Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419950 | XP_003601325.2 | 88.228 | 841 | 24 | 5 | 1 | 767 | 63 | 902 | 0.0 | 1499 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419950 | sp|O24370|LOX21_SOLTU | 58.184 | 782 | 266 | 9 | 44 | 767 | 121 | 899 | 0.0 | 953 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419950 | G7J632 | 88.228 | 841 | 24 | 5 | 1 | 767 | 63 | 902 | 0.0 | 1499 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046860 | Msa0419950 | 0.830724 | 2.499266e-55 | -8.615850e-47 |
| Msa0060720 | Msa0419950 | 0.803945 | 2.735412e-49 | -8.615850e-47 |
| Msa0082340 | Msa0419950 | 0.839807 | 1.270286e-57 | -8.615850e-47 |
| Msa0092390 | Msa0419950 | 0.824172 | 9.320200e-54 | -8.615850e-47 |
| Msa0138800 | Msa0419950 | 0.837077 | 6.431193e-57 | -8.615850e-47 |
| Msa0151780 | Msa0419950 | 0.809491 | 1.843457e-50 | -8.615850e-47 |
| Msa0186380 | Msa0419950 | 0.818226 | 2.188843e-52 | -8.615850e-47 |
| Msa0187560 | Msa0419950 | 0.820773 | 5.745332e-53 | -8.615850e-47 |
| Msa0207150 | Msa0419950 | 0.828961 | 6.717382e-55 | -8.615850e-47 |
| Msa0224980 | Msa0419950 | 0.801207 | 1.003841e-48 | -8.615850e-47 |
| Msa0225030 | Msa0419950 | 0.803314 | 3.699129e-49 | -8.615850e-47 |
| Msa0232170 | Msa0419950 | 0.834453 | 2.970997e-56 | -8.615850e-47 |
| Msa0383110 | Msa0419950 | 0.802219 | 6.224967e-49 | -8.615850e-47 |
| Msa0384570 | Msa0419950 | 0.833337 | 5.650321e-56 | -8.615850e-47 |
| Msa0385870 | Msa0419950 | 0.827652 | 1.389859e-54 | -8.615850e-47 |
| Msa0415860 | Msa0419950 | 0.812178 | 4.831300e-51 | -8.615850e-47 |
| Msa0419950 | Msa0440220 | 0.844248 | 8.505425e-59 | -8.615850e-47 |
| Msa0419950 | Msa0466040 | 0.893368 | 6.708211e-75 | -8.615850e-47 |
| Msa0419950 | Msa0481620 | 0.816937 | 4.275303e-52 | -8.615850e-47 |
| Msa0419950 | Msa0485350 | 0.800413 | 1.458477e-48 | -8.615850e-47 |
| Msa0419950 | Msa0501920 | 0.816826 | 4.527621e-52 | -8.615850e-47 |
| Msa0419950 | Msa0517360 | 0.910187 | 2.480069e-82 | -8.615850e-47 |
| Msa0419950 | Msa0521190 | 0.812360 | 4.409572e-51 | -8.615850e-47 |
| Msa0419950 | Msa0522510 | 0.831364 | 1.740980e-55 | -8.615850e-47 |
| Msa0419950 | Msa0522830 | 0.811449 | 6.961746e-51 | -8.615850e-47 |
| Msa0419950 | Msa0523400 | 0.820328 | 7.267777e-53 | -8.615850e-47 |
| Msa0419950 | Msa0524570 | 0.802673 | 5.017048e-49 | -8.615850e-47 |
| Msa0419950 | Msa0532910 | 0.836297 | 1.016294e-56 | -8.615850e-47 |
| Msa0419950 | Msa0550760 | 0.811010 | 8.668194e-51 | -8.615850e-47 |
| Msa0419950 | Msa0554430 | 0.809057 | 2.283835e-50 | -8.615850e-47 |
| Msa0419950 | Msa0558220 | 0.827457 | 1.548319e-54 | -8.615850e-47 |
| Msa0419950 | Msa0559640 | 0.808918 | 2.445988e-50 | -8.615850e-47 |
| Msa0419950 | Msa0622400 | 0.804333 | 2.271465e-49 | -8.615850e-47 |
| Msa0419950 | Msa0624890 | 0.806415 | 8.316493e-50 | -8.615850e-47 |
| Msa0419950 | Msa0641970 | 0.805064 | 1.598874e-49 | -8.615850e-47 |
| Msa0419950 | Msa0648190 | 0.805492 | 1.300764e-49 | -8.615850e-47 |
| Msa0419950 | Msa0648280 | 0.804985 | 1.660432e-49 | -8.615850e-47 |
| Msa0419950 | Msa0657820 | 0.800381 | 1.480156e-48 | -8.615850e-47 |
| Msa0419950 | Msa0667710 | 0.836515 | 8.945067e-57 | -8.615850e-47 |
| Msa0419950 | Msa0721650 | 0.809506 | 1.829735e-50 | -8.615850e-47 |
| Msa0419950 | Msa0762390 | 0.820720 | 5.909353e-53 | -8.615850e-47 |
| Msa0419950 | Msa0762470 | 0.822591 | 2.182992e-53 | -8.615850e-47 |
| Msa0419950 | Msa0798500 | 0.800202 | 1.609949e-48 | -8.615850e-47 |
| Msa0419950 | Msa0816860 | 0.817833 | 2.685644e-52 | -8.615850e-47 |
| Msa0419950 | Msa0831460 | 0.806283 | 8.869628e-50 | -8.615850e-47 |
| Msa0419950 | Msa0873950 | 0.809538 | 1.800880e-50 | -8.615850e-47 |
| Msa0419950 | Msa0879820 | 0.812390 | 4.343048e-51 | -8.615850e-47 |
| Msa0419950 | Msa0902810 | 0.824383 | 8.317483e-54 | -8.615850e-47 |
| Msa0419950 | Msa0906180 | 0.805273 | 1.445609e-49 | -8.615850e-47 |
| Msa0419950 | Msa0911440 | 0.812775 | 3.577466e-51 | -8.615850e-47 |
| Msa0419950 | Msa0911490 | 0.807121 | 5.899542e-50 | -8.615850e-47 |
| Msa0419950 | Msa0927830 | 0.800860 | 1.182380e-48 | -8.615850e-47 |
| Msa0419950 | Msa0938190 | 0.828029 | 1.128300e-54 | -8.615850e-47 |
| Msa0419950 | Msa0976000 | 0.801773 | 7.687235e-49 | -8.615850e-47 |
| Msa0419950 | Msa0976950 | 0.818678 | 1.729145e-52 | -8.615850e-47 |
| Msa0419950 | Msa0982810 | 0.883138 | 5.783786e-71 | -8.615850e-47 |
| Msa0419950 | Msa1032760 | 0.803458 | 3.452925e-49 | -8.615850e-47 |
| Msa0419950 | Msa1038420 | 0.806356 | 8.559818e-50 | -8.615850e-47 |
| Msa0419950 | Msa1129320 | 0.818602 | 1.798882e-52 | -8.615850e-47 |
| Msa0419950 | Msa1133670 | 0.838234 | 3.245686e-57 | -8.615850e-47 |
| Msa0419950 | Msa1221490 | 0.814052 | 1.875032e-51 | -8.615850e-47 |
| Msa0419950 | Msa1224150 | 0.823433 | 1.388756e-53 | -8.615850e-47 |
| Msa0419950 | Msa1235960 | 0.808119 | 3.621582e-50 | -8.615850e-47 |
| Msa0419950 | Msa1235990 | 0.808794 | 2.599249e-50 | -8.615850e-47 |
| Msa0419950 | Msa1240240 | 0.804428 | 2.170818e-49 | -8.615850e-47 |
| Msa0419950 | Msa1263460 | 0.810126 | 1.346164e-50 | -8.615850e-47 |
| Msa0419950 | Msa1264900 | 0.818086 | 2.354671e-52 | -8.615850e-47 |
| Msa0419950 | Msa1303190 | 0.808403 | 3.151327e-50 | -8.615850e-47 |
| Msa0419950 | Msa1307380 | 0.800169 | 1.635028e-48 | -8.615850e-47 |
| Msa0419950 | Msa1316090 | 0.810193 | 1.301818e-50 | -8.615850e-47 |
| Msa0419950 | Msa1373920 | 0.833842 | 4.226476e-56 | -8.615850e-47 |
| Msa0419950 | Msa1387650 | 0.815564 | 8.667066e-52 | -8.615850e-47 |
| Msa0419950 | Msa1405990 | 0.805465 | 1.317317e-49 | -8.615850e-47 |
| Msa0419950 | Msa1410770 | 0.832469 | 9.287679e-56 | -8.615850e-47 |
| Msa0419950 | Msa1420630 | 0.836316 | 1.005115e-56 | -8.615850e-47 |
| Msa0419950 | Msa1422770 | 0.839790 | 1.283786e-57 | -8.615850e-47 |
| Msa0419950 | Msa1425570 | 0.835995 | 1.212801e-56 | -8.615850e-47 |
| Msa0419950 | Msa1425600 | 0.800235 | 1.585085e-48 | -8.615850e-47 |
| Msa0419950 | Msa1444070 | 0.824814 | 6.583360e-54 | -8.615850e-47 |
| Msa0419950 | Msa1444750 | 0.802356 | 5.832513e-49 | -8.615850e-47 |
| Msa0419950 | Msa1462210 | 0.803005 | 4.285869e-49 | -8.615850e-47 |
| Msa0241560 | Msa0419950 | 0.808617 | 2.836500e-50 | -8.615850e-47 |
| Msa0249670 | Msa0419950 | 0.823935 | 1.059735e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419950 | MtrunA17_Chr3g0118641 | 88.228 | 841 | 24 | 5 | 1 | 767 | 63 | 902 | 0.0 | 1499 |
| Msa0419950 | MtrunA17_Chr3g0118621 | 73.877 | 846 | 137 | 6 | 6 | 767 | 20 | 865 | 0.0 | 1233 |
| Msa0419950 | MtrunA17_Chr3g0118651 | 70.190 | 842 | 175 | 6 | 1 | 767 | 63 | 903 | 0.0 | 1218 |
| Msa0419950 | MtrunA17_Chr4g0033171 | 60.602 | 698 | 239 | 7 | 102 | 767 | 32 | 725 | 0.0 | 881 |
| Msa0419950 | MtrunA17_Chr8g0377101 | 46.572 | 773 | 344 | 12 | 58 | 767 | 150 | 916 | 0.0 | 694 |
| Msa0419950 | MtrunA17_Chr8g0344201 | 44.529 | 786 | 368 | 12 | 43 | 766 | 147 | 926 | 0.0 | 686 |
| Msa0419950 | MtrunA17_Chr1g0205611 | 41.944 | 782 | 375 | 15 | 57 | 767 | 83 | 856 | 0.0 | 587 |
| Msa0419950 | MtrunA17_Chr1g0191921 | 41.731 | 774 | 382 | 10 | 57 | 767 | 91 | 858 | 0.0 | 584 |
| Msa0419950 | MtrunA17_Chr2g0329911 | 39.951 | 811 | 401 | 14 | 29 | 767 | 65 | 861 | 0.0 | 582 |
| Msa0419950 | MtrunA17_Chr8g0343031 | 39.383 | 810 | 405 | 13 | 29 | 767 | 71 | 865 | 0.0 | 578 |
| Msa0419950 | MtrunA17_Chr8g0342881 | 41.688 | 782 | 370 | 15 | 55 | 767 | 92 | 856 | 0.0 | 577 |
