Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0873950 | KAF3454360.1 | 65.574 | 183 | 36 | 3 | 295 | 455 | 147 | 324 | 1.80e-54 | 195 |
Msa0873950 | KAF3454360.1 | 78.547 | 289 | 27 | 3 | 1 | 257 | 15 | 300 | 1.21e-139 | 414 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0873950 | sp|Q43317|CYSK_CITLA | 74.394 | 289 | 39 | 3 | 1 | 257 | 15 | 300 | 3.97e-133 | 390 |
Msa0873950 | sp|Q43317|CYSK_CITLA | 66.467 | 167 | 36 | 1 | 309 | 455 | 158 | 324 | 5.43e-52 | 181 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0873950 | A0A2K3PLS0 | 58.416 | 202 | 50 | 3 | 274 | 455 | 137 | 324 | 3.75e-49 | 180 |
Msa0873950 | A0A2K3PLS0 | 86.063 | 287 | 9 | 2 | 1 | 257 | 15 | 300 | 4.65e-162 | 470 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0018610 | Msa0873950 | 0.805122 | 1.554684e-49 | -8.615850e-47 |
Msa0021240 | Msa0873950 | 0.801138 | 1.037093e-48 | -8.615850e-47 |
Msa0032990 | Msa0873950 | 0.808417 | 3.129137e-50 | -8.615850e-47 |
Msa0033190 | Msa0873950 | 0.811577 | 6.529855e-51 | -8.615850e-47 |
Msa0047400 | Msa0873950 | 0.800299 | 1.538070e-48 | -8.615850e-47 |
Msa0079840 | Msa0873950 | 0.813433 | 2.566658e-51 | -8.615850e-47 |
Msa0092390 | Msa0873950 | 0.809808 | 1.575992e-50 | -8.615850e-47 |
Msa0097470 | Msa0873950 | 0.818763 | 1.654178e-52 | -8.615850e-47 |
Msa0111000 | Msa0873950 | 0.802491 | 5.471518e-49 | -8.615850e-47 |
Msa0606380 | Msa0873950 | 0.817064 | 4.003065e-52 | -8.615850e-47 |
Msa0614020 | Msa0873950 | 0.817026 | 4.081919e-52 | -8.615850e-47 |
Msa0625900 | Msa0873950 | 0.820907 | 5.352770e-53 | -8.615850e-47 |
Msa0628440 | Msa0873950 | 0.802719 | 4.909674e-49 | -8.615850e-47 |
Msa0628840 | Msa0873950 | 0.801108 | 1.052107e-48 | -8.615850e-47 |
Msa0628900 | Msa0873950 | 0.832828 | 7.563883e-56 | -8.615850e-47 |
Msa0644610 | Msa0873950 | 0.818964 | 1.488837e-52 | -8.615850e-47 |
Msa0651000 | Msa0873950 | 0.800248 | 1.575746e-48 | -8.615850e-47 |
Msa0663690 | Msa0873950 | 0.819142 | 1.356432e-52 | -8.615850e-47 |
Msa0693050 | Msa0873950 | 0.804403 | 2.196895e-49 | -8.615850e-47 |
Msa0719160 | Msa0873950 | 0.807205 | 5.663259e-50 | -8.615850e-47 |
Msa0729740 | Msa0873950 | 0.803864 | 2.844318e-49 | -8.615850e-47 |
Msa0738460 | Msa0873950 | 0.807289 | 5.436633e-50 | -8.615850e-47 |
Msa0770050 | Msa0873950 | 0.828750 | 7.557000e-55 | -8.615850e-47 |
Msa0774360 | Msa0873950 | 0.805999 | 1.017882e-49 | -8.615850e-47 |
Msa0793530 | Msa0873950 | 0.803691 | 3.088919e-49 | -8.615850e-47 |
Msa0808500 | Msa0873950 | 0.814704 | 1.345031e-51 | -8.615850e-47 |
Msa0816860 | Msa0873950 | 0.845465 | 3.992939e-59 | -8.615850e-47 |
Msa0817880 | Msa0873950 | 0.808043 | 3.759902e-50 | -8.615850e-47 |
Msa0829250 | Msa0873950 | 0.806752 | 7.061910e-50 | -8.615850e-47 |
Msa0138800 | Msa0873950 | 0.804971 | 1.671989e-49 | -8.615850e-47 |
Msa0140870 | Msa0873950 | 0.802600 | 5.193734e-49 | -8.615850e-47 |
Msa0165820 | Msa0873950 | 0.801612 | 8.295172e-49 | -8.615850e-47 |
Msa0190400 | Msa0873950 | 0.800869 | 1.177312e-48 | -8.615850e-47 |
Msa0199160 | Msa0873950 | 0.829205 | 5.864249e-55 | -8.615850e-47 |
Msa0207150 | Msa0873950 | 0.868659 | 5.538374e-66 | -8.615850e-47 |
Msa0208710 | Msa0873950 | 0.800387 | 1.475791e-48 | -8.615850e-47 |
Msa0229350 | Msa0873950 | 0.818280 | 2.128170e-52 | -8.615850e-47 |
Msa0232170 | Msa0873950 | 0.815186 | 1.051836e-51 | -8.615850e-47 |
