!! | TATTTGACTTTAATAGTTTA+AGG | - | chr1_4:27827704-27827723 | Msa0158480:intron | 15.0% |
| !! | AACAAATTTATTTAAGTGAA+AGG | - | chr1_4:27828241-27828260 | Msa0158480:intron | 15.0% |
| !!! | ATATCATTTTACTAAAAAGA+TGG | - | chr1_4:27828288-27828307 | Msa0158480:intron | 15.0% |
| !!! | CAAAAAAGAATAGTTTTTTT+AGG | - | chr1_4:27828874-27828893 | Msa0158480:intron | 15.0% |
| !!! | TAATTAATTATCTTTTGGTA+GGG | - | chr1_4:27829012-27829031 | Msa0158480:CDS | 15.0% |
| !! | AAAGAAACATATCAAACTAT+AGG | - | chr1_4:27821998-27822017 | Msa0158480:intron | 20.0% |
| !! | TGATTATACTCAAATATTTC+TGG | - | chr1_4:27822099-27822118 | Msa0158480:intron | 20.0% |
| !!! | AGATTTTATATAGAATTGGA+CGG | - | chr1_4:27826985-27827004 | Msa0158480:intron | 20.0% |
| !! | TATACTTGAATACATCAATT+TGG | - | chr1_4:27827621-27827640 | Msa0158480:intron | 20.0% |
| !! | TCCATAAACAAGTAAAATAA+AGG | - | chr1_4:27827644-27827663 | Msa0158480:intron | 20.0% |
| !!! | TCCTTTATTTTACTTGTTTA+TGG | + | chr1_4:27827648-27827667 | None:intergenic | 20.0% |
| !!! | TTCAGAAGATTTTTTTTTGA+GGG | + | chr1_4:27827854-27827873 | None:intergenic | 20.0% |
| !!! | TTTCAGAAGATTTTTTTTTG+AGG | + | chr1_4:27827855-27827874 | None:intergenic | 20.0% |
| !! | AGAATGACATATATTTCAAT+AGG | + | chr1_4:27827968-27827987 | None:intergenic | 20.0% |
| !! | ATTGAAATATATGTCATTCT+AGG | - | chr1_4:27827968-27827987 | Msa0158480:intron | 20.0% |
| !! | TACCTAAAATAACATTTAGA+TGG | - | chr1_4:27828202-27828221 | Msa0158480:intron | 20.0% |
| !! | ACCTAAAATAACATTTAGAT+GGG | - | chr1_4:27828203-27828222 | Msa0158480:intron | 20.0% |
| !! | TAATGTATGTTACATGAAAA+TGG | - | chr1_4:27828922-27828941 | Msa0158480:intron | 20.0% |
| !! | AATGTATGTTACATGAAAAT+GGG | - | chr1_4:27828923-27828942 | Msa0158480:intron | 20.0% |
| !! | AATATACGTCAAAGTATATA+TGG | + | chr1_4:27828975-27828994 | None:intergenic | 20.0% |
| !!! | CTAATTAATTATCTTTTGGT+AGG | - | chr1_4:27829011-27829030 | Msa0158480:CDS | 20.0% |
| !! | AAAAATGGTTTATATTGTGT+TGG | - | chr1_4:27829099-27829118 | Msa0158480:CDS | 20.0% |
| !!! | AAAATTGTTTTGCTTCACTA+TGG | - | chr1_4:27821290-27821309 | Msa0158480:CDS | 25.0% |
| !!! | TTTTCTTTAGGAATGTATGA+TGG | + | chr1_4:27821400-27821419 | None:intergenic | 25.0% |
| ! | TTTGATGTGTGTATCTTAAA+AGG | + | chr1_4:27821848-27821867 | None:intergenic | 25.0% |
| !!! | AACATGTCGAATGATTTTTT+TGG | - | chr1_4:27821974-27821993 | Msa0158480:intron | 25.0% |
| !! | TCAACAAAAAGGTTTTTACT+CGG | + | chr1_4:27822031-27822050 | None:intergenic | 25.0% |
| !! | TCTTTATCTTGTTTATTCCT+TGG | + | chr1_4:27822309-27822328 | None:intergenic | 25.0% |
| !! | TTTTAGATACTAAAGGTTGA+GGG | + | chr1_4:27822814-27822833 | None:intergenic | 25.0% |
| !!! | TTTAGGGTTTTAGATACTAA+AGG | + | chr1_4:27822821-27822840 | None:intergenic | 25.0% |
| !! | CTTTTCCAAATCTTCAATTT+TGG | - | chr1_4:27823133-27823152 | Msa0158480:intron | 25.0% |
| ! | TGAATCCAAAATTGAAGATT+TGG | + | chr1_4:27823141-27823160 | None:intergenic | 25.0% |
| !! | TCTTTATCTTGTTTATTCCT+TGG | + | chr1_4:27822309-27822328 | None:intergenic | 25.0% |
| !! | TTTTAGATACTAAAGGTTGA+GGG | + | chr1_4:27822814-27822833 | None:intergenic | 25.0% |
| !!! | TTTAGGGTTTTAGATACTAA+AGG | + | chr1_4:27822821-27822840 | None:intergenic | 25.0% |
| !! | CTTTTCCAAATCTTCAATTT+TGG | - | chr1_4:27823133-27823152 | Msa0158480:intron | 25.0% |
| !! | TCTTTATCTTGTTTATTCCT+TGG | + | chr1_4:27822309-27822328 | None:intergenic | 25.0% |
| !! | TTTTAGATACTAAAGGTTGA+GGG | + | chr1_4:27822814-27822833 | None:intergenic | 25.0% |
| !!! | TTTAGGGTTTTAGATACTAA+AGG | + | chr1_4:27822821-27822840 | None:intergenic | 25.0% |
| !! | CTTTTCCAAATCTTCAATTT+TGG | - | chr1_4:27823133-27823152 | Msa0158480:intron | 25.0% |
| ! | ATGCTTAGTAAAATGGTTTA+CGG | - | chr1_4:27827339-27827358 | Msa0158480:intron | 25.0% |
| ! | TACTTGACCTTCATATAAAA+GGG | + | chr1_4:27827405-27827424 | None:intergenic | 25.0% |
| !! | TTTTATATGAAGGTCAAGTA+CGG | - | chr1_4:27827405-27827424 | Msa0158480:intron | 25.0% |
| !! | AACCATATTAGGCAAATTTT+AGG | + | chr1_4:27827552-27827571 | None:intergenic | 25.0% |
| !!! | ATCTTCTCTGTCTTTTTTTA+AGG | - | chr1_4:27827896-27827915 | Msa0158480:intron | 25.0% |
| !! | AAATATATGTCATTCTAGGA+AGG | - | chr1_4:27827972-27827991 | Msa0158480:intron | 25.0% |
| ! | CCTAAAATAACATTTAGATG+GGG | - | chr1_4:27828204-27828223 | Msa0158480:intron | 25.0% |
| ! | AGGTTATCTAACTATAAACA+AGG | - | chr1_4:27828261-27828280 | Msa0158480:intron | 25.0% |
| !! | GAAAAGTGCAAATATAATTG+TGG | - | chr1_4:27828440-27828459 | Msa0158480:intron | 25.0% |
| ! | ATTGTGTTATGTGTTATGTT+AGG | - | chr1_4:27828489-27828508 | Msa0158480:intron | 25.0% |
| !! | TTATGTGTTATGTTAGGTTT+TGG | - | chr1_4:27828495-27828514 | Msa0158480:intron | 25.0% |
| !! | ATATATGGTCACATTTCTTT+TGG | + | chr1_4:27828960-27828979 | None:intergenic | 25.0% |
| AATGAAAGAGTGATAGTTGT+TGG | - | chr1_4:27821193-27821212 | Msa0158480:CDS | 30.0% | |
| GGATTATATAAGGAATGGAT+TGG | + | chr1_4:27821261-27821280 | None:intergenic | 30.0% | |
| TTCGAGGATTATATAAGGAA+TGG | + | chr1_4:27821266-27821285 | None:intergenic | 30.0% | |
| TCTCTTTCGAGGATTATATA+AGG | + | chr1_4:27821271-27821290 | None:intergenic | 30.0% | |
| ! | CAAAACAATTTTCTCTTTCG+AGG | + | chr1_4:27821282-27821301 | None:intergenic | 30.0% |
| ! | CTTCAATTTCAGGTACAAAA+GGG | + | chr1_4:27821612-27821631 | None:intergenic | 30.0% |
| ! | CTTTTGTACCTGAAATTGAA+GGG | - | chr1_4:27821611-27821630 | Msa0158480:intron | 30.0% |
| ATTCAACTGGGTTTAAGAAT+GGG | - | chr1_4:27821662-27821681 | Msa0158480:intron | 30.0% | |
| !! | ATGAACATGTTCTTGTTGTT+GGG | - | chr1_4:27821698-27821717 | Msa0158480:intron | 30.0% |
| GATTACAAATACAGACTTGT+AGG | + | chr1_4:27821921-27821940 | None:intergenic | 30.0% | |
| TCGTTTCATCATCAACAAAA+AGG | + | chr1_4:27822042-27822061 | None:intergenic | 30.0% | |
| !! | TTGTTGCTTGTGGTTAATTT+TGG | + | chr1_4:27822251-27822270 | None:intergenic | 30.0% |
| ! | TATCTTGTTTATTCCTTGGT+TGG | + | chr1_4:27822305-27822324 | None:intergenic | 30.0% |
| TTGTAAGAACTCATTGATAG+TGG | + | chr1_4:27822419-27822438 | None:intergenic | 30.0% | |
| GAAACAATTGTAAACACCTT+GGG | + | chr1_4:27822558-27822577 | None:intergenic | 30.0% | |
| TTAGTGAAATCAAAGGCTAA+GGG | + | chr1_4:27822616-27822635 | None:intergenic | 30.0% | |
| AAGATCCTTAGTGAAATCAA+AGG | + | chr1_4:27822623-27822642 | None:intergenic | 30.0% | |
| !! | GTTTTAGATACTAAAGGTTG+AGG | + | chr1_4:27822815-27822834 | None:intergenic | 30.0% |
| ! | ATTCTTTGACCCATTTTGTT+GGG | + | chr1_4:27822883-27822902 | None:intergenic | 30.0% |
| !!! | TCATCATCATTTTAGAGTCA+AGG | + | chr1_4:27823181-27823200 | None:intergenic | 30.0% |
| !! | TTGTTGCTTGTGGTTAATTT+TGG | + | chr1_4:27822251-27822270 | None:intergenic | 30.0% |
| ! | TATCTTGTTTATTCCTTGGT+TGG | + | chr1_4:27822305-27822324 | None:intergenic | 30.0% |
| TTGTAAGAACTCATTGATAG+TGG | + | chr1_4:27822419-27822438 | None:intergenic | 30.0% | |
| GAAACAATTGTAAACACCTT+GGG | + | chr1_4:27822558-27822577 | None:intergenic | 30.0% | |
| TTAGTGAAATCAAAGGCTAA+GGG | + | chr1_4:27822616-27822635 | None:intergenic | 30.0% | |
| AAGATCCTTAGTGAAATCAA+AGG | + | chr1_4:27822623-27822642 | None:intergenic | 30.0% | |
| !! | GTTTTAGATACTAAAGGTTG+AGG | + | chr1_4:27822815-27822834 | None:intergenic | 30.0% |
| ! | ATTCTTTGACCCATTTTGTT+GGG | + | chr1_4:27822883-27822902 | None:intergenic | 30.0% |
| TGACTCCAAAATTGAAGATT+TGG | + | chr1_4:27825046-27825065 | None:intergenic | 30.0% | |
| !!! | TCATCATCATTTTAGAGTCA+AGG | + | chr1_4:27823181-27823200 | None:intergenic | 30.0% |
| !! | TTGTTGCTTGTGGTTAATTT+TGG | + | chr1_4:27822251-27822270 | None:intergenic | 30.0% |
| ! | TATCTTGTTTATTCCTTGGT+TGG | + | chr1_4:27822305-27822324 | None:intergenic | 30.0% |
| TTGTAAGAACTCATTGATAG+TGG | + | chr1_4:27822419-27822438 | None:intergenic | 30.0% | |
| GAAACAATTGTAAACACCTT+GGG | + | chr1_4:27822558-27822577 | None:intergenic | 30.0% | |
| TTAGTGAAATCAAAGGCTAA+GGG | + | chr1_4:27822616-27822635 | None:intergenic | 30.0% | |
| AAGATCCTTAGTGAAATCAA+AGG | + | chr1_4:27822623-27822642 | None:intergenic | 30.0% | |
| !! | GTTTTAGATACTAAAGGTTG+AGG | + | chr1_4:27822815-27822834 | None:intergenic | 30.0% |
| ! | ATTCTTTGACCCATTTTGTT+GGG | + | chr1_4:27822883-27822902 | None:intergenic | 30.0% |
| TGACTCCAAAATTGAAGATT+TGG | + | chr1_4:27825046-27825065 | None:intergenic | 30.0% | |
| TAGAATTGGACGGATATATA+TGG | - | chr1_4:27826995-27827014 | Msa0158480:intron | 30.0% | |
| AGAATTGGACGGATATATAT+GGG | - | chr1_4:27826996-27827015 | Msa0158480:intron | 30.0% | |
| ! | TCTGATGAAGTATTTGTCAA+TGG | - | chr1_4:27827293-27827312 | Msa0158480:intron | 30.0% |