| Msa0419950 | MtrunA17_Chr8g0343021 | 39.431 | 809 | 406 | 14 | 29 | 767 | 70 | 864 | 0.0 | 565 |
| Msa0419950 | MtrunA17_Chr8g0343011 | 40.851 | 776 | 380 | 13 | 55 | 767 | 106 | 865 | 0.0 | 565 |
| Msa0419950 | MtrunA17_Chr2g0329901 | 40.000 | 805 | 406 | 13 | 29 | 767 | 70 | 863 | 0.0 | 564 |
| Msa0419950 | MtrunA17_Chr4g0047281 | 41.268 | 773 | 370 | 15 | 52 | 766 | 148 | 894 | 0.0 | 564 |
| Msa0419950 | MtrunA17_Chr8g0342971 | 40.049 | 814 | 408 | 16 | 19 | 767 | 72 | 870 | 0.0 | 558 |
| Msa0419950 | MtrunA17_Chr8g0342921 | 41.138 | 773 | 377 | 15 | 60 | 767 | 110 | 869 | 0.0 | 557 |
| Msa0419950 | MtrunA17_Chr8g0344211 | 39.604 | 808 | 408 | 14 | 29 | 767 | 72 | 868 | 0.0 | 555 |
| Msa0419950 | MtrunA17_Chr8g0342891 | 40.986 | 771 | 381 | 14 | 60 | 767 | 102 | 861 | 0.0 | 550 |
| Msa0419950 | MtrunA17_Chr8g0342931 | 41.339 | 762 | 371 | 15 | 70 | 767 | 1 | 750 | 0.0 | 548 |
| Msa0419950 | MtrunA17_Chr5g0406871 | 38.101 | 811 | 415 | 14 | 29 | 767 | 72 | 867 | 0.0 | 548 |
| Msa0419950 | MtrunA17_Chr7g0272791 | 39.640 | 777 | 397 | 12 | 57 | 767 | 97 | 867 | 0.0 | 548 |
| Msa0419950 | MtrunA17_Chr3g0120071 | 38.760 | 774 | 400 | 13 | 56 | 767 | 97 | 858 | 8.17e-179 | 534 |
| Msa0419950 | MtrunA17_Chr8g0342951 | 39.604 | 808 | 408 | 14 | 29 | 767 | 72 | 868 | 4.82e-177 | 530 |
| Msa0419950 | MtrunA17_Chr8g0342901 | 37.608 | 811 | 411 | 13 | 16 | 767 | 54 | 828 | 2.33e-176 | 526 |
| Msa0419950 | MtrunA17_Chr8g0342981 | 37.978 | 811 | 402 | 19 | 29 | 767 | 42 | 823 | 2.58e-165 | 498 |
| Msa0419950 | MtrunA17_Chr8g0338451 | 36.111 | 756 | 406 | 15 | 60 | 750 | 107 | 850 | 4.55e-160 | 486 |
| Msa0419950 | MtrunA17_Chr8g0343001 | 38.675 | 755 | 364 | 11 | 67 | 767 | 98 | 807 | 4.67e-157 | 476 |
| Msa0419950 | MtrunA17_Chr8g0342991 | 38.391 | 758 | 362 | 13 | 67 | 767 | 98 | 807 | 3.21e-156 | 474 |
| Msa0419950 | MtrunA17_Chr6g0471951 | 35.282 | 496 | 247 | 10 | 262 | 722 | 18 | 474 | 1.17e-97 | 311 |
| Msa0419950 | MtrunA17_Chr8g0344241 | 41.058 | 397 | 202 | 4 | 401 | 767 | 67 | 461 | 2.43e-97 | 310 |
| Msa0419950 | MtrunA17_Chr7g0218231 | 53.782 | 119 | 27 | 1 | 445 | 535 | 14 | 132 | 1.28e-36 | 134 |
| Msa0419950 | MtrunA17_Chr4g0033181 | 40.678 | 118 | 44 | 2 | 16 | 107 | 75 | 192 | 1.20e-18 | 86.3 |
| Msa0419950 | MtrunA17_Chr6g0468081 | 44.944 | 89 | 21 | 1 | 475 | 535 | 1 | 89 | 3.90e-18 | 80.1 |
| Msa0419950 | MtrunA17_Chr4g0047271 | 48.315 | 89 | 45 | 1 | 677 | 764 | 1 | 89 | 2.22e-16 | 75.1 |
| Msa0419950 | MtrunA17_Chr5g0421231 | 73.469 | 49 | 7 | 1 | 184 | 232 | 45 | 87 | 5.02e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419950 | AT3G45140.1 | 50.125 | 798 | 332 | 9 | 29 | 767 | 106 | 896 | 0.0 | 806 |
| Msa0419950 | AT3G45140.2 | 51.643 | 761 | 302 | 9 | 66 | 767 | 1 | 754 | 0.0 | 793 |
| Msa0419950 | AT1G72520.1 | 45.765 | 791 | 359 | 15 | 39 | 767 | 144 | 926 | 0.0 | 692 |
| Msa0419950 | AT1G17420.1 | 44.304 | 790 | 371 | 12 | 39 | 767 | 138 | 919 | 0.0 | 672 |
| Msa0419950 | AT1G67560.1 | 44.659 | 777 | 362 | 15 | 53 | 767 | 147 | 917 | 0.0 | 652 |
| Msa0419950 | AT1G55020.1 | 42.857 | 805 | 377 | 14 | 35 | 767 | 66 | 859 | 0.0 | 610 |
| Msa0419950 | AT3G22400.1 | 40.640 | 812 | 395 | 14 | 37 | 767 | 81 | 886 | 0.0 | 585 |
Find 151 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCATTCCAAAGTTCTTTA+AGG | 0.084556 | 3_2:+68158295 | Msa0419950:CDS |
| CTAGCAATTGTTGGTCTATT+AGG | 0.092716 | 3_2:-68160114 | None:intergenic |
| CATGTTCTTGTTCATGATTC+TGG | 0.145766 | 3_2:+68159125 | Msa0419950:CDS |
| CCAATGACGGTCTTCTAATA+TGG | 0.163070 | 3_2:+68159833 | Msa0419950:CDS |
| TTTGAGTTACCAGCAAATTT+TGG | 0.176746 | 3_2:+68156528 | Msa0419950:CDS |
| AACTTACTCTTGTATGGTTC+CGG | 0.228161 | 3_2:-68158356 | None:intergenic |
| TTAACCAATTGGATGCTATA+TGG | 0.237885 | 3_2:-68158543 | None:intergenic |
| GTGGCCTTTGAAAAGTAAAT+TGG | 0.239348 | 3_2:+68158673 | Msa0419950:CDS |
| ATCAGTGACTATTGCGTCTA+AGG | 0.241076 | 3_2:-68158171 | None:intergenic |
| TGGAAATGTGGGTGCTGTTT+TGG | 0.252907 | 3_2:+68156548 | Msa0419950:CDS |
| TGTACCAAACTAGGTTTAAA+TGG | 0.259190 | 3_2:-68160517 | None:intergenic |
| CTGTGTGTTGCAATTATAAT+AGG | 0.269350 | 3_2:-68159279 | None:intergenic |
| CCAACCAGAGCAAACACTTT+TGG | 0.289754 | 3_2:+68160191 | Msa0419950:CDS |
| TAGCAATTGTTGGTCTATTA+GGG | 0.301680 | 3_2:-68160113 | None:intergenic |
| GTGACTCCAGGCCCTGAAAA+TGG | 0.302315 | 3_2:-68160468 | None:intergenic |
| CTAAAGAATATAGTCCTTGA+TGG | 0.311025 | 3_2:+68156600 | Msa0419950:CDS |
| GAGTCATTGGATTCAAGATT+TGG | 0.317623 | 3_2:-68158257 | None:intergenic |
| ATTCTGATTCCACCAATATC+TGG | 0.318341 | 3_2:+68159081 | Msa0419950:CDS |
| TTTACACAATATGCTTATAT+AGG | 0.319058 | 3_2:+68160084 | Msa0419950:CDS |
| ATTCTGGTGGACCATAGATT+TGG | 0.321973 | 3_2:-68158700 | None:intergenic |
| ATATCCATTTAAACCTAGTT+TGG | 0.337278 | 3_2:+68160513 | Msa0419950:exon |
| TTCACTCCATGTTGTGCATT+AGG | 0.341211 | 3_2:-68159784 | None:intergenic |
| GTGCGACAGCGTCTAGGATA+TGG | 0.341556 | 3_2:-68157835 | None:intergenic |
| AGTGATATACATTTATCATT+TGG | 0.342964 | 3_2:+68160654 | Msa0419950:three_prime_UTR |
| GTTCATTTGATAAAGAATAA+AGG | 0.345576 | 3_2:+68160627 | Msa0419950:three_prime_UTR |
| TCGAAGGGAGAGACAATAAA+AGG | 0.356789 | 3_2:+68156453 | Msa0419950:CDS |
| TCTCTAGTAATTGCTGATTC+TGG | 0.358260 | 3_2:-68158716 | None:intergenic |
| CTCATCAAGAATATTGTTAC+TGG | 0.359156 | 3_2:+68154525 | Msa0419950:CDS |
| CTCAGCTTTCTTAATCCACT+TGG | 0.360020 | 3_2:-68157661 | None:intergenic |
| TTAAGGTGGACCGGGCCATC+AGG | 0.361255 | 3_2:-68156627 | None:intergenic |
| ACTTACTCTTGTATGGTTCC+GGG | 0.363410 | 3_2:-68158355 | None:intergenic |
| TGTTTGAACTTACTCTTGTA+TGG | 0.364028 | 3_2:-68158362 | None:intergenic |
| TGTCCAATGTACTCTTCATC+TGG | 0.364172 | 3_2:-68160282 | None:intergenic |
| AATACTTCTGCCGTATCTTT+AGG | 0.368151 | 3_2:+68158128 | Msa0419950:CDS |
| TTGGAGAAAATTCGAGTCAT+TGG | 0.368346 | 3_2:-68158270 | None:intergenic |
| ATAGTCACTGATATAAATCT+TGG | 0.370327 | 3_2:+68158182 | Msa0419950:CDS |
| CCCACATTTCCAAAATTTGC+TGG | 0.375304 | 3_2:-68156537 | None:intergenic |
| ATTGAGGGAACAACACTATA+TGG | 0.375357 | 3_2:+68158945 | Msa0419950:CDS |
| TTAGCATCCTTAAAGAACTT+TGG | 0.376602 | 3_2:-68158302 | None:intergenic |
| TCTATGTGCTAGATTTGTAT+TGG | 0.384673 | 3_2:+68160572 | Msa0419950:three_prime_UTR |
| TCGAAAAGAATGATATTTCA+AGG | 0.388151 | 3_2:-68159410 | None:intergenic |
| GGGTGAGAATTCAACTATAA+AGG | 0.389284 | 3_2:+68160323 | Msa0419950:CDS |
| ATATTGGTGGAATCAGAATT+AGG | 0.390188 | 3_2:-68159077 | None:intergenic |
| GACCTCAAAAGACCTGTTCT+TGG | 0.394205 | 3_2:+68157796 | Msa0419950:CDS |
| GTACTCCTTTCTTCATATAG+TGG | 0.399010 | 3_2:-68158047 | None:intergenic |
| CATTGTGCCTTGCCATCAAT+AGG | 0.401726 | 3_2:-68159038 | None:intergenic |
| GGTCGAAAGCATTCTGATAC+AGG | 0.402041 | 3_2:+68157859 | Msa0419950:CDS |
| CCACCAATATCTGGCTTTGG+AGG | 0.402930 | 3_2:+68159090 | Msa0419950:CDS |
| AAGCCTCCAAAGCCAGATAT+TGG | 0.404646 | 3_2:-68159093 | None:intergenic |
| TAACCAATTGGATGCTATAT+GGG | 0.408073 | 3_2:-68158542 | None:intergenic |
| ATTCCACCAATATCTGGCTT+TGG | 0.411670 | 3_2:+68159087 | Msa0419950:CDS |
| AAATTGGATGCCCAAATCTA+TGG | 0.413135 | 3_2:+68158689 | Msa0419950:CDS |
| TTGAGGTCAGTGGTTATGTC+AGG | 0.413159 | 3_2:-68157781 | None:intergenic |
| CCATATTAGAAGACCGTCAT+TGG | 0.419135 | 3_2:-68159833 | None:intergenic |