Msa0383110 | Msa0873950 | 0.800893 | 1.164170e-48 | -8.615850e-47 |
Msa0404900 | Msa0873950 | 0.821506 | 3.893727e-53 | -8.615850e-47 |
Msa0419950 | Msa0873950 | 0.809538 | 1.800880e-50 | -8.615850e-47 |
Msa0437820 | Msa0873950 | 0.801084 | 1.063881e-48 | -8.615850e-47 |
Msa0440220 | Msa0873950 | 0.836167 | 1.096671e-56 | -8.615850e-47 |
Msa0450920 | Msa0873950 | 0.817275 | 3.587538e-52 | -8.615850e-47 |
Msa0470080 | Msa0873950 | 0.825077 | 5.705706e-54 | -8.615850e-47 |
Msa0474220 | Msa0873950 | 0.802219 | 6.224508e-49 | -8.615850e-47 |
Msa0240630 | Msa0873950 | 0.845848 | 3.143405e-59 | -8.615850e-47 |
Msa0259450 | Msa0873950 | 0.804859 | 1.764672e-49 | -8.615850e-47 |
Msa0259570 | Msa0873950 | 0.803700 | 3.075948e-49 | -8.615850e-47 |
Msa0305630 | Msa0873950 | 0.801395 | 9.188121e-49 | -8.615850e-47 |
Msa0309670 | Msa0873950 | 0.807041 | 6.135227e-50 | -8.615850e-47 |
Msa0311130 | Msa0873950 | 0.805618 | 1.224016e-49 | -8.615850e-47 |
Msa0355630 | Msa0873950 | 0.816537 | 5.253961e-52 | -8.615850e-47 |
Msa0358750 | Msa0873950 | 0.807950 | 3.935296e-50 | -8.615850e-47 |
Msa0363090 | Msa0873950 | 0.805222 | 1.481797e-49 | -8.615850e-47 |
Msa0363180 | Msa0873950 | 0.813862 | 2.064621e-51 | -8.615850e-47 |
Msa0491160 | Msa0873950 | 0.830080 | 3.591869e-55 | -8.615850e-47 |
Msa0504640 | Msa0873950 | 0.818629 | 1.774373e-52 | -8.615850e-47 |
Msa0528830 | Msa0873950 | 0.802758 | 4.819404e-49 | -8.615850e-47 |
Msa0532750 | Msa0873950 | 0.821889 | 3.176275e-53 | -8.615850e-47 |
Msa0538050 | Msa0873950 | 0.805424 | 1.343701e-49 | -8.615850e-47 |
Msa0550760 | Msa0873950 | 0.852168 | 5.509548e-61 | -8.615850e-47 |
Msa0559280 | Msa0873950 | 0.811368 | 7.249632e-51 | -8.615850e-47 |
Msa0562680 | Msa0873950 | 0.804411 | 2.188635e-49 | -8.615850e-47 |
Msa0567190 | Msa0873950 | 0.816325 | 5.862104e-52 | -8.615850e-47 |
Msa0567420 | Msa0873950 | 0.812534 | 4.040315e-51 | -8.615850e-47 |
Msa0572730 | Msa0873950 | 0.822455 | 2.347793e-53 | -8.615850e-47 |
Msa0582270 | Msa0873950 | 0.810332 | 1.214744e-50 | -8.615850e-47 |
Msa0585720 | Msa0873950 | 0.809592 | 1.753282e-50 | -8.615850e-47 |
Msa0593160 | Msa0873950 | 0.821411 | 4.096455e-53 | -8.615850e-47 |
Msa0873950 | Msa0902810 | 0.814352 | 1.609560e-51 | -8.615850e-47 |
Msa0873950 | Msa0906180 | 0.831303 | 1.801979e-55 | -8.615850e-47 |
Msa0873950 | Msa0906840 | 0.844515 | 7.208792e-59 | -8.615850e-47 |
Msa0873950 | Msa0938150 | 0.825689 | 4.088496e-54 | -8.615850e-47 |
Msa0873950 | Msa0938190 | 0.805911 | 1.062276e-49 | -8.615850e-47 |
Msa0873950 | Msa0968060 | 0.806057 | 9.895897e-50 | -8.615850e-47 |
Msa0873950 | Msa0975440 | 0.832707 | 8.104945e-56 | -8.615850e-47 |
Msa0873950 | Msa0976000 | 0.859306 | 4.532804e-63 | -8.615850e-47 |
Msa0873950 | Msa1015020 | 0.820199 | 7.783075e-53 | -8.615850e-47 |
Msa0873950 | Msa1029010 | 0.807524 | 4.846287e-50 | -8.615850e-47 |
Msa0873950 | Msa1032760 | 0.832375 | 9.799762e-56 | -8.615850e-47 |
Msa0873950 | Msa1070710 | 0.806083 | 9.771354e-50 | -8.615850e-47 |
Msa0873950 | Msa1088000 | 0.803491 | 3.399662e-49 | -8.615850e-47 |
Msa0873950 | Msa1121290 | 0.801170 | 1.021825e-48 | -8.615850e-47 |
Msa0873950 | Msa1122710 | 0.813920 | 2.004751e-51 | -8.615850e-47 |
Msa0873950 | Msa1132250 | 0.802186 | 6.321824e-49 | -8.615850e-47 |
Msa0873950 | Msa1158540 | 0.820217 | 7.706021e-53 | -8.615850e-47 |
