AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0648190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648190 MtrunA17_Chr4g0040231 97.263 475 12 1 1 474 1 475 0.0 948
Msa0648190 MtrunA17_Chr4g0040001 83.298 467 77 1 1 466 1 467 0.0 771
Msa0648190 MtrunA17_Chr4g0040221 80.591 474 88 2 1 474 1 470 0.0 756
Msa0648190 MtrunA17_Chr4g0040011 82.658 444 70 2 1 443 9 446 0.0 716
Msa0648190 MtrunA17_Chr4g0040261 65.517 464 155 3 5 467 37 496 0.0 617
Msa0648190 MtrunA17_Chr4g0040251 61.935 465 171 4 5 467 4 464 0.0 591
Msa0648190 MtrunA17_Chr4g0040271 64.524 420 143 4 5 423 4 418 0.0 557
Msa0648190 MtrunA17_Chr7g0217051 56.710 462 196 3 7 467 8 466 0.0 547
Msa0648190 MtrunA17_Chr7g0248011 45.798 476 248 5 2 474 3 471 1.67e-146 427
Msa0648190 MtrunA17_Chr6g0457271 50.704 355 173 2 67 420 5 358 4.32e-127 374
Msa0648190 MtrunA17_Chr6g0457281 48.464 293 144 3 87 375 1 290 3.50e-95 289
Msa0648190 MtrunA17_Chr1g0147071 26.608 451 293 9 10 437 10 445 7.46e-50 177
Msa0648190 MtrunA17_Chr5g0393471 30.100 299 198 7 169 462 43 335 2.68e-28 114
Msa0648190 MtrunA17_Chr6g0457291 49.296 71 36 0 398 468 1 71 2.30e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648190 AT3G49190.1 27.632 456 295 8 7 437 15 460 5.48e-55 192
Msa0648190 AT5G53390.1 29.228 479 304 15 9 466 14 478 7.60e-53 185
Msa0648190 AT3G49210.1 26.680 491 321 9 10 466 26 511 8.66e-49 175
Msa0648190 AT3G49200.1 26.106 452 305 9 10 437 26 472 4.46e-47 170
Msa0648190 AT2G38995.2 27.389 471 316 10 10 466 21 479 9.61e-47 169
Msa0648190 AT5G16350.3 28.054 442 290 14 7 437 4 428 1.08e-46 168
Msa0648190 AT1G72110.1 26.752 471 322 8 7 464 9 469 3.10e-46 167
Msa0648190 AT5G12420.1 26.096 456 302 12 5 437 3 446 1.77e-45 165
Msa0648190 AT5G22490.1 27.536 483 303 15 11 466 12 474 2.70e-45 165
Msa0648190 AT5G16350.1 27.233 459 292 14 7 437 4 448 1.07e-44 163
Msa0648190 AT5G12420.2 26.636 428 279 12 5 409 3 418 2.76e-44 162
Msa0648190 AT5G37300.1 27.791 421 281 9 56 463 60 470 2.44e-43 159
Msa0648190 AT5G37300.4 27.791 421 281 9 56 463 78 488 3.75e-43 159
Msa0648190 AT2G38995.3 26.214 412 285 6 66 466 7 410 3.65e-41 152
Msa0648190 AT1G72110.2 25.690 471 318 9 7 464 9 460 3.67e-41 153
Msa0648190 AT5G53380.1 26.269 453 294 13 9 437 8 444 3.98e-39 148
Msa0648190 AT5G16350.2 28.212 397 243 14 7 375 4 386 4.56e-39 146
Msa0648190 AT2G38995.4 26.099 364 253 4 66 420 7 363 3.47e-37 140
Msa0648190 AT5G22490.2 28.571 392 233 15 11 375 12 383 6.76e-35 134
Msa0648190 AT3G49210.2 25.854 410 266 8 10 386 26 430 3.03e-34 133
Msa0648190 AT5G37300.2 28.012 332 217 8 56 375 78 399 3.26e-32 127
Msa0648190 AT5G37300.3 28.689 244 163 5 56 295 78 314 2.97e-25 106
Msa0648190 AT2G38995.1 24.775 222 152 4 256 466 72 289 8.17e-15 75.5
Msa0648190 AT2G43255.2 23.671 207 146 4 268 466 8 210 3.39e-13 69.3
Msa0648190 AT2G43255.1 23.757 181 132 3 288 466 33 209 1.55e-12 67.4

Find 116 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCTATGAATCCCTTTA+AGG 0.070555 4_3:-54653518 None:intergenic
CATGATGAATTTATGGTTTC+AGG 0.102874 4_3:-54649618 None:intergenic
TAATTCACATGATGAATTTA+TGG 0.119469 4_3:-54649625 None:intergenic
ATTTATGGTTTCAGGAAATA+TGG 0.171107 4_3:-54649610 None:intergenic
TTTAGCTCCATATCAGATTT+TGG 0.176719 4_3:+54649951 Msa0648190:CDS
TTGGCAAATCATCCAGTAAA+TGG 0.216729 4_3:+54651234 Msa0648190:CDS
CATAGCTTTGCTCTTGGATT+TGG 0.219486 4_3:+54650917 Msa0648190:CDS
AATCACCTTGAAAACCTTAA+AGG 0.243906 4_3:+54653504 Msa0648190:CDS
GTTATGTTTGACAAGATAAA+AGG 0.245138 4_3:-54650053 None:intergenic
AACATAATGGACAAATTCTT+TGG 0.247013 4_3:+54649174 Msa0648190:exon
CCAACCCTCTTGAGTTTGTT+TGG 0.247573 4_3:+54650844 Msa0648190:CDS
CCTTCATATCCTGACCTTAT+AGG 0.252137 4_3:-54650017 None:intergenic
CGATAAAGAGATAAGGAATT+TGG 0.256448 4_3:-54654097 None:intergenic
CAAATTCCTTATCTCTTTAT+CGG 0.271752 4_3:+54654098 Msa0648190:three_prime_UTR
ATGATTCAGTTTGAATATTA+TGG 0.271789 4_3:-54649763 None:intergenic
ATTACGGGAATGATCTTCTA+TGG 0.273585 4_3:+54650624 Msa0648190:CDS
GGAATCTTTAAGTGTTCTTC+AGG 0.290094 4_3:-54649588 None:intergenic