| TGCTTAGTAAAATGGTTTAC+GGG | - | chr1_4:27827340-27827359 | Msa0158480:intron | 30.0% | |
| GTACTTGACCTTCATATAAA+AGG | + | chr1_4:27827406-27827425 | None:intergenic | 30.0% | |
| AAGTATCCTATTATTGACGT+TGG | - | chr1_4:27827429-27827448 | Msa0158480:intron | 30.0% | |
| ! | TCGAGACTTAATTTTGTGAA+AGG | + | chr1_4:27827457-27827476 | None:intergenic | 30.0% |
| AATTAAGTCTCGAGAGTTAA+AGG | - | chr1_4:27827464-27827483 | Msa0158480:intron | 30.0% | |
| ACGTTAGAGATAATTGACAT+TGG | - | chr1_4:27827488-27827507 | Msa0158480:intron | 30.0% | |
| ! | ATAATTGACATTGGTTGCTT+TGG | - | chr1_4:27827497-27827516 | Msa0158480:intron | 30.0% |
| CACCTAAAATTTGCCTAATA+TGG | - | chr1_4:27827547-27827566 | Msa0158480:intron | 30.0% | |
| ! | GGAAAGTTTGAAACCATATT+AGG | + | chr1_4:27827563-27827582 | None:intergenic | 30.0% |
| TAATAGTTTAAGGACCAAAG+TGG | - | chr1_4:27827714-27827733 | Msa0158480:intron | 30.0% | |
| !!! | CCCCATCTAAATGTTATTTT+AGG | + | chr1_4:27828207-27828226 | None:intergenic | 30.0% |
| AAGAATGTCCTCTTCAAAAA+TGG | - | chr1_4:27828544-27828563 | Msa0158480:intron | 30.0% | |
| GAATAGATCAATATCAGCAA+CGG | - | chr1_4:27828742-27828761 | Msa0158480:CDS | 30.0% | |
| ! | GATTACCTTTTGAATGATGA+TGG | - | chr1_4:27829039-27829058 | Msa0158480:CDS | 30.0% |
| GAATACCATCATCATTCAAA+AGG | + | chr1_4:27829047-27829066 | None:intergenic | 30.0% | |
| ! | TTTTTCCCTTCCAATGAATA+GGG | + | chr1_4:27829083-27829102 | None:intergenic | 30.0% |
| !!! | TTTTTTCCCTTCCAATGAAT+AGG | + | chr1_4:27829084-27829103 | None:intergenic | 30.0% |
| ATTCATTGGAAGGGAAAAAA+TGG | - | chr1_4:27829084-27829103 | Msa0158480:CDS | 30.0% | |
| TATATTGTGTTGGACTATCA+AGG | - | chr1_4:27829109-27829128 | Msa0158480:CDS | 30.0% | |
| !!! | GCTCGCAAAATTGTTTTTTG+AGG | + | chr1_4:27821348-27821367 | None:intergenic | 35.0% |
| ! | TGTATGATGGAAAAGAAGGT+GGG | + | chr1_4:27821387-27821406 | None:intergenic | 35.0% |
| ! | ATGTATGATGGAAAAGAAGG+TGG | + | chr1_4:27821388-27821407 | None:intergenic | 35.0% |
| ! | GGAATGTATGATGGAAAAGA+AGG | + | chr1_4:27821391-27821410 | None:intergenic | 35.0% |
| GAGAATGCAAAGTATGATGA+AGG | - | chr1_4:27821487-27821506 | Msa0158480:intron | 35.0% | |
| !! | ATGATGAAGGTTCTGAGAAA+TGG | - | chr1_4:27821500-27821519 | Msa0158480:intron | 35.0% |
| AAGGCTAAGAATAAGGATTC+TGG | - | chr1_4:27821529-27821548 | Msa0158480:intron | 35.0% | |
| TAAGAATAAGGATTCTGGTG+AGG | - | chr1_4:27821534-27821553 | Msa0158480:intron | 35.0% | |
| ! | GGAATATGAAGGAAGGTTTT+TGG | - | chr1_4:27821561-27821580 | Msa0158480:intron | 35.0% |
| ! | CCTTCAATTTCAGGTACAAA+AGG | + | chr1_4:27821613-27821632 | None:intergenic | 35.0% |
| ! | CCTTTTGTACCTGAAATTGA+AGG | - | chr1_4:27821610-27821629 | Msa0158480:intron | 35.0% |
| ! | AAGGGTTGAAGAGTTTTACT+GGG | - | chr1_4:27821629-27821648 | Msa0158480:intron | 35.0% |
| GGAAAGTGATTCATTCAACT+GGG | - | chr1_4:27821650-27821669 | Msa0158480:intron | 35.0% | |
| CATTCAACTGGGTTTAAGAA+TGG | - | chr1_4:27821661-27821680 | Msa0158480:intron | 35.0% | |
| ! | GATGAACATGTTCTTGTTGT+TGG | - | chr1_4:27821697-27821716 | Msa0158480:intron | 35.0% |
| ! | TAAATTTGAGACAGAGCACA+TGG | + | chr1_4:27821896-27821915 | None:intergenic | 35.0% |
| ATTGGTGTGAAATTTGAGTC+CGG | + | chr1_4:27822185-27822204 | None:intergenic | 35.0% | |
| ! | CCACACATCATAGTTTGTAT+TGG | + | chr1_4:27822203-27822222 | None:intergenic | 35.0% |
| CCAATACAAACTATGATGTG+TGG | - | chr1_4:27822200-27822219 | Msa0158480:intron | 35.0% | |
| !! | TTGTGGTTAATTTTGGTCGT+TGG | + | chr1_4:27822244-27822263 | None:intergenic | 35.0% |
| ! | TGGTTTATAGTTGTTGCTTG+TGG | + | chr1_4:27822261-27822280 | None:intergenic | 35.0% |
| TTTATTCCTTGGTTGGATTG+TGG | + | chr1_4:27822298-27822317 | None:intergenic | 35.0% | |
| !! | AGAACTCATTGATAGTGGAT+TGG | + | chr1_4:27822414-27822433 | None:intergenic | 35.0% |
| GGGAAAATGGGTAGAAATTA+GGG | + | chr1_4:27822495-27822514 | None:intergenic | 35.0% | |
| TGGGAAAATGGGTAGAAATT+AGG | + | chr1_4:27822496-27822515 | None:intergenic | 35.0% | |
| ATTGGTGAGATTGGGAAAAT+GGG | + | chr1_4:27822507-27822526 | None:intergenic | 35.0% | |
| TCTTGTTCATTGGTGAGATT+GGG | + | chr1_4:27822515-27822534 | None:intergenic | 35.0% | |
| ! | TTCATGAGTGTCTTGTTCAT+TGG | + | chr1_4:27822525-27822544 | None:intergenic | 35.0% |
| GGAAACAATTGTAAACACCT+TGG | + | chr1_4:27822559-27822578 | None:intergenic | 35.0% | |
| CTTAGTGAAATCAAAGGCTA+AGG | + | chr1_4:27822617-27822636 | None:intergenic | 35.0% | |
| ! | CTTAGCCTTTGATTTCACTA+AGG | - | chr1_4:27822615-27822634 | Msa0158480:intron | 35.0% |
| ! | TCACTAAGGATCTTCTCTTT+TGG | - | chr1_4:27822629-27822648 | Msa0158480:intron | 35.0% |
| ! | GAGTCTTTTGTAAGGAACAT+GGG | + | chr1_4:27822669-27822688 | None:intergenic | 35.0% |
| ! | AGAGTCTTTTGTAAGGAACA+TGG | + | chr1_4:27822670-27822689 | None:intergenic | 35.0% |
| ! | TGAGTGAAGAGTCTTTTGTA+AGG | + | chr1_4:27822677-27822696 | None:intergenic | 35.0% |
| AATCTTGGAGAACCAAAAGA+GGG | + | chr1_4:27822759-27822778 | None:intergenic | 35.0% | |
| AAGCTTCAAGATGTGAATCT+TGG | + | chr1_4:27822774-27822793 | None:intergenic | 35.0% | |
| ! | CATTCTTTGACCCATTTTGT+TGG | + | chr1_4:27822884-27822903 | None:intergenic | 35.0% |
| !!! | TCATCATTTTAGAGTCAAGG+TGG | + | chr1_4:27823178-27823197 | None:intergenic | 35.0% |
| AATAGATCAAGGCATGGTTA+AGG | + | chr1_4:27823232-27823251 | None:intergenic | 35.0% | |
| CCTAAAAATCCTAGTGTAGT+TGG | + | chr1_4:27823468-27823487 | None:intergenic | 35.0% | |
| ! | CCAACTACACTAGGATTTTT+AGG | - | chr1_4:27823465-27823484 | Msa0158480:intron | 35.0% |
| ATGTGAATTCTTCAAGAGGA+CGG | + | chr1_4:27823639-27823658 | None:intergenic | 35.0% | |
| ATTGGTGTGAAATTTGAGTC+CGG | + | chr1_4:27822185-27822204 | None:intergenic | 35.0% | |
| ! | CCACACATCATAGTTTGTAT+TGG | + | chr1_4:27822203-27822222 | None:intergenic | 35.0% |
| CCAATACAAACTATGATGTG+TGG | - | chr1_4:27822200-27822219 | Msa0158480:intron | 35.0% | |
| !! | TTGTGGTTAATTTTGGTCGT+TGG | + | chr1_4:27822244-27822263 | None:intergenic | 35.0% |
| ! | TGGTTTATAGTTGTTGCTTG+TGG | + | chr1_4:27822261-27822280 | None:intergenic | 35.0% |
| TTTATTCCTTGGTTGGATTG+TGG | + | chr1_4:27822298-27822317 | None:intergenic | 35.0% | |
| CAAGAAATATTCACCCAGTT+CGG | - | chr1_4:27824257-27824276 | Msa0158480:intron | 35.0% | |
| !! | AGAACTCATTGATAGTGGAT+TGG | + | chr1_4:27822414-27822433 | None:intergenic | 35.0% |
| GGGAAAATGGGTAGAAATTA+GGG | + | chr1_4:27822495-27822514 | None:intergenic | 35.0% | |
| TGGGAAAATGGGTAGAAATT+AGG | + | chr1_4:27822496-27822515 | None:intergenic | 35.0% | |
| ATTGGTGAGATTGGGAAAAT+GGG | + | chr1_4:27822507-27822526 | None:intergenic | 35.0% | |
| TCTTGTTCATTGGTGAGATT+GGG | + | chr1_4:27822515-27822534 | None:intergenic | 35.0% | |
| ! | TTCATGAGTGTCTTGTTCAT+TGG | + | chr1_4:27822525-27822544 | None:intergenic | 35.0% |
| GGAAACAATTGTAAACACCT+TGG | + | chr1_4:27822559-27822578 | None:intergenic | 35.0% | |
| CTTAGTGAAATCAAAGGCTA+AGG | + | chr1_4:27822617-27822636 | None:intergenic | 35.0% | |
| ! | CTTAGCCTTTGATTTCACTA+AGG | - | chr1_4:27822615-27822634 | Msa0158480:intron | 35.0% |
| ! | TCACTAAGGATCTTCTCTTT+TGG | - | chr1_4:27822629-27822648 | Msa0158480:intron | 35.0% |
| ! | GAGTCTTTTGTAAGCAACAT+GGG | + | chr1_4:27824574-27824593 | None:intergenic | 35.0% |
| ! | AGAGTCTTTTGTAAGCAACA+TGG | + | chr1_4:27824575-27824594 | None:intergenic | 35.0% |
| AATCTTGGAGAACCAAAAGA+GGG | + | chr1_4:27822759-27822778 | None:intergenic | 35.0% | |
| AAGCTTCAAGATGTGAATCT+TGG | + | chr1_4:27822774-27822793 | None:intergenic | 35.0% | |
| ! | CATTCTTTGACCCATTTTGT+TGG | + | chr1_4:27822884-27822903 | None:intergenic | 35.0% |
| !!! | TCATCATTTTAGAGTCAAGG+TGG | + | chr1_4:27823178-27823197 | None:intergenic | 35.0% |
| AATAGATCAAGGCATGGTTA+AGG | + | chr1_4:27823232-27823251 | None:intergenic | 35.0% | |
| CCTAAAAATCCTAGTGTAGT+TGG | + | chr1_4:27823468-27823487 | None:intergenic | 35.0% | |
| ! | CCAACTACACTAGGATTTTT+AGG | - | chr1_4:27823465-27823484 | Msa0158480:intron | 35.0% |
| ATGTGAATTCTTCAAGAGGA+CGG | + | chr1_4:27823639-27823658 | None:intergenic | 35.0% | |
| ATTGGTGTGAAATTTGAGTC+CGG | + | chr1_4:27822185-27822204 | None:intergenic | 35.0% | |
| ! | CCACACATCATAGTTTGTAT+TGG | + | chr1_4:27822203-27822222 | None:intergenic | 35.0% |
| CCAATACAAACTATGATGTG+TGG | - | chr1_4:27822200-27822219 | Msa0158480:intron | 35.0% | |
| !! | TTGTGGTTAATTTTGGTCGT+TGG | + | chr1_4:27822244-27822263 | None:intergenic | 35.0% |
| ! | TGGTTTATAGTTGTTGCTTG+TGG | + | chr1_4:27822261-27822280 | None:intergenic | 35.0% |
| !! | TTGTGATTTTGCTATGCACT+TGG | + | chr1_4:27826092-27826111 | None:intergenic | 35.0% |