Msa0873950 | Msa1206510 | 0.814234 | 1.709490e-51 | -8.615850e-47 |
Msa0873950 | Msa1209990 | 0.816532 | 5.268258e-52 | -8.615850e-47 |
Msa0873950 | Msa1228600 | 0.814082 | 1.846010e-51 | -8.615850e-47 |
Msa0873950 | Msa1244380 | 0.800060 | 1.720504e-48 | -8.615850e-47 |
Msa0873950 | Msa1260640 | 0.804413 | 2.186298e-49 | -8.615850e-47 |
Msa0873950 | Msa1298170 | 0.802864 | 4.582959e-49 | -8.615850e-47 |
Msa0873950 | Msa1298480 | 0.817624 | 2.994634e-52 | -8.615850e-47 |
Msa0873950 | Msa1310620 | 0.802375 | 5.781100e-49 | -8.615850e-47 |
Msa0873950 | Msa1338600 | 0.806877 | 6.645315e-50 | -8.615850e-47 |
Msa0873950 | Msa1346220 | 0.829628 | 4.628853e-55 | -8.615850e-47 |
Msa0873950 | Msa1346340 | 0.810791 | 9.668221e-51 | -8.615850e-47 |
Msa0873950 | Msa1348180 | 0.820448 | 6.822174e-53 | -8.615850e-47 |
Msa0873950 | Msa1357090 | 0.820909 | 5.345631e-53 | -8.615850e-47 |
Msa0873950 | Msa1360070 | 0.811439 | 6.998542e-51 | -8.615850e-47 |
Msa0873950 | Msa1368150 | 0.805502 | 1.294508e-49 | -8.615850e-47 |
Msa0873950 | Msa1377980 | 0.824996 | 5.961380e-54 | -8.615850e-47 |
Msa0873950 | Msa1381340 | 0.800493 | 1.404338e-48 | -8.615850e-47 |
Msa0873950 | Msa1381830 | 0.811449 | 6.963363e-51 | -8.615850e-47 |
Msa0873950 | Msa1398150 | 0.811916 | 5.510159e-51 | -8.615850e-47 |
Msa0873950 | Msa1401640 | 0.816329 | 5.847975e-52 | -8.615850e-47 |
Msa0873950 | Msa1408280 | 0.824050 | 9.954327e-54 | -8.615850e-47 |
Msa0873950 | Msa1419620 | 0.802389 | 5.742403e-49 | -8.615850e-47 |
Msa0873950 | Msa1420590 | 0.816015 | 6.876637e-52 | -8.615850e-47 |
Msa0873950 | Msa1422770 | 0.802570 | 5.268824e-49 | -8.615850e-47 |
Msa0873950 | Msa1424250 | 0.812586 | 3.934937e-51 | -8.615850e-47 |
Msa0873950 | Msa1425530 | 0.817016 | 4.103250e-52 | -8.615850e-47 |
Msa0873950 | Msa1440990 | 0.800769 | 1.233723e-48 | -8.615850e-47 |
Msa0873950 | Msa1444070 | 0.824258 | 8.896517e-54 | -8.615850e-47 |
Msa0873950 | Msa1459680 | 0.813673 | 2.272227e-51 | -8.615850e-47 |
Msa0873950 | Msa1462210 | 0.812421 | 4.275660e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0873950 | MtrunA17_Chr1g0191041 | 86.063 | 287 | 9 | 2 | 1 | 257 | 15 | 300 | 3.59e-164 | 466 |
Msa0873950 | MtrunA17_Chr1g0191041 | 57.921 | 202 | 51 | 3 | 274 | 455 | 137 | 324 | 1.26e-51 | 177 |
Msa0873950 | MtrunA17_Chr5g0394491 | 75.261 | 287 | 40 | 4 | 1 | 257 | 15 | 300 | 1.33e-131 | 383 |
Msa0873950 | MtrunA17_Chr5g0394491 | 58.416 | 202 | 50 | 3 | 274 | 455 | 137 | 324 | 4.54e-51 | 176 |
Msa0873950 | MtrunA17_Chr1g0205381 | 73.868 | 287 | 44 | 3 | 1 | 257 | 15 | 300 | 1.13e-129 | 378 |
Msa0873950 | MtrunA17_Chr1g0205381 | 67.066 | 167 | 35 | 1 | 309 | 455 | 158 | 324 | 8.02e-53 | 180 |
Msa0873950 | MtrunA17_Chr4g0045721 | 64.111 | 287 | 72 | 2 | 1 | 257 | 54 | 339 | 1.36e-122 | 361 |
Msa0873950 | MtrunA17_Chr4g0045721 | 50.251 | 199 | 65 | 3 | 274 | 452 | 176 | 360 | 1.32e-56 | 191 |
Msa0873950 | MtrunA17_Chr1g0191051 | 64.808 | 287 | 70 | 3 | 1 | 257 | 14 | 299 | 7.62e-117 | 345 |
Msa0873950 | MtrunA17_Chr1g0191051 | 65.842 | 202 | 35 | 3 | 274 | 455 | 136 | 323 | 3.99e-74 | 236 |
Msa0873950 | MtrunA17_Chr1g0191051 | 46.721 | 122 | 37 | 3 | 262 | 360 | 1 | 117 | 1.05e-18 | 87.0 |
Msa0873950 | MtrunA17_Chr4g0045781 | 63.668 | 289 | 70 | 3 | 1 | 257 | 73 | 358 | 2.02e-112 | 336 |