GAGGAGAAGCGTGGGTTGAT+AGG 0.299249 4_3:-54649336 None:intergenic
AAAGCGGTGGCACAATTATT+AGG 0.306594 4_3:-54654019 None:intergenic
GTGAAACACAATCCATTTAC+TGG 0.310704 4_3:-54651246 None:intergenic
CCCACGCTTCTCCTCTATTA+TGG 0.313803 4_3:+54649344 Msa0648190:CDS
AACCAGAGTCTAAAGGTCTA+TGG 0.314366 4_3:+54650763 Msa0648190:CDS
ATATTTGATTGGCTCATCTT+AGG 0.322200 4_3:-54650819 None:intergenic
TCATCAAGGTTTGAGGATTA+TGG 0.322273 4_3:-54654144 None:intergenic
GCTTGATCCAAAATCTGATA+TGG 0.323604 4_3:-54649958 None:intergenic
AAAATAATCTATAACACAAC+TGG 0.341009 4_3:+54651159 Msa0648190:CDS
GACTATAAACGACGTGATTA+CGG 0.342881 4_3:+54650608 Msa0648190:intron
GATTGGCTCATCTTAGGTAT+AGG 0.345904 4_3:-54650813 None:intergenic
ATGCTCAACACAAGAAATAT+TGG 0.356933 4_3:+54650711 Msa0648190:CDS
TTTGCATTTCCTTCACTGAT+TGG 0.357490 4_3:-54650740 None:intergenic
TCCTTATCTCTTTATCGGTT+CGG 0.359292 4_3:+54654103 Msa0648190:three_prime_UTR
TTAGCTGTTATAACCATGTT+TGG 0.365166 4_3:+54653904 Msa0648190:three_prime_UTR
ACTATAAACGACGTGATTAC+GGG 0.373686 4_3:+54650609 Msa0648190:CDS
ATCACCTTGAAAACCTTAAA+GGG 0.380979 4_3:+54653505 Msa0648190:CDS
TATTAGGAATATAAATAGAT+TGG 0.382061 4_3:-54654003 None:intergenic
ACCACAAAATAAACCACTTT+GGG 0.382385 4_3:+54649698 Msa0648190:CDS
TCCTGGATCCTTAGCTTCAT+AGG 0.383949 4_3:-54653638 None:intergenic
TTTATGGTTTCAGGAAATAT+GGG 0.386290 4_3:-54649609 None:intergenic
TATGTAACAAGTATTCTAAA+TGG 0.393222 4_3:+54649669 Msa0648190:CDS
TCCCCACTAATCGTAATTCC+TGG 0.399259 4_3:-54653655 None:intergenic
AGGAGAAGCGTGGGTTGATA+GGG 0.404776 4_3:-54649335 None:intergenic
TTATCTCATAGCTTTGCTCT+TGG 0.413063 4_3:+54650911 Msa0648190:CDS
ACAGCTAATCTCCTAAATTC+TGG 0.414195 4_3:-54653889 None:intergenic
ACGAAGATGGTAAGATGAAA+TGG 0.422013 4_3:+54649547 Msa0648190:CDS
TCTTACACACCACAACATAA+TGG 0.425282 4_3:+54649161 Msa0648190:exon
GATTTGGAAATGAAGTTAAG+AGG 0.426420 4_3:+54650933 Msa0648190:CDS
AAGATGACAAAACACCTATA+AGG 0.442261 4_3:+54650003 Msa0648190:CDS
GTTCTTATGTCAAACATTGT+AGG 0.444388 4_3:+54651192 Msa0648190:CDS
GCCAAAGTCATCTTCTCTAC+TGG 0.454580 4_3:-54651216 None:intergenic
TTGTGTTTCACCATGACAAA+TGG 0.465164 4_3:+54651258 Msa0648190:CDS
CACCACAAAATAAACCACTT+TGG 0.465863 4_3:+54649697 Msa0648190:CDS
ACCTATGAAGCTAAGGATCC+AGG 0.467106 4_3:+54653637 Msa0648190:three_prime_UTR
GAGGGTTGGAGATATTTGAT+TGG 0.467930 4_3:-54650830 None:intergenic
GAGATAAGGAATTTGGAAGA+TGG 0.468178 4_3:-54654090 None:intergenic
GGAGATCTCCATAGCTGCTT+CGG 0.469892 4_3:-54653584 None:intergenic
ACCAGAGTCTAAAGGTCTAT+GGG 0.476949 4_3:+54650764 Msa0648190:CDS
GAATGATCTTCTATGGGATT+AGG 0.478266 4_3:+54650631 Msa0648190:CDS
CCCCATAGACCTTTAGACTC+TGG 0.484139 4_3:-54650765 None:intergenic
GTGCAAGCTGCATTGGTTGT+TGG 0.485670 4_3:-54649741 None:intergenic
ATGGCTAGTGAATTATCAAA+TGG 0.490172 4_3:-54649288 None:intergenic
AGTCATATCCGAAGCAGCTA+TGG 0.494801 4_3:+54653576 Msa0648190:CDS
TTCTTATGTCAAACATTGTA+GGG 0.496830 4_3:+54651193 Msa0648190:CDS
TGGTAAGATGAAATGGCAAA+AGG 0.497110 4_3:+54649554 Msa0648190:CDS
GCAAAATACCTATGAAGCTA+AGG 0.498790 4_3:+54653630 Msa0648190:three_prime_UTR
AATATATAGAACCATAATAG+AGG 0.500079 4_3:-54649355 None:intergenic
GATCCAGGAATTACGATTAG+TGG 0.501913 4_3:+54653652 Msa0648190:three_prime_UTR
CTATGGGATTAGGCTATACA+TGG 0.512779 4_3:+54650641 Msa0648190:CDS
AAAGGAGTTAAATCAAAGCT+TGG 0.513777 4_3:+54650095 Msa0648190:CDS
ATTTGGAAATGAAGTTAAGA+GGG 0.515630 4_3:+54650934 Msa0648190:CDS
ATCCAGGAATTACGATTAGT+GGG 0.518243 4_3:+54653653 Msa0648190:three_prime_UTR
GGAAAAGACAGAGGTAGAGA+AGG 0.520075 4_3:-54649849 None:intergenic
AACACAATCGAGTAAAATCA+TGG 0.522028 4_3:-54653833 None:intergenic
TATTATGGTGCAAGCTGCAT+TGG 0.522660 4_3:-54649748 None:intergenic
GACAAAACACCTATAAGGTC+AGG 0.527058 4_3:+54650008 Msa0648190:CDS
CCTATAAGGTCAGGATATGA+AGG 0.528184 4_3:+54650017 Msa0648190:CDS
TATTGTCCATGAGGACTCAC+TGG 0.534626 4_3:-54649210 None:intergenic
AGGAAAACATAACCTTGAGT+TGG 0.543885 4_3:-54654051 None:intergenic
ATAATATGAATTTCCCAAAG+TGG 0.544140 4_3:-54649711 None:intergenic