| !! | AGAACTCATTGATAGTGGAT+TGG | + | chr1_4:27822414-27822433 | None:intergenic | 35.0% |
| GGGAAAATGGGTAGAAATTA+GGG | + | chr1_4:27822495-27822514 | None:intergenic | 35.0% | |
| TGGGAAAATGGGTAGAAATT+AGG | + | chr1_4:27822496-27822515 | None:intergenic | 35.0% | |
| ATTGGTGAGATTGGGAAAAT+GGG | + | chr1_4:27822507-27822526 | None:intergenic | 35.0% | |
| TCTTGTTCATTGGTGAGATT+GGG | + | chr1_4:27822515-27822534 | None:intergenic | 35.0% | |
| ! | TTCATGAGTGTCTTGTTCAT+TGG | + | chr1_4:27822525-27822544 | None:intergenic | 35.0% |
| GGAAACAATTGTAAACACCT+TGG | + | chr1_4:27822559-27822578 | None:intergenic | 35.0% | |
| CTTAGTGAAATCAAAGGCTA+AGG | + | chr1_4:27822617-27822636 | None:intergenic | 35.0% | |
| ! | CTTAGCCTTTGATTTCACTA+AGG | - | chr1_4:27822615-27822634 | Msa0158480:intron | 35.0% |
| ! | TCACTAAGGATCTTCTCTTT+TGG | - | chr1_4:27822629-27822648 | Msa0158480:intron | 35.0% |
| ! | GAGTCTTTTGTAAGCAACAT+GGG | + | chr1_4:27824574-27824593 | None:intergenic | 35.0% |
| ! | AGAGTCTTTTGTAAGCAACA+TGG | + | chr1_4:27824575-27824594 | None:intergenic | 35.0% |
| AATCTTGGAGAACCAAAAGA+GGG | + | chr1_4:27822759-27822778 | None:intergenic | 35.0% | |
| AAGCTTCAAGATGTGAATCT+TGG | + | chr1_4:27822774-27822793 | None:intergenic | 35.0% | |
| ! | CATTCTTTGACCCATTTTGT+TGG | + | chr1_4:27822884-27822903 | None:intergenic | 35.0% |
| ! | GTTAGCTGTTGATTATACGT+AGG | - | chr1_4:27827148-27827167 | Msa0158480:intron | 35.0% |
| ! | GAAGTATTTGTCAATGGAGA+TGG | - | chr1_4:27827299-27827318 | Msa0158480:intron | 35.0% |
| ! | GATGGTGATGCTTAGTAAAA+TGG | - | chr1_4:27827332-27827351 | Msa0158480:intron | 35.0% |
| GCTTAGTAAAATGGTTTACG+GGG | - | chr1_4:27827341-27827360 | Msa0158480:intron | 35.0% | |
| AAGGTTCCAACGTCAATAAT+AGG | + | chr1_4:27827438-27827457 | None:intergenic | 35.0% | |
| GCTGAAATAGAATGCTTAAG+TGG | - | chr1_4:27828520-27828539 | Msa0158480:intron | 35.0% | |
| !! | GCAATTGACCATTTTTGAAG+AGG | + | chr1_4:27828555-27828574 | None:intergenic | 35.0% |
| ! | GACTCTATTATTTTCTGCAC+CGG | - | chr1_4:27828583-27828602 | Msa0158480:intron | 35.0% |
| TTCCAATGAATAGGGTAACT+TGG | + | chr1_4:27829075-27829094 | None:intergenic | 35.0% | |
| AAGTTACCCTATTCATTGGA+AGG | - | chr1_4:27829074-27829093 | Msa0158480:CDS | 35.0% | |
| AGTTACCCTATTCATTGGAA+GGG | - | chr1_4:27829075-27829094 | Msa0158480:CDS | 35.0% | |
| TCAACTGTTCTGTGATACAG+AGG | + | chr1_4:27821469-27821488 | None:intergenic | 40.0% | |
| !! | TGAAGGTTCTGAGAAATGGA+AGG | - | chr1_4:27821504-27821523 | Msa0158480:intron | 40.0% |
| ! | TTCTGAGAAATGGAAGGTGA+AGG | - | chr1_4:27821510-27821529 | Msa0158480:intron | 40.0% |
| GAAGGTGAAGGCTAAGAATA+AGG | - | chr1_4:27821522-27821541 | Msa0158480:intron | 40.0% | |
| AGGTTGAGGAATATGAAGGA+AGG | - | chr1_4:27821554-27821573 | Msa0158480:intron | 40.0% | |
| !!! | TGAAGGAAGGTTTTTGGTTG+TGG | - | chr1_4:27821567-27821586 | Msa0158480:intron | 40.0% |
| CTCTTCAACCCTTCAATTTC+AGG | + | chr1_4:27821622-27821641 | None:intergenic | 40.0% | |
| ! | GAAGGGTTGAAGAGTTTTAC+TGG | - | chr1_4:27821628-27821647 | Msa0158480:intron | 40.0% |
| GGGAAAGTGATTCATTCAAC+TGG | - | chr1_4:27821649-27821668 | Msa0158480:intron | 40.0% | |
| !! | ATGTTCTTGTTGTTGGGTCT+GGG | - | chr1_4:27821704-27821723 | Msa0158480:intron | 40.0% |
| TTCTGGCATGGAAATTGCAT+TGG | - | chr1_4:27821729-27821748 | Msa0158480:intron | 40.0% | |
| GCATTGGATCTTATCAACCA+TGG | - | chr1_4:27821745-27821764 | Msa0158480:intron | 40.0% | |
| !! | CGATTGAAGTTTTAGCACCA+TGG | + | chr1_4:27821765-27821784 | None:intergenic | 40.0% |
| ! | GTGGTAAGTGTTGTGAATTC+CGG | - | chr1_4:27822163-27822182 | Msa0158480:intron | 40.0% |
| ATGTGTGGAGCATGTATCAA+TGG | - | chr1_4:27822215-27822234 | Msa0158480:intron | 40.0% | |
| !! | TTGTGGTTTTGCTATGCACT+TGG | + | chr1_4:27822281-27822300 | None:intergenic | 40.0% |
| CAAGAAATGTTCACCCAGTT+CGG | - | chr1_4:27822351-27822370 | Msa0158480:intron | 40.0% | |
| CATTGGTGAGATTGGGAAAA+TGG | + | chr1_4:27822508-27822527 | None:intergenic | 40.0% | |
| ! | GTCTTGTTCATTGGTGAGAT+TGG | + | chr1_4:27822516-27822535 | None:intergenic | 40.0% |
| ! | CATGAATTTTCACTCTCCCA+AGG | - | chr1_4:27822539-27822558 | Msa0158480:intron | 40.0% |
| !!! | TAAGGGTTGGTTCTCTTTTG+GGG | + | chr1_4:27822599-27822618 | None:intergenic | 40.0% |
| !!! | CTAAGGGTTGGTTCTCTTTT+GGG | + | chr1_4:27822600-27822619 | None:intergenic | 40.0% |
| TGAAATCAAAGGCTAAGGGT+TGG | + | chr1_4:27822612-27822631 | None:intergenic | 40.0% | |
| !!! | AAAAAGGGTTGGTGCCTTTT+GGG | + | chr1_4:27822726-27822745 | None:intergenic | 40.0% |
| ATCTTGGAGAACCAAAAGAG+GGG | + | chr1_4:27822758-27822777 | None:intergenic | 40.0% | |
| GAATCTTGGAGAACCAAAAG+AGG | + | chr1_4:27822760-27822779 | None:intergenic | 40.0% | |
| ACTAAAGGTTGAGGGTCTTT+GGG | + | chr1_4:27822806-27822825 | None:intergenic | 40.0% | |
| TACTAAAGGTTGAGGGTCTT+TGG | + | chr1_4:27822807-27822826 | None:intergenic | 40.0% | |
| ! | ACCAAAGGAGGGAACTTTTA+GGG | + | chr1_4:27822837-27822856 | None:intergenic | 40.0% |
| ! | AACCAAAGGAGGGAACTTTT+AGG | + | chr1_4:27822838-27822857 | None:intergenic | 40.0% |
| ATCTCATGGAAACCAAAGGA+GGG | + | chr1_4:27822848-27822867 | None:intergenic | 40.0% | |
| AATCTCATGGAAACCAAAGG+AGG | + | chr1_4:27822849-27822868 | None:intergenic | 40.0% | |
| GTGAATCTCATGGAAACCAA+AGG | + | chr1_4:27822852-27822871 | None:intergenic | 40.0% | |
| ACCAAGCTTACCCAACAAAA+TGG | - | chr1_4:27822870-27822889 | Msa0158480:intron | 40.0% | |
| CCAAGCTTACCCAACAAAAT+GGG | - | chr1_4:27822871-27822890 | Msa0158480:intron | 40.0% | |
| ! | GGAAAACGTGACACGATTTT+CGG | + | chr1_4:27823022-27823041 | None:intergenic | 40.0% |
| ! | GGAAAACGTGACACGATTTT+GGG | + | chr1_4:27823022-27823041 | None:intergenic | 40.0% |
| GAATGCATGTTTGTCTTGGA+GGG | + | chr1_4:27823064-27823083 | None:intergenic | 40.0% | |
| CTCCAAGACAAACATGCATT+CGG | - | chr1_4:27823063-27823082 | Msa0158480:CDS | 40.0% | |
| TGAAGAAACGTGACACGATT+TGG | + | chr1_4:27823113-27823132 | None:intergenic | 40.0% | |
| ATGGTAGTCGATGGTTAAAG+TGG | + | chr1_4:27823206-27823225 | None:intergenic | 40.0% | |
| TTAAGGAGAATGGTAGTCGA+TGG | + | chr1_4:27823215-27823234 | None:intergenic | 40.0% | |
| TTGAGGAATAGATCAAGGCA+TGG | + | chr1_4:27823238-27823257 | None:intergenic | 40.0% | |
| GTGTCTTGAGGAATAGATCA+AGG | + | chr1_4:27823243-27823262 | None:intergenic | 40.0% | |
| !! | TTGATTGGTGTTGTGTCTTG+AGG | + | chr1_4:27823255-27823274 | None:intergenic | 40.0% |
| ! | GCAAGTTGAAGAATCAGACT+TGG | + | chr1_4:27823357-27823376 | None:intergenic | 40.0% |
| GTGGAACTACAAAGTGTAGT+TGG | + | chr1_4:27823382-27823401 | None:intergenic | 40.0% | |
| GAGGTAAAGGTGAAATCTTG+TGG | + | chr1_4:27823401-27823420 | None:intergenic | 40.0% | |
| ACCTTTACCTCTTCAAACCT+CGG | - | chr1_4:27823410-27823429 | Msa0158480:intron | 40.0% | |
| ATTGGAGGCAAGTGAATCTT+CGG | + | chr1_4:27823550-27823569 | None:intergenic | 40.0% | |
| AAAAGGCCAATGGTAATTGG+AGG | + | chr1_4:27823565-27823584 | None:intergenic | 40.0% | |
| !!! | CAATTACCATTGGCCTTTTC+CGG | - | chr1_4:27823566-27823585 | Msa0158480:intron | 40.0% |
| GAGCATGTGAATTCTTCAAG+AGG | + | chr1_4:27823643-27823662 | None:intergenic | 40.0% | |
| GTGATGTGTGTGTTCTCAAT+GGG | + | chr1_4:27823852-27823871 | None:intergenic | 40.0% | |
| ! | TCATAATGGTAGTGTCATGG+CGG | + | chr1_4:27823874-27823893 | None:intergenic | 40.0% |
| ! | AGGTCATAATGGTAGTGTCA+TGG | + | chr1_4:27823877-27823896 | None:intergenic | 40.0% |
| AGAAGGTAAAGTGTGAAGAG+AGG | + | chr1_4:27823900-27823919 | None:intergenic | 40.0% | |
| TTACCTTCTTCGATTGTGCT+AGG | - | chr1_4:27823911-27823930 | Msa0158480:intron | 40.0% | |
| !! | TATGGAAGCATTGAAGGTTG+AGG | + | chr1_4:27823953-27823972 | None:intergenic | 40.0% |
| !! | GAAGTGTATGGAAGCATTGA+AGG | + | chr1_4:27823959-27823978 | None:intergenic | 40.0% |
| ! | CATGGTTCAATGGAAGTGTA+TGG | + | chr1_4:27823971-27823990 | None:intergenic | 40.0% |
| CAAAGGTTACATCTTGGAGA+TGG | + | chr1_4:27824001-27824020 | None:intergenic | 40.0% | |
| CATCTCCAAGATGTAACCTT+TGG | - | chr1_4:27823999-27824018 | Msa0158480:intron | 40.0% | |
| AGTCCGGAATTCACAACAAT+TGG | + | chr1_4:27824075-27824094 | None:intergenic | 40.0% | |
| ATGTGTGGAGCAAGTATCAA+TGG | - | chr1_4:27824121-27824140 | Msa0158480:intron | 40.0% | |
| !! | TTGTGGTTTTGCTATGCACT+TGG | + | chr1_4:27822281-27822300 | None:intergenic | 40.0% |
| CGAACTGGGTGAATATTTCT+TGG | + | chr1_4:27824259-27824278 | None:intergenic | 40.0% | |
| CATTGGTGAGATTGGGAAAA+TGG | + | chr1_4:27822508-27822527 | None:intergenic | 40.0% | |
| ! | GTCTTGTTCATTGGTGAGAT+TGG | + | chr1_4:27822516-27822535 | None:intergenic | 40.0% |
| ! | CATGAATTTTCACTCTCCCA+AGG | - | chr1_4:27822539-27822558 | Msa0158480:intron | 40.0% |