| CATTCCAAAAGTGTTTGCTC+TGG | 0.419934 | 3_2:-68160195 | None:intergenic |
| TTCTGGTGGACCATAGATTT+GGG | 0.421786 | 3_2:-68158699 | None:intergenic |
| GTTTAAATGGATATGCTGTA+TGG | 0.426545 | 3_2:-68160504 | None:intergenic |
| GTCCTTGATGGTTTCCCTGA+TGG | 0.427910 | 3_2:+68156612 | Msa0419950:CDS |
| TTGTAGGGGATAGATTCTTT+TGG | 0.428079 | 3_2:+68158475 | Msa0419950:intron |
| CTCACTAGACCACCTATTGA+TGG | 0.432807 | 3_2:+68159026 | Msa0419950:CDS |
| CCAAAAGTGTTTGCTCTGGT+TGG | 0.436594 | 3_2:-68160191 | None:intergenic |
| TTTCCCATTCTTCCTTAGTA+GGG | 0.440122 | 3_2:-68160158 | None:intergenic |
| TCTAGGATATGGATATTGTT+TGG | 0.442196 | 3_2:-68157824 | None:intergenic |
| AAGACCCTACTAAGGAAGAA+TGG | 0.454559 | 3_2:+68160154 | Msa0419950:CDS |
| TCTCTCAGTTTGCTAACATA+TGG | 0.455221 | 3_2:-68158921 | None:intergenic |
| ATGGGATGCAATTAAACAAT+GGG | 0.457493 | 3_2:+68159852 | Msa0419950:CDS |
| GGGCCTGGAGTCACTGGAAA+AGG | 0.458638 | 3_2:+68160477 | Msa0419950:CDS |
| ATAGAAGCAATTTACAAAGA+AGG | 0.458987 | 3_2:+68158224 | Msa0419950:CDS |
| ATGAACAAGAACATGAGCTT+TGG | 0.461543 | 3_2:-68159117 | None:intergenic |
| TAGACTCAAGGAATGAAGAT+AGG | 0.461905 | 3_2:+68160394 | Msa0419950:CDS |
| AATGGCTTTAATGACTCATA+AGG | 0.463312 | 3_2:-68160450 | None:intergenic |
| GAATCTCTGTCCACCATGCT+TGG | 0.465030 | 3_2:-68159936 | None:intergenic |
| TATGACGTCTACAATGATCT+TGG | 0.466404 | 3_2:+68157754 | Msa0419950:CDS |
| TGTTTGGTGCCACCAAGAAC+AGG | 0.467750 | 3_2:-68157808 | None:intergenic |
| GGCACCAGCCAAAGTCTCTC+TGG | 0.472557 | 3_2:-68158517 | None:intergenic |
| CAATGACGGTCTTCTAATAT+GGG | 0.476498 | 3_2:+68159834 | Msa0419950:CDS |
| CTAATAGAACTAAGAGGGAA+TGG | 0.477908 | 3_2:+68157694 | Msa0419950:CDS |
| GATGAGCTAATAGAACTAAG+AGG | 0.478619 | 3_2:+68157688 | Msa0419950:CDS |
| TCCTTAGTAGGGTCTTCTGT+AGG | 0.479472 | 3_2:-68160147 | None:intergenic |
| AGACCCTACTAAGGAAGAAT+GGG | 0.480218 | 3_2:+68160155 | Msa0419950:CDS |
| TGATGGTTTCCCTGATGGCC+CGG | 0.480524 | 3_2:+68156617 | Msa0419950:CDS |
| TTTGCCAGAGAGACTTTGGC+TGG | 0.481032 | 3_2:+68158513 | Msa0419950:CDS |
| ACTCTTGCATGTACCAAACT+AGG | 0.483070 | 3_2:-68160526 | None:intergenic |
| ATAAGAGTAGTGATGGCAAA+AGG | 0.486600 | 3_2:+68154429 | None:intergenic |
| TAGTCACTGATATAAATCTT+GGG | 0.491052 | 3_2:+68158183 | Msa0419950:CDS |
| GGAATTTGCCAGAGAGACTT+TGG | 0.496070 | 3_2:+68158509 | Msa0419950:CDS |
| TAGCAAACTGAGAGAGATTG+AGG | 0.496616 | 3_2:+68158929 | Msa0419950:CDS |
| CTAGTAATTGCTGATTCTGG+TGG | 0.502077 | 3_2:-68158713 | None:intergenic |
| GATTCAAGAATGTCTGAGCT+TGG | 0.509066 | 3_2:-68159901 | None:intergenic |
| TTGAAGAATAGACATGGAGC+TGG | 0.509740 | 3_2:+68160420 | Msa0419950:CDS |
| CAACCCATATAGCATCCAAT+TGG | 0.511275 | 3_2:+68158539 | Msa0419950:CDS |
| TACTCCTTTCTTCATATAGT+GGG | 0.517291 | 3_2:-68158046 | None:intergenic |
| AGAAGACCGTCATTGGCAAA+AGG | 0.518247 | 3_2:-68159826 | None:intergenic |
| AGATGCTGTCCAAGCTATAG+TGG | 0.518404 | 3_2:-68160040 | None:intergenic |
| CTATTCTTTCTTACTAGTGA+AGG | 0.521142 | 3_2:+68158978 | Msa0419950:CDS |
| AATGTTGCTTGAATTTGTGA+TGG | 0.521479 | 3_2:-68160222 | None:intergenic |
| AGGAGATTGAATGAAATTGA+AGG | 0.525552 | 3_2:+68160366 | Msa0419950:CDS |
| ACATCATTACCACTATAGCT+TGG | 0.532589 | 3_2:+68160031 | Msa0419950:CDS |
| GAACTAAGAGGGAATGGAGA+AGG | 0.533603 | 3_2:+68157700 | Msa0419950:CDS |
| CTCAAAAGACCTGTTCTTGG+TGG | 0.540243 | 3_2:+68157799 | Msa0419950:CDS |
| TTTAAATGGATATGCTGTAT+GGG | 0.542203 | 3_2:-68160503 | None:intergenic |
| AACTTACAGCACAGTTGAAG+AGG | 0.543581 | 3_2:+68158760 | Msa0419950:CDS |
| GCCTACAGAAGACCCTACTA+AGG | 0.543977 | 3_2:+68160146 | Msa0419950:CDS |
| CAGACCCACTATATGAAGAA+AGG | 0.547760 | 3_2:+68158042 | Msa0419950:intron |
| CAATTGGATGCTATATGGGT+TGG | 0.548678 | 3_2:-68158538 | None:intergenic |
| AATCCACTTGGTGTTTGTGA+TGG | 0.549751 | 3_2:-68157649 | None:intergenic |
| TGTAGTCAAGCCTAAAGATA+CGG | 0.551843 | 3_2:-68158138 | None:intergenic |
| CGACCGGTGCGACAGCGTCT+AGG | 0.553844 | 3_2:-68157841 | None:intergenic |
| CGCAACTTTATTGATCTCCA+TGG | 0.555615 | 3_2:-68159358 | None:intergenic |
| GGCCATCAGGGAAACCATCA+AGG | 0.563223 | 3_2:-68156614 | None:intergenic |
| TAAGGTGGACCGGGCCATCA+GGG | 0.564095 | 3_2:-68156626 | None:intergenic |
| TATGGGATGCAATTAAACAA+TGG | 0.570977 | 3_2:+68159851 | Msa0419950:CDS |
| CCTCCAAAGCCAGATATTGG+TGG | 0.572821 | 3_2:-68159090 | None:intergenic |
| GAAGTTCTCATTAATGCAAG+TGG | 0.573211 | 3_2:+68159384 | Msa0419950:CDS |
| TATCCTAGACGCTGTCGCAC+CGG | 0.575164 | 3_2:+68157838 | Msa0419950:CDS |
| TTGAAGGTATTATAGACTCA+AGG | 0.576809 | 3_2:+68160382 | Msa0419950:CDS |
| ATGAGCTAATAGAACTAAGA+GGG | 0.582546 | 3_2:+68157689 | Msa0419950:CDS |
| CTTACTCTTGTATGGTTCCG+GGG | 0.587013 | 3_2:-68158354 | None:intergenic |
| GTTGAATTCTCACCCCAAGA+TGG | 0.587735 | 3_2:-68160315 | None:intergenic |
| AGCAAACTGAGAGAGATTGA+GGG | 0.591240 | 3_2:+68158930 | Msa0419950:CDS |
| ATCTAGCACATAGAAAATGT+AGG | 0.594196 | 3_2:-68160563 | None:intergenic |
| ATCATGAGCTAATAAGCCAT+TGG | 0.594756 | 3_2:+68159150 | Msa0419950:CDS |
| TGTATCAGAATGCTTTCGAC+CGG | 0.595298 | 3_2:-68157857 | None:intergenic |
| TAGACCACCTATTGATGGCA+AGG | 0.603643 | 3_2:+68159031 | Msa0419950:CDS |
| TTACCATCACAAACACCAAG+TGG | 0.605695 | 3_2:+68157646 | Msa0419950:CDS |
| TGTGCCTTGCCATCAATAGG+TGG | 0.607674 | 3_2:-68159035 | None:intergenic |
| CATCCTTTGAAAAGTTACAA+AGG | 0.609574 | 3_2:+68160346 | Msa0419950:CDS |
| GCATGAAGAAGCAAACTCGA+AGG | 0.610739 | 3_2:+68156437 | Msa0419950:intron |
| TCAGCAAATGCCTCGTCACG+AGG | 0.615936 | 3_2:-68158086 | None:intergenic |
| CTTCTATGTTCCTCGTGACG+AGG | 0.615973 | 3_2:+68158076 | Msa0419950:CDS |
| TCCATGGTATATCTCAGATG+TGG | 0.618261 | 3_2:-68159342 | None:intergenic |
| CTAGTGAGCTCAATAGCTAG+TGG | 0.619729 | 3_2:-68159011 | None:intergenic |
| TCACCAGATGAAGAGTACAT+TGG | 0.620155 | 3_2:+68160279 | Msa0419950:CDS |
| CATGAAGAAGCAAACTCGAA+GGG | 0.623114 | 3_2:+68156438 | Msa0419950:intron |
| TATCGTGCGCTTTGATACCC+CGG | 0.626726 | 3_2:+68158337 | Msa0419950:CDS |
| GCTAAGAACTCATTGTGTTG+TGG | 0.627066 | 3_2:+68159254 | Msa0419950:CDS |
| CTGATCAAGAGCTCCAAGCA+TGG | 0.628834 | 3_2:+68159923 | Msa0419950:CDS |
| TGGACAGAGATTCGAACAGT+GGG | 0.633544 | 3_2:+68159946 | Msa0419950:CDS |
| AGGAATTTGAAGAATAGACA+TGG | 0.634907 | 3_2:+68160414 | Msa0419950:CDS |
| CAGTAACAATATTCTTGATG+AGG | 0.640270 | 3_2:-68154524 | None:intergenic |
| CTATTGATGGCAAGGCACAA+TGG | 0.641673 | 3_2:+68159039 | Msa0419950:CDS |
| AAAAGCTTTAGTGAGTGTGA+AGG | 0.645031 | 3_2:+68154488 | Msa0419950:CDS |
| CGGACAAATCTGAAGAACCA+TGG | 0.653620 | 3_2:+68159974 | Msa0419950:CDS |
| TCCACATCTGAGATATACCA+TGG | 0.656207 | 3_2:+68159341 | Msa0419950:CDS |
| GAAGATCCTAATGCACAACA+TGG | 0.666470 | 3_2:+68159778 | Msa0419950:CDS |
| ATCAAGAGCTCCAAGCATGG+TGG | 0.666595 | 3_2:+68159926 | Msa0419950:CDS |
| GATTCGAACAGTGGGACATG+CGG | 0.669148 | 3_2:+68159954 | Msa0419950:CDS |
| GTGGACAGAGATTCGAACAG+TGG | 0.669638 | 3_2:+68159945 | Msa0419950:CDS |
| GTGAGTGTGAAGGAAAGTGA+TGG | 0.706550 | 3_2:+68154498 | Msa0419950:CDS |
| AGTGTGAAGGAAAGTGATGG+TGG | 0.718611 | 3_2:+68154501 | Msa0419950:CDS |
| ACAAATCTGAAGAACCATGG+TGG | 0.731842 | 3_2:+68159977 | Msa0419950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTGAATGAATTTAAAACA+TGG | - | chr3_2:68154805-68154824 | None:intergenic | 15.0% |
| !! | TATTGAATGAATCTATAATA+TGG | + | chr3_2:68154866-68154885 | Msa0419950:intron | 15.0% |