GACATCTTTGAGCAAAGGTA+TGG 0.545080 4_3:-54649307 None:intergenic
ATGGTTTCCAAATAAGAAAG+AGG 0.550370 4_3:-54654071 None:intergenic
CAAGAGCCAGTGAGTCCTCA+TGG 0.550809 4_3:+54649204 Msa0648190:CDS
GCCAGTAGAGAAGATGACTT+TGG 0.551665 4_3:+54651215 Msa0648190:CDS
TCCGAACCGATAAAGAGATA+AGG 0.553410 4_3:-54654104 None:intergenic
CACTGGCGATAAAGTGTAGT+GGG 0.555573 4_3:-54653958 None:intergenic
CCAAACAAACTCAAGAGGGT+TGG 0.557987 4_3:-54650844 None:intergenic
TTACGGGAATGATCTTCTAT+GGG 0.560045 4_3:+54650625 Msa0648190:CDS
AGAGTGCTCATCAAGGTTTG+AGG 0.568435 4_3:-54654151 None:intergenic
TTATCTCTTGATCAAATCAA+AGG 0.571391 4_3:+54650077 Msa0648190:CDS
CTCAACACAAGAAATATTGG+AGG 0.579193 4_3:+54650714 Msa0648190:CDS
TTCAAACTGAATCATGCACT+TGG 0.586294 4_3:+54649771 Msa0648190:CDS
TGAAAAGAGAGTGCTCATCA+AGG 0.588103 4_3:-54654158 None:intergenic
TACCTCAGGTCCATTTGTCA+TGG 0.598891 4_3:-54651268 None:intergenic
CTGAATCATGCACTTGGTGA+TGG 0.599550 4_3:+54649777 Msa0648190:CDS
GATCTATCGTAAGCCAAACA+TGG 0.600662 4_3:-54653917 None:intergenic
TCTAATTGTGGTCTTTGTGA+AGG 0.603367 4_3:-54649870 None:intergenic
GCACAGGTAAAAGACGAAGA+TGG 0.604966 4_3:+54649534 Msa0648190:intron
ATGAAGACATCTTTGAGCAA+AGG 0.607249 4_3:-54649312 None:intergenic
CCAGAGTCTAAAGGTCTATG+GGG 0.610837 4_3:+54650765 Msa0648190:CDS
AATGAAGTTAAGAGGGTCTG+AGG 0.613338 4_3:+54650941 Msa0648190:CDS
AACATCAAATTCCACAGCGG+TGG 0.618411 4_3:+54650686 Msa0648190:CDS
AAATAATCTATAACACAACT+GGG 0.623010 4_3:+54651160 Msa0648190:CDS
GTATTCCAAACAAACTCAAG+AGG 0.625691 4_3:-54650849 None:intergenic
TATTCCAAACAAACTCAAGA+GGG 0.627200 4_3:-54650848 None:intergenic
CCATAATAGAGGAGAAGCGT+GGG 0.630256 4_3:-54649344 None:intergenic
AGAATTTGTCCATTATGTTG+TGG 0.632689 4_3:-54649170 None:intergenic
ACCATAATAGAGGAGAAGCG+TGG 0.641346 4_3:-54649345 None:intergenic
TGGAGGTTACCAATCAGTGA+AGG 0.641441 4_3:+54650731 Msa0648190:CDS
ACACTGGCGATAAAGTGTAG+TGG 0.645480 4_3:-54653959 None:intergenic
CACCATGACAAATGGACCTG+AGG 0.647576 4_3:+54651266 Msa0648190:CDS
AGTTAAATCAAAGCTTGGAG+TGG 0.648779 4_3:+54650100 Msa0648190:CDS
ATACTCGTGAACTAATCAAG+AGG 0.649765 4_3:+54650868 Msa0648190:CDS
CTGTTGAAATATTGTCCATG+AGG 0.678022 4_3:-54649219 None:intergenic
CAGAGTCTAAAGGTCTATGG+GGG 0.681142 4_3:+54650766 Msa0648190:CDS
TCCAGGAATTACGATTAGTG+GGG 0.689537 4_3:+54653654 Msa0648190:three_prime_UTR
CTTTGTGAAGGAAAAGACAG+AGG 0.693859 4_3:-54649858 None:intergenic
GTTGAGCATTACCACCGCTG+TGG 0.706678 4_3:-54650697 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTAATTAAAATTTGGT+AGG - chr4_3:54649414-54649433 None:intergenic 10.0%
!!! ACCAAATTTTAATTAATATA+AGG + chr4_3:54649414-54649433 Msa0648190:intron 10.0%
!!! ATCATTAATTATTTTATTCA+CGG + chr4_3:54649498-54649517 Msa0648190:intron 10.0%
!!! ATTTTATAATCTAACTTAAT+TGG - chr4_3:54650146-54650165 None:intergenic 10.0%
!!! TAGATTATAAAATTAGATTT+TGG + chr4_3:54650227-54650246 Msa0648190:intron 10.0%
!! AACAAGAAAAAAATTATTTA+CGG - chr4_3:54651677-54651696 None:intergenic 10.0%
!!! TTTAATTAAATTTTTATGTC+GGG + chr4_3:54651993-54652012 Msa0648190:intron 10.0%
!!! TTATTAAAATTAAAAGTGTT+TGG + chr4_3:54652132-54652151 Msa0648190:intron 10.0%
!!! CATAAATACATTTATAATTT+TGG - chr4_3:54652296-54652315 None:intergenic 10.0%
!!! TATACTTTTTTTTTTTTTGA+AGG - chr4_3:54652610-54652629 None:intergenic 10.0%
!!! ATAATTTGTTAAATATGATA+TGG - chr4_3:54653243-54653262 None:intergenic 10.0%
!!! TTTTATAATTCGTTAAATAT+AGG - chr4_3:54653293-54653312 None:intergenic 10.0%
!! GCCTTATATTAATTAAAATT+TGG - chr4_3:54649418-54649437 None:intergenic 15.0%
!!! TTAATTAATATAAGGCATTA+AGG + chr4_3:54649422-54649441 Msa0648190:intron 15.0%
!!! AAAATAGTGTATTTTTTCAT+CGG - chr4_3:54650445-54650464 None:intergenic 15.0%
!! TTAACTCTTTATATTGTTAT+TGG + chr4_3:54650516-54650535 Msa0648190:intron 15.0%
!! ATATATATATCATTGGATTA+AGG + chr4_3:54650554-54650573 Msa0648190:intron 15.0%
!! TTAATTATGGCATATATAAA+TGG + chr4_3:54650581-54650600 Msa0648190:intron 15.0%
!!! ATGAATGAAAATAAAGTTTT+AGG - chr4_3:54650996-54651015 None:intergenic 15.0%