| !!! | TAAGGGTTGGTTCTCTTTTG+GGG | + | chr1_4:27822599-27822618 | None:intergenic | 40.0% |
| !!! | CTAAGGGTTGGTTCTCTTTT+GGG | + | chr1_4:27822600-27822619 | None:intergenic | 40.0% |
| TGAAATCAAAGGCTAAGGGT+TGG | + | chr1_4:27822612-27822631 | None:intergenic | 40.0% | |
| !!! | AAAAAGGGTTGGTGCCTTTT+GGG | + | chr1_4:27822726-27822745 | None:intergenic | 40.0% |
| ATCTTGGAGAACCAAAAGAG+GGG | + | chr1_4:27822758-27822777 | None:intergenic | 40.0% | |
| GAATCTTGGAGAACCAAAAG+AGG | + | chr1_4:27822760-27822779 | None:intergenic | 40.0% | |
| ACTAAAGGTTGAGGGTCTTT+GGG | + | chr1_4:27822806-27822825 | None:intergenic | 40.0% | |
| TACTAAAGGTTGAGGGTCTT+TGG | + | chr1_4:27822807-27822826 | None:intergenic | 40.0% | |
| ! | ACCAAAGGAGGGAACTTTTA+GGG | + | chr1_4:27822837-27822856 | None:intergenic | 40.0% |
| ! | AACCAAAGGAGGGAACTTTT+AGG | + | chr1_4:27822838-27822857 | None:intergenic | 40.0% |
| ATCTCATGGAAACCAAAGGA+GGG | + | chr1_4:27822848-27822867 | None:intergenic | 40.0% | |
| AATCTCATGGAAACCAAAGG+AGG | + | chr1_4:27822849-27822868 | None:intergenic | 40.0% | |
| GTGAATCTCATGGAAACCAA+AGG | + | chr1_4:27822852-27822871 | None:intergenic | 40.0% | |
| ACCAAGCTTACCCAACAAAA+TGG | - | chr1_4:27822870-27822889 | Msa0158480:intron | 40.0% | |
| CCAAGCTTACCCAACAAAAT+GGG | - | chr1_4:27822871-27822890 | Msa0158480:intron | 40.0% | |
| ! | GGAAAACGTGACACGATTTT+CGG | + | chr1_4:27823022-27823041 | None:intergenic | 40.0% |
| ! | GGAAAACGTGACACGATTTT+GGG | + | chr1_4:27823022-27823041 | None:intergenic | 40.0% |
| GAATGCATGTTTGTCTTGGA+GGG | + | chr1_4:27823064-27823083 | None:intergenic | 40.0% | |
| CTCCAAGACAAACATGCATT+CGG | - | chr1_4:27823063-27823082 | Msa0158480:CDS | 40.0% | |
| TGAAGAAACGTGACACGATT+TGG | + | chr1_4:27823113-27823132 | None:intergenic | 40.0% | |
| ATGGTAGTCGATGGTTAAAG+TGG | + | chr1_4:27823206-27823225 | None:intergenic | 40.0% | |
| TTAAGGAGAATGGTAGTCGA+TGG | + | chr1_4:27823215-27823234 | None:intergenic | 40.0% | |
| TTGAGGAATAGATCAAGGCA+TGG | + | chr1_4:27823238-27823257 | None:intergenic | 40.0% | |
| GTGTCTTGAGGAATAGATCA+AGG | + | chr1_4:27823243-27823262 | None:intergenic | 40.0% | |
| !! | TTGATTGGTGTTGTGTCTTG+AGG | + | chr1_4:27823255-27823274 | None:intergenic | 40.0% |
| ACAAAGTGTAGTTGGATGCA+AGG | + | chr1_4:27823374-27823393 | None:intergenic | 40.0% | |
| GTGGAACTACAAAGTGTAGT+TGG | + | chr1_4:27823382-27823401 | None:intergenic | 40.0% | |
| GAGGTAAAGGTGAAATCTTG+TGG | + | chr1_4:27823401-27823420 | None:intergenic | 40.0% | |
| ACCTTTACCTCTTCAAACCT+CGG | - | chr1_4:27823410-27823429 | Msa0158480:intron | 40.0% | |
| ATTGGAGGCAAGTGAATCTT+CGG | + | chr1_4:27823550-27823569 | None:intergenic | 40.0% | |
| GAGCATGTGAATTCTTCAAG+AGG | + | chr1_4:27823643-27823662 | None:intergenic | 40.0% | |
| GTGATGTGTGTGTTCTCAAT+GGG | + | chr1_4:27823852-27823871 | None:intergenic | 40.0% | |
| ! | TCATAATGGTAGTGTCATGG+CGG | + | chr1_4:27823874-27823893 | None:intergenic | 40.0% |
| ! | AGGTCATAATGGTAGTGTCA+TGG | + | chr1_4:27823877-27823896 | None:intergenic | 40.0% |
| AGAAGGTAAAGTGTGAAGAG+AGG | + | chr1_4:27823900-27823919 | None:intergenic | 40.0% | |
| TTACCTTCTTCGATTGTGCT+AGG | - | chr1_4:27823911-27823930 | Msa0158480:intron | 40.0% | |
| !! | TATGGAAGCATTGAAGGTTG+AGG | + | chr1_4:27823953-27823972 | None:intergenic | 40.0% |
| !! | GAAGTGTATGGAAGCATTGA+AGG | + | chr1_4:27823959-27823978 | None:intergenic | 40.0% |
| ! | CATGGTTCAATGGAAGTGTA+TGG | + | chr1_4:27823971-27823990 | None:intergenic | 40.0% |
| CAAAGGTTACATCTTGGAGA+TGG | + | chr1_4:27824001-27824020 | None:intergenic | 40.0% | |
| CATCTCCAAGATGTAACCTT+TGG | - | chr1_4:27823999-27824018 | Msa0158480:intron | 40.0% | |
| AGTCCGGAATTCACAACAAT+TGG | + | chr1_4:27824075-27824094 | None:intergenic | 40.0% | |
| ATGTGTGGAGCAAGTATCAA+TGG | - | chr1_4:27824121-27824140 | Msa0158480:intron | 40.0% | |
| GCAAAATCACAATCCAACCA+AGG | - | chr1_4:27826100-27826119 | Msa0158480:intron | 40.0% | |
| CATTGGTGAGATTGGGAAAA+TGG | + | chr1_4:27822508-27822527 | None:intergenic | 40.0% | |
| ! | GTCTTGTTCATTGGTGAGAT+TGG | + | chr1_4:27822516-27822535 | None:intergenic | 40.0% |
| ! | CATGAATTTTCACTCTCCCA+AGG | - | chr1_4:27822539-27822558 | Msa0158480:intron | 40.0% |
| !!! | TAAGGGTTGGTTCTCTTTTG+GGG | + | chr1_4:27822599-27822618 | None:intergenic | 40.0% |
| !!! | CTAAGGGTTGGTTCTCTTTT+GGG | + | chr1_4:27822600-27822619 | None:intergenic | 40.0% |
| TGAAATCAAAGGCTAAGGGT+TGG | + | chr1_4:27822612-27822631 | None:intergenic | 40.0% | |
| !!! | AAAAAGGGTTGGTGCCTTTT+GGG | + | chr1_4:27822726-27822745 | None:intergenic | 40.0% |
| ATCTTGGAGAACCAAAAGAG+GGG | + | chr1_4:27822758-27822777 | None:intergenic | 40.0% | |
| GAATCTTGGAGAACCAAAAG+AGG | + | chr1_4:27822760-27822779 | None:intergenic | 40.0% | |
| ACTAAAGGTTGAGGGTCTTT+GGG | + | chr1_4:27822806-27822825 | None:intergenic | 40.0% | |
| TACTAAAGGTTGAGGGTCTT+TGG | + | chr1_4:27822807-27822826 | None:intergenic | 40.0% | |
| ! | ACCAAAGGAGGGAACTTTTA+GGG | + | chr1_4:27822837-27822856 | None:intergenic | 40.0% |
| ! | AACCAAAGGAGGGAACTTTT+AGG | + | chr1_4:27822838-27822857 | None:intergenic | 40.0% |
| ATCTCATGGAAACCAAAGGA+GGG | + | chr1_4:27822848-27822867 | None:intergenic | 40.0% | |
| AATCTCATGGAAACCAAAGG+AGG | + | chr1_4:27822849-27822868 | None:intergenic | 40.0% | |
| GTGAATCTCATGGAAACCAA+AGG | + | chr1_4:27822852-27822871 | None:intergenic | 40.0% | |
| ACCAAGCTTACCCAACAAAA+TGG | - | chr1_4:27822870-27822889 | Msa0158480:intron | 40.0% | |
| CCAAGCTTACCCAACAAAAT+GGG | - | chr1_4:27822871-27822890 | Msa0158480:intron | 40.0% | |
| ! | GGAAAACGTGACACGATTTT+CGG | + | chr1_4:27823022-27823041 | None:intergenic | 40.0% |
| ! | GGAAAACGTGACACGATTTT+GGG | + | chr1_4:27823022-27823041 | None:intergenic | 40.0% |
| GAATGCATGTTTGTCTTGGA+GGG | + | chr1_4:27823064-27823083 | None:intergenic | 40.0% | |
| CTCCAAGACAAACATGCATT+CGG | - | chr1_4:27823063-27823082 | Msa0158480:CDS | 40.0% | |
| TGAAGAAACGTGACACGATT+TGG | + | chr1_4:27823113-27823132 | None:intergenic | 40.0% | |
| TAATTGACGGGATGAATGAG+TGG | - | chr1_4:27827086-27827105 | Msa0158480:intron | 40.0% | |
| ! | TGCAGGTTCACATTTTGTCA+AGG | - | chr1_4:27827247-27827266 | Msa0158480:intron | 40.0% |
| ! | GCAGGTTCACATTTTGTCAA+GGG | - | chr1_4:27827248-27827267 | Msa0158480:intron | 40.0% |
| ! | CAGGTTCACATTTTGTCAAG+GGG | - | chr1_4:27827249-27827268 | Msa0158480:intron | 40.0% |
| ! | TCAAGGGGTATGCTGAATTT+GGG | - | chr1_4:27827264-27827283 | Msa0158480:intron | 40.0% |
| GTATTTGTCAATGGAGATGG+TGG | - | chr1_4:27827302-27827321 | Msa0158480:intron | 40.0% | |
| ATATAAAAGGGACCCTCACT+AGG | + | chr1_4:27827393-27827412 | None:intergenic | 40.0% | |
| ! | TGAGGGTCCCTTTTATATGA+AGG | - | chr1_4:27827395-27827414 | Msa0158480:intron | 40.0% |
| ! | TCAAGCGAGTTACTTTGCTT+GGG | + | chr1_4:27828338-27828357 | None:intergenic | 40.0% |
| ! | TTCAAGCGAGTTACTTTGCT+TGG | + | chr1_4:27828339-27828358 | None:intergenic | 40.0% |
| TGTTGTTGTGACATGACGAA+TGG | - | chr1_4:27828464-27828483 | Msa0158480:intron | 40.0% | |
| GTTGTTGTGACATGACGAAT+GGG | - | chr1_4:27828465-27828484 | Msa0158480:intron | 40.0% | |
| TGAATAGGGTAACTTGGCTT+GGG | + | chr1_4:27829069-27829088 | None:intergenic | 40.0% | |
| ATGAATAGGGTAACTTGGCT+TGG | + | chr1_4:27829070-27829089 | None:intergenic | 40.0% | |
| AGCCAAGTTACCCTATTCAT+TGG | - | chr1_4:27829070-27829089 | Msa0158480:CDS | 40.0% | |
| CTATCAAGGAGAGGTTTCTA+TGG | - | chr1_4:27829123-27829142 | Msa0158480:CDS | 40.0% | |
| AGAGTGATAGTTGTTGGAGC+AGG | - | chr1_4:27821199-27821218 | Msa0158480:CDS | 45.0% | |
| GATGGAAAAGAAGGTGGGAA+TGG | + | chr1_4:27821382-27821401 | None:intergenic | 45.0% | |
| TAAGGATTCTGGTGAGGTTG+AGG | - | chr1_4:27821540-27821559 | Msa0158480:intron | 45.0% | |
| GGTGAGGTTGAGGAATATGA+AGG | - | chr1_4:27821550-27821569 | Msa0158480:intron | 45.0% | |
| !!! | AGGTTTTTGGTTGTGGCTAG+TGG | - | chr1_4:27821574-27821593 | Msa0158480:intron | 45.0% |
| !! | CATGTTCTTGTTGTTGGGTC+TGG | - | chr1_4:27821703-27821722 | Msa0158480:intron | 45.0% |
| TTCCCCACATATTCCCTTCA+CGG | - | chr1_4:27822137-27822156 | Msa0158480:intron | 45.0% | |
| TTCCGTGAAGGGAATATGTG+GGG | + | chr1_4:27822142-27822161 | None:intergenic | 45.0% | |
| CTTCCGTGAAGGGAATATGT+GGG | + | chr1_4:27822143-27822162 | None:intergenic | 45.0% | |
| GCAAAACCACAATCCAACCA+AGG | - | chr1_4:27822289-27822308 | Msa0158480:intron | 45.0% | |
| CGAACTGGGTGAACATTTCT+TGG | + | chr1_4:27822353-27822372 | None:intergenic | 45.0% | |
| GGGGGTTAGATTCTAGTGTT+GGG | + | chr1_4:27822580-27822599 | None:intergenic | 45.0% | |
| TGGGGGTTAGATTCTAGTGT+TGG | + | chr1_4:27822581-27822600 | None:intergenic | 45.0% | |