| !! | TATAATTTAAGAGTTCAAAT+GGG | + | chr3_2:68154919-68154938 | Msa0419950:intron | 15.0% |
| !!! | AATTGGTGTAAAAAATTTTA+GGG | - | chr3_2:68155265-68155284 | None:intergenic | 15.0% |
| !!! | AAATTGGTGTAAAAAATTTT+AGG | - | chr3_2:68155266-68155285 | None:intergenic | 15.0% |
| !! | AATCAATAGATAAATATACT+TGG | - | chr3_2:68155490-68155509 | None:intergenic | 15.0% |
| !! | ATCTATATGATGATAAAAAA+TGG | + | chr3_2:68155511-68155530 | Msa0419950:intron | 15.0% |
| !! | TATAATAGATAGATACTTTA+TGG | - | chr3_2:68155540-68155559 | None:intergenic | 15.0% |
| !! | TTTACTAATAAGAAATTCAT+GGG | - | chr3_2:68157107-68157126 | None:intergenic | 15.0% |
| !!! | TTGCATATATTTTTCTTAAT+TGG | + | chr3_2:68157960-68157979 | Msa0419950:intron | 15.0% |
| !! | TATATATAAGTTATTGTGAA+AGG | - | chr3_2:68158606-68158625 | None:intergenic | 15.0% |
| !! | TGAACAAAAAAAAAAAAACT+AGG | - | chr3_2:68158643-68158662 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGTTCATTTGAT+AGG | + | chr3_2:68158649-68158668 | Msa0419950:intron | 15.0% |
| !! | ATTAATCTCATAAACTTACT+TGG | - | chr3_2:68154603-68154622 | None:intergenic | 20.0% |
| !!! | GAATAATTATGATTTGTCAA+TGG | - | chr3_2:68154658-68154677 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTTATGAC+CGG | + | chr3_2:68154890-68154909 | Msa0419950:intron | 20.0% |
| !! | GTATAATTTAAGAGTTCAAA+TGG | + | chr3_2:68154918-68154937 | Msa0419950:intron | 20.0% |
| !! | AAAAACATCATTAACAAAAG+TGG | + | chr3_2:68155005-68155024 | Msa0419950:intron | 20.0% |
| !! | GAGAATAAAACATGTTAAAT+TGG | - | chr3_2:68155282-68155301 | None:intergenic | 20.0% |
| !! | TTAAGGTGTATAATAACATT+GGG | + | chr3_2:68155379-68155398 | Msa0419950:intron | 20.0% |
| !!! | TATACTTGGCATTTAATTTA+TGG | - | chr3_2:68155476-68155495 | None:intergenic | 20.0% |
| !! | AAATATAAAGTCGTCAAAAT+AGG | + | chr3_2:68155587-68155606 | Msa0419950:intron | 20.0% |
| !! | GAATGCATTTAAATTAATTG+TGG | - | chr3_2:68156365-68156384 | None:intergenic | 20.0% |
| !! | AGAAAAATGTGAATAGAAAT+TGG | + | chr3_2:68156828-68156847 | Msa0419950:intron | 20.0% |
| !! | GTTTACTAATAAGAAATTCA+TGG | - | chr3_2:68157108-68157127 | None:intergenic | 20.0% |
| !! | AATAACATACAAACTAAATC+AGG | - | chr3_2:68157599-68157618 | None:intergenic | 20.0% |
| !! | TTTGTTAAATTCAATACTAC+AGG | + | chr3_2:68158848-68158867 | Msa0419950:intron | 20.0% |
| !!! | AATAAGTTAGTTCTAGTTAT+AGG | - | chr3_2:68159213-68159232 | None:intergenic | 20.0% |
| !!! | GTAATTGTTATTTTTCTAAG+AGG | + | chr3_2:68159745-68159764 | Msa0419950:intron | 20.0% |
| !! | TTTACACAATATGCTTATAT+AGG | + | chr3_2:68160084-68160103 | Msa0419950:CDS | 20.0% |
| !! | GTTCATTTGATAAAGAATAA+AGG | + | chr3_2:68160627-68160646 | Msa0419950:three_prime_UTR | 20.0% |
| !! | AGTGATATACATTTATCATT+TGG | + | chr3_2:68160654-68160673 | Msa0419950:three_prime_UTR | 20.0% |
| ! | AATATTGTTACTGGTATTGT+TGG | + | chr3_2:68154534-68154553 | Msa0419950:intron | 25.0% |
| !! | TGGTAACAAACACTTAATTT+TGG | + | chr3_2:68154554-68154573 | Msa0419950:intron | 25.0% |
| !! | ACTATTTGAGTTCAATTGTT+TGG | - | chr3_2:68155042-68155061 | None:intergenic | 25.0% |
| ! | AGAATCCAAATTCGATTATT+AGG | + | chr3_2:68155094-68155113 | Msa0419950:intron | 25.0% |
| ! | TTCTACCTAATAATCGAATT+TGG | - | chr3_2:68155102-68155121 | None:intergenic | 25.0% |
| !! | TAATTTAAAGTTTGGTTGTG+AGG | - | chr3_2:68155145-68155164 | None:intergenic | 25.0% |
| !! | GGTCATAGTAATTTAAAGTT+TGG | - | chr3_2:68155153-68155172 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGCGTTAACTCTT+CGG | - | chr3_2:68155191-68155210 | None:intergenic | 25.0% |
| ! | CTTAAGGTGTATAATAACAT+TGG | + | chr3_2:68155378-68155397 | Msa0419950:intron | 25.0% |
| !! | ATAAAATTTAGGGGTCTTAT+AGG | + | chr3_2:68155834-68155853 | Msa0419950:intron | 25.0% |
| ! | CTCACACAAATTTCTTAAAT+GGG | - | chr3_2:68155976-68155995 | None:intergenic | 25.0% |
| ! | TCTCACACAAATTTCTTAAA+TGG | - | chr3_2:68155977-68155996 | None:intergenic | 25.0% |
| ! | TGTACAAAAAATAGATGTCT+TGG | + | chr3_2:68156061-68156080 | Msa0419950:intron | 25.0% |
| ! | AGAGCTAAATTTCTTTAGTT+TGG | + | chr3_2:68156149-68156168 | Msa0419950:intron | 25.0% |
| ! | CAACAAATATTATGAGACAT+TGG | + | chr3_2:68156319-68156338 | Msa0419950:intron | 25.0% |
| ! | CATATAAATCCTATCCAATT+AGG | - | chr3_2:68156795-68156814 | None:intergenic | 25.0% |
| ! | ATGTGAATAGAAATTGGATT+TGG | + | chr3_2:68156834-68156853 | Msa0419950:intron | 25.0% |
| ! | ATGAGATATGCTACTATATA+CGG | - | chr3_2:68157561-68157580 | None:intergenic | 25.0% |
| !!! | TGTATGTTATTTTTCATGCA+TGG | + | chr3_2:68157608-68157627 | Msa0419950:intron | 25.0% |
| !! | CTTAATTGGTAGTATAATTG+TGG | + | chr3_2:68157974-68157993 | Msa0419950:intron | 25.0% |
| ! | ATAGTCACTGATATAAATCT+TGG | + | chr3_2:68158182-68158201 | Msa0419950:CDS | 25.0% |
| ! | TAGTCACTGATATAAATCTT+GGG | + | chr3_2:68158183-68158202 | Msa0419950:CDS | 25.0% |
| ! | ATAGAAGCAATTTACAAAGA+AGG | + | chr3_2:68158224-68158243 | Msa0419950:CDS | 25.0% |
| ! | AACATCTTATACAACCTAAT+TGG | - | chr3_2:68159182-68159201 | None:intergenic | 25.0% |
| ! | TATATGTTAATTGTGTTTGC+AGG | + | chr3_2:68159232-68159251 | Msa0419950:intron | 25.0% |
| ! | TAATCTAAAAATTGGATGCA+TGG | - | chr3_2:68159316-68159335 | None:intergenic | 25.0% |
| ! | GGATGCAATAATCTAAAAAT+TGG | - | chr3_2:68159324-68159343 | None:intergenic | 25.0% |
| ! | TCGAAAAGAATGATATTTCA+AGG | - | chr3_2:68159413-68159432 | None:intergenic | 25.0% |
| !! | CTTTTCGAATAAGTATACAA+TGG | + | chr3_2:68159425-68159444 | Msa0419950:intron | 25.0% |
| ! | TTCCAAATGATCTTATCAAT+AGG | + | chr3_2:68159499-68159518 | Msa0419950:intron | 25.0% |
| ! | TACCTATTGATAAGATCATT+TGG | - | chr3_2:68159504-68159523 | None:intergenic | 25.0% |
| ! | AATTGAATGTAAACATGTCT+TGG | + | chr3_2:68159632-68159651 | Msa0419950:intron | 25.0% |
| ! | ACGTAAGTTAATATTCAATG+TGG | - | chr3_2:68159727-68159746 | None:intergenic | 25.0% |
| !!! | TGTTATTTTTCTAAGAGGAA+TGG | + | chr3_2:68159750-68159769 | Msa0419950:intron | 25.0% |
| !!! | TCATTTTGTGTTTTGAGATT+TGG | - | chr3_2:68160003-68160022 | None:intergenic | 25.0% |
| !!! | ATTTTCTTTCTAGCAATTGT+TGG | - | chr3_2:68160126-68160145 | None:intergenic | 25.0% |
| ! | TTTAAATGGATATGCTGTAT+GGG | - | chr3_2:68160506-68160525 | None:intergenic | 25.0% |
| ! | ATATCCATTTAAACCTAGTT+TGG | + | chr3_2:68160513-68160532 | Msa0419950:exon | 25.0% |
| CAGTAACAATATTCTTGATG+AGG | - | chr3_2:68154527-68154546 | None:intergenic | 30.0% | |
| CTCATCAAGAATATTGTTAC+TGG | + | chr3_2:68154525-68154544 | Msa0419950:CDS | 30.0% | |
| TCTGATCTCAATATCTCTTA+AGG | + | chr3_2:68155362-68155381 | Msa0419950:intron | 30.0% | |
| ACTTCCGTCAACAAAAAAAA+AGG | + | chr3_2:68155654-68155673 | Msa0419950:intron | 30.0% | |
| !!! | TGAGCCTTTTTTTTTGTTGA+CGG | - | chr3_2:68155661-68155680 | None:intergenic | 30.0% |
| AAAAAAAAGGCTCACAAAAG+TGG | + | chr3_2:68155667-68155686 | Msa0419950:intron | 30.0% | |
| AAAAAAAGGCTCACAAAAGT+GGG | + | chr3_2:68155668-68155687 | Msa0419950:intron | 30.0% | |
| ATGGTCTAACTAAGATCATT+TGG | - | chr3_2:68155776-68155795 | None:intergenic | 30.0% | |
| CATCGGGAAGATAAAATTTA+GGG | + | chr3_2:68155824-68155843 | Msa0419950:intron | 30.0% | |
| ATCGGGAAGATAAAATTTAG+GGG | + | chr3_2:68155825-68155844 | Msa0419950:intron | 30.0% | |
| TAACTCTTAAGTAAGACCAT+GGG | - | chr3_2:68155861-68155880 | None:intergenic | 30.0% | |
| TTAACTCTTAAGTAAGACCA+TGG | - | chr3_2:68155862-68155881 | None:intergenic | 30.0% | |