!!! ATTAATGTTCTCTATTTTAT+TGG + chr4_3:54651114-54651133 Msa0648190:intron 15.0%
!!! TTAATGTTCTCTATTTTATT+GGG + chr4_3:54651115-54651134 Msa0648190:intron 15.0%
!! AAAAATAATATATATACCTC+AGG - chr4_3:54651285-54651304 None:intergenic 15.0%
!! AATGAATGTTAGAAAATAAA+AGG - chr4_3:54651540-54651559 None:intergenic 15.0%
!!! TTTCTTGTTTATATTTGAAT+TGG + chr4_3:54651688-54651707 Msa0648190:intron 15.0%
!!! AATCATGAACTTTTTTTTTT+TGG + chr4_3:54651808-54651827 Msa0648190:intron 15.0%
!! TAACTATAAAATGACATAAA+AGG + chr4_3:54652180-54652199 Msa0648190:intron 15.0%
!!! GAAAATATTACTGATTATAT+AGG - chr4_3:54652490-54652509 None:intergenic 15.0%
!! AATTAAGAAAAGGTTAAAAT+TGG + chr4_3:54652737-54652756 Msa0648190:intron 15.0%
!!! TAATATGTACCTTTTAAAAA+TGG + chr4_3:54653073-54653092 Msa0648190:intron 15.0%
!!! TTAAATATAGGTGTTATTTA+TGG - chr4_3:54653281-54653300 None:intergenic 15.0%
!!! ATTTTGCAATTAATTTTTTG+TGG - chr4_3:54653617-54653636 None:intergenic 15.0%
!!! TTGGTTAGTTAAAAATATTA+GGG - chr4_3:54653987-54654006 None:intergenic 15.0%
!!! ATTGGTTAGTTAAAAATATT+AGG - chr4_3:54653988-54654007 None:intergenic 15.0%
!! TATTAGGAATATAAATAGAT+TGG - chr4_3:54654006-54654025 None:intergenic 15.0%
!! AATATATAGAACCATAATAG+AGG - chr4_3:54649358-54649377 None:intergenic 20.0%
!! GTAAAGTAATTAATGAAGTA+TGG - chr4_3:54649385-54649404 None:intergenic 20.0%
!! TAATTCACATGATGAATTTA+TGG - chr4_3:54649628-54649647 None:intergenic 20.0%
!! TATGTAACAAGTATTCTAAA+TGG + chr4_3:54649669-54649688 Msa0648190:CDS 20.0%
!! ATGATTCAGTTTGAATATTA+TGG - chr4_3:54649766-54649785 None:intergenic 20.0%
!! AAATTACAAAATTGCTATGT+AGG + chr4_3:54650162-54650181 Msa0648190:intron 20.0%
!! AAAATAATCTATAACACAAC+TGG + chr4_3:54651159-54651178 Msa0648190:CDS 20.0%
!! AAATAATCTATAACACAACT+GGG + chr4_3:54651160-54651179 Msa0648190:CDS 20.0%
!! CTAAATATCATTGTTTGAAA+AGG - chr4_3:54651514-54651533 None:intergenic 20.0%
!! ATAGGGATATATATAAATTG+TGG - chr4_3:54651568-54651587 None:intergenic 20.0%
!! ATTGATGTGATAAATATGAT+AGG - chr4_3:54651610-54651629 None:intergenic 20.0%
!!! TTTGATTTTCAACAAAATCA+CGG - chr4_3:54651742-54651761 None:intergenic 20.0%
!! TATGTCATTACAAAGAAATA+GGG + chr4_3:54652552-54652571 Msa0648190:intron 20.0%
!! AAATATACACAAAAACCAAA+GGG - chr4_3:54652953-54652972 None:intergenic 20.0%
!! AAAATATACACAAAAACCAA+AGG - chr4_3:54652954-54652973 None:intergenic 20.0%
!!! ACTTTTTGACCATTTTTAAA+AGG - chr4_3:54653085-54653104 None:intergenic 20.0%
!!! ATTGACTCTTCTATTTTAAT+TGG - chr4_3:54653182-54653201 None:intergenic 20.0%
!! ATATGATATGGTATTTGAAT+AGG - chr4_3:54653231-54653250 None:intergenic 20.0%
!!! TTAATTTTTTGTGGATATCT+CGG - chr4_3:54653608-54653627 None:intergenic 20.0%
!!! AACATAATGGACAAATTCTT+TGG + chr4_3:54649174-54649193 Msa0648190:exon 25.0%
!!! AAGGTCAATTTTGATTATTG+AGG - chr4_3:54649473-54649492 None:intergenic 25.0%
! TTTATGGTTTCAGGAAATAT+GGG - chr4_3:54649612-54649631 None:intergenic 25.0%
! ATTTATGGTTTCAGGAAATA+TGG - chr4_3:54649613-54649632 None:intergenic 25.0%
! ATAATATGAATTTCCCAAAG+TGG - chr4_3:54649714-54649733 None:intergenic 25.0%
!!! GCATATTTTGAATCTAATTG+TGG - chr4_3:54649885-54649904 None:intergenic 25.0%
! GTTATGTTTGACAAGATAAA+AGG - chr4_3:54650056-54650075 None:intergenic 25.0%
! TTATCTCTTGATCAAATCAA+AGG + chr4_3:54650077-54650096 Msa0648190:CDS 25.0%
!! TCTAACTTAATTGGTCTAAA+TGG - chr4_3:54650137-54650156 None:intergenic 25.0%
!!! GTTTGTATAGTTCTAAAGAA+AGG + chr4_3:54650267-54650286 Msa0648190:intron 25.0%
!! GGATTAAGGTTGATTAATTA+TGG + chr4_3:54650568-54650587 Msa0648190:intron 25.0%
! ATTTGGAAATGAAGTTAAGA+GGG + chr4_3:54650934-54650953 Msa0648190:CDS 25.0%
!!! AAAATAAAGTTTTAGGTGAG+TGG - chr4_3:54650989-54651008 None:intergenic 25.0%
! AGAAGCTCAAAACTAAATAA+TGG - chr4_3:54651087-54651106 None:intergenic 25.0%
!! TTTTATTGGGTTTGTATTTC+AGG + chr4_3:54651128-54651147 Msa0648190:intron 25.0%
! TTCTTATGTCAAACATTGTA+GGG + chr4_3:54651193-54651212 Msa0648190:CDS 25.0%
! GGTTATATAGTTGGAAAATA+GGG - chr4_3:54651585-54651604 None:intergenic 25.0%
! ATGTGATAAATATGATAGGT+GGG - chr4_3:54651606-54651625 None:intergenic 25.0%