| !!! | AAGGGTTGGTTCTCTTTTGG+GGG | + | chr1_4:27822598-27822617 | None:intergenic | 45.0% |
| !!! | GCTAAGGGTTGGTTCTCTTT+TGG | + | chr1_4:27822601-27822620 | None:intergenic | 45.0% |
| !! | CCTTTTGGGGAAGATTCATG+GGG | + | chr1_4:27822712-27822731 | None:intergenic | 45.0% |
| !! | GCCTTTTGGGGAAGATTCAT+GGG | + | chr1_4:27822713-27822732 | None:intergenic | 45.0% |
| !! | TGCCTTTTGGGGAAGATTCA+TGG | + | chr1_4:27822714-27822733 | None:intergenic | 45.0% |
| !!! | AAAAGGGTTGGTGCCTTTTG+GGG | + | chr1_4:27822725-27822744 | None:intergenic | 45.0% |
| !!! | GAAAAAGGGTTGGTGCCTTT+TGG | + | chr1_4:27822727-27822746 | None:intergenic | 45.0% |
| TCTTGGAGAACCAAAAGAGG+GGG | + | chr1_4:27822757-27822776 | None:intergenic | 45.0% | |
| ACCCTAAAAGTTCCCTCCTT+TGG | - | chr1_4:27822833-27822852 | Msa0158480:intron | 45.0% | |
| ! | GGTAAGCTTGGTGAATCTCA+TGG | + | chr1_4:27822862-27822881 | None:intergenic | 45.0% |
| ! | CCCATTTTGTTGGGTAAGCT+TGG | + | chr1_4:27822874-27822893 | None:intergenic | 45.0% |
| GTATCAATCGTGGCACGATT+TGG | + | chr1_4:27822950-27822969 | None:intergenic | 45.0% | |
| ! | GATAAGGTTGGTCGTACCTT+GGG | + | chr1_4:27822979-27822998 | None:intergenic | 45.0% |
| !! | GCACGTTTTCAGGATAAGGT+TGG | + | chr1_4:27822991-27823010 | None:intergenic | 45.0% |
| ! | GGGAAAACGTGACACGATTT+TGG | + | chr1_4:27823023-27823042 | None:intergenic | 45.0% |
| CGAATGCATGTTTGTCTTGG+AGG | + | chr1_4:27823065-27823084 | None:intergenic | 45.0% | |
| AACCGTGTCACGATTTCTGA+GGG | + | chr1_4:27823089-27823108 | None:intergenic | 45.0% | |
| CAAGGCATGGTTAAGGAGAA+TGG | + | chr1_4:27823225-27823244 | None:intergenic | 45.0% | |
| TGTGTGGATCAAGGTTCAAG+CGG | + | chr1_4:27823288-27823307 | None:intergenic | 45.0% | |
| GTGGAACTATCAAGGATGGT+TGG | + | chr1_4:27823328-27823347 | None:intergenic | 45.0% | |
| GCTTGTGGAACTATCAAGGA+TGG | + | chr1_4:27823332-27823351 | None:intergenic | 45.0% | |
| GGAAGCTTGTGGAACTATCA+AGG | + | chr1_4:27823336-27823355 | None:intergenic | 45.0% | |
| GAATCAGACTTGGAAGCTTG+TGG | + | chr1_4:27823347-27823366 | None:intergenic | 45.0% | |
| TCCGAGGTTTGAAGAGGTAA+AGG | + | chr1_4:27823414-27823433 | None:intergenic | 45.0% | |
| GGATGCAAGGAACTTCAAGA+GGG | + | chr1_4:27823447-27823466 | None:intergenic | 45.0% | |
| TGGATGCAAGGAACTTCAAG+AGG | + | chr1_4:27823448-27823467 | None:intergenic | 45.0% | |
| TCCTTGCATCCAACTACACT+AGG | - | chr1_4:27823456-27823475 | Msa0158480:intron | 45.0% | |
| TCCTAGTGTAGTTGGATGCA+AGG | + | chr1_4:27823460-27823479 | None:intergenic | 45.0% | |
| AGCCTACACCATAACCTCTT+CGG | - | chr1_4:27823498-27823517 | Msa0158480:intron | 45.0% | |
| TTGGAGGCAAGTGAATCTTC+GGG | + | chr1_4:27823549-27823568 | None:intergenic | 45.0% | |
| CACTTGCCTCCAATTACCAT+TGG | - | chr1_4:27823556-27823575 | Msa0158480:intron | 45.0% | |
| CGGAAAAGGCCAATGGTAAT+TGG | + | chr1_4:27823568-27823587 | None:intergenic | 45.0% | |
| GAATTACCGGAAAAGGCCAA+TGG | + | chr1_4:27823575-27823594 | None:intergenic | 45.0% | |
| GCTTGTGGAATTACCGGAAA+AGG | + | chr1_4:27823582-27823601 | None:intergenic | 45.0% | |
| AGAATGTTTGGCATGGCTTG+TGG | + | chr1_4:27823597-27823616 | None:intergenic | 45.0% | |
| GGGTTGAAGAATGTTTGGCA+TGG | + | chr1_4:27823604-27823623 | None:intergenic | 45.0% | |
| GAATTCTTCAAGAGGACGGA+AGG | + | chr1_4:27823635-27823654 | None:intergenic | 45.0% | |
| AGAGAAAGCTCAACTTGAGG+TGG | + | chr1_4:27823725-27823744 | None:intergenic | 45.0% | |
| GGTAGAGAAAGCTCAACTTG+AGG | + | chr1_4:27823728-27823747 | None:intergenic | 45.0% | |
| GAGTACGCATTTGGAAGTTG+AGG | + | chr1_4:27823749-27823768 | None:intergenic | 45.0% | |
| GCATAGTGTGAGTACGCATT+TGG | + | chr1_4:27823758-27823777 | None:intergenic | 45.0% | |
| ATACTCGCGATCAACCTTTG+AGG | + | chr1_4:27823799-27823818 | None:intergenic | 45.0% | |
| CTCAATGGGTAAGTTTAGCC+TGG | + | chr1_4:27823838-27823857 | None:intergenic | 45.0% | |
| GGTGATGTGTGTGTTCTCAA+TGG | + | chr1_4:27823853-27823872 | None:intergenic | 45.0% | |
| GTGAAGAGAGGAGGTCATAA+TGG | + | chr1_4:27823888-27823907 | None:intergenic | 45.0% | |
| AGGTAAAGTGTGAAGAGAGG+AGG | + | chr1_4:27823897-27823916 | None:intergenic | 45.0% | |
| CATCCTAGCACAATCGAAGA+AGG | + | chr1_4:27823917-27823936 | None:intergenic | 45.0% | |
| TTCGATTGTGCTAGGATGAC+CGG | - | chr1_4:27823919-27823938 | Msa0158480:intron | 45.0% | |
| !!! | GAAGGTTGAGGTTTTGAAGC+CGG | + | chr1_4:27823941-27823960 | None:intergenic | 45.0% |
| TGGAAGCAAGCATGGTTCAA+TGG | + | chr1_4:27823981-27824000 | None:intergenic | 45.0% | |
| GGGTACCAAAGGTTACATCT+TGG | + | chr1_4:27824007-27824026 | None:intergenic | 45.0% | |
| GATGTAACCTTTGGTACCCA+TGG | - | chr1_4:27824008-27824027 | Msa0158480:intron | 45.0% | |
| GTTTGTCAAGTGTGCACCAT+GGG | + | chr1_4:27824027-27824046 | None:intergenic | 45.0% | |
| AGTTTGTCAAGTGTGCACCA+TGG | + | chr1_4:27824028-27824047 | None:intergenic | 45.0% | |
| GCGCCAATTGTTGTGAATTC+CGG | - | chr1_4:27824069-27824088 | Msa0158480:intron | 45.0% | |
| GCAAAACCACAATCCAACCA+AGG | - | chr1_4:27822289-27822308 | Msa0158480:intron | 45.0% | |
| GGGGGTTAGATTCTAGTGTT+GGG | + | chr1_4:27822580-27822599 | None:intergenic | 45.0% | |
| TGGGGGTTAGATTCTAGTGT+TGG | + | chr1_4:27822581-27822600 | None:intergenic | 45.0% | |
| !!! | AAGGGTTGGTTCTCTTTTGG+GGG | + | chr1_4:27822598-27822617 | None:intergenic | 45.0% |
| !!! | GCTAAGGGTTGGTTCTCTTT+TGG | + | chr1_4:27822601-27822620 | None:intergenic | 45.0% |
| !! | CCTTTTGGGGAAGATTCATG+GGG | + | chr1_4:27822712-27822731 | None:intergenic | 45.0% |
| !! | GCCTTTTGGGGAAGATTCAT+GGG | + | chr1_4:27822713-27822732 | None:intergenic | 45.0% |
| !! | TGCCTTTTGGGGAAGATTCA+TGG | + | chr1_4:27822714-27822733 | None:intergenic | 45.0% |
| !!! | AAAAGGGTTGGTGCCTTTTG+GGG | + | chr1_4:27822725-27822744 | None:intergenic | 45.0% |
| !!! | GAAAAAGGGTTGGTGCCTTT+TGG | + | chr1_4:27822727-27822746 | None:intergenic | 45.0% |
| TCTTGGAGAACCAAAAGAGG+GGG | + | chr1_4:27822757-27822776 | None:intergenic | 45.0% | |
| ACCCTAAAAGTTCCCTCCTT+TGG | - | chr1_4:27822833-27822852 | Msa0158480:intron | 45.0% | |
| ! | GGTAAGCTTGGTGAATCTCA+TGG | + | chr1_4:27822862-27822881 | None:intergenic | 45.0% |
| ! | CCCATTTTGTTGGGTAAGCT+TGG | + | chr1_4:27822874-27822893 | None:intergenic | 45.0% |
| GTATCAATCGTGGCACGATT+TGG | + | chr1_4:27822950-27822969 | None:intergenic | 45.0% | |
| ! | GATAAGGTTGGTCGTACCTT+GGG | + | chr1_4:27822979-27822998 | None:intergenic | 45.0% |
| !! | GCACGTTTTCAGGATAAGGT+TGG | + | chr1_4:27822991-27823010 | None:intergenic | 45.0% |
| ! | GGGAAAACGTGACACGATTT+TGG | + | chr1_4:27823023-27823042 | None:intergenic | 45.0% |
| CGAATGCATGTTTGTCTTGG+AGG | + | chr1_4:27823065-27823084 | None:intergenic | 45.0% | |
| AACCGTGTCACGATTTCTGA+GGG | + | chr1_4:27823089-27823108 | None:intergenic | 45.0% | |
| CAAGGCATGGTTAAGGAGAA+TGG | + | chr1_4:27823225-27823244 | None:intergenic | 45.0% | |
| TGTGTGGATCAAGGTTCAAG+CGG | + | chr1_4:27823288-27823307 | None:intergenic | 45.0% | |
| GTGGAACTATCAAGGATGGT+TGG | + | chr1_4:27823328-27823347 | None:intergenic | 45.0% | |
| GCTTGTGGAACTATCAAGGA+TGG | + | chr1_4:27823332-27823351 | None:intergenic | 45.0% | |
| GGAAGCTTGTGGAACTATCA+AGG | + | chr1_4:27823336-27823355 | None:intergenic | 45.0% | |
| GAATCAGACTTGGAAGCTTG+TGG | + | chr1_4:27823347-27823366 | None:intergenic | 45.0% | |
| GCAAGGTGAAGAATCAGACT+TGG | + | chr1_4:27825262-27825281 | None:intergenic | 45.0% | |
| TCCGAGGTTTGAAGAGGTAA+AGG | + | chr1_4:27823414-27823433 | None:intergenic | 45.0% | |
| GGATGCAAGGAACTTCAAGA+GGG | + | chr1_4:27823447-27823466 | None:intergenic | 45.0% | |
| TGGATGCAAGGAACTTCAAG+AGG | + | chr1_4:27823448-27823467 | None:intergenic | 45.0% | |
| TCCTTGCATCCAACTACACT+AGG | - | chr1_4:27823456-27823475 | Msa0158480:intron | 45.0% | |
| TCCTAGTGTAGTTGGATGCA+AGG | + | chr1_4:27823460-27823479 | None:intergenic | 45.0% | |
| AGCCTACACCATAACCTCTT+CGG | - | chr1_4:27823498-27823517 | Msa0158480:intron | 45.0% | |
| TTGGAGGCAAGTGAATCTTC+GGG | + | chr1_4:27823549-27823568 | None:intergenic | 45.0% | |
| CACTTGCCTCCAATTACCAT+TGG | - | chr1_4:27823556-27823575 | Msa0158480:intron | 45.0% | |
| AAAGGGCCAATGGTAATTGG+AGG | + | chr1_4:27825470-27825489 | None:intergenic | 45.0% | |
| CAATTACCATTGGCCCTTTC+CGG | - | chr1_4:27825471-27825490 | Msa0158480:intron | 45.0% | |
| GCTTGTGGAATTACCGGAAA+GGG | + | chr1_4:27823582-27823601 | None:intergenic | 45.0% | |
| AGAATGTTTGGCATGGCTTG+TGG | + | chr1_4:27823597-27823616 | None:intergenic | 45.0% | |
| GGGTTGAAGAATGTTTGGCA+TGG | + | chr1_4:27823604-27823623 | None:intergenic | 45.0% | |
| GAATTCTTCAAGAGGACGGA+AGG | + | chr1_4:27823635-27823654 | None:intergenic | 45.0% | |