| GAATCAGTTGTCAACATTTA+AGG | + | chr3_2:68156123-68156142 | Msa0419950:intron | 30.0% | |
| TACCAAAATGTGAACTCATT+TGG | + | chr3_2:68156181-68156200 | Msa0419950:intron | 30.0% | |
| ! | AACCAAATGAGTTCACATTT+TGG | - | chr3_2:68156186-68156205 | None:intergenic | 30.0% |
| AAAATGTGAACTCATTTGGT+TGG | + | chr3_2:68156185-68156204 | Msa0419950:intron | 30.0% | |
| TAGTCGATCAAAATTAGTAG+CGG | - | chr3_2:68156254-68156273 | None:intergenic | 30.0% | |
| TTTGCTTCTTCATGCAAATA+AGG | - | chr3_2:68156432-68156451 | None:intergenic | 30.0% | |
| AACAGAGAAAAAAGAGAAAG+AGG | + | chr3_2:68156488-68156507 | Msa0419950:CDS | 30.0% | |
| !! | TTTGAGTTACCAGCAAATTT+TGG | + | chr3_2:68156528-68156547 | Msa0419950:CDS | 30.0% |
| CTAAAGAATATAGTCCTTGA+TGG | + | chr3_2:68156600-68156619 | Msa0419950:CDS | 30.0% | |
| GAATCCATGATTGACAATTA+AGG | - | chr3_2:68156647-68156666 | None:intergenic | 30.0% | |
| GGTAACGATGTTAATACATT+AGG | + | chr3_2:68156713-68156732 | Msa0419950:intron | 30.0% | |
| TAAATCCTATCCAATTAGGT+GGG | - | chr3_2:68156791-68156810 | None:intergenic | 30.0% | |
| ATAAATCCTATCCAATTAGG+TGG | - | chr3_2:68156792-68156811 | None:intergenic | 30.0% | |
| TGAATAGAAATTGGATTTGG+TGG | + | chr3_2:68156837-68156856 | Msa0419950:intron | 30.0% | |
| ACCTATTGAACATACAAGAT+GGG | - | chr3_2:68157186-68157205 | None:intergenic | 30.0% | |
| AACCTATTGAACATACAAGA+TGG | - | chr3_2:68157187-68157206 | None:intergenic | 30.0% | |
| !!! | AGATTTTTTACCGCTAAACA+AGG | + | chr3_2:68157215-68157234 | Msa0419950:intron | 30.0% |
| ! | TTTTTGGATTACCACGATAT+AGG | - | chr3_2:68157254-68157273 | None:intergenic | 30.0% |
| !!! | CAATGGCTTGATAGTTTTTT+TGG | - | chr3_2:68157270-68157289 | None:intergenic | 30.0% |
| ! | ATCAACTAGTCTATCAACAA+TGG | - | chr3_2:68157287-68157306 | None:intergenic | 30.0% |
| TCTTGTGTGTTTCAAATGTT+GGG | - | chr3_2:68157338-68157357 | None:intergenic | 30.0% | |
| TTCTTGTGTGTTTCAAATGT+TGG | - | chr3_2:68157339-68157358 | None:intergenic | 30.0% | |
| !!! | AAAGTTTTGAGCAAACTCAA+AGG | - | chr3_2:68157474-68157493 | None:intergenic | 30.0% |
| ! | TGAGTTTGCTCAAAACTTTA+AGG | + | chr3_2:68157475-68157494 | Msa0419950:intron | 30.0% |
| !! | ACTTTAAGGCATTAGACATA+TGG | + | chr3_2:68157489-68157508 | Msa0419950:intron | 30.0% |
| ATGAGCTAATAGAACTAAGA+GGG | + | chr3_2:68157689-68157708 | Msa0419950:CDS | 30.0% | |
| ! | TCTAGGATATGGATATTGTT+TGG | - | chr3_2:68157827-68157846 | None:intergenic | 30.0% |
| !! | GATATGTAAGCATTGAGAAT+AGG | - | chr3_2:68157888-68157907 | None:intergenic | 30.0% |
| TACTCCTTTCTTCATATAGT+GGG | - | chr3_2:68158049-68158068 | None:intergenic | 30.0% | |
| !!! | AGAACTTTGGAATGAGTTTT+TGG | - | chr3_2:68158292-68158311 | None:intergenic | 30.0% |
| ACTCATTCCAAAGTTCTTTA+AGG | + | chr3_2:68158295-68158314 | Msa0419950:CDS | 30.0% | |
| TTAGCATCCTTAAAGAACTT+TGG | - | chr3_2:68158305-68158324 | None:intergenic | 30.0% | |
| TGTTTGAACTTACTCTTGTA+TGG | - | chr3_2:68158365-68158384 | None:intergenic | 30.0% | |
| TGAACTTAACTGTCATGAAA+TGG | + | chr3_2:68158407-68158426 | Msa0419950:intron | 30.0% | |
| !!! | ATTCTTTTGGTTTTCAGATG+TGG | + | chr3_2:68158488-68158507 | Msa0419950:CDS | 30.0% |
| TAACCAATTGGATGCTATAT+GGG | - | chr3_2:68158545-68158564 | None:intergenic | 30.0% | |
| TTAACCAATTGGATGCTATA+TGG | - | chr3_2:68158546-68158565 | None:intergenic | 30.0% | |
| ATATAGCATCCAATTGGTTA+AGG | + | chr3_2:68158545-68158564 | Msa0419950:intron | 30.0% | |
| ! | TTTTGTTCATTTGATAGGAG+TGG | + | chr3_2:68158654-68158673 | Msa0419950:intron | 30.0% |
| !! | GCATCCAATTTACTTTTCAA+AGG | - | chr3_2:68158680-68158699 | None:intergenic | 30.0% |
| CTATTCTTTCTTACTAGTGA+AGG | + | chr3_2:68158978-68158997 | Msa0419950:CDS | 30.0% | |
| ATATTGGTGGAATCAGAATT+AGG | - | chr3_2:68159080-68159099 | None:intergenic | 30.0% | |
| CTGTGTGTTGCAATTATAAT+AGG | - | chr3_2:68159282-68159301 | None:intergenic | 30.0% | |
| ATGTAAACATGTCTTGGTTT+CGG | + | chr3_2:68159638-68159657 | Msa0419950:intron | 30.0% | |
| ! | CAATGTGGTTTTCATAAAGA+AGG | - | chr3_2:68159712-68159731 | None:intergenic | 30.0% |
| TATGGGATGCAATTAAACAA+TGG | + | chr3_2:68159851-68159870 | Msa0419950:CDS | 30.0% | |
| ATGGGATGCAATTAAACAAT+GGG | + | chr3_2:68159852-68159871 | Msa0419950:CDS | 30.0% | |
| ! | TAGCAATTGTTGGTCTATTA+GGG | - | chr3_2:68160116-68160135 | None:intergenic | 30.0% |
| ! | AATGTTGCTTGAATTTGTGA+TGG | - | chr3_2:68160225-68160244 | None:intergenic | 30.0% |
| ACAAAAAATAGAGCCATCTT+GGG | + | chr3_2:68160302-68160321 | Msa0419950:CDS | 30.0% | |
| ! | CATCCTTTGAAAAGTTACAA+AGG | + | chr3_2:68160346-68160365 | Msa0419950:CDS | 30.0% |
| ! | TCTCCTTTGTAACTTTTCAA+AGG | - | chr3_2:68160352-68160371 | None:intergenic | 30.0% |
| AGGAGATTGAATGAAATTGA+AGG | + | chr3_2:68160366-68160385 | Msa0419950:CDS | 30.0% | |
| !! | TTGAAGGTATTATAGACTCA+AGG | + | chr3_2:68160382-68160401 | Msa0419950:CDS | 30.0% |
| AGGAATTTGAAGAATAGACA+TGG | + | chr3_2:68160414-68160433 | Msa0419950:CDS | 30.0% | |
| !! | AATGGCTTTAATGACTCATA+AGG | - | chr3_2:68160453-68160472 | None:intergenic | 30.0% |
| !! | AGTCATTAAAGCCATTTTCA+GGG | + | chr3_2:68160457-68160476 | Msa0419950:CDS | 30.0% |
| GTTTAAATGGATATGCTGTA+TGG | - | chr3_2:68160507-68160526 | None:intergenic | 30.0% | |
| TGTACCAAACTAGGTTTAAA+TGG | - | chr3_2:68160520-68160539 | None:intergenic | 30.0% | |
| ATCTAGCACATAGAAAATGT+AGG | - | chr3_2:68160566-68160585 | None:intergenic | 30.0% | |
| TCTATGTGCTAGATTTGTAT+TGG | + | chr3_2:68160572-68160591 | Msa0419950:three_prime_UTR | 30.0% | |
| ! | AAAAGCTTTAGTGAGTGTGA+AGG | + | chr3_2:68154488-68154507 | Msa0419950:CDS | 35.0% |
| TGCTTATATTTGTGACCAGA+GGG | - | chr3_2:68154777-68154796 | None:intergenic | 35.0% | |
| TTGCTTATATTTGTGACCAG+AGG | - | chr3_2:68154778-68154797 | None:intergenic | 35.0% | |
| TTGCTTATATTTATGACCGG+AGG | + | chr3_2:68154893-68154912 | Msa0419950:intron | 35.0% | |
| TGCTTATATTTATGACCGGA+GGG | + | chr3_2:68154894-68154913 | Msa0419950:intron | 35.0% | |
| CTCTTAAATTATACACCCTC+CGG | - | chr3_2:68154912-68154931 | None:intergenic | 35.0% | |
| TAAGTTGTGACATGGAAAGA+TGG | - | chr3_2:68154962-68154981 | None:intergenic | 35.0% | |
| ! | CTGATAGTTAAGTTGTGACA+TGG | - | chr3_2:68154970-68154989 | None:intergenic | 35.0% |
| TTTGGTTGTGAGGTAAGAAT+AGG | - | chr3_2:68155135-68155154 | None:intergenic | 35.0% | |
| ATAATAACATTGGGTGTGCA+AGG | + | chr3_2:68155388-68155407 | Msa0419950:intron | 35.0% | |
| CTTAGTTAGACCATTTCCAA+TGG | + | chr3_2:68155782-68155801 | Msa0419950:intron | 35.0% | |
| ! | CCTAAATTTTATCTTCCCGA+TGG | - | chr3_2:68155826-68155845 | None:intergenic | 35.0% |
| CCATCGGGAAGATAAAATTT+AGG | + | chr3_2:68155823-68155842 | Msa0419950:intron | 35.0% | |
| TGTGGATCTCACTTAAGAAT+GGG | - | chr3_2:68155888-68155907 | None:intergenic | 35.0% | |
| ATGTGGATCTCACTTAAGAA+TGG | - | chr3_2:68155889-68155908 | None:intergenic | 35.0% | |
| ! | TGACAACTGATTCATGACAA+TGG | - | chr3_2:68156116-68156135 | None:intergenic | 35.0% |
| !! | ATTGAGAGAAGTATTCTCCA+AGG | - | chr3_2:68156221-68156240 | None:intergenic | 35.0% |
| ! | AAATTAGTAGCGGGAAGAAA+CGG | - | chr3_2:68156244-68156263 | None:intergenic | 35.0% |
| AGTCGATCAAAATTAGTAGC+GGG | - | chr3_2:68156253-68156272 | None:intergenic | 35.0% | |
| TCTTCATGCAAATAAGGTTG+CGG | - | chr3_2:68156426-68156445 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTCTGTTTCGTGTG+CGG | - | chr3_2:68156481-68156500 | None:intergenic | 35.0% |