! GAATGATTTAGTCAAACTAA+CGG + chr4_3:54651778-54651797 Msa0648190:intron 25.0%
!!! TGAACTTTTTTTTTTTGGAG+AGG + chr4_3:54651813-54651832 Msa0648190:intron 25.0%
!!! TTTTGGCTTGAAATTTTCTT+TGG + chr4_3:54651878-54651897 Msa0648190:intron 25.0%
! CTATGTCATTACAAAGAAAT+AGG + chr4_3:54652551-54652570 Msa0648190:intron 25.0%
! CTGTTCTATACTTAGTAATT+AGG - chr4_3:54652584-54652603 None:intergenic 25.0%
! GAAAATTTAAAAAGCCAACA+TGG + chr4_3:54652652-54652671 Msa0648190:intron 25.0%
! CACTTAGAGATAAATACATA+TGG + chr4_3:54653016-54653035 Msa0648190:intron 25.0%
! AAAACACTTCTTTATATGCT+AGG + chr4_3:54653379-54653398 Msa0648190:intron 25.0%
! AAACACTTCTTTATATGCTA+GGG + chr4_3:54653380-54653399 Msa0648190:intron 25.0%
! AAAACTTCAAAAACGTAAAG+AGG - chr4_3:54653713-54653732 None:intergenic 25.0%
!! TTTTCTTTAGCAAATATGCA+TGG + chr4_3:54653729-54653748 Msa0648190:three_prime_UTR 25.0%
! TAAAAATATTAGGGTTACAC+TGG - chr4_3:54653978-54653997 None:intergenic 25.0%
!! ATGTTTTCCTCTTTCTTATT+TGG + chr4_3:54654064-54654083 Msa0648190:three_prime_UTR 25.0%
! CAAATTCCTTATCTCTTTAT+CGG + chr4_3:54654098-54654117 Msa0648190:three_prime_UTR 25.0%
AGAATTTGTCCATTATGTTG+TGG - chr4_3:54649173-54649192 None:intergenic 30.0%
! GTGATGTGTTCATATGTTTT+TGG + chr4_3:54649246-54649265 Msa0648190:CDS 30.0%
!!! TTCATATGTTTTTGGCTTTC+TGG + chr4_3:54649254-54649273 Msa0648190:CDS 30.0%
ATGGCTAGTGAATTATCAAA+TGG - chr4_3:54649291-54649310 None:intergenic 30.0%
CATGATGAATTTATGGTTTC+AGG - chr4_3:54649621-54649640 None:intergenic 30.0%
ACCACAAAATAAACCACTTT+GGG + chr4_3:54649698-54649717 Msa0648190:CDS 30.0%
ATCTGATATGGAGCTAAAAA+AGG - chr4_3:54649949-54649968 None:intergenic 30.0%
!! TTTAGCTCCATATCAGATTT+TGG + chr4_3:54649951-54649970 Msa0648190:CDS 30.0%
AAGATGACAAAACACCTATA+AGG + chr4_3:54650003-54650022 Msa0648190:CDS 30.0%
AAAGGAGTTAAATCAAAGCT+TGG + chr4_3:54650095-54650114 Msa0648190:CDS 30.0%
AAAAACATCAAATTCCACAG+CGG + chr4_3:54650683-54650702 Msa0648190:CDS 30.0%
ATGCTCAACACAAGAAATAT+TGG + chr4_3:54650711-54650730 Msa0648190:CDS 30.0%
! ATATTTGATTGGCTCATCTT+AGG - chr4_3:54650822-54650841 None:intergenic 30.0%
TATTCCAAACAAACTCAAGA+GGG - chr4_3:54650851-54650870 None:intergenic 30.0%
GATTTGGAAATGAAGTTAAG+AGG + chr4_3:54650933-54650952 Msa0648190:CDS 30.0%
GTTCTTATGTCAAACATTGT+AGG + chr4_3:54651192-54651211 Msa0648190:CDS 30.0%
GGGTTATATAGTTGGAAAAT+AGG - chr4_3:54651586-54651605 None:intergenic 30.0%
GATGTGATAAATATGATAGG+TGG - chr4_3:54651607-54651626 None:intergenic 30.0%
TCTCTCTAATAGTATACACA+AGG + chr4_3:54651640-54651659 Msa0648190:intron 30.0%
! ATCTTACTCGTGTTCTATTT+TGG + chr4_3:54651861-54651880 Msa0648190:intron 30.0%
ATATATAAGTGTGTGATGTG+AGG - chr4_3:54651943-54651962 None:intergenic 30.0%
TAGGTTTGTCAATGTACAAT+TGG - chr4_3:54652471-54652490 None:intergenic 30.0%
CTATAAGCTAAAAAGCTACT+TGG + chr4_3:54652783-54652802 Msa0648190:intron 30.0%
AATCACCTTGAAAACCTTAA+AGG + chr4_3:54653504-54653523 Msa0648190:CDS 30.0%
ATCACCTTGAAAACCTTAAA+GGG + chr4_3:54653505-54653524 Msa0648190:CDS 30.0%
TTCATCTATGAATCCCTTTA+AGG - chr4_3:54653521-54653540 None:intergenic 30.0%
AACACAATCGAGTAAAATCA+TGG - chr4_3:54653836-54653855 None:intergenic 30.0%
! TTTTCTCTTCACCAGAATTT+AGG + chr4_3:54653878-54653897 Msa0648190:three_prime_UTR 30.0%
TTAGCTGTTATAACCATGTT+TGG + chr4_3:54653904-54653923 Msa0648190:three_prime_UTR 30.0%
!!! TTTTTAGCTATTCCAACTCA+AGG + chr4_3:54654039-54654058 Msa0648190:three_prime_UTR 30.0%
ATGGTTTCCAAATAAGAAAG+AGG - chr4_3:54654074-54654093 None:intergenic 30.0%
CGATAAAGAGATAAGGAATT+TGG - chr4_3:54654100-54654119 None:intergenic 30.0%
TCTTACACACCACAACATAA+TGG + chr4_3:54649161-54649180 Msa0648190:exon 35.0%
CTGTTGAAATATTGTCCATG+AGG - chr4_3:54649222-54649241 None:intergenic 35.0%
ATGAAGACATCTTTGAGCAA+AGG - chr4_3:54649315-54649334 None:intergenic 35.0%
!! CGGCTTTAATTAATTTGCAC+AGG + chr4_3:54649518-54649537 Msa0648190:intron 35.0%
ACGAAGATGGTAAGATGAAA+TGG + chr4_3:54649547-54649566 Msa0648190:CDS 35.0%
TGGTAAGATGAAATGGCAAA+AGG + chr4_3:54649554-54649573 Msa0648190:CDS 35.0%
