AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0466040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466040 MtrunA17_Chr3g0118641 92.802 903 34 3 9 881 1 902 0.0 1722
Msa0466040 MtrunA17_Chr3g0118651 72.907 908 206 9 9 881 1 903 0.0 1357
Msa0466040 MtrunA17_Chr3g0118621 76.102 862 161 6 64 881 5 865 0.0 1313
Msa0466040 MtrunA17_Chr4g0033171 60.057 706 246 7 208 881 24 725 0.0 882
Msa0466040 MtrunA17_Chr8g0344201 46.116 811 390 12 111 880 122 926 0.0 749
Msa0466040 MtrunA17_Chr8g0377101 45.261 844 407 15 86 881 80 916 0.0 728
Msa0466040 MtrunA17_Chr1g0205611 42.303 825 414 16 111 881 40 856 0.0 627
Msa0466040 MtrunA17_Chr1g0191921 43.023 774 397 10 146 881 91 858 0.0 618
Msa0466040 MtrunA17_Chr2g0329911 40.865 832 428 17 97 881 47 861 0.0 618
Msa0466040 MtrunA17_Chr4g0047281 39.258 889 461 18 41 880 36 894 0.0 616
Msa0466040 MtrunA17_Chr8g0342881 42.967 782 385 16 144 881 92 856 0.0 612
Msa0466040 MtrunA17_Chr8g0343031 39.709 826 435 15 102 881 57 865 0.0 602
Msa0466040 MtrunA17_Chr8g0343021 39.593 836 437 16 98 881 45 864 0.0 599
Msa0466040 MtrunA17_Chr8g0343011 40.799 826 427 16 100 881 58 865 0.0 599
Msa0466040 MtrunA17_Chr2g0329901 40.678 826 435 15 99 881 50 863 0.0 596
Msa0466040 MtrunA17_Chr8g0342921 39.886 880 463 20 54 881 4 869 0.0 596
Msa0466040 MtrunA17_Chr8g0342971 40.723 830 435 16 97 881 53 870 0.0 594
Msa0466040 MtrunA17_Chr7g0272791 40.705 823 433 15 107 881 52 867 0.0 593
Msa0466040 MtrunA17_Chr8g0344211 40.651 829 435 16 97 881 53 868 0.0 592
Msa0466040 MtrunA17_Chr8g0342891 40.000 865 457 16 68 881 8 861 0.0 585
Msa0466040 MtrunA17_Chr8g0342931 42.782 762 385 15 159 881 1 750 0.0 583
Msa0466040 MtrunA17_Chr5g0406871 38.017 847 456 16 86 881 39 867 0.0 578
Msa0466040 MtrunA17_Chr8g0342951 39.884 865 452 17 73 881 16 868 0.0 572
Msa0466040 MtrunA17_Chr8g0342901 38.596 855 450 17 68 881 8 828 0.0 569
Msa0466040 MtrunA17_Chr3g0120071 38.443 835 448 16 98 881 39 858 0.0 568
Msa0466040 MtrunA17_Chr8g0342981 40.604 761 381 16 163 881 92 823 3.05e-178 535
Msa0466040 MtrunA17_Chr8g0338451 37.302 756 422 14 149 864 107 850 1.31e-172 522
Msa0466040 MtrunA17_Chr8g0343001 39.868 755 380 11 156 881 98 807 5.55e-167 506
Msa0466040 MtrunA17_Chr8g0342991 39.446 758 379 12 156 881 98 807 6.11e-166 503
Msa0466040 MtrunA17_Chr8g0344241 41.058 397 202 4 515 881 67 461 3.48e-96 309
Msa0466040 MtrunA17_Chr6g0471951 35.081 496 248 10 376 836 18 474 3.72e-96 310
Msa0466040 MtrunA17_Chr4g0033181 48.980 147 65 3 86 223 75 220 9.96e-38 141
Msa0466040 MtrunA17_Chr7g0218231 53.782 119 27 1 559 649 14 132 1.83e-36 134
Msa0466040 MtrunA17_Chr6g0468081 44.944 89 21 1 589 649 1 89 5.12e-18 80.1
Msa0466040 MtrunA17_Chr4g0047271 48.315 89 45 1 791 878 1 89 2.65e-16 75.1
Msa0466040 MtrunA17_Chr5g0421231 73.469 49 7 1 298 346 45 87 6.37e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466040 AT3G45140.1 51.733 808 344 9 108 881 101 896 0.0 856
Msa0466040 AT3G45140.2 53.351 761 314 8 155 881 1 754 0.0 837
Msa0466040 AT1G72520.1 45.972 844 399 18 86 881 92 926 0.0 748
Msa0466040 AT1G17420.1 42.591 911 461 14 25 881 17 919 0.0 733
Msa0466040 AT1G67560.1 44.321 810 403 14 113 881 115 917 0.0 684
Msa0466040 AT1G55020.1 44.404 822 399 15 107 881 49 859 0.0 656
Msa0466040 AT3G22400.1 41.246 851 436 16 87 881 44 886 0.0 627

Find 175 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCATTCCAAAGTTCTTTA+AGG 0.084556 3_3:+66581709 Msa0466040:CDS
CTAGCAATTGTTGGTCTATT+AGG 0.092716 3_3:-66583536 None:intergenic
CATGTTCTTGTTCATGATTC+TGG 0.145766 3_3:+66582547 Msa0466040:CDS
CCAATGACGGTCTTCTAATA+TGG 0.163070 3_3:+66583255 Msa0466040:CDS
TTTGAGTTACCAGCAAATTT+TGG 0.176746 3_3:+66579154 Msa0466040:CDS
GAAATCTTCTCTAGGTAAAA+AGG 0.212403 3_3:+66576828 Msa0466040:CDS
AACTTACTCTTGTATGGTTC+CGG 0.228161 3_3:-66581770 None:intergenic
TTAACCAATTGGATGCTATA+TGG 0.237885 3_3:-66581957 None:intergenic
GTGGCCTTTGAAAAGTAAAT+TGG 0.239348 3_3:+66582097 Msa0466040:CDS
TATCAAAGCGCACGATATTT+TGG 0.241301 3_3:-66581745 None:intergenic
CTCACAACAATAGTACTAAT+TGG 0.244785 3_3:+66576800 Msa0466040:CDS
TGGAAATGTGGGTGCTGTTT+TGG 0.252907 3_3:+66579174 Msa0466040:CDS
TGGTAACAAACACTTAATTT+TGG 0.253312 3_3:+66577005 Msa0466040:CDS
TGTACCAAACTAGGTTTAAA+TGG 0.259190 3_3:-66583939 None:intergenic
CTGTGTGTTGCAATTATAAT+AGG 0.269350 3_3:-66582701 None:intergenic
ATGAAGAAAACTCTCTTTGT+AGG 0.284450 3_3:-66579310 None:intergenic
CCAACCAGAGCAAACACTTT+TGG 0.289754 3_3:+66583613 Msa0466040:CDS
TAGCAATTGTTGGTCTATTA+GGG 0.301680 3_3:-66583535 None:intergenic
GTGACTCCAGGCCCTGAAAA+TGG 0.302315 3_3:-66583890 None:intergenic
CTAAAGAATATAGTCCTTGA+TGG 0.311025 3_3:+66579226 Msa0466040:CDS
GAGTCATTGGATTCAAGATT+TGG 0.317623 3_3:-66581671 None:intergenic
ATTCTGATTCCACCAATATC+TGG 0.318341 3_3:+66582503 Msa0466040:CDS
TTTACACAATATGCTTATAT+AGG 0.319058 3_3:+66583506 Msa0466040:CDS
ATTCTGGTGGACCATAGATT+TGG 0.321973 3_3:-66582124 None:intergenic
ACCTCAAAAGACCTGTTCTT+GGG 0.332457 3_3:+66581214 Msa0466040:CDS
ATATCCATTTAAACCTAGTT+TGG 0.337278 3_3:+66583935 Msa0466040:exon
TTCACTCCATGTTGTGCATT+AGG 0.341211 3_3:-66583206 None:intergenic
AGTGATATACATTTATCATT+TGG 0.342964 3_3:+66584076 Msa0466040:three_prime_UTR
GTTCATTTGATAAAGAATAA+AGG 0.345576 3_3:+66584049 Msa0466040:three_prime_UTR
TCGAAGGGAGAGACAATAAA+AGG 0.356789 3_3:+66579079 Msa0466040:CDS
TCTCTAGTAATTGCTGATTC+TGG 0.358260 3_3:-66582140 None:intergenic
CTCATCAAGAATATTGTTAC+TGG 0.359156 3_3:+66576976 Msa0466040:CDS
CTCAGCTTTCTTAATCCACT+TGG 0.360020 3_3:-66581078 None:intergenic
ACTTACTCTTGTATGGTTCC+GGG 0.363410 3_3:-66581769 None:intergenic
TGTTTGAACTTACTCTTGTA+TGG 0.364028 3_3:-66581776 None:intergenic
TGTCCAATGTACTCTTCATC+TGG 0.364172 3_3:-66583704 None:intergenic
AATACTTCTGCCGTATCTTT+AGG 0.368151 3_3:+66581542 Msa0466040:CDS
TTGGAGAAAATTCGAGTCAT+TGG 0.368346 3_3:-66581684 None:intergenic
ATAGTCACTGATATAAATCT+TGG 0.370327 3_3:+66581596 Msa0466040:CDS
CCCACATTTCCAAAATTTGC+TGG 0.375304 3_3:-66579163 None:intergenic
ATTGAGGGAACAACACTATA+TGG 0.375357 3_3:+66582367 Msa0466040:CDS
TTAGCATCCTTAAAGAACTT+TGG 0.376602 3_3:-66581716 None:intergenic
GTGCGACATCGTCTAGGATA+TGG 0.376901 3_3:-66581252 None:intergenic
TCAATATTCCTTCACTAGTA+AGG 0.377393 3_3:-66582408 None:intergenic
AATATTGTTACTGGTATTGT+TGG 0.378392 3_3:+66576985 Msa0466040:CDS
GACCTCAAAAGACCTGTTCT+TGG 0.381282 3_3:+66581213 Msa0466040:CDS
TCTATGTGCTAGATTTGTAT+TGG 0.384673 3_3:+66583994 Msa0466040:three_prime_UTR
TCGAAAAGAATGATATTTCA+AGG 0.387741 3_3:-66582832 None:intergenic
GGGTGAGAATTCAACTATAA+AGG 0.389284 3_3:+66583745 Msa0466040:CDS
ATATTGGTGGAATCAGAATT+AGG 0.390188 3_3:-66582499 None:intergenic
GAATCCATGATTGACAATTA+AGG 0.395271 3_3:-66579270 None:intergenic
GTACTCCTTTCTTCATATAG+TGG 0.399010 3_3:-66581461 None:intergenic
CATTGTGCCTTGCCATCAAT+AGG 0.401726 3_3:-66582460 None:intergenic
GGTCGAAAGCATTCTGATAC+AGG 0.402041 3_3:+66581276 Msa0466040:CDS
CCACCAATATCTGGCTTTGG+AGG 0.402930 3_3:+66582512 Msa0466040:CDS
CACCAAGATATAATATCATA+TGG 0.404421 3_3:-66576678 None:intergenic
AAGCCTCCAAAGCCAGATAT+TGG 0.404646 3_3:-66582515 None:intergenic
TCCACCTTAATTGTCAATCA+TGG 0.405732 3_3:+66579266 Msa0466040:CDS
TTAAGGTGGACAGGGCCATC+AGG 0.407562 3_3:-66579253 None:intergenic
TAACCAATTGGATGCTATAT+GGG 0.408073 3_3:-66581956 None:intergenic
ATTCCACCAATATCTGGCTT+TGG 0.411670 3_3:+66582509 Msa0466040:CDS