| !! | ACCAGCAAATTTTGGAAATG+TGG | + | chr3_2:68156536-68156555 | Msa0419950:CDS | 35.0% |
| !! | CCAGCAAATTTTGGAAATGT+GGG | + | chr3_2:68156537-68156556 | Msa0419950:CDS | 35.0% |
| TCCACCTTAATTGTCAATCA+TGG | + | chr3_2:68156640-68156659 | Msa0419950:intron | 35.0% | |
| TCCATGATTGACAATTAAGG+TGG | - | chr3_2:68156644-68156663 | None:intergenic | 35.0% | |
| !! | TTTGTAGGAGTATCATGCTT+AGG | - | chr3_2:68156672-68156691 | None:intergenic | 35.0% |
| GTGAAGAAAACTCTCTTTGT+AGG | - | chr3_2:68156687-68156706 | None:intergenic | 35.0% | |
| ! | GAGAGTTTTCTTCACTAACA+AGG | + | chr3_2:68156692-68156711 | Msa0419950:intron | 35.0% |
| ACTAACACACTCATGCATAT+GGG | + | chr3_2:68156744-68156763 | Msa0419950:intron | 35.0% | |
| TCTGATCTTAATCCAACTAC+CGG | + | chr3_2:68156974-68156993 | Msa0419950:intron | 35.0% | |
| ACCCATCTTGTATGTTCAAT+AGG | + | chr3_2:68157182-68157201 | Msa0419950:intron | 35.0% | |
| !!! | TTTTTTACCGCTAAACAAGG+TGG | + | chr3_2:68157218-68157237 | Msa0419950:intron | 35.0% |
| GAAGTTTCATACCTATATCG+TGG | + | chr3_2:68157240-68157259 | Msa0419950:intron | 35.0% | |
| GACTCAACAAGGATATAGTT+GGG | - | chr3_2:68157406-68157425 | None:intergenic | 35.0% | |
| ! | TGCTACTATATACGGATTGT+CGG | - | chr3_2:68157553-68157572 | None:intergenic | 35.0% |
| GATGAGCTAATAGAACTAAG+AGG | + | chr3_2:68157688-68157707 | Msa0419950:CDS | 35.0% | |
| CTAATAGAACTAAGAGGGAA+TGG | + | chr3_2:68157694-68157713 | Msa0419950:CDS | 35.0% | |
| TATGACGTCTACAATGATCT+TGG | + | chr3_2:68157754-68157773 | Msa0419950:CDS | 35.0% | |
| GTACTCCTTTCTTCATATAG+TGG | - | chr3_2:68158050-68158069 | None:intergenic | 35.0% | |
| AATACTTCTGCCGTATCTTT+AGG | + | chr3_2:68158128-68158147 | Msa0419950:CDS | 35.0% | |
| TGTAGTCAAGCCTAAAGATA+CGG | - | chr3_2:68158141-68158160 | None:intergenic | 35.0% | |
| GAGTCATTGGATTCAAGATT+TGG | - | chr3_2:68158260-68158279 | None:intergenic | 35.0% | |
| TTGGAGAAAATTCGAGTCAT+TGG | - | chr3_2:68158273-68158292 | None:intergenic | 35.0% | |
| AACTTACTCTTGTATGGTTC+CGG | - | chr3_2:68158359-68158378 | None:intergenic | 35.0% | |
| ATCAATGTGAATATGTGCCT+CGG | + | chr3_2:68158450-68158469 | Msa0419950:intron | 35.0% | |
| ! | TTGTAGGGGATAGATTCTTT+TGG | + | chr3_2:68158475-68158494 | Msa0419950:intron | 35.0% |
| ! | GTGGCCTTTGAAAAGTAAAT+TGG | + | chr3_2:68158673-68158692 | Msa0419950:CDS | 35.0% |
| AAATTGGATGCCCAAATCTA+TGG | + | chr3_2:68158689-68158708 | Msa0419950:CDS | 35.0% | |
| !! | TCTCTAGTAATTGCTGATTC+TGG | - | chr3_2:68158719-68158738 | None:intergenic | 35.0% |
| !! | TCTCTCAGTTTGCTAACATA+TGG | - | chr3_2:68158924-68158943 | None:intergenic | 35.0% |
| ATTGAGGGAACAACACTATA+TGG | + | chr3_2:68158945-68158964 | Msa0419950:CDS | 35.0% | |
| ATTCTGATTCCACCAATATC+TGG | + | chr3_2:68159081-68159100 | Msa0419950:CDS | 35.0% | |
| ATGAACAAGAACATGAGCTT+TGG | - | chr3_2:68159120-68159139 | None:intergenic | 35.0% | |
| CATGTTCTTGTTCATGATTC+TGG | + | chr3_2:68159125-68159144 | Msa0419950:CDS | 35.0% | |
| ATCATGAGCTAATAAGCCAT+TGG | + | chr3_2:68159150-68159169 | Msa0419950:CDS | 35.0% | |
| GAAGTTCTCATTAATGCAAG+TGG | + | chr3_2:68159384-68159403 | Msa0419950:CDS | 35.0% | |
| CTGTGGCATATGATAATCTT+TGG | + | chr3_2:68159457-68159476 | Msa0419950:intron | 35.0% | |
| !! | TCTTTGGCAATTTGATTTGC+AGG | + | chr3_2:68159473-68159492 | Msa0419950:intron | 35.0% |
| CAATGACGGTCTTCTAATAT+GGG | + | chr3_2:68159834-68159853 | Msa0419950:CDS | 35.0% | |
| ACATCATTACCACTATAGCT+TGG | + | chr3_2:68160031-68160050 | Msa0419950:CDS | 35.0% | |
| ! | CTAGCAATTGTTGGTCTATT+AGG | - | chr3_2:68160117-68160136 | None:intergenic | 35.0% |
| TTTCCCATTCTTCCTTAGTA+GGG | - | chr3_2:68160161-68160180 | None:intergenic | 35.0% | |
| ! | TTTTCCCATTCTTCCTTAGT+AGG | - | chr3_2:68160162-68160181 | None:intergenic | 35.0% |
| GACAAAAAATAGAGCCATCT+TGG | + | chr3_2:68160301-68160320 | Msa0419950:CDS | 35.0% | |
| CAAAAAATAGAGCCATCTTG+GGG | + | chr3_2:68160303-68160322 | Msa0419950:CDS | 35.0% | |
| GGGTGAGAATTCAACTATAA+AGG | + | chr3_2:68160323-68160342 | Msa0419950:CDS | 35.0% | |
| TAGACTCAAGGAATGAAGAT+AGG | + | chr3_2:68160394-68160413 | Msa0419950:CDS | 35.0% | |
| !! | GAGTCATTAAAGCCATTTTC+AGG | + | chr3_2:68160456-68160475 | Msa0419950:CDS | 35.0% |
| TTGTGACATGGAAAGATGGA+GGG | - | chr3_2:68154958-68154977 | None:intergenic | 40.0% | |
| TCTCACAAACGATTCGTCAT+TGG | - | chr3_2:68155077-68155096 | None:intergenic | 40.0% | |
| ! | TACTATGACCCTTTTCCGTT+AGG | + | chr3_2:68155163-68155182 | Msa0419950:intron | 40.0% |
| GTTAACTCTTCGGTTCCTAA+CGG | - | chr3_2:68155181-68155200 | None:intergenic | 40.0% | |
| AGAGAAATATGATCGGAAGG+TGG | - | chr3_2:68155319-68155338 | None:intergenic | 40.0% | |
| AGAGATAGACAAAGAGAGAG+GGG | - | chr3_2:68155343-68155362 | None:intergenic | 40.0% | |
| GAGAGATAGACAAAGAGAGA+GGG | - | chr3_2:68155344-68155363 | None:intergenic | 40.0% | |
| AGAGAGATAGACAAAGAGAG+AGG | - | chr3_2:68155345-68155364 | None:intergenic | 40.0% | |
| AGTTAGACCATTTCCAATGG+AGG | + | chr3_2:68155785-68155804 | Msa0419950:intron | 40.0% | |
| GTGGATCTCACTTAAGAATG+GGG | - | chr3_2:68155887-68155906 | None:intergenic | 40.0% | |
| GGAGGGATTGAGTGTTTATT+AGG | + | chr3_2:68156006-68156025 | Msa0419950:intron | 40.0% | |
| ! | CAACTGATTCATGACAATGG+TGG | - | chr3_2:68156113-68156132 | None:intergenic | 40.0% |
| TTCATGCAAATAAGGTTGCG+GGG | - | chr3_2:68156424-68156443 | None:intergenic | 40.0% | |
| CTTCATGCAAATAAGGTTGC+GGG | - | chr3_2:68156425-68156444 | None:intergenic | 40.0% | |
| CATGAAGAAGCAAACTCGAA+GGG | + | chr3_2:68156438-68156457 | Msa0419950:intron | 40.0% | |
| TCGAAGGGAGAGACAATAAA+AGG | + | chr3_2:68156453-68156472 | Msa0419950:CDS | 40.0% | |
| CCCACATTTCCAAAATTTGC+TGG | - | chr3_2:68156540-68156559 | None:intergenic | 40.0% | |
| ATTGACAATTAAGGTGGACC+GGG | - | chr3_2:68156638-68156657 | None:intergenic | 40.0% | |
| GATTGACAATTAAGGTGGAC+CGG | - | chr3_2:68156639-68156658 | None:intergenic | 40.0% | |
| CACTAACACACTCATGCATA+TGG | + | chr3_2:68156743-68156762 | Msa0419950:intron | 40.0% | |
| ! | TGGGTCGCACTAAATTTTGT+TGG | + | chr3_2:68156763-68156782 | Msa0419950:intron | 40.0% |
| ! | GGGTCGCACTAAATTTTGTT+GGG | + | chr3_2:68156764-68156783 | Msa0419950:intron | 40.0% |
| AACAATCACCGATGTTTGGA+TGG | - | chr3_2:68156876-68156895 | None:intergenic | 40.0% | |
| GATCAACAATCACCGATGTT+TGG | - | chr3_2:68156880-68156899 | None:intergenic | 40.0% | |
| GATTGTTGATCTCGCACTAA+TGG | + | chr3_2:68156889-68156908 | Msa0419950:intron | 40.0% | |
| CTGCGTCAAATTGTTAACTC+CGG | + | chr3_2:68157004-68157023 | Msa0419950:intron | 40.0% | |
| AACTCTTAAGCAAGCAAGTC+AGG | + | chr3_2:68157125-68157144 | Msa0419950:intron | 40.0% | |
| ACTCTTAAGCAAGCAAGTCA+GGG | + | chr3_2:68157126-68157145 | Msa0419950:intron | 40.0% | |
| ! | GAAACTTCCACCTTGTTTAG+CGG | - | chr3_2:68157228-68157247 | None:intergenic | 40.0% |
| TATAGTTGGGACTAGGGAAT+GGG | - | chr3_2:68157393-68157412 | None:intergenic | 40.0% | |
| ATATAGTTGGGACTAGGGAA+TGG | - | chr3_2:68157394-68157413 | None:intergenic | 40.0% | |
| CAAGGATATAGTTGGGACTA+GGG | - | chr3_2:68157399-68157418 | None:intergenic | 40.0% | |
| ACAAGGATATAGTTGGGACT+AGG | - | chr3_2:68157400-68157419 | None:intergenic | 40.0% | |
| CGACTCAACAAGGATATAGT+TGG | - | chr3_2:68157407-68157426 | None:intergenic | 40.0% | |
| TTACCATCACAAACACCAAG+TGG | + | chr3_2:68157646-68157665 | Msa0419950:CDS | 40.0% | |
| !! | AATCCACTTGGTGTTTGTGA+TGG | - | chr3_2:68157652-68157671 | None:intergenic | 40.0% |