GGAATCTTTAAGTGTTCTTC+AGG - chr4_3:54649591-54649610 None:intergenic 35.0%
CACCACAAAATAAACCACTT+TGG + chr4_3:54649697-54649716 Msa0648190:CDS 35.0%
!!! TCCCAAAGTGGTTTATTTTG+TGG - chr4_3:54649702-54649721 None:intergenic 35.0%
TTCAAACTGAATCATGCACT+TGG + chr4_3:54649771-54649790 Msa0648190:CDS 35.0%
TCTAATTGTGGTCTTTGTGA+AGG - chr4_3:54649873-54649892 None:intergenic 35.0%
GCTTGATCCAAAATCTGATA+TGG - chr4_3:54649961-54649980 None:intergenic 35.0%
AGTTAAATCAAAGCTTGGAG+TGG + chr4_3:54650100-54650119 Msa0648190:CDS 35.0%
AAGATAAGATGGTCCTTACA+TGG - chr4_3:54650370-54650389 None:intergenic 35.0%
TCAACCACATGAAGATAAGA+TGG - chr4_3:54650381-54650400 None:intergenic 35.0%
GACTATAAACGACGTGATTA+CGG + chr4_3:54650608-54650627 Msa0648190:intron 35.0%
ACTATAAACGACGTGATTAC+GGG + chr4_3:54650609-54650628 Msa0648190:CDS 35.0%
ATTACGGGAATGATCTTCTA+TGG + chr4_3:54650624-54650643 Msa0648190:CDS 35.0%
TTACGGGAATGATCTTCTAT+GGG + chr4_3:54650625-54650644 Msa0648190:CDS 35.0%
GAATGATCTTCTATGGGATT+AGG + chr4_3:54650631-54650650 Msa0648190:CDS 35.0%
CTCAACACAAGAAATATTGG+AGG + chr4_3:54650714-54650733 Msa0648190:CDS 35.0%
TTTGCATTTCCTTCACTGAT+TGG - chr4_3:54650743-54650762 None:intergenic 35.0%
ATGCAAAAACCAGAGTCTAA+AGG + chr4_3:54650756-54650775 Msa0648190:CDS 35.0%
GTATTCCAAACAAACTCAAG+AGG - chr4_3:54650852-54650871 None:intergenic 35.0%
ATACTCGTGAACTAATCAAG+AGG + chr4_3:54650868-54650887 Msa0648190:CDS 35.0%
! TTATCTCATAGCTTTGCTCT+TGG + chr4_3:54650911-54650930 Msa0648190:CDS 35.0%
TATTGGGTTTGTATTTCAGG+TGG + chr4_3:54651131-54651150 Msa0648190:intron 35.0%
TTGGCAAATCATCCAGTAAA+TGG + chr4_3:54651234-54651253 Msa0648190:CDS 35.0%
GTGAAACACAATCCATTTAC+TGG - chr4_3:54651249-54651268 None:intergenic 35.0%
TTGTGTTTCACCATGACAAA+TGG + chr4_3:54651258-54651277 Msa0648190:CDS 35.0%
!! TGATAGGTGGGTTATATAGT+TGG - chr4_3:54651594-54651613 None:intergenic 35.0%
! ATTTTTATGTCGGGTGTGTT+TGG + chr4_3:54652002-54652021 Msa0648190:intron 35.0%
ATAGCAATCTGATAGAAGAC+TGG + chr4_3:54652521-54652540 Msa0648190:intron 35.0%
AAAGCCAACATGGTAAATCA+TGG + chr4_3:54652662-54652681 Msa0648190:intron 35.0%
CTAACCATGATTTACCATGT+TGG - chr4_3:54652669-54652688 None:intergenic 35.0%
!! TGGTTAGTTTCATAAGATCG+TGG + chr4_3:54652682-54652701 Msa0648190:intron 35.0%
!! GGTTAGTTTCATAAGATCGT+GGG + chr4_3:54652683-54652702 Msa0648190:intron 35.0%
! TAAGCTAGCTTATAGCTTGT+TGG - chr4_3:54652897-54652916 None:intergenic 35.0%
AGAAGAGTCAATCGTTGAAT+CGG + chr4_3:54653190-54653209 Msa0648190:intron 35.0%
ACTTCTTTATATGCTAGGGT+TGG + chr4_3:54653384-54653403 Msa0648190:intron 35.0%
! CATGCTTTACTTCTTGTTTG+TGG + chr4_3:54653434-54653453 Msa0648190:intron 35.0%
!!! GAATCCCTTTAAGGTTTTCA+AGG - chr4_3:54653512-54653531 None:intergenic 35.0%
ATCCAGGAATTACGATTAGT+GGG + chr4_3:54653653-54653672 Msa0648190:three_prime_UTR 35.0%
ACAGCTAATCTCCTAAATTC+TGG - chr4_3:54653892-54653911 None:intergenic 35.0%
GAGTTGGAATAGCTAAAAAG+CGG - chr4_3:54654038-54654057 None:intergenic 35.0%
AGGAAAACATAACCTTGAGT+TGG - chr4_3:54654054-54654073 None:intergenic 35.0%
GAGATAAGGAATTTGGAAGA+TGG - chr4_3:54654093-54654112 None:intergenic 35.0%
! TCCTTATCTCTTTATCGGTT+CGG + chr4_3:54654103-54654122 Msa0648190:three_prime_UTR 35.0%
TCATCAAGGTTTGAGGATTA+TGG - chr4_3:54654147-54654166 None:intergenic 35.0%
GACATCTTTGAGCAAAGGTA+TGG - chr4_3:54649310-54649329 None:intergenic 40.0%
TATTATGGTGCAAGCTGCAT+TGG - chr4_3:54649751-54649770 None:intergenic 40.0%
CTTTGTGAAGGAAAAGACAG+AGG - chr4_3:54649861-54649880 None:intergenic 40.0%
GACAAAACACCTATAAGGTC+AGG + chr4_3:54650008-54650027 Msa0648190:CDS 40.0%
CCTTCATATCCTGACCTTAT+AGG - chr4_3:54650020-54650039 None:intergenic 40.0%
CCTATAAGGTCAGGATATGA+AGG + chr4_3:54650017-54650036 Msa0648190:CDS 40.0%
TACTGACACTCAACCATGTA+AGG + chr4_3:54650354-54650373 Msa0648190:intron 40.0%
AGGACCATCTTATCTTCATG+TGG + chr4_3:54650374-54650393 Msa0648190:intron 40.0%
TTCATGTGGTTGACTGTGTA+TGG + chr4_3:54650388-54650407 Msa0648190:intron 40.0%
TGGTTGACTGTGTATGGTAA+CGG + chr4_3:54650394-54650413 Msa0648190:intron 40.0%