| AGAGAAAGCTCAACTTGAGG+TGG | + | chr1_4:27823725-27823744 | None:intergenic | 45.0% | |
| GGTAGAGAAAGCTCAACTTG+AGG | + | chr1_4:27823728-27823747 | None:intergenic | 45.0% | |
| GAGTACGCATTTGGAAGTTG+AGG | + | chr1_4:27823749-27823768 | None:intergenic | 45.0% | |
| GCATAGTGTGAGTACGCATT+TGG | + | chr1_4:27823758-27823777 | None:intergenic | 45.0% | |
| ATACTCGCGATCAACCTTTG+AGG | + | chr1_4:27823799-27823818 | None:intergenic | 45.0% | |
| CTCAATGGGTAAGTTTAGCC+TGG | + | chr1_4:27823838-27823857 | None:intergenic | 45.0% | |
| GGTGATGTGTGTGTTCTCAA+TGG | + | chr1_4:27823853-27823872 | None:intergenic | 45.0% | |
| GTGAAGAGAGGAGGTCATAA+TGG | + | chr1_4:27823888-27823907 | None:intergenic | 45.0% | |
| AGGTAAAGTGTGAAGAGAGG+AGG | + | chr1_4:27823897-27823916 | None:intergenic | 45.0% | |
| CATCCTAGCACAATCGAAGA+AGG | + | chr1_4:27823917-27823936 | None:intergenic | 45.0% | |
| TTCGATTGTGCTAGGATGAC+CGG | - | chr1_4:27823919-27823938 | Msa0158480:intron | 45.0% | |
| !!! | GAAGGTTGAGGTTTTGAAGC+CGG | + | chr1_4:27823941-27823960 | None:intergenic | 45.0% |
| TGGAAGCAAGCATGGTTCAA+TGG | + | chr1_4:27823981-27824000 | None:intergenic | 45.0% | |
| GGGTACCAAAGGTTACATCT+TGG | + | chr1_4:27824007-27824026 | None:intergenic | 45.0% | |
| GATGTAACCTTTGGTACCCA+TGG | - | chr1_4:27824008-27824027 | Msa0158480:intron | 45.0% | |
| GTTTGTCAAGTGTGCACCAT+GGG | + | chr1_4:27824027-27824046 | None:intergenic | 45.0% | |
| AGTTTGTCAAGTGTGCACCA+TGG | + | chr1_4:27824028-27824047 | None:intergenic | 45.0% | |
| GCGCCAATTGTTGTGAATTC+CGG | - | chr1_4:27824069-27824088 | Msa0158480:intron | 45.0% | |
| GGGGGTTAGATTCTAGTGTT+GGG | + | chr1_4:27822580-27822599 | None:intergenic | 45.0% | |
| TGGGGGTTAGATTCTAGTGT+TGG | + | chr1_4:27822581-27822600 | None:intergenic | 45.0% | |
| !!! | AAGGGTTGGTTCTCTTTTGG+GGG | + | chr1_4:27822598-27822617 | None:intergenic | 45.0% |
| !!! | GCTAAGGGTTGGTTCTCTTT+TGG | + | chr1_4:27822601-27822620 | None:intergenic | 45.0% |
| !! | CCTTTTGGGGAAGATTCATG+GGG | + | chr1_4:27822712-27822731 | None:intergenic | 45.0% |
| !! | GCCTTTTGGGGAAGATTCAT+GGG | + | chr1_4:27822713-27822732 | None:intergenic | 45.0% |
| !! | TGCCTTTTGGGGAAGATTCA+TGG | + | chr1_4:27822714-27822733 | None:intergenic | 45.0% |
| !!! | AAAAGGGTTGGTGCCTTTTG+GGG | + | chr1_4:27822725-27822744 | None:intergenic | 45.0% |
| !!! | GAAAAAGGGTTGGTGCCTTT+TGG | + | chr1_4:27822727-27822746 | None:intergenic | 45.0% |
| TCTTGGAGAACCAAAAGAGG+GGG | + | chr1_4:27822757-27822776 | None:intergenic | 45.0% | |
| ACCCTAAAAGTTCCCTCCTT+TGG | - | chr1_4:27822833-27822852 | Msa0158480:intron | 45.0% | |
| ! | GGTAAGCTTGGTGAATCTCA+TGG | + | chr1_4:27822862-27822881 | None:intergenic | 45.0% |
| ! | CCCATTTTGTTGGGTAAGCT+TGG | + | chr1_4:27822874-27822893 | None:intergenic | 45.0% |
| GTATCAATCGTGGCACGATT+TGG | + | chr1_4:27822950-27822969 | None:intergenic | 45.0% | |
| ! | GATAAGGTTGGTCGTACCTT+GGG | + | chr1_4:27822979-27822998 | None:intergenic | 45.0% |
| !! | GCACGTTTTCAGGATAAGGT+TGG | + | chr1_4:27822991-27823010 | None:intergenic | 45.0% |
| ! | GGGAAAACGTGACACGATTT+TGG | + | chr1_4:27823023-27823042 | None:intergenic | 45.0% |
| CGAATGCATGTTTGTCTTGG+AGG | + | chr1_4:27823065-27823084 | None:intergenic | 45.0% | |
| AACCGTGTCACGATTTCTGA+GGG | + | chr1_4:27823089-27823108 | None:intergenic | 45.0% | |
| ! | GTCAAGGGGTATGCTGAATT+TGG | - | chr1_4:27827263-27827282 | Msa0158480:intron | 45.0% |
| ! | CAAGGGGTATGCTGAATTTG+GGG | - | chr1_4:27827265-27827284 | Msa0158480:intron | 45.0% |
| !! | GGAGATGGTGGATTTAGTGA+TGG | - | chr1_4:27827314-27827333 | Msa0158480:intron | 45.0% |
| TACGGGGATGTCACGAATTA+TGG | - | chr1_4:27827357-27827376 | Msa0158480:intron | 45.0% | |
| ACGGGGATGTCACGAATTAT+GGG | - | chr1_4:27827358-27827377 | Msa0158480:intron | 45.0% | |
| GATGTCACGAATTATGGGGT+TGG | - | chr1_4:27827363-27827382 | Msa0158480:intron | 45.0% | |
| ! | TCACGAATTATGGGGTTGGT+AGG | - | chr1_4:27827367-27827386 | Msa0158480:intron | 45.0% |
| TTAAGGACCAAAGTGGTGAG+AGG | - | chr1_4:27827721-27827740 | Msa0158480:intron | 45.0% | |
| TAAGGACCAAAGTGGTGAGA+GGG | - | chr1_4:27827722-27827741 | Msa0158480:intron | 45.0% | |
| !! | GGTGAGAGGGTATTGGTTTA+AGG | - | chr1_4:27827735-27827754 | Msa0158480:intron | 45.0% |
| ! | CAAGCGAGTTACTTTGCTTG+GGG | + | chr1_4:27828337-27828356 | None:intergenic | 45.0% |
| TCAAGAGATCAACCCACAAG+TGG | - | chr1_4:27828608-27828627 | Msa0158480:CDS | 45.0% | |
| ATCAACCCACAAGTGGCTTA+AGG | - | chr1_4:27828615-27828634 | Msa0158480:CDS | 45.0% | |
| GCAAACCTTAAGCCACTTGT+GGG | + | chr1_4:27828623-27828642 | None:intergenic | 45.0% | |
| TGCAAACCTTAAGCCACTTG+TGG | + | chr1_4:27828624-27828643 | None:intergenic | 45.0% | |
| TGTGTTGGACTATCAAGGAG+AGG | - | chr1_4:27829114-27829133 | Msa0158480:CDS | 45.0% | |
| CTGCTACTGAGAGACCAGAA+GGG | + | chr1_4:27821225-27821244 | None:intergenic | 50.0% | |
| ! | GAAGGTGGGAATGGTTTGTG+AGG | + | chr1_4:27821373-27821392 | None:intergenic | 50.0% |
| GTTGTTGGGTCTGGGAATTC+TGG | - | chr1_4:27821712-27821731 | Msa0158480:intron | 50.0% | |
| CCTTCCGTGAAGGGAATATG+TGG | + | chr1_4:27822144-27822163 | None:intergenic | 50.0% | |
| CCACATATTCCCTTCACGGA+AGG | - | chr1_4:27822141-27822160 | Msa0158480:intron | 50.0% | |
| CATATTCCCTTCACGGAAGG+TGG | - | chr1_4:27822144-27822163 | Msa0158480:intron | 50.0% | |
| CACTTACCACCTTCCGTGAA+GGG | + | chr1_4:27822153-27822172 | None:intergenic | 50.0% | |
| ACACTTACCACCTTCCGTGA+AGG | + | chr1_4:27822154-27822173 | None:intergenic | 50.0% | |
| !! | AGGTCAAGTTGGACCGAACT+GGG | + | chr1_4:27822367-27822386 | None:intergenic | 50.0% |
| !! | TAGGTCAAGTTGGACCGAAC+TGG | + | chr1_4:27822368-27822387 | None:intergenic | 50.0% |
| GGTCCAACTTGACCTACTCT+GGG | - | chr1_4:27822372-27822391 | Msa0158480:intron | 50.0% | |
| GTCCAACTTGACCTACTCTG+GGG | - | chr1_4:27822373-27822392 | Msa0158480:intron | 50.0% | |
| TCCAACTTGACCTACTCTGG+GGG | - | chr1_4:27822374-27822393 | Msa0158480:intron | 50.0% | |
| ATCAATCTCTCCCCCAGAGT+AGG | + | chr1_4:27822387-27822406 | None:intergenic | 50.0% | |
| TGGGGAAGATTCATGGGGTT+GGG | + | chr1_4:27822707-27822726 | None:intergenic | 50.0% | |
| TTGGGGAAGATTCATGGGGT+TGG | + | chr1_4:27822708-27822727 | None:intergenic | 50.0% | |
| CCCCATGAATCTTCCCCAAA+AGG | - | chr1_4:27822709-27822728 | Msa0158480:intron | 50.0% | |
| AACCAAAAGAGGGGGCTCTT+GGG | + | chr1_4:27822749-27822768 | None:intergenic | 50.0% | |
| TGGGTCGTACGTATCAATCG+TGG | + | chr1_4:27822960-27822979 | None:intergenic | 50.0% | |
| CGATTGATACGTACGACCCA+AGG | - | chr1_4:27822960-27822979 | Msa0158480:CDS | 50.0% | |
| ! | GGATAAGGTTGGTCGTACCT+TGG | + | chr1_4:27822980-27822999 | None:intergenic | 50.0% |
| !! | CTGGGCACGTTTTCAGGATA+AGG | + | chr1_4:27822995-27823014 | None:intergenic | 50.0% |
| !! | GACACGATTTTCGGCTTGCT+GGG | + | chr1_4:27823013-27823032 | None:intergenic | 50.0% |
| !! | TGACACGATTTTCGGCTTGC+TGG | + | chr1_4:27823014-27823033 | None:intergenic | 50.0% |
| GGCCGAATGCATGTTTGTCT+TGG | + | chr1_4:27823068-27823087 | None:intergenic | 50.0% | |
| CAACCGTGTCACGATTTCTG+AGG | + | chr1_4:27823090-27823109 | None:intergenic | 50.0% | |
| AGCGGGGATTTGGACTTGAT+TGG | + | chr1_4:27823270-27823289 | None:intergenic | 50.0% | |
| TCAAGGTTCAAGCGGGGATT+TGG | + | chr1_4:27823280-27823299 | None:intergenic | 50.0% | |
| TGTGGATCAAGGTTCAAGCG+GGG | + | chr1_4:27823286-27823305 | None:intergenic | 50.0% | |
| GTGTGGATCAAGGTTCAAGC+GGG | + | chr1_4:27823287-27823306 | None:intergenic | 50.0% | |
| CAAGGATGGTTGGATGCAAG+TGG | + | chr1_4:27823318-27823337 | None:intergenic | 50.0% | |
| AGGCATTCCGAGGTTTGAAG+AGG | + | chr1_4:27823420-27823439 | None:intergenic | 50.0% | |
| TGCAAGGAACTTCAAGAGGG+CGG | + | chr1_4:27823444-27823463 | None:intergenic | 50.0% | |
| GAGGTTATGGTGTAGGCTTG+TGG | + | chr1_4:27823496-27823515 | None:intergenic | 50.0% | |
| AAGTGAATCTTCGGGAGGAC+GGG | + | chr1_4:27823541-27823560 | None:intergenic | 50.0% | |
| CAAGTGAATCTTCGGGAGGA+CGG | + | chr1_4:27823542-27823561 | None:intergenic | 50.0% | |
| ! | GGCATGGCTTGTGGAATTAC+CGG | + | chr1_4:27823588-27823607 | None:intergenic | 50.0% |
| GCCAAACATTCTTCAACCCC+CGG | - | chr1_4:27823605-27823624 | Msa0158480:intron | 50.0% | |
| TCCGGGGGTTGAAGAATGTT+TGG | + | chr1_4:27823609-27823628 | None:intergenic | 50.0% | |
| CAACTAGAGCATAGCACCCA+AGG | - | chr1_4:27823664-27823683 | Msa0158480:intron | 50.0% | |
| CTCCATAGTCGTACCATTCC+CGG | - | chr1_4:27823688-27823707 | Msa0158480:intron | 50.0% | |
| !! | TGAGGTGGAGTTGATGACAC+CGG | + | chr1_4:27823710-27823729 | None:intergenic | 50.0% |