AAATTGGATGCCCAAATCTA+TGG 0.413135 3_3:+66582113 Msa0466040:CDS
CCATATTAGAAGACCGTCAT+TGG 0.419135 3_3:-66583255 None:intergenic
CATTCCAAAAGTGTTTGCTC+TGG 0.419934 3_3:-66583617 None:intergenic
TTCTGGTGGACCATAGATTT+GGG 0.421786 3_3:-66582123 None:intergenic
TCTAGGATATGGATATTGTT+TGG 0.425065 3_3:-66581241 None:intergenic
TATGATGTCTATAATGATCT+TGG 0.425109 3_3:+66581171 Msa0466040:CDS
GTTTAAATGGATATGCTGTA+TGG 0.426545 3_3:-66583926 None:intergenic
GTCCTTGATGGTTTCCCTGA+TGG 0.427910 3_3:+66579238 Msa0466040:CDS
TTGTAGGGGATAGATTCTTT+TGG 0.428079 3_3:+66581889 Msa0466040:intron
CTCACTAGACCACCTATTGA+TGG 0.432807 3_3:+66582448 Msa0466040:CDS
CCAAAAGTGTTTGCTCTGGT+TGG 0.436594 3_3:-66583613 None:intergenic
TTTGTAGGAGTATCATGCTT+AGG 0.439282 3_3:-66579295 None:intergenic
TTTCCCATTCTTCCTTAGTA+GGG 0.440122 3_3:-66583580 None:intergenic
TTGAGGTCAGCGGTTATGTC+AGG 0.448323 3_3:-66581198 None:intergenic
AAGACCCTACTAAGGAAGAA+TGG 0.454559 3_3:+66583576 Msa0466040:CDS
TCTCTCAGTTTGCTAACATA+TGG 0.455221 3_3:-66582343 None:intergenic
ATATCATATGGTTGGTTGGT+TGG 0.455481 3_3:-66576666 None:intergenic
ATGGGATGCAATTAAACAAT+GGG 0.457493 3_3:+66583274 Msa0466040:CDS
GGGCCTGGAGTCACTGGAAA+AGG 0.458638 3_3:+66583899 Msa0466040:CDS
ATAGAAGCAATTTACAAAGA+AGG 0.458987 3_3:+66581638 Msa0466040:CDS
ATGAACAAGAACATGAGCTT+TGG 0.461543 3_3:-66582539 None:intergenic
TAGACTCAAGGAATGAAGAT+AGG 0.461905 3_3:+66583816 Msa0466040:CDS
TATAATATCATATGGTTGGT+TGG 0.462538 3_3:-66576670 None:intergenic
AATGGCTTTAATGACTCATA+AGG 0.463312 3_3:-66583872 None:intergenic
AACCATATGATATTATATCT+TGG 0.463626 3_3:+66576676 Msa0466040:exon
GAATCTCTGTCCACCATGCT+TGG 0.465030 3_3:-66583358 None:intergenic
GGCACCAGCCAAAGTCTCTC+TGG 0.472557 3_3:-66581931 None:intergenic
TTTCTCCGTCCTATAATTGG+AGG 0.476414 3_3:+66576767 Msa0466040:CDS
CAATGACGGTCTTCTAATAT+GGG 0.476498 3_3:+66583256 Msa0466040:CDS
CTAATAGAACTAAGAGGGAA+TGG 0.477908 3_3:+66581111 Msa0466040:CDS
GATGAGCTAATAGAACTAAG+AGG 0.478619 3_3:+66581105 Msa0466040:CDS
TCCTTAGTAGGGTCTTCTGT+AGG 0.479472 3_3:-66583569 None:intergenic
AGACCCTACTAAGGAAGAAT+GGG 0.480218 3_3:+66583577 Msa0466040:CDS
TTTGCCAGAGAGACTTTGGC+TGG 0.481032 3_3:+66581927 Msa0466040:CDS
ACTCTTGCATGTACCAAACT+AGG 0.483070 3_3:-66583948 None:intergenic
ATAAGAGTAGTGATGGCAAA+AGG 0.486600 3_3:+66576880 Msa0466040:CDS
GATTGACAATTAAGGTGGAC+AGG 0.489484 3_3:-66579262 None:intergenic
TAGTCACTGATATAAATCTT+GGG 0.491052 3_3:+66581597 Msa0466040:CDS
GGAATTTGCCAGAGAGACTT+TGG 0.496070 3_3:+66581923 Msa0466040:CDS
TAGCAAACTGAGAGAGATTG+AGG 0.496616 3_3:+66582351 Msa0466040:CDS
ATGAATGATTGATGTACATA+TGG 0.501544 3_3:-66576727 None:intergenic
CTAGTAATTGCTGATTCTGG+TGG 0.502077 3_3:-66582137 None:intergenic
GATTCAAGAATGTCTGAGCT+TGG 0.509066 3_3:-66583323 None:intergenic
TTGAAGAATAGACATGGAGC+TGG 0.509740 3_3:+66583842 Msa0466040:CDS
CAACCCATATAGCATCCAAT+TGG 0.511275 3_3:+66581953 Msa0466040:CDS
TACTCCTTTCTTCATATAGT+GGG 0.517291 3_3:-66581460 None:intergenic
AAGATATAATATCATATGGT+TGG 0.517456 3_3:-66576674 None:intergenic
AGAAGACCGTCATTGGCAAA+AGG 0.518247 3_3:-66583248 None:intergenic
AGATGCTGTCCAAGCTATAG+TGG 0.518404 3_3:-66583462 None:intergenic
AATGTTGCTTGAATTTGTGA+TGG 0.521479 3_3:-66583644 None:intergenic
CGACCGGTGCGACATCGTCT+AGG 0.522040 3_3:-66581258 None:intergenic
AGGAGATTGAATGAAATTGA+AGG 0.525552 3_3:+66583788 Msa0466040:CDS
CCTCAAAAGACCTGTTCTTG+GGG 0.526691 3_3:+66581215 Msa0466040:CDS
ACATCATTACCACTATAGCT+TGG 0.532589 3_3:+66583453 Msa0466040:CDS
GAACTAAGAGGGAATGGAGA+AGG 0.533603 3_3:+66581117 Msa0466040:CDS
CAGACCCACTATATGAAGAA+AGG 0.535341 3_3:+66581456 Msa0466040:intron
TGGTTCTTGAAATCTTCTCT+AGG 0.535689 3_3:+66576820 Msa0466040:CDS
AACTTATAGCACAGTTGAAG+AGG 0.540223 3_3:+66582184 Msa0466040:CDS
TTTAAATGGATATGCTGTAT+GGG 0.542203 3_3:-66583925 None:intergenic
GCCTACAGAAGACCCTACTA+AGG 0.543977 3_3:+66583568 Msa0466040:CDS
CAATTGGATGCTATATGGGT+TGG 0.548678 3_3:-66581952 None:intergenic
TGTAGTCAAGCCTAAAGATA+CGG 0.551843 3_3:-66581552 None:intergenic
CGCAACTTTATTGATCTCCA+TGG 0.555615 3_3:-66582780 None:intergenic
AATCCACTTGGTGTTTGTGA+TGG 0.558499 3_3:-66581066 None:intergenic
GGCCATCAGGGAAACCATCA+AGG 0.563223 3_3:-66579240 None:intergenic
ATCATAATCATAGATTCTGT+CGG 0.564842 3_3:-66581154 None:intergenic
TATGGGATGCAATTAAACAA+TGG 0.570977 3_3:+66583273 Msa0466040:CDS
CCTCCAAAGCCAGATATTGG+TGG 0.572821 3_3:-66582512 None:intergenic
TTGAAGGTATTATAGACTCA+AGG 0.576809 3_3:+66583804 Msa0466040:CDS
TAAGGTGGACAGGGCCATCA+GGG 0.582528 3_3:-66579252 None:intergenic
ATGAGCTAATAGAACTAAGA+GGG 0.582546 3_3:+66581106 Msa0466040:CDS
TAGTTGTATAAGAGTAGTGA+TGG 0.586287 3_3:+66576873 Msa0466040:CDS
CTTACTCTTGTATGGTTCCG+GGG 0.587013 3_3:-66581768 None:intergenic
GTTGAATTCTCACCCCAAGA+TGG 0.587735 3_3:-66583737 None:intergenic
CATATGATATTATATCTTGG+TGG 0.587795 3_3:+66576679 Msa0466040:exon
AGCAAACTGAGAGAGATTGA+GGG 0.591240 3_3:+66582352 Msa0466040:CDS
GAAGTTCTCATTAATGCAAG+TGG 0.591680 3_3:+66582806 Msa0466040:CDS
ATCTAGCACATAGAAAATGT+AGG 0.594196 3_3:-66583985 None:intergenic
ATCATGAGCTAATAAGCCAT+TGG 0.594756 3_3:+66582572 Msa0466040:CDS
TGTATCAGAATGCTTTCGAC+CGG 0.595298 3_3:-66581274 None:intergenic
AAGGTTTGCATAAGAAGGGG+TGG 0.596610 3_3:+66576847 Msa0466040:CDS
TAGACCACCTATTGATGGCA+AGG 0.603643 3_3:+66582453 Msa0466040:CDS
TTGCCATCACAAACACCAAG+TGG 0.605543 3_3:+66581063 Msa0466040:CDS
TGTGCCTTGCCATCAATAGG+TGG 0.607674 3_3:-66582457 None:intergenic
CATCCTTTGAAAAGTTACAA+AGG 0.609574 3_3:+66583768 Msa0466040:CDS
GCATGAAGAAGCAAACTCGA+AGG 0.610739 3_3:+66579063 Msa0466040:intron
TATCCTAGACGATGTCGCAC+CGG 0.610834 3_3:+66581255 Msa0466040:CDS
TCAGCAAATGCCTCGTCACG+AGG 0.615936 3_3:-66581500 None:intergenic
CTTCTATGTTCCTCGTGACG+AGG 0.615973 3_3:+66581490 Msa0466040:CDS
TCCATGGTATATCTCAGATG+TGG 0.618261 3_3:-66582764 None:intergenic
CTAGTGAGCTCAATAGCTAG+TGG 0.619729 3_3:-66582433 None:intergenic
TCACCAGATGAAGAGTACAT+TGG 0.620155 3_3:+66583701 Msa0466040:CDS
CATGAAGAAGCAAACTCGAA+GGG 0.623114 3_3:+66579064 Msa0466040:intron
TCCATGATTGACAATTAAGG+TGG 0.624709 3_3:-66579267 None:intergenic
TATCGTGCGCTTTGATACCC+CGG 0.626726 3_3:+66581751 Msa0466040:CDS
GCTAAGAACTCATTGTGTTG+TGG 0.627066 3_3:+66582676 Msa0466040:CDS
CTGATCAAGAGCTCCAAGCA+TGG 0.628834 3_3:+66583345 Msa0466040:CDS
TGGACAGAGATTCGAACAGT+GGG 0.633544 3_3:+66583368 Msa0466040:CDS
AGGAATTTGAAGAATAGACA+TGG 0.634907 3_3:+66583836 Msa0466040:CDS
CAGTAACAATATTCTTGATG+AGG 0.640270 3_3:-66576975 None:intergenic
CTATTGATGGCAAGGCACAA+TGG 0.641673 3_3:+66582461 Msa0466040:CDS
AAGTTCTCATTAATGCAAGT+GGG 0.643884 3_3:+66582807 Msa0466040:CDS
AAAAGCTTTAGTGAGTGTGA+AGG 0.645031 3_3:+66576939 Msa0466040:CDS
ATTGACAATTAAGGTGGACA+GGG 0.652090 3_3:-66579261 None:intergenic
CGGACAAATCTGAAGAACCA+TGG 0.653620 3_3:+66583396 Msa0466040:CDS
TCCACATCTGAGATATACCA+TGG 0.656207 3_3:+66582763 Msa0466040:CDS
CTCAAAAGACCTGTTCTTGG+GGG 0.662000 3_3:+66581216 Msa0466040:CDS
GAAGATCCTAATGCACAACA+TGG 0.666470 3_3:+66583200 Msa0466040:CDS
ATCAAGAGCTCCAAGCATGG+TGG 0.666595 3_3:+66583348 Msa0466040:CDS
GATTCGAACAGTGGGACATG+CGG 0.669148 3_3:+66583376 Msa0466040:CDS
GTGGACAGAGATTCGAACAG+TGG 0.669638 3_3:+66583367 Msa0466040:CDS
GTGAGTGTGAAGGAAAGTGA+TGG 0.706550 3_3:+66576949 Msa0466040:CDS
AGTGTGAAGGAAAGTGATGG+TGG 0.718611 3_3:+66576952 Msa0466040:CDS