CTATGGGATTAGGCTATACA+TGG + chr4_3:54650641-54650660 Msa0648190:CDS 40.0%
AACCAGAGTCTAAAGGTCTA+TGG + chr4_3:54650763-54650782 Msa0648190:CDS 40.0%
ACCAGAGTCTAAAGGTCTAT+GGG + chr4_3:54650764-54650783 Msa0648190:CDS 40.0%
! GATTGGCTCATCTTAGGTAT+AGG - chr4_3:54650816-54650835 None:intergenic 40.0%
GAGGGTTGGAGATATTTGAT+TGG - chr4_3:54650833-54650852 None:intergenic 40.0%
! CATAGCTTTGCTCTTGGATT+TGG + chr4_3:54650917-54650936 Msa0648190:CDS 40.0%
AATGAAGTTAAGAGGGTCTG+AGG + chr4_3:54650941-54650960 Msa0648190:CDS 40.0%
GCACTATTTGCCACAATTCA+AGG + chr4_3:54651381-54651400 Msa0648190:intron 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr4_3:54651384-54651403 Msa0648190:intron 40.0%
ATAAGTGTGTGATGTGAGGT+TGG - chr4_3:54651939-54651958 None:intergenic 40.0%
!!! AAGCTAGCTTTTCAGCTATC+AGG - chr4_3:54652067-54652086 None:intergenic 40.0%
GATCCAGGAATTACGATTAG+TGG + chr4_3:54653652-54653671 Msa0648190:three_prime_UTR 40.0%
TCCAGGAATTACGATTAGTG+GGG + chr4_3:54653654-54653673 Msa0648190:three_prime_UTR 40.0%
GATCTATCGTAAGCCAAACA+TGG - chr4_3:54653920-54653939 None:intergenic 40.0%
AAAGCGGTGGCACAATTATT+AGG - chr4_3:54654022-54654041 None:intergenic 40.0%
TTGGAATAGCTAAAAAGCGG+TGG - chr4_3:54654035-54654054 None:intergenic 40.0%
TCCGAACCGATAAAGAGATA+AGG - chr4_3:54654107-54654126 None:intergenic 40.0%
!! TGAAAAGAGAGTGCTCATCA+AGG - chr4_3:54654161-54654180 None:intergenic 40.0%
TATTGTCCATGAGGACTCAC+TGG - chr4_3:54649213-54649232 None:intergenic 45.0%
! CCATAATAGAGGAGAAGCGT+GGG - chr4_3:54649347-54649366 None:intergenic 45.0%
ACCATAATAGAGGAGAAGCG+TGG - chr4_3:54649348-54649367 None:intergenic 45.0%
GCACAGGTAAAAGACGAAGA+TGG + chr4_3:54649534-54649553 Msa0648190:intron 45.0%
! CTGAATCATGCACTTGGTGA+TGG + chr4_3:54649777-54649796 Msa0648190:CDS 45.0%
GGAAAAGACAGAGGTAGAGA+AGG - chr4_3:54649852-54649871 None:intergenic 45.0%
AGCTTGGAGTGGTAAGAGTT+TGG + chr4_3:54650111-54650130 Msa0648190:intron 45.0%
!! GTGTATGGTAACGGACTTGT+CGG + chr4_3:54650403-54650422 Msa0648190:intron 45.0%
AACATCAAATTCCACAGCGG+TGG + chr4_3:54650686-54650705 Msa0648190:CDS 45.0%
TGGAGGTTACCAATCAGTGA+AGG + chr4_3:54650731-54650750 Msa0648190:CDS 45.0%
CCAGAGTCTAAAGGTCTATG+GGG + chr4_3:54650765-54650784 Msa0648190:CDS 45.0%
CAGAGTCTAAAGGTCTATGG+GGG + chr4_3:54650766-54650785 Msa0648190:CDS 45.0%
CCAAACAAACTCAAGAGGGT+TGG - chr4_3:54650847-54650866 None:intergenic 45.0%
! CCAACCCTCTTGAGTTTGTT+TGG + chr4_3:54650844-54650863 Msa0648190:CDS 45.0%
GCCAGTAGAGAAGATGACTT+TGG + chr4_3:54651215-54651234 Msa0648190:CDS 45.0%
GCCAAAGTCATCTTCTCTAC+TGG - chr4_3:54651219-54651238 None:intergenic 45.0%
TACCTCAGGTCCATTTGTCA+TGG - chr4_3:54651271-54651290 None:intergenic 45.0%
ACCAAAGGGAGCTTTCATGA+CGG - chr4_3:54652939-54652958 None:intergenic 45.0%
AGTCATATCCGAAGCAGCTA+TGG + chr4_3:54653576-54653595 Msa0648190:CDS 45.0%
TCCCCACTAATCGTAATTCC+TGG - chr4_3:54653658-54653677 None:intergenic 45.0%
CACTGGCGATAAAGTGTAGT+GGG - chr4_3:54653961-54653980 None:intergenic 45.0%
ACACTGGCGATAAAGTGTAG+TGG - chr4_3:54653962-54653981 None:intergenic 45.0%
! AGAGTGCTCATCAAGGTTTG+AGG - chr4_3:54654154-54654173 None:intergenic 45.0%
!! AAATAATTAATGATAATAAA+AGG - chr4_3:54649492-54649511 None:intergenic 5.0%
!! AAAAAAAATATATATATCAT+TGG + chr4_3:54650547-54650566 Msa0648190:intron 5.0%
!!! TTTTAATTAAATTTTTATGT+CGG + chr4_3:54651992-54652011 Msa0648190:intron 5.0%
!! AATAAAATAAAATTAAGAAA+AGG + chr4_3:54652727-54652746 Msa0648190:intron 5.0%
!!! GTATTTTAATATTTAAATAA+CGG + chr4_3:54653044-54653063 Msa0648190:intron 5.0%
!! AAAATTACTAAAAATTATAA+AGG - chr4_3:54653111-54653130 None:intergenic 5.0%
!! AGGAGAAGCGTGGGTTGATA+GGG - chr4_3:54649338-54649357 None:intergenic 50.0%
CCCACGCTTCTCCTCTATTA+TGG + chr4_3:54649344-54649363 Msa0648190:CDS 50.0%
!! GTGCAAGCTGCATTGGTTGT+TGG - chr4_3:54649744-54649763 None:intergenic 50.0%
CCCCATAGACCTTTAGACTC+TGG - chr4_3:54650768-54650787 None:intergenic 50.0%