Msa0873950 | MtrunA17_Chr4g0045781 | 60.976 | 164 | 44 | 1 | 309 | 452 | 216 | 379 | 1.11e-43 | 157 |
Msa0873950 | MtrunA17_Chr4g0045771 | 57.525 | 299 | 88 | 3 | 2 | 270 | 54 | 343 | 1.00e-111 | 333 |
Msa0873950 | MtrunA17_Chr4g0045771 | 47.087 | 206 | 66 | 5 | 267 | 452 | 169 | 351 | 1.19e-50 | 175 |
Msa0873950 | MtrunA17_Chr7g0254401 | 58.845 | 277 | 93 | 2 | 1 | 257 | 72 | 347 | 6.08e-104 | 314 |
Msa0873950 | MtrunA17_Chr7g0254401 | 51.220 | 164 | 50 | 2 | 309 | 452 | 215 | 368 | 8.57e-33 | 127 |
Msa0873950 | MtrunA17_Chr1g0191061 | 53.116 | 337 | 79 | 4 | 1 | 260 | 28 | 362 | 1.13e-103 | 314 |
Msa0873950 | MtrunA17_Chr1g0191061 | 65.534 | 206 | 39 | 4 | 282 | 455 | 178 | 383 | 4.17e-64 | 211 |
Msa0873950 | MtrunA17_Chr7g0248021 | 53.191 | 282 | 101 | 3 | 1 | 252 | 68 | 348 | 4.78e-95 | 291 |
Msa0873950 | MtrunA17_Chr7g0248021 | 48.128 | 187 | 71 | 3 | 292 | 452 | 188 | 374 | 2.06e-44 | 159 |
Msa0873950 | MtrunA17_Chr1g0191071 | 56.400 | 250 | 73 | 3 | 43 | 258 | 1 | 248 | 1.61e-78 | 245 |
Msa0873950 | MtrunA17_Chr1g0191071 | 65.842 | 202 | 30 | 4 | 274 | 455 | 82 | 264 | 1.23e-62 | 204 |
Msa0873950 | MtrunA17_Chr5g0446431 | 25.610 | 328 | 155 | 5 | 2 | 242 | 52 | 377 | 5.47e-24 | 103 |
Msa0873950 | MtrunA17_Chr5g0446431 | 51.667 | 60 | 29 | 0 | 309 | 368 | 233 | 292 | 1.73e-14 | 75.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0873950 | AT4G14880.5 | 68.166 | 289 | 57 | 3 | 1 | 257 | 12 | 297 | 1.37e-124 | 365 |
Msa0873950 | AT4G14880.5 | 60.870 | 184 | 45 | 3 | 295 | 456 | 144 | 322 | 5.49e-53 | 181 |
Msa0873950 | AT4G14880.3 | 68.166 | 289 | 57 | 3 | 1 | 257 | 12 | 297 | 1.37e-124 | 365 |
Msa0873950 | AT4G14880.3 | 60.870 | 184 | 45 | 3 | 295 | 456 | 144 | 322 | 5.49e-53 | 181 |
Msa0873950 | AT4G14880.4 | 68.166 | 289 | 57 | 3 | 1 | 257 | 12 | 297 | 1.37e-124 | 365 |
Msa0873950 | AT4G14880.4 | 60.870 | 184 | 45 | 3 | 295 | 456 | 144 | 322 | 5.49e-53 | 181 |
Msa0873950 | AT4G14880.2 | 68.166 | 289 | 57 | 3 | 1 | 257 | 12 | 297 | 1.37e-124 | 365 |
Msa0873950 | AT4G14880.2 | 60.870 | 184 | 45 | 3 | 295 | 456 | 144 | 322 | 5.49e-53 | 181 |
Msa0873950 | AT4G14880.1 | 68.166 | 289 | 57 | 3 | 1 | 257 | 12 | 297 | 1.37e-124 | 365 |
Msa0873950 | AT4G14880.1 | 60.870 | 184 | 45 | 3 | 295 | 456 | 144 | 322 | 5.49e-53 | 181 |
Msa0873950 | AT2G43750.1 | 66.782 | 289 | 61 | 3 | 1 | 257 | 82 | 367 | 5.98e-120 | 356 |
Msa0873950 | AT2G43750.1 | 65.244 | 164 | 37 | 1 | 309 | 452 | 225 | 388 | 4.97e-49 | 172 |
Msa0873950 | AT2G43750.2 | 66.782 | 289 | 61 | 3 | 1 | 257 | 82 | 367 | 5.98e-120 | 356 |
Msa0873950 | AT2G43750.2 | 65.244 | 164 | 37 | 1 | 309 | 452 | 225 | 388 | 4.97e-49 | 172 |
Msa0873950 | AT3G59760.2 | 64.966 | 294 | 68 | 3 | 1 | 262 | 120 | 410 | 3.56e-119 | 355 |
Msa0873950 | AT3G59760.2 | 48.958 | 192 | 63 | 4 | 274 | 445 | 242 | 418 | 9.10e-32 | 126 |
Msa0873950 | AT3G59760.1 | 66.090 | 289 | 63 | 3 | 1 | 257 | 120 | 405 | 8.21e-119 | 355 |
Msa0873950 | AT3G59760.1 | 55.276 | 199 | 55 | 3 | 274 | 452 | 242 | 426 | 3.07e-48 | 171 |
Msa0873950 | AT3G59760.3 | 66.090 | 289 | 63 | 3 | 1 | 257 | 120 | 405 | 1.23e-118 | 354 |
Msa0873950 | AT3G59760.3 | 55.276 | 199 | 55 | 3 | 274 | 452 | 242 | 426 | 3.27e-48 | 171 |
Msa0873950 | AT3G04940.1 | 63.066 | 287 | 75 | 3 | 1 | 257 | 15 | 300 | 3.96e-111 | 331 |
Msa0873950 | AT3G04940.1 | 64.024 | 164 | 39 | 1 | 309 | 452 | 158 | 321 | 5.97e-55 | 186 |