| CTCAGCTTTCTTAATCCACT+TGG | - | chr3_2:68157664-68157683 | None:intergenic | 40.0% | |
| TGTATCAGAATGCTTTCGAC+CGG | - | chr3_2:68157860-68157879 | None:intergenic | 40.0% | |
| CAGACCCACTATATGAAGAA+AGG | + | chr3_2:68158042-68158061 | Msa0419950:intron | 40.0% | |
| ATCAGTGACTATTGCGTCTA+AGG | - | chr3_2:68158174-68158193 | None:intergenic | 40.0% | |
| ACTTACTCTTGTATGGTTCC+GGG | - | chr3_2:68158358-68158377 | None:intergenic | 40.0% | |
| AATATGTGCCTCGGAATTGT+AGG | + | chr3_2:68158459-68158478 | Msa0419950:intron | 40.0% | |
| ATATGTGCCTCGGAATTGTA+GGG | + | chr3_2:68158460-68158479 | Msa0419950:intron | 40.0% | |
| CAATTGGATGCTATATGGGT+TGG | - | chr3_2:68158541-68158560 | None:intergenic | 40.0% | |
| CAACCCATATAGCATCCAAT+TGG | + | chr3_2:68158539-68158558 | Msa0419950:CDS | 40.0% | |
| ATGTCCATGCCTTAACCAAT+TGG | - | chr3_2:68158557-68158576 | None:intergenic | 40.0% | |
| ! | TTCTGGTGGACCATAGATTT+GGG | - | chr3_2:68158702-68158721 | None:intergenic | 40.0% |
| ! | ATTCTGGTGGACCATAGATT+TGG | - | chr3_2:68158703-68158722 | None:intergenic | 40.0% |
| !! | CTAGTAATTGCTGATTCTGG+TGG | - | chr3_2:68158716-68158735 | None:intergenic | 40.0% |
| AACTTACAGCACAGTTGAAG+AGG | + | chr3_2:68158760-68158779 | Msa0419950:CDS | 40.0% | |
| TAGCAAACTGAGAGAGATTG+AGG | + | chr3_2:68158929-68158948 | Msa0419950:CDS | 40.0% | |
| AGCAAACTGAGAGAGATTGA+GGG | + | chr3_2:68158930-68158949 | Msa0419950:CDS | 40.0% | |
| ! | ATTCCACCAATATCTGGCTT+TGG | + | chr3_2:68159087-68159106 | Msa0419950:CDS | 40.0% |
| ACCTAATTGGTACTCACCAA+TGG | - | chr3_2:68159169-68159188 | None:intergenic | 40.0% | |
| GCTAAGAACTCATTGTGTTG+TGG | + | chr3_2:68159254-68159273 | Msa0419950:CDS | 40.0% | |
| ! | TCCACATCTGAGATATACCA+TGG | + | chr3_2:68159341-68159360 | Msa0419950:CDS | 40.0% |
| TCCATGGTATATCTCAGATG+TGG | - | chr3_2:68159345-68159364 | None:intergenic | 40.0% | |
| CGCAACTTTATTGATCTCCA+TGG | - | chr3_2:68159361-68159380 | None:intergenic | 40.0% | |
| TACAATGGAGTTAAGCTCTG+TGG | + | chr3_2:68159440-68159459 | Msa0419950:intron | 40.0% | |
| CACTAAATCAGACACCAGAT+AGG | + | chr3_2:68159559-68159578 | Msa0419950:intron | 40.0% | |
| GTCAGTATTAGTGTCCTATC+TGG | - | chr3_2:68159576-68159595 | None:intergenic | 40.0% | |
| !! | TTTTCTAAGAGGAATGGCTG+TGG | + | chr3_2:68159756-68159775 | Msa0419950:intron | 40.0% |
| GAAGATCCTAATGCACAACA+TGG | + | chr3_2:68159778-68159797 | Msa0419950:CDS | 40.0% | |
| TTCACTCCATGTTGTGCATT+AGG | - | chr3_2:68159787-68159806 | None:intergenic | 40.0% | |
| ! | GACTATCCTTTTGCCAATGA+CGG | + | chr3_2:68159820-68159839 | Msa0419950:CDS | 40.0% |
| CCATATTAGAAGACCGTCAT+TGG | - | chr3_2:68159836-68159855 | None:intergenic | 40.0% | |
| CCAATGACGGTCTTCTAATA+TGG | + | chr3_2:68159833-68159852 | Msa0419950:CDS | 40.0% | |
| GATTCAAGAATGTCTGAGCT+TGG | - | chr3_2:68159904-68159923 | None:intergenic | 40.0% | |
| ACAAATCTGAAGAACCATGG+TGG | + | chr3_2:68159977-68159996 | Msa0419950:CDS | 40.0% | |
| AAGACCCTACTAAGGAAGAA+TGG | + | chr3_2:68160154-68160173 | Msa0419950:CDS | 40.0% | |
| AGACCCTACTAAGGAAGAAT+GGG | + | chr3_2:68160155-68160174 | Msa0419950:CDS | 40.0% | |
| !! | CATTCCAAAAGTGTTTGCTC+TGG | - | chr3_2:68160198-68160217 | None:intergenic | 40.0% |
| ! | TCACCAGATGAAGAGTACAT+TGG | + | chr3_2:68160279-68160298 | Msa0419950:CDS | 40.0% |
| TGTCCAATGTACTCTTCATC+TGG | - | chr3_2:68160285-68160304 | None:intergenic | 40.0% | |
| TTGAAGAATAGACATGGAGC+TGG | + | chr3_2:68160420-68160439 | Msa0419950:CDS | 40.0% | |
| ACTCTTGCATGTACCAAACT+AGG | - | chr3_2:68160529-68160548 | None:intergenic | 40.0% | |
| GTGAGTGTGAAGGAAAGTGA+TGG | + | chr3_2:68154498-68154517 | Msa0419950:CDS | 45.0% | |
| AGTGTGAAGGAAAGTGATGG+TGG | + | chr3_2:68154501-68154520 | Msa0419950:CDS | 45.0% | |
| TGTATGCAGTATACACCCTC+TGG | + | chr3_2:68154759-68154778 | Msa0419950:intron | 45.0% | |
| GTTGTGACATGGAAAGATGG+AGG | - | chr3_2:68154959-68154978 | None:intergenic | 45.0% | |
| CTTCGGTTCCTAACGGAAAA+GGG | - | chr3_2:68155174-68155193 | None:intergenic | 45.0% | |
| TCTTCGGTTCCTAACGGAAA+AGG | - | chr3_2:68155175-68155194 | None:intergenic | 45.0% | |
| GGGAGAGAAATATGATCGGA+AGG | - | chr3_2:68155322-68155341 | None:intergenic | 45.0% | |
| GAGGGGGAGAGAAATATGAT+CGG | - | chr3_2:68155326-68155345 | None:intergenic | 45.0% | |
| GAGATAGACAAAGAGAGAGG+GGG | - | chr3_2:68155342-68155361 | None:intergenic | 45.0% | |
| TCAGGATCCTCCATTGGAAA+TGG | - | chr3_2:68155795-68155814 | None:intergenic | 45.0% | |
| ATTTGTGTGAGACGCTGAGT+TGG | + | chr3_2:68155985-68156004 | Msa0419950:intron | 45.0% | |
| !! | TGGTTGGTCTCTTGAAACCT+TGG | + | chr3_2:68156201-68156220 | Msa0419950:intron | 45.0% |
| GCATGAAGAAGCAAACTCGA+AGG | + | chr3_2:68156437-68156456 | Msa0419950:intron | 45.0% | |
| !!! | TGGAAATGTGGGTGCTGTTT+TGG | + | chr3_2:68156548-68156567 | Msa0419950:CDS | 45.0% |
| TTTGTTGGGACCCACCTAAT+TGG | + | chr3_2:68156778-68156797 | Msa0419950:intron | 45.0% | |
| GTCACATGCCATCCAAACAT+CGG | + | chr3_2:68156865-68156884 | Msa0419950:intron | 45.0% | |
| GTCAAATTGTTAACTCCGGC+AGG | + | chr3_2:68157008-68157027 | Msa0419950:intron | 45.0% | |
| CTCTTAAGCAAGCAAGTCAG+GGG | + | chr3_2:68157127-68157146 | Msa0419950:intron | 45.0% | |
| GAACTAAGAGGGAATGGAGA+AGG | + | chr3_2:68157700-68157719 | Msa0419950:CDS | 45.0% | |
| TTGAGGTCAGTGGTTATGTC+AGG | - | chr3_2:68157784-68157803 | None:intergenic | 45.0% | |
| !!! | AACAGGTCTTTTGAGGTCAG+TGG | - | chr3_2:68157794-68157813 | None:intergenic | 45.0% |
| GACCTCAAAAGACCTGTTCT+TGG | + | chr3_2:68157796-68157815 | Msa0419950:CDS | 45.0% | |
| ! | CACCAAGAACAGGTCTTTTG+AGG | - | chr3_2:68157801-68157820 | None:intergenic | 45.0% |
| CTCAAAAGACCTGTTCTTGG+TGG | + | chr3_2:68157799-68157818 | Msa0419950:CDS | 45.0% | |
| !! | GGTCGAAAGCATTCTGATAC+AGG | + | chr3_2:68157859-68157878 | Msa0419950:CDS | 45.0% |
| CTTACTCTTGTATGGTTCCG+GGG | - | chr3_2:68158357-68158376 | None:intergenic | 45.0% | |
| TATGTGCCTCGGAATTGTAG+GGG | + | chr3_2:68158461-68158480 | Msa0419950:intron | 45.0% | |
| ATCTATCCCCTACAATTCCG+AGG | - | chr3_2:68158470-68158489 | None:intergenic | 45.0% | |
| GGAATTTGCCAGAGAGACTT+TGG | + | chr3_2:68158509-68158528 | Msa0419950:CDS | 45.0% | |
| GCATCCAATTGGTTAAGGCA+TGG | + | chr3_2:68158550-68158569 | Msa0419950:intron | 45.0% | |
| CTAGTGAGCTCAATAGCTAG+TGG | - | chr3_2:68159014-68159033 | None:intergenic | 45.0% | |
| CTCACTAGACCACCTATTGA+TGG | + | chr3_2:68159026-68159045 | Msa0419950:CDS | 45.0% | |
| ! | TAGACCACCTATTGATGGCA+AGG | + | chr3_2:68159031-68159050 | Msa0419950:CDS | 45.0% |
| CATTGTGCCTTGCCATCAAT+AGG | - | chr3_2:68159041-68159060 | None:intergenic | 45.0% | |
| ! | CTATTGATGGCAAGGCACAA+TGG | + | chr3_2:68159039-68159058 | Msa0419950:CDS | 45.0% |
| AAGCCTCCAAAGCCAGATAT+TGG | - | chr3_2:68159096-68159115 | None:intergenic | 45.0% | |
| GCCATTGGTGAGTACCAATT+AGG | + | chr3_2:68159165-68159184 | Msa0419950:intron | 45.0% | |
| TTTCGGACACAGACATGTGT+CGG | + | chr3_2:68159655-68159674 | Msa0419950:intron | 45.0% | |
| AGAAGACCGTCATTGGCAAA+AGG | - | chr3_2:68159829-68159848 | None:intergenic | 45.0% | |
| TGGACAGAGATTCGAACAGT+GGG | + | chr3_2:68159946-68159965 | Msa0419950:CDS | 45.0% | |
| CGGACAAATCTGAAGAACCA+TGG | + | chr3_2:68159974-68159993 | Msa0419950:CDS | 45.0% | |
| !!! | GTTTTGAGATTTGGCCACCA+TGG | - | chr3_2:68159994-68160013 | None:intergenic | 45.0% |