CACCATGACAAATGGACCTG+AGG + chr4_3:54651266-54651285 Msa0648190:CDS 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr4_3:54651389-54651408 Msa0648190:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr4_3:54651394-54651413 None:intergenic 50.0%
GCTTTCATGACGGCTGTGTT+TGG - chr4_3:54652929-54652948 None:intergenic 50.0%
GGAGATCTCCATAGCTGCTT+CGG - chr4_3:54653587-54653606 None:intergenic 50.0%
CAAGAGCCAGTGAGTCCTCA+TGG + chr4_3:54649204-54649223 Msa0648190:CDS 55.0%
!! GAGGAGAAGCGTGGGTTGAT+AGG - chr4_3:54649339-54649358 None:intergenic 55.0%
GTTGAGCATTACCACCGCTG+TGG - chr4_3:54650700-54650719 None:intergenic 55.0%
GCCGTCATGAAAGCTCCCTT+TGG + chr4_3:54652935-54652954 Msa0648190:intron 55.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 54649139 54654184 54649139 ID=Msa0648190;Name=Msa0648190
chr4_3 mRNA 54649139 54654184 54649139 ID=Msa0648190-mRNA-1;Parent=Msa0648190;Name=Msa0648190-mRNA-1;_AED=0.07;_eAED=0.07;_QI=41|1|1|1|1|1|5|557|474
chr4_3 exon 54649139 54649365 54649139 ID=Msa0648190-mRNA-1:exon:13827;Parent=Msa0648190-mRNA-1
chr4_3 exon 54649540 54650121 54649540 ID=Msa0648190-mRNA-1:exon:13828;Parent=Msa0648190-mRNA-1
chr4_3 exon 54650609 54650962 54650609 ID=Msa0648190-mRNA-1:exon:13829;Parent=Msa0648190-mRNA-1
chr4_3 exon 54651150 54651287 54651150 ID=Msa0648190-mRNA-1:exon:13830;Parent=Msa0648190-mRNA-1
chr4_3 exon 54653463 54654184 54653463 ID=Msa0648190-mRNA-1:exon:13831;Parent=Msa0648190-mRNA-1
chr4_3 five_prime_UTR 54649139 54649179 54649139 ID=Msa0648190-mRNA-1:five_prime_utr;Parent=Msa0648190-mRNA-1
chr4_3 CDS 54649180 54649365 54649180 ID=Msa0648190-mRNA-1:cds;Parent=Msa0648190-mRNA-1
chr4_3 CDS 54649540 54650121 54649540 ID=Msa0648190-mRNA-1:cds;Parent=Msa0648190-mRNA-1
chr4_3 CDS 54650609 54650962 54650609 ID=Msa0648190-mRNA-1:cds;Parent=Msa0648190-mRNA-1
chr4_3 CDS 54651150 54651287 54651150 ID=Msa0648190-mRNA-1:cds;Parent=Msa0648190-mRNA-1
chr4_3 CDS 54653463 54653627 54653463 ID=Msa0648190-mRNA-1:cds;Parent=Msa0648190-mRNA-1
chr4_3 three_prime_UTR 54653628 54654184 54653628 ID=Msa0648190-mRNA-1:three_prime_utr;Parent=Msa0648190-mRNA-1
Gene Sequence

>Msa0648190

ATGGACAAATTCTTTGGAGAAGTTCAAGAGCCAGTGAGTCCTCATGGACAATATTTCAACAGCTCTGTGATGTGTTCATATGTTTTTGGCTTTCTGGAATTAGCTATTCCATTTGATAATTCACTAGCCATACCTTTGCTCAAAGATGTCTTCATCCCTATCAACCCACGCTTCTCCTCTATTATGGTAAAAGACGAAGATGGTAAGATGAAATGGCAAAAGGTTGAAGTGAAGCCTGAAGAACACTTAAAGATTCCCATATTTCCTGAAACCATAAATTCATCATGTGAATTATATGACAAATATGTTAGTAACTATGTAACAAGTATTCTAAATGGAAGAACACCACAAAATAAACCACTTTGGGAAATTCATATTATCAATTATCCAACAACCAATGCAGCTTGCACCATAATATTCAAACTGAATCATGCACTTGGTGATGGTTACTCTCTCATGAGTGCTCTTCTTTCTTGTCTTCAAAGAGCTGATGATCCTTCTCTACCTCTGTCTTTTCCTTCACAAAGACCACAATTAGATTCAAAATATGCAAAGATAAACTTATTTGACAAGCTATGTTTTGTTATCTCATCCTTTTTTAGCTCCATATCAGATTTTGGATCAAGCATATTGAAGTCTAGAATGATTAAAGATGACAAAACACCTATAAGGTCAGGATATGAAGGTGCTGAATCTCAGCCTTTTATCTTGTCAAACATAACATTATCTCTTGATCAAATCAAAGGAGTTAAATCAAAGCTTGGAGTGACTATAAACGACGTGATTACGGGAATGATCTTCTATGGGATTAGGCTATACATGGAAGAGAAGAATGAGAAGACAAAAACATCAAATTCCACAGCGGTGGTAATGCTCAACACAAGAAATATTGGAGGTTACCAATCAGTGAAGGAAATGCAAAAACCAGAGTCTAAAGGTCTATGGGGGAATAAAATTTCTTTCTTACAAATACCTATACCTAAGATGAGCCAATCAAATATCTCCAACCCTCTTGAGTTTGTTTGGAATACTCGTGAACTAATCAAGAGGAAGAGACGTTCTTTCAGTGTTTATCTCATAGCTTTGCTCTTGGATTTGGAAATGAAGTTAAGAGGGTCTGAGGTGGTAGCTAAAATAATCTATAACACAACTGGGAACTCAAGTGTTCTTATGTCAAACATTGTAGGGCCAGTAGAGAAGATGACTTTGGCAAATCATCCAGTAAATGGATTGTGTTTCACCATGACAAATGGACCTGAGAATGTAAACATTACAATTATTAGCTACATGAATATATTAAGAATCACCTTGAAAACCTTAAAGGGATTCATAGATGAACAAAAATTGAAGTTCTGCATAGAGAAAGCAGTCGAAGTCATATCCGAAGCAGCTATGGAGATCTCCGAGATATCCACAAAAAATTAA

Protein sequence

>Msa0648190

MDKFFGEVQEPVSPHGQYFNSSVMCSYVFGFLELAIPFDNSLAIPLLKDVFIPINPRFSSIMVKDEDGKMKWQKVEVKPEEHLKIPIFPETINSSCELYDKYVSNYVTSILNGRTPQNKPLWEIHIINYPTTNAACTIIFKLNHALGDGYSLMSALLSCLQRADDPSLPLSFPSQRPQLDSKYAKINLFDKLCFVISSFFSSISDFGSSILKSRMIKDDKTPIRSGYEGAESQPFILSNITLSLDQIKGVKSKLGVTINDVITGMIFYGIRLYMEEKNEKTKTSNSTAVVMLNTRNIGGYQSVKEMQKPESKGLWGNKISFLQIPIPKMSQSNISNPLEFVWNTRELIKRKRRSFSVYLIALLLDLEMKLRGSEVVAKIIYNTTGNSSVLMSNIVGPVEKMTLANHPVNGLCFTMTNGPENVNITIISYMNILRITLKTLKGFIDEQKLKFCIEKAVEVISEAAMEISEISTKN*