ACAAATCTGAAGAACCATGG+TGG 0.731842 3_3:+66583399 Msa0466040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTATTTTATATAA+TGG - chr3_3:66580719-66580738 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTTTTT+TGG + chr3_3:66582059-66582078 Msa0466040:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTTT+GGG + chr3_3:66582059-66582078 Msa0466040:intron 0.0%
!!! AAAATAGATTATTTTTCTTT+GGG + chr3_3:66577938-66577957 Msa0466040:intron 10.0%
!!! TTTTTAATATTAAAAAAGTG+TGG - chr3_3:66578532-66578551 None:intergenic 10.0%
!! ATAAATTAAAAAATGAATAC+TGG - chr3_3:66580613-66580632 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577651-66577670 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577651-66577670 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577651-66577670 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577651-66577670 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577651-66577670 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577651-66577670 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577651-66577670 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577651-66577670 None:intergenic 100.0%
!! ATATAATTTAAGAGTTCAAA+TGG + chr3_3:66577220-66577239 Msa0466040:intron 15.0%
!! TATAATTTAAGAGTTCAAAT+GGG + chr3_3:66577221-66577240 Msa0466040:intron 15.0%
!! AAAAATATCATTAACAAAAG+TGG + chr3_3:66577321-66577340 Msa0466040:intron 15.0%
!!! AATTGGTGTAAAATTTTTTA+GGG - chr3_3:66577581-66577600 None:intergenic 15.0%
!!! AAATTGGTGTAAAATTTTTT+AGG - chr3_3:66577582-66577601 None:intergenic 15.0%
!! AATCAATAGATAAATATACT+TGG - chr3_3:66577825-66577844 None:intergenic 15.0%
!! ATCTATATGATGATAAAAAA+TGG + chr3_3:66577846-66577865 Msa0466040:intron 15.0%
!! TATAATAGATAGATACTTTA+TGG - chr3_3:66577875-66577894 None:intergenic 15.0%
!!! CAAAATAGATTATTTTTCTT+TGG + chr3_3:66577937-66577956 Msa0466040:intron 15.0%
!!! AAATAGATTATTTTTCTTTG+GGG + chr3_3:66577939-66577958 Msa0466040:intron 15.0%
!!! TCTTTTATAAAAAGAAAAAG+GGG - chr3_3:66578235-66578254 None:intergenic 15.0%
!!! GTCTTTTATAAAAAGAAAAA+GGG - chr3_3:66578236-66578255 None:intergenic 15.0%
!!! TGTCTTTTATAAAAAGAAAA+AGG - chr3_3:66578237-66578256 None:intergenic 15.0%
!! TTTACTAATAAGAAATTCAT+GGG - chr3_3:66579736-66579755 None:intergenic 15.0%
!! AAATTTGTAATATTGTTTCA+TGG + chr3_3:66580516-66580535 Msa0466040:intron 15.0%
!! AATTTGTAATATTGTTTCAT+GGG + chr3_3:66580517-66580536 Msa0466040:intron 15.0%
!! AATAACATACAAATTAAATC+AGG - chr3_3:66581016-66581035 None:intergenic 15.0%
!!! TTGCATATATTTTTCTTAAT+TGG + chr3_3:66581377-66581396 Msa0466040:intron 15.0%
!! TATATATAAGTTATTGTGAA+AGG - chr3_3:66582020-66582039 None:intergenic 15.0%
!! AAGATATAATATCATATGGT+TGG - chr3_3:66576677-66576696 None:intergenic 20.0%
!! AACCATATGATATTATATCT+TGG + chr3_3:66576676-66576695 Msa0466040:exon 20.0%
!!! AATATTTTTCCTCCAATTAT+AGG - chr3_3:66576779-66576798 None:intergenic 20.0%
!! ATTAATCTCATAAACTTACT+TGG - chr3_3:66577054-66577073 None:intergenic 20.0%
!!! GAATAATTATGATTTGTGAA+CGG - chr3_3:66577109-66577128 None:intergenic 20.0%
!!! ATTATTTGAGTTCAATTGTT+TGG - chr3_3:66577358-66577377 None:intergenic 20.0%
!!! TAATTTAAAATTTGGTTGTG+AGG - chr3_3:66577461-66577480 None:intergenic 20.0%
!!! GGTCATAGTAATTTAAAATT+TGG - chr3_3:66577469-66577488 None:intergenic 20.0%
!! ATTTAACGCAAAAAAAAATG+TGG + chr3_3:66577509-66577528 Msa0466040:intron 20.0%
!! GAGAATAAAACATGTTAAAT+TGG - chr3_3:66577598-66577617 None:intergenic 20.0%
!! TTAACGTGTATAATAACATT+GGG + chr3_3:66577714-66577733 Msa0466040:intron 20.0%
!!! TATACTTGGCATTTAATTTA+TGG - chr3_3:66577811-66577830 None:intergenic 20.0%
!! TATAAAAGACAAAACAACAA+CGG + chr3_3:66578246-66578265 Msa0466040:intron 20.0%
!! GAATGCATATAAATTAATTG+TGG - chr3_3:66578992-66579011 None:intergenic 20.0%
!! AGAAAAATGTGAATAGAAAT+TGG + chr3_3:66579454-66579473 Msa0466040:intron 20.0%
!! GTTTACTAATAAGAAATTCA+TGG - chr3_3:66579737-66579756 None:intergenic 20.0%
!! TTTAATCTATGATGACAAAT+TGG + chr3_3:66580397-66580416 Msa0466040:intron 20.0%
!! AAATTTCCAAATTTATGAGA+TGG - chr3_3:66580502-66580521 None:intergenic 20.0%
!! TTTCTTAATTGGTATAATTG+TGG + chr3_3:66581388-66581407 Msa0466040:intron 20.0%
!! TTTGTTAAATTCAATACTAC+AGG + chr3_3:66582270-66582289 Msa0466040:intron 20.0%
!!! AATAAGTTAGTTCTAGTTAT+AGG - chr3_3:66582635-66582654 None:intergenic 20.0%
!!! GTAATTGTTATTTTTCTAAG+AGG + chr3_3:66583167-66583186 Msa0466040:intron 20.0%
!! TTTACACAATATGCTTATAT+AGG + chr3_3:66583506-66583525 Msa0466040:CDS 20.0%
!! GTTCATTTGATAAAGAATAA+AGG + chr3_3:66584049-66584068 Msa0466040:three_prime_UTR 20.0%
!! AGTGATATACATTTATCATT+TGG + chr3_3:66584076-66584095 Msa0466040:three_prime_UTR 20.0%
! TATAATATCATATGGTTGGT+TGG - chr3_3:66576673-66576692 None:intergenic 25.0%
! CACCAAGATATAATATCATA+TGG - chr3_3:66576681-66576700 None:intergenic 25.0%
! CATATGATATTATATCTTGG+TGG + chr3_3:66576679-66576698 Msa0466040:exon 25.0%
! ATGAATGATTGATGTACATA+TGG - chr3_3:66576730-66576749 None:intergenic 25.0%
! TAAAAAGGTTTGCATAAGAA+GGG + chr3_3:66576843-66576862 Msa0466040:CDS 25.0%
! AATATTGTTACTGGTATTGT+TGG + chr3_3:66576985-66577004 Msa0466040:CDS 25.0%
!! TGGTAACAAACACTTAATTT+TGG + chr3_3:66577005-66577024 Msa0466040:CDS 25.0%
! AGAATCCAAATTCGATTATT+AGG + chr3_3:66577410-66577429 Msa0466040:intron 25.0%
! TTCTACCTAATAATCGAATT+TGG - chr3_3:66577418-66577437 None:intergenic 25.0%
! CTTAACGTGTATAATAACAT+TGG + chr3_3:66577713-66577732 Msa0466040:intron 25.0%
! TTTGCAATTTCTCTTCATTT+AGG + chr3_3:66578161-66578180 Msa0466040:intron 25.0%
! TTGCAATTTCTCTTCATTTA+GGG + chr3_3:66578162-66578181 Msa0466040:intron 25.0%
!! ATAAAATTTAGGGGTCTTAT+AGG + chr3_3:66578460-66578479 Msa0466040:intron 25.0%
! CTCACACAAATTTCTTAAAT+GGG - chr3_3:66578602-66578621 None:intergenic 25.0%
! TCTCACACAAATTTCTTAAA+TGG - chr3_3:66578603-66578622 None:intergenic 25.0%
! GAATCATTTGTCAACATTTA+AGG + chr3_3:66578752-66578771 Msa0466040:intron 25.0%
! AGAGCTAAATTTCTTTAGTT+TGG + chr3_3:66578778-66578797 Msa0466040:intron 25.0%
! CAACAAATATTATGAGACAT+TGG + chr3_3:66578946-66578965 Msa0466040:intron 25.0%
! CATATAAATCCTATCCAATT+AGG - chr3_3:66579421-66579440 None:intergenic 25.0%
! ATGTGAATAGAAATTGGATT+TGG + chr3_3:66579460-66579479 Msa0466040:intron 25.0%
! TTGTTATCACACTTGATATA+TGG + chr3_3:66580176-66580195 Msa0466040:intron 25.0%
! CAAATTTATGAGATGGTTTA+AGG - chr3_3:66580495-66580514 None:intergenic 25.0%
! CTTAAACCATCTCATAAATT+TGG + chr3_3:66580493-66580512 Msa0466040:intron 25.0%
!! ATAGATATTAATACCCCTTT+TGG + chr3_3:66580771-66580790 Msa0466040:intron 25.0%
! GAATGTGAATTGATTATGTT+TGG - chr3_3:66580875-66580894 None:intergenic 25.0%
!!! TGTATGTTATTTTTCATGCA+TGG + chr3_3:66581025-66581044 Msa0466040:intron 25.0%
! ATCATAATCATAGATTCTGT+CGG - chr3_3:66581157-66581176 None:intergenic 25.0%
! TATGATGTCTATAATGATCT+TGG + chr3_3:66581171-66581190 Msa0466040:CDS 25.0%
! ATAGAAGCAATTTACAAAGA+AGG + chr3_3:66581638-66581657 Msa0466040:CDS 25.0%
! TAAACTTAACTGTCATGAAA+TGG + chr3_3:66581821-66581840 Msa0466040:intron 25.0%
!! ATGAAATGGAAATTCTTTTC+TGG + chr3_3:66581835-66581854 Msa0466040:intron 25.0%
!!! TTTTTTTGGGTTCATTTGAT+AGG + chr3_3:66582073-66582092 Msa0466040:intron 25.0%
! AACATCTTATACAACCTAAT+TGG - chr3_3:66582604-66582623 None:intergenic 25.0%
! TATATGTTAATTGTGTTTGC+AGG + chr3_3:66582654-66582673 Msa0466040:intron 25.0%
! TAATCTAAAAATTGGATGCA+TGG - chr3_3:66582738-66582757 None:intergenic 25.0%
! GGATGCAATAATCTAAAAAT+TGG - chr3_3:66582746-66582765 None:intergenic 25.0%