| AGATGCTGTCCAAGCTATAG+TGG | - | chr3_2:68160043-68160062 | None:intergenic | 45.0% | |
| TCCTTAGTAGGGTCTTCTGT+AGG | - | chr3_2:68160150-68160169 | None:intergenic | 45.0% | |
| !! | CCAAAAGTGTTTGCTCTGGT+TGG | - | chr3_2:68160194-68160213 | None:intergenic | 45.0% |
| ! | CCAACCAGAGCAAACACTTT+TGG | + | chr3_2:68160191-68160210 | Msa0419950:CDS | 45.0% |
| GTTGAATTCTCACCCCAAGA+TGG | - | chr3_2:68160318-68160337 | None:intergenic | 45.0% | |
| !! | TTAAAGCCATTTTCAGGGCC+TGG | + | chr3_2:68160462-68160481 | Msa0419950:CDS | 45.0% |
| !!! | TTTTTAATATTAAAAAAATG+TGG | - | chr3_2:68155906-68155925 | None:intergenic | 5.0% |
| TACGTGTCAGGATCCTCCAT+TGG | - | chr3_2:68155801-68155820 | None:intergenic | 50.0% | |
| GATCCTGACACGTACACCAT+CGG | + | chr3_2:68155807-68155826 | Msa0419950:intron | 50.0% | |
| ATCCTGACACGTACACCATC+GGG | + | chr3_2:68155808-68155827 | Msa0419950:intron | 50.0% | |
| ! | TAGGGGTCTTATAGGACCCA+TGG | + | chr3_2:68155842-68155861 | Msa0419950:intron | 50.0% |
| ! | GTCCTTGATGGTTTCCCTGA+TGG | + | chr3_2:68156612-68156631 | Msa0419950:CDS | 50.0% |
| TGGGACCCACCTAATTGGAT+AGG | + | chr3_2:68156783-68156802 | Msa0419950:intron | 50.0% | |
| AATTTGACGCAGTCACGCAC+CGG | - | chr3_2:68156996-68157015 | None:intergenic | 50.0% | |
| CAACACGAATCTAGACCTGC+CGG | - | chr3_2:68157026-68157045 | None:intergenic | 50.0% | |
| TTCGATTGCGGACATTCGGT+TGG | + | chr3_2:68157150-68157169 | Msa0419950:intron | 50.0% | |
| TCGATTGCGGACATTCGGTT+GGG | + | chr3_2:68157151-68157170 | Msa0419950:intron | 50.0% | |
| TCGTGAGTCACGACTCAACA+AGG | - | chr3_2:68157417-68157436 | None:intergenic | 50.0% | |
| TTGTTGAGTCGTGACTCACG+AGG | + | chr3_2:68157416-68157435 | Msa0419950:intron | 50.0% | |
| GACTCACGAGGAGAGTCTTA+CGG | + | chr3_2:68157428-68157447 | Msa0419950:intron | 50.0% | |
| GAGGAGAGTCTTACGGTACT+GGG | + | chr3_2:68157435-68157454 | Msa0419950:intron | 50.0% | |
| !! | TGTTTGGTGCCACCAAGAAC+AGG | - | chr3_2:68157811-68157830 | None:intergenic | 50.0% |
| CTTCTATGTTCCTCGTGACG+AGG | + | chr3_2:68158076-68158095 | Msa0419950:CDS | 50.0% | |
| TATCGTGCGCTTTGATACCC+CGG | + | chr3_2:68158337-68158356 | Msa0419950:CDS | 50.0% | |
| TTTGCCAGAGAGACTTTGGC+TGG | + | chr3_2:68158513-68158532 | Msa0419950:CDS | 50.0% | |
| TGTGCCTTGCCATCAATAGG+TGG | - | chr3_2:68159038-68159057 | None:intergenic | 50.0% | |
| CCTCCAAAGCCAGATATTGG+TGG | - | chr3_2:68159093-68159112 | None:intergenic | 50.0% | |
| !! | CCACCAATATCTGGCTTTGG+AGG | + | chr3_2:68159090-68159109 | Msa0419950:CDS | 50.0% |
| CTGATCAAGAGCTCCAAGCA+TGG | + | chr3_2:68159923-68159942 | Msa0419950:CDS | 50.0% | |
| ATCAAGAGCTCCAAGCATGG+TGG | + | chr3_2:68159926-68159945 | Msa0419950:CDS | 50.0% | |
| GAATCTCTGTCCACCATGCT+TGG | - | chr3_2:68159939-68159958 | None:intergenic | 50.0% | |
| GTGGACAGAGATTCGAACAG+TGG | + | chr3_2:68159945-68159964 | Msa0419950:CDS | 50.0% | |
| GATTCGAACAGTGGGACATG+CGG | + | chr3_2:68159954-68159973 | Msa0419950:CDS | 50.0% | |
| GCCTACAGAAGACCCTACTA+AGG | + | chr3_2:68160146-68160165 | Msa0419950:CDS | 50.0% | |
| ! | ACTCCTTTTCCAGTGACTCC+AGG | - | chr3_2:68160483-68160502 | None:intergenic | 50.0% |
| TTCCCGATGGTGTACGTGTC+AGG | - | chr3_2:68155813-68155832 | None:intergenic | 55.0% | |
| ! | TGTGTGAGACGCTGAGTTGG+AGG | + | chr3_2:68155988-68156007 | Msa0419950:intron | 55.0% |
| ! | GTGTGAGACGCTGAGTTGGA+GGG | + | chr3_2:68155989-68156008 | Msa0419950:intron | 55.0% |
| GGCCATCAGGGAAACCATCA+AGG | - | chr3_2:68156617-68156636 | None:intergenic | 55.0% | |
| TGATGGTTTCCCTGATGGCC+CGG | + | chr3_2:68156617-68156636 | Msa0419950:CDS | 55.0% | |
| CGGCAGGTCTAGATTCGTGT+TGG | + | chr3_2:68157024-68157043 | Msa0419950:intron | 55.0% | |
| GCAAGTCAGGGGTTCGATTG+CGG | + | chr3_2:68157138-68157157 | Msa0419950:intron | 55.0% | |
| GGGGTTCGATTGCGGACATT+CGG | + | chr3_2:68157146-68157165 | Msa0419950:intron | 55.0% | |
| GGACATTCGGTTGGGATGAG+AGG | + | chr3_2:68157159-68157178 | Msa0419950:intron | 55.0% | |
| CTAGGGAATGGGAGGAGATG+TGG | - | chr3_2:68157382-68157401 | None:intergenic | 55.0% | |
| AGTTGGGACTAGGGAATGGG+AGG | - | chr3_2:68157390-68157409 | None:intergenic | 55.0% | |
| CGAGGAGAGTCTTACGGTAC+TGG | + | chr3_2:68157434-68157453 | Msa0419950:intron | 55.0% | |
| ! | GTGCGACAGCGTCTAGGATA+TGG | - | chr3_2:68157838-68157857 | None:intergenic | 55.0% |
| TATCCTAGACGCTGTCGCAC+CGG | + | chr3_2:68157838-68157857 | Msa0419950:CDS | 55.0% | |
| TCAGCAAATGCCTCGTCACG+AGG | - | chr3_2:68158089-68158108 | None:intergenic | 55.0% | |
| GTGACTCCAGGCCCTGAAAA+TGG | - | chr3_2:68160471-68160490 | None:intergenic | 55.0% | |
| !! | TTTTCAGGGCCTGGAGTCAC+TGG | + | chr3_2:68160471-68160490 | Msa0419950:CDS | 55.0% |
| TAAGGTGGACCGGGCCATCA+GGG | - | chr3_2:68156629-68156648 | None:intergenic | 60.0% | |
| TTAAGGTGGACCGGGCCATC+AGG | - | chr3_2:68156630-68156649 | None:intergenic | 60.0% | |
| GGCACCAGCCAAAGTCTCTC+TGG | - | chr3_2:68158520-68158539 | None:intergenic | 60.0% | |
| GGGCCTGGAGTCACTGGAAA+AGG | + | chr3_2:68160477-68160496 | Msa0419950:CDS | 60.0% | |
| ! | CGCAGTCACGCACCGGTAGT+TGG | - | chr3_2:68156989-68157008 | None:intergenic | 65.0% |
| CGACCGGTGCGACAGCGTCT+AGG | - | chr3_2:68157844-68157863 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 68154441 | 68160703 | 68154441 | ID=Msa0419950;Name=Msa0419950 |
| chr3_2 | mRNA | 68154441 | 68160703 | 68154441 | ID=Msa0419950-mRNA-1;Parent=Msa0419950;Name=Msa0419950-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.5|0.55|1|1|1|9|179|767 |
| chr3_2 | exon | 68154441 | 68154546 | 68154441 | ID=Msa0419950-mRNA-1:exon:16002;Parent=Msa0419950-mRNA-1 |
| chr3_2 | exon | 68156445 | 68156638 | 68156445 | ID=Msa0419950-mRNA-1:exon:16003;Parent=Msa0419950-mRNA-1 |
| chr3_2 | exon | 68157640 | 68157880 | 68157640 | ID=Msa0419950-mRNA-1:exon:16004;Parent=Msa0419950-mRNA-1 |
| chr3_2 | exon | 68158045 | 68158371 | 68158045 | ID=Msa0419950-mRNA-1:exon:16005;Parent=Msa0419950-mRNA-1 |
| chr3_2 | exon | 68158481 | 68158560 | 68158481 | ID=Msa0419950-mRNA-1:exon:16006;Parent=Msa0419950-mRNA-1 |
| chr3_2 | exon | 68158671 | 68158781 | 68158671 | ID=Msa0419950-mRNA-1:exon:16007;Parent=Msa0419950-mRNA-1 |
| chr3_2 | exon | 68158870 | 68159171 | 68158870 | ID=Msa0419950-mRNA-1:exon:16008;Parent=Msa0419950-mRNA-1 |
| chr3_2 | exon | 68159254 | 68159436 | 68159254 | ID=Msa0419950-mRNA-1:exon:16009;Parent=Msa0419950-mRNA-1 |
| chr3_2 | exon | 68159765 | 68160703 | 68159765 | ID=Msa0419950-mRNA-1:exon:16010;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68154441 | 68154546 | 68154441 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68156445 | 68156638 | 68156445 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68157640 | 68157880 | 68157640 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68158045 | 68158371 | 68158045 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68158481 | 68158560 | 68158481 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68158671 | 68158781 | 68158671 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68158870 | 68159171 | 68158870 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68159254 | 68159436 | 68159254 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | CDS | 68159765 | 68160524 | 68159765 | ID=Msa0419950-mRNA-1:cds;Parent=Msa0419950-mRNA-1 |
| chr3_2 | three_prime_UTR | 68160525 | 68160703 | 68160525 | ID=Msa0419950-mRNA-1:three_prime_utr;Parent=Msa0419950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