Msa0873950 | AT3G04940.2 | 63.066 | 287 | 75 | 3 | 1 | 257 | 15 | 300 | 3.96e-111 | 331 |
Msa0873950 | AT3G04940.2 | 64.024 | 164 | 39 | 1 | 309 | 452 | 158 | 321 | 5.97e-55 | 186 |
Msa0873950 | AT5G28020.2 | 62.630 | 289 | 73 | 3 | 1 | 257 | 14 | 299 | 2.76e-109 | 326 |
Msa0873950 | AT5G28020.2 | 61.818 | 165 | 43 | 1 | 311 | 455 | 159 | 323 | 1.59e-46 | 164 |
Msa0873950 | AT5G28020.4 | 62.630 | 289 | 73 | 3 | 1 | 257 | 14 | 299 | 2.76e-109 | 326 |
Msa0873950 | AT5G28020.4 | 61.818 | 165 | 43 | 1 | 311 | 455 | 159 | 323 | 1.59e-46 | 164 |
Msa0873950 | AT5G28020.1 | 62.630 | 289 | 73 | 3 | 1 | 257 | 14 | 299 | 2.76e-109 | 326 |
Msa0873950 | AT5G28020.1 | 61.818 | 165 | 43 | 1 | 311 | 455 | 159 | 323 | 1.59e-46 | 164 |
Msa0873950 | AT5G28020.3 | 62.630 | 289 | 73 | 3 | 1 | 257 | 14 | 299 | 2.76e-109 | 326 |
Msa0873950 | AT5G28020.3 | 61.818 | 165 | 43 | 1 | 311 | 455 | 159 | 323 | 1.59e-46 | 164 |
Msa0873950 | AT5G28020.6 | 62.630 | 289 | 73 | 3 | 1 | 257 | 14 | 299 | 2.76e-109 | 326 |
Msa0873950 | AT5G28020.6 | 61.818 | 165 | 43 | 1 | 311 | 455 | 159 | 323 | 1.59e-46 | 164 |
Msa0873950 | AT3G22460.2 | 84.000 | 175 | 27 | 1 | 1 | 175 | 15 | 188 | 1.38e-101 | 301 |
Msa0873950 | AT5G28030.1 | 59.170 | 289 | 83 | 3 | 1 | 257 | 14 | 299 | 3.31e-101 | 306 |
Msa0873950 | AT5G28030.1 | 60.606 | 165 | 45 | 1 | 311 | 455 | 159 | 323 | 6.30e-46 | 162 |
Msa0873950 | AT5G28030.4 | 59.170 | 289 | 83 | 3 | 1 | 257 | 14 | 299 | 3.31e-101 | 306 |
Msa0873950 | AT5G28030.4 | 60.606 | 165 | 45 | 1 | 311 | 455 | 159 | 323 | 6.30e-46 | 162 |
Msa0873950 | AT5G28030.5 | 59.170 | 289 | 83 | 3 | 1 | 257 | 14 | 299 | 3.31e-101 | 306 |
Msa0873950 | AT5G28030.5 | 60.606 | 165 | 45 | 1 | 311 | 455 | 159 | 323 | 6.30e-46 | 162 |
Msa0873950 | AT5G28030.2 | 59.170 | 289 | 83 | 3 | 1 | 257 | 14 | 299 | 3.31e-101 | 306 |
Msa0873950 | AT5G28030.2 | 60.606 | 165 | 45 | 1 | 311 | 455 | 159 | 323 | 6.30e-46 | 162 |
Msa0873950 | AT3G03630.1 | 58.484 | 277 | 94 | 2 | 1 | 257 | 106 | 381 | 1.03e-100 | 307 |
Msa0873950 | AT3G03630.1 | 51.205 | 166 | 51 | 2 | 309 | 454 | 249 | 404 | 3.28e-33 | 130 |
Msa0873950 | AT3G22460.1 | 71.806 | 227 | 50 | 2 | 43 | 257 | 1 | 225 | 1.16e-100 | 301 |
Msa0873950 | AT3G22460.1 | 51.042 | 192 | 48 | 3 | 284 | 455 | 84 | 249 | 3.38e-49 | 169 |
Msa0873950 | AT3G61440.1 | 53.191 | 282 | 101 | 3 | 1 | 252 | 56 | 336 | 8.79e-91 | 280 |
Msa0873950 | AT3G61440.1 | 52.381 | 168 | 58 | 2 | 307 | 452 | 195 | 362 | 1.14e-43 | 157 |
Msa0873950 | AT5G28030.3 | 56.723 | 238 | 72 | 3 | 1 | 208 | 14 | 250 | 4.81e-80 | 249 |
Msa0873950 | AT5G28030.3 | 68.889 | 90 | 28 | 0 | 311 | 400 | 159 | 248 | 4.85e-29 | 115 |
Msa0873950 | AT3G61440.4 | 50.775 | 258 | 96 | 3 | 1 | 228 | 56 | 312 | 2.51e-78 | 247 |
Msa0873950 | AT3G61440.4 | 50.877 | 114 | 52 | 2 | 307 | 418 | 195 | 306 | 2.07e-24 | 103 |
Msa0873950 | AT3G61440.2 | 52.917 | 240 | 83 | 2 | 43 | 252 | 1 | 240 | 4.82e-75 | 236 |
Msa0873950 | AT3G61440.2 | 52.381 | 168 | 58 | 2 | 307 | 452 | 99 | 266 | 1.37e-44 | 157 |
Msa0873950 | AT5G28020.5 | 55.708 | 219 | 63 | 2 | 75 | 261 | 1 | 217 | 1.27e-65 | 211 |
Msa0873950 | AT5G28020.5 | 61.818 | 165 | 43 | 1 | 311 | 455 | 73 | 237 | 4.72e-47 | 162 |
Msa0873950 | AT3G61440.3 | 51.402 | 214 | 74 | 2 | 69 | 252 | 2 | 215 | 2.65e-63 | 205 |