! TCGAAAAGAATGATATTTCA+AGG - chr3_3:66582835-66582854 None:intergenic 25.0%
!! CTTTTCGAATAAGTATACAA+TGG + chr3_3:66582847-66582866 Msa0466040:intron 25.0%
! TTCCAAATGATCTTATCAAT+AGG + chr3_3:66582921-66582940 Msa0466040:intron 25.0%
! TACCTATTGATAAGATCATT+TGG - chr3_3:66582926-66582945 None:intergenic 25.0%
! AATTGAATGTAAACATGTCT+TGG + chr3_3:66583054-66583073 Msa0466040:intron 25.0%
! ACGTAAGTTAATATTCAATG+TGG - chr3_3:66583149-66583168 None:intergenic 25.0%
!!! TGTTATTTTTCTAAGAGGAA+TGG + chr3_3:66583172-66583191 Msa0466040:intron 25.0%
!!! TCATTTTGTGTTTTGAGATT+TGG - chr3_3:66583425-66583444 None:intergenic 25.0%
!!! ATTTTCTTTCTAGCAATTGT+TGG - chr3_3:66583548-66583567 None:intergenic 25.0%
! TTTAAATGGATATGCTGTAT+GGG - chr3_3:66583928-66583947 None:intergenic 25.0%
! ATATCCATTTAAACCTAGTT+TGG + chr3_3:66583935-66583954 Msa0466040:exon 25.0%
! TATTTTCTCCGTCCTATAAT+TGG + chr3_3:66576764-66576783 Msa0466040:CDS 30.0%
! TTTTTCCTCCAATTATAGGA+CGG - chr3_3:66576775-66576794 None:intergenic 30.0%
CTCACAACAATAGTACTAAT+TGG + chr3_3:66576800-66576819 Msa0466040:CDS 30.0%
GAAATCTTCTCTAGGTAAAA+AGG + chr3_3:66576828-66576847 Msa0466040:CDS 30.0%
GTAAAAAGGTTTGCATAAGA+AGG + chr3_3:66576842-66576861 Msa0466040:CDS 30.0%
AAAAAGGTTTGCATAAGAAG+GGG + chr3_3:66576844-66576863 Msa0466040:CDS 30.0%
TAGTTGTATAAGAGTAGTGA+TGG + chr3_3:66576873-66576892 Msa0466040:CDS 30.0%
CAGTAACAATATTCTTGATG+AGG - chr3_3:66576978-66576997 None:intergenic 30.0%
CTCATCAAGAATATTGTTAC+TGG + chr3_3:66576976-66576995 Msa0466040:CDS 30.0%
CGTTAAATTTCGTTTCCTAA+CGG - chr3_3:66577497-66577516 None:intergenic 30.0%
TTGCAATTTATCTGCATTCA+GGG - chr3_3:66578012-66578031 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG - chr3_3:66578013-66578032 None:intergenic 30.0%
ACTAACAAAGTCTACATTCA+GGG - chr3_3:66578041-66578060 None:intergenic 30.0%
ACTTCCGTCAACAAAAAAAA+AGG + chr3_3:66578277-66578296 Msa0466040:intron 30.0%
!!! TGAGCCTTTTTTTTTGTTGA+CGG - chr3_3:66578284-66578303 None:intergenic 30.0%
AAAAAAAAGGCTCACAAAAG+TGG + chr3_3:66578290-66578309 Msa0466040:intron 30.0%
ATGGTCTAACTAAGATCATT+TGG - chr3_3:66578402-66578421 None:intergenic 30.0%
CATCGGGAAGATAAAATTTA+GGG + chr3_3:66578450-66578469 Msa0466040:intron 30.0%
ATCGGGAAGATAAAATTTAG+GGG + chr3_3:66578451-66578470 Msa0466040:intron 30.0%
TAACTCTTAAGTAAGACCAT+GGG - chr3_3:66578487-66578506 None:intergenic 30.0%
TTAACTCTTAAGTAAGACCA+TGG - chr3_3:66578488-66578507 None:intergenic 30.0%
TGACAAATGATTCATGACAA+TGG - chr3_3:66578745-66578764 None:intergenic 30.0%
TACCAAAATGTGAACTCATT+TGG + chr3_3:66578810-66578829 Msa0466040:intron 30.0%
! AACCAAATGAGTTCACATTT+TGG - chr3_3:66578815-66578834 None:intergenic 30.0%
TAGTCGATCAAAATTAGTAG+CGG - chr3_3:66578883-66578902 None:intergenic 30.0%
TTTGCTTCTTCATGCAAATA+AGG - chr3_3:66579058-66579077 None:intergenic 30.0%
AACAGAGAAAAAAGAGAAAG+AGG + chr3_3:66579114-66579133 Msa0466040:CDS 30.0%
!! TTTGAGTTACCAGCAAATTT+TGG + chr3_3:66579154-66579173 Msa0466040:CDS 30.0%
CTAAAGAATATAGTCCTTGA+TGG + chr3_3:66579226-66579245 Msa0466040:CDS 30.0%
GAATCCATGATTGACAATTA+AGG - chr3_3:66579273-66579292 None:intergenic 30.0%
ATGAAGAAAACTCTCTTTGT+AGG - chr3_3:66579313-66579332 None:intergenic 30.0%
! GAGAGTTTTCTTCATTAACA+AGG + chr3_3:66579318-66579337 Msa0466040:CDS 30.0%
GGTAACGATGTTAATACATT+AGG + chr3_3:66579339-66579358 Msa0466040:intron 30.0%
TAAATCCTATCCAATTAGGT+GGG - chr3_3:66579417-66579436 None:intergenic 30.0%
ATAAATCCTATCCAATTAGG+TGG - chr3_3:66579418-66579437 None:intergenic 30.0%
TGAATAGAAATTGGATTTGG+TGG + chr3_3:66579463-66579482 Msa0466040:intron 30.0%
ACCTATTGAACATACAAGAT+GGG - chr3_3:66579832-66579851 None:intergenic 30.0%
AACCTATTGAACATACAAGA+TGG - chr3_3:66579833-66579852 None:intergenic 30.0%
!!! AGATTTTTTACCGCTAAACA+AGG + chr3_3:66579861-66579880 Msa0466040:intron 30.0%
! TTTTTGGATTACCACGATAT+AGG - chr3_3:66579900-66579919 None:intergenic 30.0%
!!! CAATGGCTTGATAGTTTTTT+TGG - chr3_3:66579916-66579935 None:intergenic 30.0%
! ATCAACTAGTCTATCAACAA+TGG - chr3_3:66579933-66579952 None:intergenic 30.0%
TCTTGTGTGTTTCAAATGTT+GGG - chr3_3:66579984-66580003 None:intergenic 30.0%
TTCTTGTGTGTTTCAAATGT+TGG - chr3_3:66579985-66580004 None:intergenic 30.0%
!!! AAAGTTTTGAGCAAACTCAA+AGG - chr3_3:66580120-66580139 None:intergenic 30.0%
! TGAGTTTGCTCAAAACTTTA+AGG + chr3_3:66580121-66580140 Msa0466040:intron 30.0%
!! ACTTTAAGGCATTTGACATA+TGG + chr3_3:66580135-66580154 Msa0466040:intron 30.0%
! CGCAATTTCAACATTTTCTT+AGG + chr3_3:66580263-66580282 Msa0466040:intron 30.0%
! TCAACATTTTCTTAGGTGTT+TGG + chr3_3:66580270-66580289 Msa0466040:intron 30.0%
! ACTGGAAAATGAATCTTTTG+CGG + chr3_3:66580353-66580372 Msa0466040:intron 30.0%
GTAATAGAAAACTGAGTCAT+GGG - chr3_3:66580437-66580456 None:intergenic 30.0%
TGAACGCAAAATTACCAAAA+GGG - chr3_3:66580788-66580807 None:intergenic 30.0%
TTGAACGCAAAATTACCAAA+AGG - chr3_3:66580789-66580808 None:intergenic 30.0%
GATTCTTATGAGTAGATGTT+TGG - chr3_3:66580834-66580853 None:intergenic 30.0%
!! GAGTTTGAGAGAATTGATTT+TGG - chr3_3:66580911-66580930 None:intergenic 30.0%
ATGAGCTAATAGAACTAAGA+GGG + chr3_3:66581106-66581125 Msa0466040:CDS 30.0%
! TCTAGGATATGGATATTGTT+TGG - chr3_3:66581244-66581263 None:intergenic 30.0%
TACTCCTTTCTTCATATAGT+GGG - chr3_3:66581463-66581482 None:intergenic 30.0%
!!! AGAACTTTGGAATGAGTTTT+TGG - chr3_3:66581706-66581725 None:intergenic 30.0%
ACTCATTCCAAAGTTCTTTA+AGG + chr3_3:66581709-66581728 Msa0466040:CDS 30.0%
TTAGCATCCTTAAAGAACTT+TGG - chr3_3:66581719-66581738 None:intergenic 30.0%
TGTTTGAACTTACTCTTGTA+TGG - chr3_3:66581779-66581798 None:intergenic 30.0%
!!! ATTCTTTTGGTTTTCAGATG+TGG + chr3_3:66581902-66581921 Msa0466040:CDS 30.0%
TAACCAATTGGATGCTATAT+GGG - chr3_3:66581959-66581978 None:intergenic 30.0%
TTAACCAATTGGATGCTATA+TGG - chr3_3:66581960-66581979 None:intergenic 30.0%
ATATAGCATCCAATTGGTTA+AGG + chr3_3:66581959-66581978 Msa0466040:intron 30.0%
!! GCATCCAATTTACTTTTCAA+AGG - chr3_3:66582104-66582123 None:intergenic 30.0%
!! CTATTTTTCCTTACTAGTGA+AGG + chr3_3:66582400-66582419 Msa0466040:CDS 30.0%
TCAATATTCCTTCACTAGTA+AGG - chr3_3:66582411-66582430 None:intergenic 30.0%
ATATTGGTGGAATCAGAATT+AGG - chr3_3:66582502-66582521 None:intergenic 30.0%
CTGTGTGTTGCAATTATAAT+AGG - chr3_3:66582704-66582723 None:intergenic 30.0%
AAGTTCTCATTAATGCAAGT+GGG + chr3_3:66582807-66582826 Msa0466040:CDS 30.0%
ATGTAAACATGTCTTGGTTT+CGG + chr3_3:66583060-66583079 Msa0466040:intron 30.0%
! CAATGTGGTTTTCATAAAGA+AGG - chr3_3:66583134-66583153 None:intergenic 30.0%
TATGGGATGCAATTAAACAA+TGG + chr3_3:66583273-66583292 Msa0466040:CDS 30.0%
ATGGGATGCAATTAAACAAT+GGG + chr3_3:66583274-66583293 Msa0466040:CDS 30.0%
! TAGCAATTGTTGGTCTATTA+GGG - chr3_3:66583538-66583557 None:intergenic 30.0%
! AATGTTGCTTGAATTTGTGA+TGG - chr3_3:66583647-66583666 None:intergenic 30.0%
ACAAAAAATAGAGCCATCTT+GGG + chr3_3:66583724-66583743 Msa0466040:CDS 30.0%
! CATCCTTTGAAAAGTTACAA+AGG + chr3_3:66583768-66583787 Msa0466040:CDS 30.0%
! TCTCCTTTGTAACTTTTCAA+AGG - chr3_3:66583774-66583793 None:intergenic 30.0%
AGGAGATTGAATGAAATTGA+AGG + chr3_3:66583788-66583807 Msa0466040:CDS 30.0%
!! TTGAAGGTATTATAGACTCA+AGG + chr3_3:66583804-66583823 Msa0466040:CDS 30.0%
AGGAATTTGAAGAATAGACA+TGG + chr3_3:66583836-66583855 Msa0466040:CDS 30.0%
!! AATGGCTTTAATGACTCATA+AGG - chr3_3:66583875-66583894 None:intergenic 30.0%
!! AGTCATTAAAGCCATTTTCA+GGG + chr3_3:66583879-66583898 Msa0466040:CDS 30.0%