| ! | TTTGAGGTGGAGTGACAAGG+TGG | + | chr1_4:27823783-27823802 | None:intergenic | 50.0% |
| ACCTTGTCACTCCACCTCAA+AGG | - | chr1_4:27823782-27823801 | Msa0158480:intron | 50.0% | |
| !! | ACCTTTGAGGTGGAGTGACA+AGG | + | chr1_4:27823786-27823805 | None:intergenic | 50.0% |
| GTAAGTTTAGCCTGGAGAGG+CGG | + | chr1_4:27823830-27823849 | None:intergenic | 50.0% | |
| TGGGTAAGTTTAGCCTGGAG+AGG | + | chr1_4:27823833-27823852 | None:intergenic | 50.0% | |
| CTTGGAGATGGAAGCAAGCA+TGG | + | chr1_4:27823989-27824008 | None:intergenic | 50.0% | |
| !! | AGGTCAAGTTGGACCGAACT+GGG | + | chr1_4:27822367-27822386 | None:intergenic | 50.0% |
| !! | TAGGTCAAGTTGGACCGAAC+TGG | + | chr1_4:27822368-27822387 | None:intergenic | 50.0% |
| GGTCCAACTTGACCTACTCT+GGG | - | chr1_4:27822372-27822391 | Msa0158480:intron | 50.0% | |
| GTCCAACTTGACCTACTCTG+GGG | - | chr1_4:27822373-27822392 | Msa0158480:intron | 50.0% | |
| GATCAATCTCTCCCCAGAGT+AGG | + | chr1_4:27824293-27824312 | None:intergenic | 50.0% | |
| TGGGGAAGATTCATGGGGTT+GGG | + | chr1_4:27822707-27822726 | None:intergenic | 50.0% | |
| TTGGGGAAGATTCATGGGGT+TGG | + | chr1_4:27822708-27822727 | None:intergenic | 50.0% | |
| CCCCATGAATCTTCCCCAAA+AGG | - | chr1_4:27822709-27822728 | Msa0158480:intron | 50.0% | |
| AACCAAAAGAGGGGGCTCTT+GGG | + | chr1_4:27822749-27822768 | None:intergenic | 50.0% | |
| TGGGTCGTACGTATCAATCG+TGG | + | chr1_4:27822960-27822979 | None:intergenic | 50.0% | |
| CGATTGATACGTACGACCCA+AGG | - | chr1_4:27822960-27822979 | Msa0158480:CDS | 50.0% | |
| ! | GGATAAGGTTGGTCGTACCT+TGG | + | chr1_4:27822980-27822999 | None:intergenic | 50.0% |
| !! | CTGGGCACGTTTTCAGGATA+AGG | + | chr1_4:27822995-27823014 | None:intergenic | 50.0% |
| !! | GACACGATTTTCGGCTTGCT+GGG | + | chr1_4:27823013-27823032 | None:intergenic | 50.0% |
| !! | TGACACGATTTTCGGCTTGC+TGG | + | chr1_4:27823014-27823033 | None:intergenic | 50.0% |
| GGCCGAATGCATGTTTGTCT+TGG | + | chr1_4:27823068-27823087 | None:intergenic | 50.0% | |
| CAACCGTGTCACGATTTCTG+AGG | + | chr1_4:27823090-27823109 | None:intergenic | 50.0% | |
| AGCGGGGATTTGGACTTGAT+TGG | + | chr1_4:27823270-27823289 | None:intergenic | 50.0% | |
| TCAAGGTTCAAGCGGGGATT+TGG | + | chr1_4:27823280-27823299 | None:intergenic | 50.0% | |
| TGTGGATCAAGGTTCAAGCG+GGG | + | chr1_4:27823286-27823305 | None:intergenic | 50.0% | |
| GTGTGGATCAAGGTTCAAGC+GGG | + | chr1_4:27823287-27823306 | None:intergenic | 50.0% | |
| CAAGGATGGTTGGATGCAAG+TGG | + | chr1_4:27823318-27823337 | None:intergenic | 50.0% | |
| AGGCATTCCGAGGTTTGAAG+AGG | + | chr1_4:27823420-27823439 | None:intergenic | 50.0% | |
| TGCAAGGAACTTCAAGAGGG+CGG | + | chr1_4:27823444-27823463 | None:intergenic | 50.0% | |
| GAGGTTATGGTGTAGGCTTG+TGG | + | chr1_4:27823496-27823515 | None:intergenic | 50.0% | |
| AAGTGAATCTTCGGGAGGAC+GGG | + | chr1_4:27823541-27823560 | None:intergenic | 50.0% | |
| CAAGTGAATCTTCGGGAGGA+CGG | + | chr1_4:27823542-27823561 | None:intergenic | 50.0% | |
| CGGAAAGGGCCAATGGTAAT+TGG | + | chr1_4:27825473-27825492 | None:intergenic | 50.0% | |
| GAATTACCGGAAAGGGCCAA+TGG | + | chr1_4:27825480-27825499 | None:intergenic | 50.0% | |
| GGCTTGTGGAATTACCGGAA+AGG | + | chr1_4:27823583-27823602 | None:intergenic | 50.0% | |
| ! | GGCATGGCTTGTGGAATTAC+CGG | + | chr1_4:27823588-27823607 | None:intergenic | 50.0% |
| GCCAAACATTCTTCAACCCC+CGG | - | chr1_4:27823605-27823624 | Msa0158480:intron | 50.0% | |
| TCCGGGGGTTGAAGAATGTT+TGG | + | chr1_4:27823609-27823628 | None:intergenic | 50.0% | |
| CAACTAGAGCATAGCACCCA+AGG | - | chr1_4:27823664-27823683 | Msa0158480:intron | 50.0% | |
| CTCCATAGTCGTACCATTCC+CGG | - | chr1_4:27823688-27823707 | Msa0158480:intron | 50.0% | |
| !! | TGAGGTGGAGTTGATGACAC+CGG | + | chr1_4:27823710-27823729 | None:intergenic | 50.0% |
| ! | TTTGAGGTGGAGTGACAAGG+TGG | + | chr1_4:27823783-27823802 | None:intergenic | 50.0% |
| ACCTTGTCACTCCACCTCAA+AGG | - | chr1_4:27823782-27823801 | Msa0158480:intron | 50.0% | |
| !! | ACCTTTGAGGTGGAGTGACA+AGG | + | chr1_4:27823786-27823805 | None:intergenic | 50.0% |
| GTAAGTTTAGCCTGGAGAGG+CGG | + | chr1_4:27823830-27823849 | None:intergenic | 50.0% | |
| TGGGTAAGTTTAGCCTGGAG+AGG | + | chr1_4:27823833-27823852 | None:intergenic | 50.0% | |
| CTTGGAGATGGAAGCAAGCA+TGG | + | chr1_4:27823989-27824008 | None:intergenic | 50.0% | |
| GGTCCAACTTGACCTACTCT+GGG | - | chr1_4:27822372-27822391 | Msa0158480:intron | 50.0% | |
| GTCCAACTTGACCTACTCTG+GGG | - | chr1_4:27822373-27822392 | Msa0158480:intron | 50.0% | |
| TCCAACTTGACCTACTCTGG+GGG | - | chr1_4:27822374-27822393 | Msa0158480:intron | 50.0% | |
| ATCAATCTCTCCCCCAGAGT+AGG | + | chr1_4:27822387-27822406 | None:intergenic | 50.0% | |
| TGGGGAAGATTCATGGGGTT+GGG | + | chr1_4:27822707-27822726 | None:intergenic | 50.0% | |
| TTGGGGAAGATTCATGGGGT+TGG | + | chr1_4:27822708-27822727 | None:intergenic | 50.0% | |
| CCCCATGAATCTTCCCCAAA+AGG | - | chr1_4:27822709-27822728 | Msa0158480:intron | 50.0% | |
| AACCAAAAGAGGGGGCTCTT+GGG | + | chr1_4:27822749-27822768 | None:intergenic | 50.0% | |
| TGGGTCGTACGTATCAATCG+TGG | + | chr1_4:27822960-27822979 | None:intergenic | 50.0% | |
| CGATTGATACGTACGACCCA+AGG | - | chr1_4:27822960-27822979 | Msa0158480:CDS | 50.0% | |
| ! | GGATAAGGTTGGTCGTACCT+TGG | + | chr1_4:27822980-27822999 | None:intergenic | 50.0% |
| !! | CTGGGCACGTTTTCAGGATA+AGG | + | chr1_4:27822995-27823014 | None:intergenic | 50.0% |
| !! | GACACGATTTTCGGCTTGCT+GGG | + | chr1_4:27823013-27823032 | None:intergenic | 50.0% |
| !! | TGACACGATTTTCGGCTTGC+TGG | + | chr1_4:27823014-27823033 | None:intergenic | 50.0% |
| GGCCGAATGCATGTTTGTCT+TGG | + | chr1_4:27823068-27823087 | None:intergenic | 50.0% | |
| CAACCGTGTCACGATTTCTG+AGG | + | chr1_4:27823090-27823109 | None:intergenic | 50.0% | |
| CGGGGATGTCACGAATTATG+GGG | - | chr1_4:27827359-27827378 | Msa0158480:intron | 50.0% | |
| CCAATACCCTCTCACCACTT+TGG | + | chr1_4:27827731-27827750 | None:intergenic | 50.0% | |
| ! | CCAAAGTGGTGAGAGGGTAT+TGG | - | chr1_4:27827728-27827747 | Msa0158480:intron | 50.0% |
| !! | GTGGGTTGATCTCTTGAAGC+CGG | + | chr1_4:27828605-27828624 | None:intergenic | 50.0% |
| GCTGCTACTGAGAGACCAGA+AGG | + | chr1_4:27821226-27821245 | None:intergenic | 55.0% | |
| TGGGTCTGGGAATTCTGGCA+TGG | - | chr1_4:27821717-27821736 | Msa0158480:intron | 55.0% | |
| CGGTCCAACTTGACCTACTC+TGG | - | chr1_4:27822371-27822390 | Msa0158480:intron | 55.0% | |
| TCCCCCAGAGTAGGTCAAGT+TGG | + | chr1_4:27822378-27822397 | None:intergenic | 55.0% | |
| GGGCTCTTGGGAAAAAGGGT+TGG | + | chr1_4:27822737-27822756 | None:intergenic | 55.0% | |
| GAGGGGGCTCTTGGGAAAAA+GGG | + | chr1_4:27822741-27822760 | None:intergenic | 55.0% | |
| AGAGGGGGCTCTTGGGAAAA+AGG | + | chr1_4:27822742-27822761 | None:intergenic | 55.0% | |
| ! | TTCCCAAGAGCCCCCTCTTT+TGG | - | chr1_4:27822744-27822763 | Msa0158480:intron | 55.0% |
| GAACCAAAAGAGGGGGCTCT+TGG | + | chr1_4:27822750-27822769 | None:intergenic | 55.0% | |
| AGGTTGAGGGTCTTTGGGTG+AGG | + | chr1_4:27822801-27822820 | None:intergenic | 55.0% | |
| GGCCCTCAGAAATCGTGACA+CGG | - | chr1_4:27823084-27823103 | Msa0158480:CDS | 55.0% | |
| GGTTGGATGCAAGTGGAGGT+CGG | + | chr1_4:27823311-27823330 | None:intergenic | 55.0% | |
| GGATGGTTGGATGCAAGTGG+AGG | + | chr1_4:27823315-27823334 | None:intergenic | 55.0% | |
| AGGAACTTCAAGAGGGCGGA+AGG | + | chr1_4:27823440-27823459 | None:intergenic | 55.0% | |
| GGCCGAAGAGGTTATGGTGT+AGG | + | chr1_4:27823503-27823522 | None:intergenic | 55.0% | |
| ! | AGGACGGGTTTGATCACTCC+GGG | + | chr1_4:27823526-27823545 | None:intergenic | 55.0% |
| ! | GAGGACGGGTTTGATCACTC+CGG | + | chr1_4:27823527-27823546 | None:intergenic | 55.0% |
| GAGGCAAGTGAATCTTCGGG+AGG | + | chr1_4:27823546-27823565 | None:intergenic | 55.0% | |
| !! | AAGAGGACGGAAGGCATTCC+GGG | + | chr1_4:27823626-27823645 | None:intergenic | 55.0% |
| !! | CAAGAGGACGGAAGGCATTC+CGG | + | chr1_4:27823627-27823646 | None:intergenic | 55.0% |
| GGTACGACTATGGAGGCCTT+GGG | + | chr1_4:27823683-27823702 | None:intergenic | 55.0% | |
| TGGTACGACTATGGAGGCCT+TGG | + | chr1_4:27823684-27823703 | None:intergenic | 55.0% | |
| CGGGAATGGTACGACTATGG+AGG | + | chr1_4:27823690-27823709 | None:intergenic | 55.0% | |
| CACCGGGAATGGTACGACTA+TGG | + | chr1_4:27823693-27823712 | None:intergenic | 55.0% | |
| !! | GGAGTTGATGACACCGGGAA+TGG | + | chr1_4:27823704-27823723 | None:intergenic | 55.0% |
| !! | GAGGTGGAGTTGATGACACC+GGG | + | chr1_4:27823709-27823728 | None:intergenic | 55.0% |
| ! | CTCGCGATCAACCTTTGAGG+TGG | + | chr1_4:27823796-27823815 | None:intergenic | 55.0% |
| ATTCTTCACACCGCCTCTCC+AGG | - | chr1_4:27823817-27823836 | Msa0158480:intron | 55.0% | |