Msa0873950 | AT3G61440.3 | 52.071 | 169 | 59 | 2 | 306 | 452 | 73 | 241 | 7.27e-45 | 157 |
Msa0873950 | AT1G55880.1 | 25.532 | 329 | 155 | 5 | 2 | 242 | 48 | 374 | 1.15e-22 | 100 |
Msa0873950 | AT1G55880.1 | 38.202 | 89 | 49 | 1 | 280 | 368 | 207 | 289 | 1.25e-13 | 73.2 |
Msa0873950 | AT1G55880.2 | 29.464 | 224 | 115 | 4 | 2 | 184 | 48 | 269 | 1.19e-21 | 96.3 |
Msa0873950 | AT1G55880.2 | 38.202 | 89 | 49 | 1 | 280 | 368 | 207 | 289 | 1.03e-13 | 72.8 |
Find 125 sgRNAs with CRISPR-Local
Find 526 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATTCATTGTGAAGTTAAT+AGG | 0.176383 | 6_1:+9587075 | Msa0873950:intron |
AAAGTTGATGCCCTTGTTTC+TGG | 0.184437 | 6_1:+9583919 | Msa0873950:CDS |
TTTCTAGCTTTGCAGCAATT+TGG | 0.202517 | 6_1:-9581522 | None:intergenic |
TTACTCTTGCGGAGAAAATT+TGG | 0.221125 | 6_1:-9589843 | None:intergenic |
TGCCGCAGCCGCTGCAATTA+AGG | 0.271826 | 6_1:+9585122 | Msa0873950:CDS |
TGGCTTCATTCCTGGTGTTC+TGG | 0.280161 | 6_1:+9584538 | Msa0873950:CDS |
ACTAACACCTTTGGGTTTGC+AGG | 0.288673 | 6_1:-9583771 | None:intergenic |
AATCAGTAATATACCTTTGC+AGG | 0.289736 | 6_1:-9587361 | None:intergenic |
TTGGTTGCAGGGATAGGAAC+TGG | 0.301174 | 6_1:+9588058 | Msa0873950:CDS |
AGACCACTGGCCCTGAGATT+TGG | 0.302016 | 6_1:+9588008 | Msa0873950:CDS |
TTCTAGCTTTGCAGCAATTT+GGG | 0.302447 | 6_1:-9581521 | None:intergenic |
ATTGGTGCTGGCTTCATTCC+TGG | 0.308145 | 6_1:+9584530 | Msa0873950:CDS |
TCTCCTAGATGAAGTTATTC+AGG | 0.311315 | 6_1:+9588520 | Msa0873950:CDS |
AGAATTGATGCTTTGGTTGC+AGG | 0.319930 | 6_1:+9588046 | Msa0873950:CDS |
TGCATTAAAAGAAGGTTTGC+TGG | 0.326558 | 6_1:+9584996 | Msa0873950:CDS |
GAATGAACCATTACGTTTAA+CGG | 0.330116 | 6_1:+9589767 | Msa0873950:three_prime_UTR |
AACGTTTGGACTTTGGAGTT+TGG | 0.331648 | 6_1:+9589705 | Msa0873950:three_prime_UTR |
TGGTATTGGTTTGGCATTCA+TGG | 0.343061 | 6_1:+9583554 | Msa0873950:CDS |
GATGCCCTTGTTTCTGGTAT+AGG | 0.346426 | 6_1:+9583925 | Msa0873950:CDS |
CCATTACGTTTAACGGTGAT+TGG | 0.348990 | 6_1:+9589774 | Msa0873950:three_prime_UTR |
ACTTTGTGAATGACAACGTT+TGG | 0.355206 | 6_1:+9589691 | Msa0873950:three_prime_UTR |
AGAACTATTCTCCGTGCTTT+CGG | 0.359324 | 6_1:+9583636 | Msa0873950:CDS |
AGAAGGAAAACTAACTTCTT+GGG | 0.376619 | 6_1:-9583259 | None:intergenic |
CCAGTGTCTCTCCAAATCTC+AGG | 0.381632 | 6_1:-9588019 | None:intergenic |
GGCATTCATGGCAGCTGCTA+AGG | 0.385377 | 6_1:+9583566 | Msa0873950:CDS |
AATTCATTGTGAAGTTAATA+GGG | 0.388493 | 6_1:+9587076 | Msa0873950:intron |
AACCTTAATTGCAGCGGCTG+CGG | 0.402776 | 6_1:-9585124 | None:intergenic |
ATTGAAGATGCCGAAAATAA+AGG | 0.410624 | 6_1:+9587328 | Msa0873950:CDS |
GCTCCTTTCATGCCTTTAGC+TGG | 0.412522 | 6_1:-9583681 | None:intergenic |
CTTGTTTCTGGTATAGGAAC+CGG | 0.413375 | 6_1:+9583931 | Msa0873950:CDS |
TAGGTTCACTGTGAAACTAC+TGG | 0.414969 | 6_1:+9583868 | Msa0873950:intron |
AAACTTCTTGCATTAAAAGA+AGG | 0.415012 | 6_1:+9584988 | Msa0873950:CDS |
TTGCAGATGGGAATTTCATC+AGG | 0.417954 | 6_1:+9589274 | Msa0873950:intron |
TTCTTCAGCTTCACGCCTGA+TGG | 0.420313 | 6_1:-9589570 | None:intergenic |
TGGAGGGAGAATTGATGCTT+TGG | 0.420775 | 6_1:+9588039 | Msa0873950:CDS |
GGAACCGGAGGTACAGTAAC+AGG | 0.421160 | 6_1:+9583946 | Msa0873950:CDS |
AAACTACTGGACCAGAGATC+TGG | 0.436235 | 6_1:+9583881 | Msa0873950:CDS |
TGCTGAAGAATGTAAGCATT+GGG | 0.439335 | 6_1:-9583738 | None:intergenic |
ACTAGTGGAAACACTGGTAT+TGG | 0.441486 | 6_1:+9583540 | Msa0873950:CDS |