GTTTAAATGGATATGCTGTA+TGG - chr3_3:66583929-66583948 None:intergenic 30.0%
TGTACCAAACTAGGTTTAAA+TGG - chr3_3:66583942-66583961 None:intergenic 30.0%
ATCTAGCACATAGAAAATGT+AGG - chr3_3:66583988-66584007 None:intergenic 30.0%
TCTATGTGCTAGATTTGTAT+TGG + chr3_3:66583994-66584013 Msa0466040:three_prime_UTR 30.0%
! ATATCATATGGTTGGTTGGT+TGG - chr3_3:66576669-66576688 None:intergenic 35.0%
TGGTTCTTGAAATCTTCTCT+AGG + chr3_3:66576820-66576839 Msa0466040:CDS 35.0%
ATAAGAGTAGTGATGGCAAA+AGG + chr3_3:66576880-66576899 Msa0466040:CDS 35.0%
! AAAAGCTTTAGTGAGTGTGA+AGG + chr3_3:66576939-66576958 Msa0466040:CDS 35.0%
TAAGTTGTGACATGGAAAGA+TGG - chr3_3:66577278-66577297 None:intergenic 35.0%
! CTGATAGTTAAGTTGTGACA+TGG - chr3_3:66577286-66577305 None:intergenic 35.0%
TTTGGTTGTGAGGTAAGAAT+AGG - chr3_3:66577451-66577470 None:intergenic 35.0%
TTTCGTTTCCTAACGGAAAA+GGG - chr3_3:66577490-66577509 None:intergenic 35.0%
ATTTCGTTTCCTAACGGAAA+AGG - chr3_3:66577491-66577510 None:intergenic 35.0%
ATAATAACATTGGGTGTGCA+AGG + chr3_3:66577723-66577742 Msa0466040:intron 35.0%
GACTAACAAAGTCTACATTC+AGG - chr3_3:66578042-66578061 None:intergenic 35.0%
ACTAACGAAGTTTGCATTCA+GGG - chr3_3:66578073-66578092 None:intergenic 35.0%
! TAGTCACTTTAATCCCTGAA+TGG - chr3_3:66578209-66578228 None:intergenic 35.0%
CTTAGTTAGACCATTTCCAA+TGG + chr3_3:66578408-66578427 Msa0466040:intron 35.0%
! CCTAAATTTTATCTTCCCGA+TGG - chr3_3:66578452-66578471 None:intergenic 35.0%
CCATCGGGAAGATAAAATTT+AGG + chr3_3:66578449-66578468 Msa0466040:intron 35.0%
TGTGGATCTCACTTAAGAAT+GGG - chr3_3:66578514-66578533 None:intergenic 35.0%
CAAATGATTCATGACAATGG+TGG - chr3_3:66578742-66578761 None:intergenic 35.0%
!! ATTGAGAGAAGTATTCTCCA+AGG - chr3_3:66578850-66578869 None:intergenic 35.0%
! AAATTAGTAGCGGGAAGAAA+CGG - chr3_3:66578873-66578892 None:intergenic 35.0%
AGTCGATCAAAATTAGTAGC+GGG - chr3_3:66578882-66578901 None:intergenic 35.0%
TCTTCATGCAAATAAGGTTG+CGG - chr3_3:66579052-66579071 None:intergenic 35.0%
!!! TTTTTTCTCTGTTTCGTGTG+CGG - chr3_3:66579107-66579126 None:intergenic 35.0%
!! ACCAGCAAATTTTGGAAATG+TGG + chr3_3:66579162-66579181 Msa0466040:CDS 35.0%
!! CCAGCAAATTTTGGAAATGT+GGG + chr3_3:66579163-66579182 Msa0466040:CDS 35.0%
ATTGACAATTAAGGTGGACA+GGG - chr3_3:66579264-66579283 None:intergenic 35.0%
TCCACCTTAATTGTCAATCA+TGG + chr3_3:66579266-66579285 Msa0466040:CDS 35.0%
TCCATGATTGACAATTAAGG+TGG - chr3_3:66579270-66579289 None:intergenic 35.0%
!! TTTGTAGGAGTATCATGCTT+AGG - chr3_3:66579298-66579317 None:intergenic 35.0%
ACTAACACACTCATGCATAT+GGG + chr3_3:66579370-66579389 Msa0466040:intron 35.0%
! TGGGTCGCAATAAATTTTGT+TGG + chr3_3:66579389-66579408 Msa0466040:intron 35.0%
! GGGTCGCAATAAATTTTGTT+GGG + chr3_3:66579390-66579409 Msa0466040:intron 35.0%
GATCTTAATCCAACAACTAC+TGG + chr3_3:66579603-66579622 Msa0466040:intron 35.0%
TCTTGTGTACGGAGAAAATT+CGG + chr3_3:66579792-66579811 Msa0466040:intron 35.0%
ACCCATCTTGTATGTTCAAT+AGG + chr3_3:66579828-66579847 Msa0466040:intron 35.0%
!!! TTTTTTACCGCTAAACAAGG+TGG + chr3_3:66579864-66579883 Msa0466040:intron 35.0%
GAAGTTTCATACCTATATCG+TGG + chr3_3:66579886-66579905 Msa0466040:intron 35.0%
GACTCAACAAGGATATAGTT+GGG - chr3_3:66580052-66580071 None:intergenic 35.0%
!! TTCCAGTTTTTAAGAAACGC+CGG - chr3_3:66580340-66580359 None:intergenic 35.0%
AACTGAGTCATGGGTAATTA+GGG - chr3_3:66580428-66580447 None:intergenic 35.0%
AAACTGAGTCATGGGTAATT+AGG - chr3_3:66580429-66580448 None:intergenic 35.0%
GGTAATAGAAAACTGAGTCA+TGG - chr3_3:66580438-66580457 None:intergenic 35.0%
! TGACTCAGTTTTCTATTACC+AGG + chr3_3:66580438-66580457 Msa0466040:intron 35.0%
GAACGCAAAATTACCAAAAG+GGG - chr3_3:66580787-66580806 None:intergenic 35.0%
ATATACGTGTGTGTTTGGTA+TGG - chr3_3:66580963-66580982 None:intergenic 35.0%
CAACTATATACGTGTGTGTT+TGG - chr3_3:66580968-66580987 None:intergenic 35.0%
GATGAGCTAATAGAACTAAG+AGG + chr3_3:66581105-66581124 Msa0466040:CDS 35.0%
CTAATAGAACTAAGAGGGAA+TGG + chr3_3:66581111-66581130 Msa0466040:CDS 35.0%
GTACTCCTTTCTTCATATAG+TGG - chr3_3:66581464-66581483 None:intergenic 35.0%
AATACTTCTGCCGTATCTTT+AGG + chr3_3:66581542-66581561 Msa0466040:CDS 35.0%
TGTAGTCAAGCCTAAAGATA+CGG - chr3_3:66581555-66581574 None:intergenic 35.0%
GAGTCATTGGATTCAAGATT+TGG - chr3_3:66581674-66581693 None:intergenic 35.0%
TTGGAGAAAATTCGAGTCAT+TGG - chr3_3:66581687-66581706 None:intergenic 35.0%
! TATCAAAGCGCACGATATTT+TGG - chr3_3:66581748-66581767 None:intergenic 35.0%
AACTTACTCTTGTATGGTTC+CGG - chr3_3:66581773-66581792 None:intergenic 35.0%
ATCAATGTGAATATGTGCCT+CGG + chr3_3:66581864-66581883 Msa0466040:intron 35.0%
! TTGTAGGGGATAGATTCTTT+TGG + chr3_3:66581889-66581908 Msa0466040:intron 35.0%
! GTGGCCTTTGAAAAGTAAAT+TGG + chr3_3:66582097-66582116 Msa0466040:CDS 35.0%
AAATTGGATGCCCAAATCTA+TGG + chr3_3:66582113-66582132 Msa0466040:CDS 35.0%
!! TCTCTAGTAATTGCTGATTC+TGG - chr3_3:66582143-66582162 None:intergenic 35.0%
AACTTATAGCACAGTTGAAG+AGG + chr3_3:66582184-66582203 Msa0466040:CDS 35.0%
!! TCTCTCAGTTTGCTAACATA+TGG - chr3_3:66582346-66582365 None:intergenic 35.0%
ATTGAGGGAACAACACTATA+TGG + chr3_3:66582367-66582386 Msa0466040:CDS 35.0%
ATTCTGATTCCACCAATATC+TGG + chr3_3:66582503-66582522 Msa0466040:CDS 35.0%
ATGAACAAGAACATGAGCTT+TGG - chr3_3:66582542-66582561 None:intergenic 35.0%
CATGTTCTTGTTCATGATTC+TGG + chr3_3:66582547-66582566 Msa0466040:CDS 35.0%
ATCATGAGCTAATAAGCCAT+TGG + chr3_3:66582572-66582591 Msa0466040:CDS 35.0%
GAAGTTCTCATTAATGCAAG+TGG + chr3_3:66582806-66582825 Msa0466040:CDS 35.0%
CTGTGGCATATGATAATCTT+TGG + chr3_3:66582879-66582898 Msa0466040:intron 35.0%
!! TCTTTGGCAATTTGATTTGC+AGG + chr3_3:66582895-66582914 Msa0466040:intron 35.0%
CAATGACGGTCTTCTAATAT+GGG + chr3_3:66583256-66583275 Msa0466040:CDS 35.0%
ACATCATTACCACTATAGCT+TGG + chr3_3:66583453-66583472 Msa0466040:CDS 35.0%
! CTAGCAATTGTTGGTCTATT+AGG - chr3_3:66583539-66583558 None:intergenic 35.0%
TTTCCCATTCTTCCTTAGTA+GGG - chr3_3:66583583-66583602 None:intergenic 35.0%
! TTTTCCCATTCTTCCTTAGT+AGG - chr3_3:66583584-66583603 None:intergenic 35.0%
GACAAAAAATAGAGCCATCT+TGG + chr3_3:66583723-66583742 Msa0466040:CDS 35.0%
CAAAAAATAGAGCCATCTTG+GGG + chr3_3:66583725-66583744 Msa0466040:CDS 35.0%
GGGTGAGAATTCAACTATAA+AGG + chr3_3:66583745-66583764 Msa0466040:CDS 35.0%
TAGACTCAAGGAATGAAGAT+AGG + chr3_3:66583816-66583835 Msa0466040:CDS 35.0%
!! GAGTCATTAAAGCCATTTTC+AGG + chr3_3:66583878-66583897 Msa0466040:CDS 35.0%
TTTCTCCGTCCTATAATTGG+AGG + chr3_3:66576767-66576786 Msa0466040:CDS 40.0%
TTGTGACATGGAAAGATGGA+GGG - chr3_3:66577274-66577293 None:intergenic 40.0%
TCTCACAAACGATTCGTCAT+TGG - chr3_3:66577393-66577412 None:intergenic 40.0%
! TACTATGACCCTTTTCCGTT+AGG + chr3_3:66577479-66577498 Msa0466040:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+CGG + chr3_3:66577966-66577985 Msa0466040:intron 40.0%
GACTAACGAAGTTTGCATTC+AGG - chr3_3:66578074-66578093 None:intergenic 40.0%
ACTAACGGAGTCTACATTCA+GGG - chr3_3:66578105-66578124 None:intergenic 40.0%
TCAGGGACTAAAGTGACTAA+CGG - chr3_3:66578120-66578139 None:intergenic 40.0%
CTTTAATCCCTGAATGGAAG+AGG - chr3_3:66578203-66578222 None:intergenic 40.0%
AGTTAGACCATTTCCAATGG+AGG + chr3_3:66578411-66578430 Msa0466040:intron 40.0%
GTGGATCTCACTTAAGAATG+GGG - chr3_3:66578513-66578532 None:intergenic 40.0%
GTGTGGATCTCACTTAAGAA+TGG - chr3_3:66578515-66578534 None:intergenic 40.0%