| GTGTGCACCATGGGTACCAA+AGG | + | chr1_4:27824018-27824037 | None:intergenic | 55.0% | |
| AAACTTCTCCCCTTGCCCCA+CGG | - | chr1_4:27824043-27824062 | Msa0158480:intron | 55.0% | |
| CGGTCCAACTTGACCTACTC+TGG | - | chr1_4:27822371-27822390 | Msa0158480:intron | 55.0% | |
| CTCCCCAGAGTAGGTCAAGT+TGG | + | chr1_4:27824284-27824303 | None:intergenic | 55.0% | |
| GGGCTCTTGGGAAAAAGGGT+TGG | + | chr1_4:27822737-27822756 | None:intergenic | 55.0% | |
| GAGGGGGCTCTTGGGAAAAA+GGG | + | chr1_4:27822741-27822760 | None:intergenic | 55.0% | |
| AGAGGGGGCTCTTGGGAAAA+AGG | + | chr1_4:27822742-27822761 | None:intergenic | 55.0% | |
| ! | TTCCCAAGAGCCCCCTCTTT+TGG | - | chr1_4:27822744-27822763 | Msa0158480:intron | 55.0% |
| GAACCAAAAGAGGGGGCTCT+TGG | + | chr1_4:27822750-27822769 | None:intergenic | 55.0% | |
| AGGTTGAGGGTCTTTGGGTG+AGG | + | chr1_4:27822801-27822820 | None:intergenic | 55.0% | |
| GGCCCTCAGAAATCGTGACA+CGG | - | chr1_4:27823084-27823103 | Msa0158480:CDS | 55.0% | |
| GGTTGGATGCAAGTGGAGGT+CGG | + | chr1_4:27823311-27823330 | None:intergenic | 55.0% | |
| GGATGGTTGGATGCAAGTGG+AGG | + | chr1_4:27823315-27823334 | None:intergenic | 55.0% | |
| AGGAACTTCAAGAGGGCGGA+AGG | + | chr1_4:27823440-27823459 | None:intergenic | 55.0% | |
| GGCCGAAGAGGTTATGGTGT+AGG | + | chr1_4:27823503-27823522 | None:intergenic | 55.0% | |
| ! | AGGACGGGTTTGATCACTCC+GGG | + | chr1_4:27823526-27823545 | None:intergenic | 55.0% |
| ! | GAGGACGGGTTTGATCACTC+CGG | + | chr1_4:27823527-27823546 | None:intergenic | 55.0% |
| GAGGCAAGTGAATCTTCGGG+AGG | + | chr1_4:27823546-27823565 | None:intergenic | 55.0% | |
| !! | AAGAGGACGGAAGGCATTCC+GGG | + | chr1_4:27823626-27823645 | None:intergenic | 55.0% |
| !! | CAAGAGGACGGAAGGCATTC+CGG | + | chr1_4:27823627-27823646 | None:intergenic | 55.0% |
| GGTACGACTATGGAGGCCTT+GGG | + | chr1_4:27823683-27823702 | None:intergenic | 55.0% | |
| TGGTACGACTATGGAGGCCT+TGG | + | chr1_4:27823684-27823703 | None:intergenic | 55.0% | |
| CGGGAATGGTACGACTATGG+AGG | + | chr1_4:27823690-27823709 | None:intergenic | 55.0% | |
| CACCGGGAATGGTACGACTA+TGG | + | chr1_4:27823693-27823712 | None:intergenic | 55.0% | |
| !! | GGAGTTGATGACACCGGGAA+TGG | + | chr1_4:27823704-27823723 | None:intergenic | 55.0% |
| !! | GAGGTGGAGTTGATGACACC+GGG | + | chr1_4:27823709-27823728 | None:intergenic | 55.0% |
| ! | CTCGCGATCAACCTTTGAGG+TGG | + | chr1_4:27823796-27823815 | None:intergenic | 55.0% |
| ATTCTTCACACCGCCTCTCC+AGG | - | chr1_4:27823817-27823836 | Msa0158480:intron | 55.0% | |
| GTGTGCACCATGGGTACCAA+AGG | + | chr1_4:27824018-27824037 | None:intergenic | 55.0% | |
| AAACTTCTCCCCTTGCCCCA+CGG | - | chr1_4:27824043-27824062 | Msa0158480:intron | 55.0% | |
| CGGTCCAACTTGACCTACTC+TGG | - | chr1_4:27822371-27822390 | Msa0158480:intron | 55.0% | |
| TCCCCCAGAGTAGGTCAAGT+TGG | + | chr1_4:27822378-27822397 | None:intergenic | 55.0% | |
| GGGCTCTTGGGAAAAAGGGT+TGG | + | chr1_4:27822737-27822756 | None:intergenic | 55.0% | |
| GAGGGGGCTCTTGGGAAAAA+GGG | + | chr1_4:27822741-27822760 | None:intergenic | 55.0% | |
| AGAGGGGGCTCTTGGGAAAA+AGG | + | chr1_4:27822742-27822761 | None:intergenic | 55.0% | |
| ! | TTCCCAAGAGCCCCCTCTTT+TGG | - | chr1_4:27822744-27822763 | Msa0158480:intron | 55.0% |
| GAACCAAAAGAGGGGGCTCT+TGG | + | chr1_4:27822750-27822769 | None:intergenic | 55.0% | |
| AGGTTGAGGGTCTTTGGGTG+AGG | + | chr1_4:27822801-27822820 | None:intergenic | 55.0% | |
| GGCCCTCAGAAATCGTGACA+CGG | - | chr1_4:27823084-27823103 | Msa0158480:CDS | 55.0% | |
| GTTGTTGGAGCAGGCCCTTC+TGG | - | chr1_4:27821208-27821227 | Msa0158480:CDS | 60.0% | |
| !!! | GGCTTGCTGGGCACGTTTTC+AGG | + | chr1_4:27823001-27823020 | None:intergenic | 60.0% |
| GGAGGTCGGTGTGTGGATCA+AGG | + | chr1_4:27823297-27823316 | None:intergenic | 60.0% | |
| TGCAAGTGGAGGTCGGTGTG+TGG | + | chr1_4:27823304-27823323 | None:intergenic | 60.0% | |
| ACCATAACCTCTTCGGCCCC+CGG | - | chr1_4:27823505-27823524 | Msa0158480:intron | 60.0% | |
| ! | GACGGGTTTGATCACTCCGG+GGG | + | chr1_4:27823524-27823543 | None:intergenic | 60.0% |
| ! | GGACGGGTTTGATCACTCCG+GGG | + | chr1_4:27823525-27823544 | None:intergenic | 60.0% |
| !! | AGAGGACGGAAGGCATTCCG+GGG | + | chr1_4:27823625-27823644 | None:intergenic | 60.0% |
| AACAATTGGCGCCCACCGTG+GGG | + | chr1_4:27824061-27824080 | None:intergenic | 60.0% | |
| CAACAATTGGCGCCCACCGT+GGG | + | chr1_4:27824062-27824081 | None:intergenic | 60.0% | |
| ACAACAATTGGCGCCCACCG+TGG | + | chr1_4:27824063-27824082 | None:intergenic | 60.0% | |
| !!! | GGCTTGCTGGGCACGTTTTC+AGG | + | chr1_4:27823001-27823020 | None:intergenic | 60.0% |
| GGAGGTCGGTGTGTGGATCA+AGG | + | chr1_4:27823297-27823316 | None:intergenic | 60.0% | |
| TGCAAGTGGAGGTCGGTGTG+TGG | + | chr1_4:27823304-27823323 | None:intergenic | 60.0% | |
| ACCATAACCTCTTCGGCCCC+CGG | - | chr1_4:27823505-27823524 | Msa0158480:intron | 60.0% | |
| ! | GACGGGTTTGATCACTCCGG+GGG | + | chr1_4:27823524-27823543 | None:intergenic | 60.0% |
| ! | GGACGGGTTTGATCACTCCG+GGG | + | chr1_4:27823525-27823544 | None:intergenic | 60.0% |
| !! | AGAGGACGGAAGGCATTCCG+GGG | + | chr1_4:27823625-27823644 | None:intergenic | 60.0% |
| AACAATTGGCGCCCACCGTG+GGG | + | chr1_4:27824061-27824080 | None:intergenic | 60.0% | |
| CAACAATTGGCGCCCACCGT+GGG | + | chr1_4:27824062-27824081 | None:intergenic | 60.0% | |
| ACAACAATTGGCGCCCACCG+TGG | + | chr1_4:27824063-27824082 | None:intergenic | 60.0% | |
| !!! | GGCTTGCTGGGCACGTTTTC+AGG | + | chr1_4:27823001-27823020 | None:intergenic | 60.0% |
| !! | TGGGGTTGGTAGGCCTAGTG+AGG | - | chr1_4:27827377-27827396 | Msa0158480:intron | 60.0% |
| !! | GGGGTTGGTAGGCCTAGTGA+GGG | - | chr1_4:27827378-27827397 | Msa0158480:intron | 60.0% |
| !! | AGAGGGCGGAAGGCATTCCG+AGG | + | chr1_4:27823430-27823449 | None:intergenic | 65.0% |
| TCCGGGGGCCGAAGAGGTTA+TGG | + | chr1_4:27823509-27823528 | None:intergenic | 65.0% | |
| !! | GAGGACGGAAGGCATTCCGG+GGG | + | chr1_4:27823624-27823643 | None:intergenic | 65.0% |
| TTCTCCCCTTGCCCCACGGT+GGG | - | chr1_4:27824047-27824066 | Msa0158480:intron | 65.0% | |
| !! | AGAGGGCGGAAGGCATTCCG+AGG | + | chr1_4:27823430-27823449 | None:intergenic | 65.0% |
| TCCGGGGGCCGAAGAGGTTA+TGG | + | chr1_4:27823509-27823528 | None:intergenic | 65.0% | |
| !! | GAGGACGGAAGGCATTCCGG+GGG | + | chr1_4:27823624-27823643 | None:intergenic | 65.0% |
| TTCTCCCCTTGCCCCACGGT+GGG | - | chr1_4:27824047-27824066 | Msa0158480:intron | 65.0% | |
| GATCACTCCGGGGGCCGAAG+AGG | + | chr1_4:27823515-27823534 | None:intergenic | 70.0% | |
| CTTCTCCCCTTGCCCCACGG+TGG | - | chr1_4:27824046-27824065 | Msa0158480:intron | 70.0% | |
| GATCACTCCGGGGGCCGAAG+AGG | + | chr1_4:27823515-27823534 | None:intergenic | 70.0% | |
| CTTCTCCCCTTGCCCCACGG+TGG | - | chr1_4:27824046-27824065 | Msa0158480:intron | 70.0% | |
| TGGCGCCCACCGTGGGGCAA+GGG | + | chr1_4:27824055-27824074 | None:intergenic | 75.0% | |
| TTGGCGCCCACCGTGGGGCA+AGG | + | chr1_4:27824056-27824075 | None:intergenic | 75.0% | |
| TGGCGCCCACCGTGGGGCAA+GGG | + | chr1_4:27824055-27824074 | None:intergenic | 75.0% | |
| TTGGCGCCCACCGTGGGGCA+AGG | + | chr1_4:27824056-27824075 | None:intergenic | 75.0% | |
| ! | GGCGCCCACCGTGGGGCAAG+GGG | + | chr1_4:27824054-27824073 | None:intergenic | 80.0% |
| ! | GGCGCCCACCGTGGGGCAAG+GGG | + | chr1_4:27824054-27824073 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 27821181 | 27829206 | 27821181 | ID=Msa0158480;Name=Msa0158480 |
| chr1_4 | mRNA | 27821181 | 27829206 | 27821181 | ID=Msa0158480-mRNA-1;Parent=Msa0158480;Name=Msa0158480-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|0.5|0.6|5|0|327 |
| chr1_4 | exon | 27828968 | 27829206 | 27828968 | ID=Msa0158480-mRNA-1:exon:9043;Parent=Msa0158480-mRNA-1 |
| chr1_4 | exon | 27828601 | 27828811 | 27828601 | ID=Msa0158480-mRNA-1:exon:9042;Parent=Msa0158480-mRNA-1 |
| chr1_4 | exon | 27822902 | 27823135 | 27822902 | ID=Msa0158480-mRNA-1:exon:9041;Parent=Msa0158480-mRNA-1 |
| chr1_4 | exon | 27821751 | 27821876 | 27821751 | ID=Msa0158480-mRNA-1:exon:9040;Parent=Msa0158480-mRNA-1 |
| chr1_4 | exon | 27821181 | 27821354 | 27821181 | ID=Msa0158480-mRNA-1:exon:9039;Parent=Msa0158480-mRNA-1 |
| chr1_4 | CDS | 27828968 | 27829206 | 27828968 | ID=Msa0158480-mRNA-1:cds;Parent=Msa0158480-mRNA-1 |
| chr1_4 | CDS | 27828601 | 27828811 | 27828601 | ID=Msa0158480-mRNA-1:cds;Parent=Msa0158480-mRNA-1 |
| chr1_4 | CDS | 27822902 | 27823135 | 27822902 | ID=Msa0158480-mRNA-1:cds;Parent=Msa0158480-mRNA-1 |
| chr1_4 | CDS | 27821751 | 27821876 | 27821751 | ID=Msa0158480-mRNA-1:cds;Parent=Msa0158480-mRNA-1 |
| chr1_4 | CDS | 27821181 | 27821354 | 27821181 | ID=Msa0158480-mRNA-1:cds;Parent=Msa0158480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