TGCTGCAAAGCTAGAAATGA+TGG | 0.443156 | 6_1:+9581528 | Msa0873950:CDS |
TGGAAACACTGGTATTGGTT+TGG | 0.446534 | 6_1:+9583545 | Msa0873950:CDS |
CCTCATAAGATCCAAGGAAT+TGG | 0.451628 | 6_1:+9584512 | Msa0873950:intron |
TTGGTCACTAAGAACTTGTT+AGG | 0.457284 | 6_1:+9589793 | Msa0873950:three_prime_UTR |
GAATTGATGCTTTGGTTGCA+GGG | 0.460383 | 6_1:+9588047 | Msa0873950:CDS |
TGAAGCCAGCACCAATTCCT+TGG | 0.469310 | 6_1:-9584523 | None:intergenic |
TTCAAAATTGCACTTTCAGT+TGG | 0.477799 | 6_1:-9588268 | None:intergenic |
TTGCAGGTGGGGATATCATC+TGG | 0.479973 | 6_1:+9585096 | Msa0873950:intron |
GCAAAGAAGCCGGAAAATGC+TGG | 0.483242 | 6_1:+9585147 | Msa0873950:CDS |
CGACACCATTACCGATACCT+TGG | 0.483706 | 6_1:-9588475 | None:intergenic |
TGGTTGCAGGGATAGGAACT+GGG | 0.484341 | 6_1:+9588059 | Msa0873950:CDS |
GCAACACTTTGCAATTAAGA+AGG | 0.485120 | 6_1:+9586902 | Msa0873950:CDS |
GAATGACAACGTTTGGACTT+TGG | 0.485395 | 6_1:+9589698 | Msa0873950:three_prime_UTR |
CGATACCTTGGATTAGATGT+TGG | 0.489232 | 6_1:-9588463 | None:intergenic |
CATCTAGGAGATCAAGATCC+AGG | 0.490366 | 6_1:-9588508 | None:intergenic |
CTACCTGAATAACTTCATCT+AGG | 0.491918 | 6_1:-9588523 | None:intergenic |
CTCTCAAGACTCATTGAAGC+AGG | 0.492620 | 6_1:-9583612 | None:intergenic |
GGAGAGAAACTTAGATATGA+AGG | 0.493613 | 6_1:+9588114 | Msa0873950:CDS |
AGCACCTGTTACTGTACCTC+CGG | 0.496232 | 6_1:-9583950 | None:intergenic |
CTAATCCAAGGTATCGGTAA+TGG | 0.499930 | 6_1:+9588470 | Msa0873950:CDS |
CCAGAGATCTGGAAAAGCTC+TGG | 0.501405 | 6_1:+9583892 | Msa0873950:CDS |
GATGCTTTGGTTGCAGGGAT+AGG | 0.501960 | 6_1:+9588052 | Msa0873950:CDS |
GCAGCAGCTGCAATAAAACT+AGG | 0.508019 | 6_1:+9589304 | Msa0873950:CDS |
ATTGCAGATGCTGAGGAGAA+AGG | 0.508023 | 6_1:+9583225 | Msa0873950:CDS |
AGTTTCAATAGCTTCTTCGC+TGG | 0.508262 | 6_1:-9584962 | None:intergenic |
TTGCTGAAGAATGTAAGCAT+TGG | 0.512878 | 6_1:-9583739 | None:intergenic |
AGTAACAGGTGCTGGAAACC+TGG | 0.514080 | 6_1:+9583960 | Msa0873950:CDS |
AAGTAACGCTCTCCAAAACT+AGG | 0.515786 | 6_1:-9589527 | None:intergenic |
CCTTTCTTCATCAGATAACA+TGG | 0.518210 | 6_1:+9586878 | Msa0873950:CDS |
CCAATCACCGTTAAACGTAA+TGG | 0.527938 | 6_1:-9589774 | None:intergenic |
GGAGGTACAGTAACAGGTGC+TGG | 0.531723 | 6_1:+9583952 | Msa0873950:CDS |
TAGACTCATTATGAGACCAC+TGG | 0.531764 | 6_1:+9587995 | Msa0873950:intron |
GTTCTCACAGATCCAGCTAA+AGG | 0.537240 | 6_1:+9583669 | Msa0873950:CDS |
GAGATCTGGAAAAGCTCTGG+TGG | 0.541486 | 6_1:+9583895 | Msa0873950:CDS |
CGGTTCCTATACCAGAAACA+AGG | 0.542856 | 6_1:-9583930 | None:intergenic |
GCATTCATGGCAGCTGCTAA+GGG | 0.547831 | 6_1:+9583567 | Msa0873950:CDS |
AGGAGATCAAGATCCAGGAC+AGG | 0.551186 | 6_1:-9588503 | None:intergenic |
ATACCAGTGTTTCCACTAGT+AGG | 0.551210 | 6_1:-9583537 | None:intergenic |
AAGATCCAAGGAATTGGTGC+TGG | 0.553335 | 6_1:+9584518 | Msa0873950:intron |
CTTTGCAACCTTAATTGCAG+CGG | 0.555528 | 6_1:-9585130 | None:intergenic |
TCTCCAAATCTCAGGGCCAG+TGG | 0.561794 | 6_1:-9588011 | None:intergenic |
TATCTTAACAACATTACAGA+AGG | 0.565102 | 6_1:+9587114 | Msa0873950:CDS |
TATCTAAGTTTCTCTCCTTG+AGG | 0.566238 | 6_1:-9588108 | None:intergenic |
ATTCAAAATTCATGTCTGCA+TGG | 0.568883 | 6_1:-9589748 | None:intergenic |
CCATGTTATCTGATGAAGAA+AGG | 0.572162 | 6_1:-9586878 | None:intergenic |
CTTGCTCTAGTGTCAAAGAC+AGG | 0.573863 | 6_1:+9581554 | Msa0873950:CDS |
GGGAAGAGACAAGAAAATGC+AGG | 0.574537 | 6_1:+9589325 | Msa0873950:CDS |