! TGGTTTGTCTCTTGAAACCT+TGG + chr3_3:66578830-66578849 Msa0466040:intron 40.0%
TTCATGCAAATAAGGTTGCG+GGG - chr3_3:66579050-66579069 None:intergenic 40.0%
CTTCATGCAAATAAGGTTGC+GGG - chr3_3:66579051-66579070 None:intergenic 40.0%
CATGAAGAAGCAAACTCGAA+GGG + chr3_3:66579064-66579083 Msa0466040:intron 40.0%
TCGAAGGGAGAGACAATAAA+AGG + chr3_3:66579079-66579098 Msa0466040:CDS 40.0%
CCCACATTTCCAAAATTTGC+TGG - chr3_3:66579166-66579185 None:intergenic 40.0%
GATTGACAATTAAGGTGGAC+AGG - chr3_3:66579265-66579284 None:intergenic 40.0%
CACTAACACACTCATGCATA+TGG + chr3_3:66579369-66579388 Msa0466040:intron 40.0%
AACAATCACCGATGTTTGGA+TGG - chr3_3:66579502-66579521 None:intergenic 40.0%
GATCAACAATCACCGATGTT+TGG - chr3_3:66579506-66579525 None:intergenic 40.0%
GATTGTTGATCTCGCACAAA+TGG + chr3_3:66579515-66579534 Msa0466040:intron 40.0%
CTGCGTCAAATTGTTAACTC+CGG + chr3_3:66579633-66579652 Msa0466040:intron 40.0%
AACTCTTAAGCAAGCAAGTC+AGG + chr3_3:66579754-66579773 Msa0466040:intron 40.0%
ACTCTTAAGCAAGCAAGTCA+GGG + chr3_3:66579755-66579774 Msa0466040:intron 40.0%
!! CGAATACTGACTCTTGTGTA+CGG + chr3_3:66579781-66579800 Msa0466040:intron 40.0%
GAAAATTCGGTTGAGATGAG+AGG + chr3_3:66579805-66579824 Msa0466040:intron 40.0%
! GAAACTTCCACCTTGTTTAG+CGG - chr3_3:66579874-66579893 None:intergenic 40.0%
TATAGTTGGGACTAGGGAAT+GGG - chr3_3:66580039-66580058 None:intergenic 40.0%
ATATAGTTGGGACTAGGGAA+TGG - chr3_3:66580040-66580059 None:intergenic 40.0%
CAAGGATATAGTTGGGACTA+GGG - chr3_3:66580045-66580064 None:intergenic 40.0%
ACAAGGATATAGTTGGGACT+AGG - chr3_3:66580046-66580065 None:intergenic 40.0%
CGACTCAACAAGGATATAGT+TGG - chr3_3:66580053-66580072 None:intergenic 40.0%
GACAATACGTAGTACCTGTT+TGG + chr3_3:66580198-66580217 Msa0466040:intron 40.0%
! TCTAAACTCCGGTTTGAGAT+GGG - chr3_3:66580235-66580254 None:intergenic 40.0%
GGTGTTTGGATAACTGCAAA+CGG + chr3_3:66580284-66580303 Msa0466040:intron 40.0%
GTGTTTGGATAACTGCAAAC+GGG + chr3_3:66580285-66580304 Msa0466040:intron 40.0%
!! TTTTTAAGAAACGCCGGTTG+GGG - chr3_3:66580334-66580353 None:intergenic 40.0%
!! GTTTTTAAGAAACGCCGGTT+GGG - chr3_3:66580335-66580354 None:intergenic 40.0%
!! AGTTTTTAAGAAACGCCGGT+TGG - chr3_3:66580336-66580355 None:intergenic 40.0%
AACCGGCGTTTCTTAAAAAC+TGG + chr3_3:66580335-66580354 Msa0466040:intron 40.0%
AGATGGTTTAAGGATCGTTG+TGG - chr3_3:66580485-66580504 None:intergenic 40.0%
!! AATCCACTTGGTGTTTGTGA+TGG - chr3_3:66581069-66581088 None:intergenic 40.0%
CTCAGCTTTCTTAATCCACT+TGG - chr3_3:66581081-66581100 None:intergenic 40.0%
ACCTCAAAAGACCTGTTCTT+GGG + chr3_3:66581214-66581233 Msa0466040:CDS 40.0%
TGTATCAGAATGCTTTCGAC+CGG - chr3_3:66581277-66581296 None:intergenic 40.0%
CAGACCCACTATATGAAGAA+AGG + chr3_3:66581456-66581475 Msa0466040:intron 40.0%
ACTTACTCTTGTATGGTTCC+GGG - chr3_3:66581772-66581791 None:intergenic 40.0%
AATATGTGCCTCGGAATTGT+AGG + chr3_3:66581873-66581892 Msa0466040:intron 40.0%
ATATGTGCCTCGGAATTGTA+GGG + chr3_3:66581874-66581893 Msa0466040:intron 40.0%
CAATTGGATGCTATATGGGT+TGG - chr3_3:66581955-66581974 None:intergenic 40.0%
CAACCCATATAGCATCCAAT+TGG + chr3_3:66581953-66581972 Msa0466040:CDS 40.0%
ATGTCCATGCCTTAACCAAT+TGG - chr3_3:66581971-66581990 None:intergenic 40.0%
TTGGGTTCATTTGATAGGAG+TGG + chr3_3:66582078-66582097 Msa0466040:intron 40.0%
! TTCTGGTGGACCATAGATTT+GGG - chr3_3:66582126-66582145 None:intergenic 40.0%
! ATTCTGGTGGACCATAGATT+TGG - chr3_3:66582127-66582146 None:intergenic 40.0%
!! CTAGTAATTGCTGATTCTGG+TGG - chr3_3:66582140-66582159 None:intergenic 40.0%
TAGCAAACTGAGAGAGATTG+AGG + chr3_3:66582351-66582370 Msa0466040:CDS 40.0%
AGCAAACTGAGAGAGATTGA+GGG + chr3_3:66582352-66582371 Msa0466040:CDS 40.0%
! ATTCCACCAATATCTGGCTT+TGG + chr3_3:66582509-66582528 Msa0466040:CDS 40.0%
ACCTAATTGGTACTCACCAA+TGG - chr3_3:66582591-66582610 None:intergenic 40.0%
GCTAAGAACTCATTGTGTTG+TGG + chr3_3:66582676-66582695 Msa0466040:CDS 40.0%
! TCCACATCTGAGATATACCA+TGG + chr3_3:66582763-66582782 Msa0466040:CDS 40.0%
TCCATGGTATATCTCAGATG+TGG - chr3_3:66582767-66582786 None:intergenic 40.0%
CGCAACTTTATTGATCTCCA+TGG - chr3_3:66582783-66582802 None:intergenic 40.0%
TACAATGGAGTTAAGCTCTG+TGG + chr3_3:66582862-66582881 Msa0466040:intron 40.0%
CACTAAATCAGACACCAGAT+AGG + chr3_3:66582981-66583000 Msa0466040:intron 40.0%
GTCAGTATTAGTGTCCTATC+TGG - chr3_3:66582998-66583017 None:intergenic 40.0%
!! TTTTCTAAGAGGAATGGCTG+TGG + chr3_3:66583178-66583197 Msa0466040:intron 40.0%
GAAGATCCTAATGCACAACA+TGG + chr3_3:66583200-66583219 Msa0466040:CDS 40.0%
TTCACTCCATGTTGTGCATT+AGG - chr3_3:66583209-66583228 None:intergenic 40.0%
! GACTATCCTTTTGCCAATGA+CGG + chr3_3:66583242-66583261 Msa0466040:CDS 40.0%
CCATATTAGAAGACCGTCAT+TGG - chr3_3:66583258-66583277 None:intergenic 40.0%
CCAATGACGGTCTTCTAATA+TGG + chr3_3:66583255-66583274 Msa0466040:CDS 40.0%
GATTCAAGAATGTCTGAGCT+TGG - chr3_3:66583326-66583345 None:intergenic 40.0%
ACAAATCTGAAGAACCATGG+TGG + chr3_3:66583399-66583418 Msa0466040:CDS 40.0%
AAGACCCTACTAAGGAAGAA+TGG + chr3_3:66583576-66583595 Msa0466040:CDS 40.0%
AGACCCTACTAAGGAAGAAT+GGG + chr3_3:66583577-66583596 Msa0466040:CDS 40.0%
!! CATTCCAAAAGTGTTTGCTC+TGG - chr3_3:66583620-66583639 None:intergenic 40.0%
! TCACCAGATGAAGAGTACAT+TGG + chr3_3:66583701-66583720 Msa0466040:CDS 40.0%
TGTCCAATGTACTCTTCATC+TGG - chr3_3:66583707-66583726 None:intergenic 40.0%
TTGAAGAATAGACATGGAGC+TGG + chr3_3:66583842-66583861 Msa0466040:CDS 40.0%
ACTCTTGCATGTACCAAACT+AGG - chr3_3:66583951-66583970 None:intergenic 40.0%
AAGGTTTGCATAAGAAGGGG+TGG + chr3_3:66576847-66576866 Msa0466040:CDS 45.0%
GTGAGTGTGAAGGAAAGTGA+TGG + chr3_3:66576949-66576968 Msa0466040:CDS 45.0%
AGTGTGAAGGAAAGTGATGG+TGG + chr3_3:66576952-66576971 Msa0466040:CDS 45.0%
GTTGTGACATGGAAAGATGG+AGG - chr3_3:66577275-66577294 None:intergenic 45.0%
AGAGAGATAGACAGAGAGAG+GGG - chr3_3:66577680-66577699 None:intergenic 45.0%
CAGAGAGATAGACAGAGAGA+GGG - chr3_3:66577681-66577700 None:intergenic 45.0%
TCAGAGAGATAGACAGAGAG+AGG - chr3_3:66577682-66577701 None:intergenic 45.0%
ACTTTAGTCCCTGAATCGGA+AGG + chr3_3:66577970-66577989 Msa0466040:intron 45.0%
CTTTAGTCCCTGAATCGGAA+GGG + chr3_3:66577971-66577990 Msa0466040:intron 45.0%
GACTAACGGAGTCTACATTC+AGG - chr3_3:66578106-66578125 None:intergenic 45.0%
TCCCTGAAATTGACCATGCA+GGG + chr3_3:66578133-66578152 Msa0466040:intron 45.0%
TCCCTGCATGGTCAATTTCA+GGG - chr3_3:66578137-66578156 None:intergenic 45.0%
ATTGCAAAACAGTCCCTGCA+TGG - chr3_3:66578149-66578168 None:intergenic 45.0%
TGACGAATCCTCTTCCATTC+AGG + chr3_3:66578192-66578211 Msa0466040:intron 45.0%
GACGAATCCTCTTCCATTCA+GGG + chr3_3:66578193-66578212 Msa0466040:intron 45.0%
TCAGGATCCTCCATTGGAAA+TGG - chr3_3:66578421-66578440 None:intergenic 45.0%
ATTTGTGTGAGACGCTGAGT+TGG + chr3_3:66578611-66578630 Msa0466040:intron 45.0%
GGAGGGATTGAGTGCTTATT+AGG + chr3_3:66578632-66578651 Msa0466040:intron 45.0%
GCATGAAGAAGCAAACTCGA+AGG + chr3_3:66579063-66579082 Msa0466040:intron 45.0%
!!! TGGAAATGTGGGTGCTGTTT+TGG + chr3_3:66579174-66579193 Msa0466040:CDS 45.0%
TTTGTTGGGACCCACCTAAT+TGG + chr3_3:66579404-66579423 Msa0466040:intron 45.0%
GTCACATGCCATCCAAACAT+CGG + chr3_3:66579491-66579510 Msa0466040:intron 45.0%
AGTCACACACCAGTAGTTGT+TGG - chr3_3:66579615-66579634 None:intergenic 45.0%
CAACACGAATCTAGATCTGC+CGG - chr3_3:66579655-66579674 None:intergenic 45.0%
CTCTTAAGCAAGCAAGTCAG+GGG + chr3_3:66579756-66579775 Msa0466040:intron 45.0%
! AGCGTTTTCCCATCTCAAAC+CGG + chr3_3:66580224-66580243 Msa0466040:intron 45.0%
! CTCTAAACTCCGGTTTGAGA+TGG - chr3_3:66580236-66580255 None:intergenic 45.0%
CATCTCAAACCGGAGTTTAG+AGG + chr3_3:66580234-66580253 Msa0466040:intron 45.0%
AAACGGGATTCTACCAAACG+TGG + chr3_3:66580301-66580320 Msa0466040:intron 45.0%
!! TTTTAAGAAACGCCGGTTGG+GGG - chr3_3:66580333-66580352 None:intergenic 45.0%
! CTTTTGCGGCAACTAAAAGC+TGG + chr3_3:66580367-66580386 Msa0466040:intron 45.0%
TACGTGTGTGTTTGGTATGG+CGG - chr3_3:66580960-66580979 None:intergenic 45.0%
TTGCCATCACAAACACCAAG+TGG + chr3_3:66581063-66581082 Msa0466040:CDS 45.0%
GAACTAAGAGGGAATGGAGA+AGG + chr3_3:66581117-66581136 Msa0466040:CDS 45.0%
!!! AACAGGTCTTTTGAGGTCAG+CGG - chr3_3:66581211-66581230 None:intergenic 45.0%
GACCTCAAAAGACCTGTTCT+TGG + chr3_3:66581213-66581232 Msa0466040:CDS 45.0%
CCTCAAAAGACCTGTTCTTG+GGG + chr3_3:66581215-66581234 Msa0466040:CDS 45.0%
CTCAAAAGACCTGTTCTTGG+GGG + chr3_3:66581216-66581235 Msa0466040:CDS 45.0%
!! GGTCGAAAGCATTCTGATAC+AGG + chr3_3:66581276-66581295 Msa0466040:CDS 45.0%
CTTACTCTTGTATGGTTCCG+GGG - chr3_3:66581771-66581790 None:intergenic 45.0%
TATGTGCCTCGGAATTGTAG+GGG + chr3_3:66581875-66581894 Msa0466040:intron 45.0%
ATCTATCCCCTACAATTCCG+AGG - chr3_3:66581884-66581903 None:intergenic 45.0%
GGAATTTGCCAGAGAGACTT+TGG + chr3_3:66581923-66581942 Msa0466040:CDS 45.0%
GCATCCAATTGGTTAAGGCA+TGG + chr3_3:66581964-66581983 Msa0466040:intron 45.0%
CTAGTGAGCTCAATAGCTAG+TGG - chr3_3:66582436-66582455 None:intergenic 45.0%
CTCACTAGACCACCTATTGA+TGG + chr3_3:66582448-66582467 Msa0466040:CDS 45.0%
! TAGACCACCTATTGATGGCA+AGG + chr3_3:66582453-66582472 Msa0466040:CDS 45.0%
CATTGTGCCTTGCCATCAAT+AGG - chr3_3:66582463-66582482 None:intergenic 45.0%
! CTATTGATGGCAAGGCACAA+TGG + chr3_3:66582461-66582480 Msa0466040:CDS 45.0%
AAGCCTCCAAAGCCAGATAT+TGG - chr3_3:66582518-66582537 None:intergenic 45.0%
GCCATTGGTGAGTACCAATT+AGG + chr3_3:66582587-66582606 Msa0466040:intron 45.0%
TTTCGGACACAGACATGTGT+CGG + chr3_3:66583077-66583096 Msa0466040:intron 45.0%
AGAAGACCGTCATTGGCAAA+AGG - chr3_3:66583251-66583270 None:intergenic 45.0%
TGGACAGAGATTCGAACAGT+GGG + chr3_3:66583368-66583387 Msa0466040:CDS 45.0%
CGGACAAATCTGAAGAACCA+TGG + chr3_3:66583396-66583415 Msa0466040:CDS 45.0%
!!! GTTTTGAGATTTGGCCACCA+TGG - chr3_3:66583416-66583435 None:intergenic 45.0%
AGATGCTGTCCAAGCTATAG+TGG - chr3_3:66583465-66583484 None:intergenic 45.0%
TCCTTAGTAGGGTCTTCTGT+AGG - chr3_3:66583572-66583591 None:intergenic 45.0%
!! CCAAAAGTGTTTGCTCTGGT+TGG - chr3_3:66583616-66583635 None:intergenic 45.0%
! CCAACCAGAGCAAACACTTT+TGG + chr3_3:66583613-66583632 Msa0466040:CDS 45.0%
GTTGAATTCTCACCCCAAGA+TGG - chr3_3:66583740-66583759 None:intergenic 45.0%
!! TTAAAGCCATTTTCAGGGCC+TGG + chr3_3:66583884-66583903 Msa0466040:CDS 45.0%
!! AAAAAAAAAAAAAAAAAACT+AGG - chr3_3:66582057-66582076 None:intergenic 5.0%
GGGGAAATATGATCGGAAGG+TGG - chr3_3:66577635-66577654 None:intergenic 50.0%
AGAGATAGACAGAGAGAGGG+GGG - chr3_3:66577678-66577697 None:intergenic 50.0%
GAGAGATAGACAGAGAGAGG+GGG - chr3_3:66577679-66577698 None:intergenic 50.0%
GACGAATCCCTTCCGATTCA+GGG - chr3_3:66577981-66578000 None:intergenic 50.0%
TGACGAATCCCTTCCGATTC+AGG - chr3_3:66577982-66578001 None:intergenic 50.0%
GTCCCTGAAATTGACCATGC+AGG + chr3_3:66578132-66578151 Msa0466040:intron 50.0%
GTCCCTGCATGGTCAATTTC+AGG - chr3_3:66578138-66578157 None:intergenic 50.0%
TACGTGTCAGGATCCTCCAT+TGG - chr3_3:66578427-66578446 None:intergenic 50.0%
GATCCTGACACGTACTCCAT+CGG + chr3_3:66578433-66578452 Msa0466040:intron 50.0%
ATCCTGACACGTACTCCATC+GGG + chr3_3:66578434-66578453 Msa0466040:intron 50.0%
! TAGGGGTCTTATAGGACCCA+TGG + chr3_3:66578468-66578487 Msa0466040:intron 50.0%
! GTCCTTGATGGTTTCCCTGA+TGG + chr3_3:66579238-66579257 Msa0466040:CDS 50.0%
TGGGACCCACCTAATTGGAT+AGG + chr3_3:66579409-66579428 Msa0466040:intron 50.0%
CGGCAGATCTAGATTCGTGT+TGG + chr3_3:66579653-66579672 Msa0466040:intron 50.0%
TCGTGAGTCACGACTCAACA+AGG - chr3_3:66580063-66580082 None:intergenic 50.0%
TTGTTGAGTCGTGACTCACG+AGG + chr3_3:66580062-66580081 Msa0466040:intron 50.0%
GACTCACGAGGAGAGTCTTA+CGG + chr3_3:66580074-66580093 Msa0466040:intron 50.0%
AAGGTCGATGTGATGATCCC+AGG - chr3_3:66580101-66580120 None:intergenic 50.0%
GGGAAAACGCTATGCCAAAC+AGG - chr3_3:66580215-66580234 None:intergenic 50.0%
GCGTTTCAGCCTCTAAACTC+CGG - chr3_3:66580246-66580265 None:intergenic 50.0%
GCGGCAACTAAAAGCTGGTT+TGG + chr3_3:66580372-66580391 Msa0466040:intron 50.0%
GTGCTTGAAACAGAGGAACC+TGG - chr3_3:66580459-66580478 None:intergenic 50.0%
! GTGGCTTGTGCTTGAAACAG+AGG - chr3_3:66580466-66580485 None:intergenic 50.0%
TGTGTGTTTGGTATGGCGGT+GGG - chr3_3:66580956-66580975 None:intergenic 50.0%
TTGAGGTCAGCGGTTATGTC+AGG - chr3_3:66581201-66581220 None:intergenic 50.0%
! CCCCAAGAACAGGTCTTTTG+AGG - chr3_3:66581218-66581237 None:intergenic 50.0%
! GTGCGACATCGTCTAGGATA+TGG - chr3_3:66581255-66581274 None:intergenic 50.0%
TATCCTAGACGATGTCGCAC+CGG + chr3_3:66581255-66581274 Msa0466040:CDS 50.0%
CTTCTATGTTCCTCGTGACG+AGG + chr3_3:66581490-66581509 Msa0466040:CDS 50.0%
TATCGTGCGCTTTGATACCC+CGG + chr3_3:66581751-66581770 Msa0466040:CDS 50.0%
TTTGCCAGAGAGACTTTGGC+TGG + chr3_3:66581927-66581946 Msa0466040:CDS 50.0%
TGTGCCTTGCCATCAATAGG+TGG - chr3_3:66582460-66582479 None:intergenic 50.0%
CCTCCAAAGCCAGATATTGG+TGG - chr3_3:66582515-66582534 None:intergenic 50.0%
!! CCACCAATATCTGGCTTTGG+AGG + chr3_3:66582512-66582531 Msa0466040:CDS 50.0%
CTGATCAAGAGCTCCAAGCA+TGG + chr3_3:66583345-66583364 Msa0466040:CDS 50.0%
ATCAAGAGCTCCAAGCATGG+TGG + chr3_3:66583348-66583367 Msa0466040:CDS 50.0%
GAATCTCTGTCCACCATGCT+TGG - chr3_3:66583361-66583380 None:intergenic 50.0%
GTGGACAGAGATTCGAACAG+TGG + chr3_3:66583367-66583386 Msa0466040:CDS 50.0%
GATTCGAACAGTGGGACATG+CGG + chr3_3:66583376-66583395 Msa0466040:CDS 50.0%
GCCTACAGAAGACCCTACTA+AGG + chr3_3:66583568-66583587 Msa0466040:CDS 50.0%
! ACTCCTTTTCCAGTGACTCC+AGG - chr3_3:66583905-66583924 None:intergenic 50.0%
GAAAGATGGAGGGCTCGCAT+AGG - chr3_3:66577264-66577283 None:intergenic 55.0%
GGGGGGGAAATATGATCGGA+AGG - chr3_3:66577638-66577657 None:intergenic 55.0%
AGATAGACAGAGAGAGGGGG+GGG - chr3_3:66577676-66577695 None:intergenic 55.0%
GAGATAGACAGAGAGAGGGG+GGG - chr3_3:66577677-66577696 None:intergenic 55.0%
TTCCCGATGGAGTACGTGTC+AGG - chr3_3:66578439-66578458 None:intergenic 55.0%
! TGTGTGAGACGCTGAGTTGG+AGG + chr3_3:66578614-66578633 Msa0466040:intron 55.0%
! GTGTGAGACGCTGAGTTGGA+GGG + chr3_3:66578615-66578634 Msa0466040:intron 55.0%
GGCCATCAGGGAAACCATCA+AGG - chr3_3:66579243-66579262 None:intergenic 55.0%
TAAGGTGGACAGGGCCATCA+GGG - chr3_3:66579255-66579274 None:intergenic 55.0%
TTAAGGTGGACAGGGCCATC+AGG - chr3_3:66579256-66579275 None:intergenic 55.0%
CTAGGGAATGGGAGGAGATG+TGG - chr3_3:66580028-66580047 None:intergenic 55.0%
AGTTGGGACTAGGGAATGGG+AGG - chr3_3:66580036-66580055 None:intergenic 55.0%
GAGGAGAGTCTTACGGTCCT+GGG + chr3_3:66580081-66580100 Msa0466040:intron 55.0%
TTGGGGGCTAGATCCACGTT+TGG - chr3_3:66580317-66580336 None:intergenic 55.0%
GTGTGTTTGGTATGGCGGTG+GGG - chr3_3:66580955-66580974 None:intergenic 55.0%
GTGTGTGTTTGGTATGGCGG+TGG - chr3_3:66580957-66580976 None:intergenic 55.0%
!! TGTTTGGTGCCCCCAAGAAC+AGG - chr3_3:66581228-66581247 None:intergenic 55.0%
TCAGCAAATGCCTCGTCACG+AGG - chr3_3:66581503-66581522 None:intergenic 55.0%
GTGACTCCAGGCCCTGAAAA+TGG - chr3_3:66583893-66583912 None:intergenic 55.0%
!! TTTTCAGGGCCTGGAGTCAC+TGG + chr3_3:66583893-66583912 Msa0466040:CDS 55.0%
GGGGGGGGGGGAAATATGAT+CGG - chr3_3:66577642-66577661 None:intergenic 60.0%
ATAGACAGAGAGAGGGGGGG+GGG - chr3_3:66577674-66577693 None:intergenic 60.0%
GATAGACAGAGAGAGGGGGG+GGG - chr3_3:66577675-66577694 None:intergenic 60.0%
CGAGGAGAGTCTTACGGTCC+TGG + chr3_3:66580080-66580099 Msa0466040:intron 60.0%
ACGTGGATCTAGCCCCCAAC+CGG + chr3_3:66580318-66580337 Msa0466040:intron 60.0%
GGCACCAGCCAAAGTCTCTC+TGG - chr3_3:66581934-66581953 None:intergenic 60.0%
GGGCCTGGAGTCACTGGAAA+AGG + chr3_3:66583899-66583918 Msa0466040:CDS 60.0%
TAGACAGAGAGAGGGGGGGG+GGG - chr3_3:66577673-66577692 None:intergenic 65.0%
CGACCGGTGCGACATCGTCT+AGG - chr3_3:66581261-66581280 None:intergenic 65.0%
AGACAGAGAGAGGGGGGGGG+GGG - chr3_3:66577672-66577691 None:intergenic 70.0%
ACAGAGAGAGGGGGGGGGGG+GGG - chr3_3:66577670-66577689 None:intergenic 75.0%
GACAGAGAGAGGGGGGGGGG+GGG - chr3_3:66577671-66577690 None:intergenic 75.0%
! AGAGAGAGGGGGGGGGGGGG+GGG - chr3_3:66577668-66577687 None:intergenic 80.0%
! CAGAGAGAGGGGGGGGGGGG+GGG - chr3_3:66577669-66577688 None:intergenic 80.0%
! AGAGAGGGGGGGGGGGGGGG+GGG - chr3_3:66577666-66577685 None:intergenic 85.0%
! GAGAGAGGGGGGGGGGGGGG+GGG - chr3_3:66577667-66577686 None:intergenic 85.0%
! AGAGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577664-66577683 None:intergenic 90.0%
! GAGAGGGGGGGGGGGGGGGG+GGG - chr3_3:66577665-66577684 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577662-66577681 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG - chr3_3:66577663-66577682 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66576618 66584125 66576618 ID=Msa0466040;Name=Msa0466040
chr3_3 mRNA 66576618 66584125 66576618 ID=Msa0466040-mRNA-1;Parent=Msa0466040;Name=Msa0466040-mRNA-1;_AED=0.08;_eAED=0.08;_QI=64|0.75|0.77|1|1|1|9|179|881
chr3_3 exon 66576618 66577054 66576618 ID=Msa0466040-mRNA-1:exon:15084;Parent=Msa0466040-mRNA-1
chr3_3 exon 66579071 66579339 66579071 ID=Msa0466040-mRNA-1:exon:15085;Parent=Msa0466040-mRNA-1
chr3_3 exon 66581057 66581297 66581057 ID=Msa0466040-mRNA-1:exon:15086;Parent=Msa0466040-mRNA-1
chr3_3 exon 66581459 66581785 66581459 ID=Msa0466040-mRNA-1:exon:15087;Parent=Msa0466040-mRNA-1
chr3_3 exon 66581895 66581974 66581895 ID=Msa0466040-mRNA-1:exon:15088;Parent=Msa0466040-mRNA-1
chr3_3 exon 66582095 66582205 66582095 ID=Msa0466040-mRNA-1:exon:15089;Parent=Msa0466040-mRNA-1
chr3_3 exon 66582292 66582593 66582292 ID=Msa0466040-mRNA-1:exon:15090;Parent=Msa0466040-mRNA-1
chr3_3 exon 66582676 66582858 66582676 ID=Msa0466040-mRNA-1:exon:15091;Parent=Msa0466040-mRNA-1
chr3_3 exon 66583187 66584125 66583187 ID=Msa0466040-mRNA-1:exon:15092;Parent=Msa0466040-mRNA-1
chr3_3 five_prime_UTR 66576618 66576681 66576618 ID=Msa0466040-mRNA-1:five_prime_utr;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66576682 66577054 66576682 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66579071 66579339 66579071 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66581057 66581297 66581057 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66581459 66581785 66581459 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66581895 66581974 66581895 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66582095 66582205 66582095 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66582292 66582593 66582292 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66582676 66582858 66582676 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 CDS 66583187 66583946 66583187 ID=Msa0466040-mRNA-1:cds;Parent=Msa0466040-mRNA-1
chr3_3 three_prime_UTR 66583947 66584125 66583947 ID=Msa0466040-mRNA-1:three_prime_utr;Parent=Msa0466040-mRNA-1
Gene Sequence

>Msa0466040

ATGATATTATATCTTGGTGGAAATATGACATATTTGTTGAAGAAGCCATATGTACATCAATCATTCATCACTAATAGTGCAATATTTTCTCCGTCCTATAATTGGAGGAAAAATATTTCTCACAACAATAGTACTAATTGGTTCTTGAAATCTTCTCTAGGTAAAAAGGTTTGCATAAGAAGGGGTGGTTCTAGTTGTATAAGAGTAGTGATGGCAAAAGGAAGTAGCAGCAGTGACAACAAATCTCATCATAATGTAAAAGCTTTAGTGAGTGTGAAGGAAAGTGATGGTGGCCTCATCAAGAATATTGTTACTGGTATTGTTGGTAACAAACACTTAATTTTGGAGTTAGTCAGTGCTGAGCTTGATCCAAAAGCAAACTCGAAGGGAGAGACAATAAAAGGAACCGCACACGAAACAGAGAAAAAAGAGAAAGAGGTGCAGTATGAAGCAACATTTGAGTTACCAGCAAATTTTGGAAATGTGGGTGCTGTTTTGGTTGAGAATGAACATGACAAAGAGATATTTCTAAAGAATATAGTCCTTGATGGTTTCCCTGATGGCCCTGTCCACCTTAATTGTCAATCATGGATTCAGCCTAAGCATGATACTCCTACAAAGAGAGTTTTCTTCATTAACAAGATGTATTTGCCATCACAAACACCAAGTGGATTAAGAAAGCTGAGAGAAGATGAGCTAATAGAACTAAGAGGGAATGGAGAAGGAGAGCGTAAGAAATCCGACAGAATCTATGATTATGATGTCTATAATGATCTTGGAGATCCTGACATAACCGCTGACCTCAAAAGACCTGTTCTTGGGGGCACCAAACAATATCCATATCCTAGACGATGTCGCACCGGTCGAAAGCATTCTGATACAGACCCACTATATGAAGAAAGGAGTACTTTAGACTTCTATGTTCCTCGTGACGAGGCATTTGCTGAAACAAAGCAGACACAATTCAATACTTCTGCCGTATCTTTAGGCTTGACTACAATTATTCAATCATTAGACGCAATAGTCACTGATATAAATCTTGGGTTTGAAAACTTTGAAGACATAGAAGCAATTTACAAAGAAGGATTTCAGTTACCAAATCTTGAATCCAATGACTCGAATTTTCTCCAAAAACTCATTCCAAAGTTCTTTAAGGATGCTAACGATAGCCAAAATATCGTGCGCTTTGATACCCCGGAACCATACAAGAGGGATAGATTCTTTTGGTTTTCAGATGTGGAATTTGCCAGAGAGACTTTGGCTGGTGCCAACCCATATAGCATCCAATTGGAGTGGCCTTTGAAAAGTAAATTGGATGCCCAAATCTATGGTCCACCAGAATCAGCAATTACTAGAGAGATCATTGAGTCACAAATCACAACTTATAGCACAGTTGAAGAGGCTATTAAAGAGAAGAAGTTGTTCATGCTAGACTATCATGATTTTTACTTACCATATGTTAGCAAACTGAGAGAGATTGAGGGAACAACACTATATGGATCAAGAACACTATTTTTCCTTACTAGTGAAGGAATATTGAAGCCACTAGCTATTGAGCTCACTAGACCACCTATTGATGGCAAGGCACAATGGAAGCAAGTCTTCACACCTAATTCTGATTCCACCAATATCTGGCTTTGGAGGCTTGCCAAAGCTCATGTTCTTGTTCATGATTCTGGTCATCATGAGCTAATAAGCCATTGGCTAAGAACTCATTGTGTTGTGGAACCTATTATAATTGCAACACACAGACAACTCAGTTCCATGCATCCAATTTTTAGATTATTGCATCCACATCTGAGATATACCATGGAGATCAATAAAGTTGCGCGTGAAGTTCTCATTAATGCAAGTGGGCTCCTTGAAATATCATTCTTTTCGAATAAAGGAATGGCTGTGGAAGATCCTAATGCACAACATGGAGTGAAGCTAATAATTGAAGACTATCCTTTTGCCAATGACGGTCTTCTAATATGGGATGCAATTAAACAATGGGTTACAGAATATGTCAATCATTACTATCCAAGCTCAGACATTCTTGAATCTGATCAAGAGCTCCAAGCATGGTGGACAGAGATTCGAACAGTGGGACATGCGGACAAATCTGAAGAACCATGGTGGCCAAATCTCAAAACACAAAATGATCTTATTAACATCATTACCACTATAGCTTGGACAGCATCTGCTCATCATTCAGCTGTTAACTTTACACAATATGCTTATATAGGCTTTTTCCCTAATAGACCAACAATTGCTAGAAAGAAAATGCCTACAGAAGACCCTACTAAGGAAGAATGGGAAAAATTTATGAACCAACCAGAGCAAACACTTTTGGAATGTTTTCCATCACAAATTCAAGCAACATTATTTATGATTGTTATGAGCATATTATCAGAACATTCACCAGATGAAGAGTACATTGGACAAAAAATAGAGCCATCTTGGGGTGAGAATTCAACTATAAAGGCATCCTTTGAAAAGTTACAAAGGAGATTGAATGAAATTGAAGGTATTATAGACTCAAGGAATGAAGATAGGAATTTGAAGAATAGACATGGAGCTGGAATAGTGCCTTATGAGTCATTAAAGCCATTTTCAGGGCCTGGAGTCACTGGAAAAGGAGTCCCATACAGCATATCCATTTAA
Protein sequence

>Msa0466040

MILYLGGNMTYLLKKPYVHQSFITNSAIFSPSYNWRKNISHNNSTNWFLKSSLGKKVCIRRGGSSCIRVVMAKGSSSSDNKSHHNVKALVSVKESDGGLIKNIVTGIVGNKHLILELVSAELDPKANSKGETIKGTAHETEKKEKEVQYEATFELPANFGNVGAVLVENEHDKEIFLKNIVLDGFPDGPVHLNCQSWIQPKHDTPTKRVFFINKMYLPSQTPSGLRKLREDELIELRGNGEGERKKSDRIYDYDVYNDLGDPDITADLKRPVLGGTKQYPYPRRCRTGRKHSDTDPLYEERSTLDFYVPRDEAFAETKQTQFNTSAVSLGLTTIIQSLDAIVTDINLGFENFEDIEAIYKEGFQLPNLESNDSNFLQKLIPKFFKDANDSQNIVRFDTPEPYKRDRFFWFSDVEFARETLAGANPYSIQLEWPLKSKLDAQIYGPPESAITREIIESQITTYSTVEEAIKEKKLFMLDYHDFYLPYVSKLREIEGTTLYGSRTLFFLTSEGILKPLAIELTRPPIDGKAQWKQVFTPNSDSTNIWLWRLAKAHVLVHDSGHHELISHWLRTHCVVEPIIIATHRQLSSMHPIFRLLHPHLRYTMEINKVAREVLINASGLLEISFFSNKGMAVEDPNAQHGVKLIIEDYPFANDGLLIWDAIKQWVTEYVNHYYPSSDILESDQELQAWWTEIRTVGHADKSEEPWWPNLKTQNDLINIITTIAWTASAHHSAVNFTQYAYIGFFPNRPTIARKKMPTEDPTKEEWEKFMNQPEQTLLECFPSQIQATLFMIVMSILSEHSPDEEYIGQKIEPSWGENSTIKASFEKLQRRLNEIEGIIDSRNEDRNLKNRHGAGIVPYESLKPFSGPGVTGKGVPYSISI*