GATCCAGCTAAAGGCATGAA+AGG | 0.577143 | 6_1:+9583678 | Msa0873950:CDS |
CTAACTCAGCACCGAAAGCA+CGG | 0.577262 | 6_1:-9583647 | None:intergenic |
GTCCTCATTGAGCCTACTAG+TGG | 0.580307 | 6_1:+9583525 | Msa0873950:CDS |
CAGCAGCTGCAATAAAACTA+GGG | 0.584186 | 6_1:+9589305 | Msa0873950:CDS |
GAAGGAAAACTAACTTCTTG+GGG | 0.586335 | 6_1:-9583258 | None:intergenic |
AAAGGCCAACATCTAATCCA+AGG | 0.588362 | 6_1:+9588458 | Msa0873950:intron |
AATTAAGGTTGCAAAGAAGC+CGG | 0.588483 | 6_1:+9585137 | Msa0873950:CDS |
AGTATATCTCAACCATGTTG+TGG | 0.590226 | 6_1:+9581486 | Msa0873950:CDS |
CAGTGTCTCTCCAAATCTCA+GGG | 0.596061 | 6_1:-9588018 | None:intergenic |
CCTGAGATTTGGAGAGACAC+TGG | 0.596193 | 6_1:+9588019 | Msa0873950:CDS |
AAATCGACATCCAGAACACC+AGG | 0.597252 | 6_1:-9584548 | None:intergenic |
GTTAATAGGGAACACACCAT+TGG | 0.598353 | 6_1:+9587089 | Msa0873950:intron |
CAAGGCCCTCATAAGATCCA+AGG | 0.600003 | 6_1:+9584506 | Msa0873950:intron |
AAGACTCATTGAAGCAGGCA+TGG | 0.602785 | 6_1:-9583607 | None:intergenic |
CAACATCTAATCCAAGGTAT+CGG | 0.603205 | 6_1:+9588464 | Msa0873950:CDS |
AGGTCTCATTACTCCTGCAA+AGG | 0.603893 | 6_1:+9587348 | Msa0873950:CDS |
CATGATTATTGCAGATGCTG+AGG | 0.604545 | 6_1:+9583218 | Msa0873950:CDS |
GGGGAACAATAACAGGTGCT+GGG | 0.617812 | 6_1:+9588080 | Msa0873950:CDS |
AGTCATTCTCATTCAAGCTG+TGG | 0.622200 | 6_1:+9589636 | Msa0873950:three_prime_UTR |
AGATCTGGAAAAGCTCTGGT+GGG | 0.624158 | 6_1:+9583896 | Msa0873950:CDS |
GGAGATCAAGATCCAGGACA+GGG | 0.624998 | 6_1:-9588502 | None:intergenic |
GAGCCTACTAGTGGAAACAC+TGG | 0.626296 | 6_1:+9583534 | Msa0873950:CDS |
TGAAAATCCTGCAAACCCAA+AGG | 0.632579 | 6_1:+9583764 | Msa0873950:CDS |
TATCTCAACCATGTTGTGGA+TGG | 0.638770 | 6_1:+9581490 | Msa0873950:CDS |
CTGTCTTTGACACTAGAGCA+AGG | 0.647667 | 6_1:-9581553 | None:intergenic |
AGATTTGGAGAGACACTGGA+GGG | 0.656101 | 6_1:+9588023 | Msa0873950:CDS |
AAACACAGCCATCCACAACA+TGG | 0.659606 | 6_1:-9581498 | None:intergenic |
AGATCAAGATCCAGGACAGG+GGG | 0.659611 | 6_1:-9588500 | None:intergenic |
GAGATTTGGAGAGACACTGG+AGG | 0.660104 | 6_1:+9588022 | Msa0873950:CDS |
AGGTGCTGGGAAGTTCCTCA+AGG | 0.662577 | 6_1:+9588093 | Msa0873950:CDS |
ATCTTAACAACATTACAGAA+GGG | 0.672585 | 6_1:+9587115 | Msa0873950:CDS |
GGTTGCAGGGATAGGAACTG+GGG | 0.673121 | 6_1:+9588060 | Msa0873950:CDS |
GAGATCAAGATCCAGGACAG+GGG | 0.676210 | 6_1:-9588501 | None:intergenic |
GTTTCTGGTATAGGAACCGG+AGG | 0.680508 | 6_1:+9583934 | Msa0873950:CDS |
TTCCACTAGTAGGCTCAATG+AGG | 0.683327 | 6_1:-9583527 | None:intergenic |
ACATGGTTGAGATATACTAG+TGG | 0.684632 | 6_1:-9581481 | None:intergenic |
GGTTCCTATACCAGAAACAA+GGG | 0.692573 | 6_1:-9583929 | None:intergenic |
GTTGCAGGGATAGGAACTGG+GGG | 0.729118 | 6_1:+9588061 | Msa0873950:CDS |
ATGTTGTTAAGATATACCAA+TGG | 0.736447 | 6_1:-9587105 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAGTTATATGAAAATTATT+TGG | + | chr6_1:9582816-9582835 | Msa0873950:intron | 10.0% |
!!! | TTTTTAACAAAAAAAAATAG+TGG | + | chr6_1:9582995-9583014 | Msa0873950:intron | 10.0% |
!! | AATAGTAATAAATAATAAGA+AGG | - | chr6_1:9583994-9584013 | None:intergenic | 10.0% |
!! | ACTTAAAATTTATTATTGAA+GGG | - | chr6_1:9584673-9584692 | None:intergenic | 10.0% |
!! | TACTTAAAATTTATTATTGA+AGG | - | chr6_1:9584674-9584693 | None:intergenic | 10.0% |
!!! | AATTTTAAGTAAAATAAAGT+AGG | + | chr6_1:9584683-9584702 | Msa0873950:intron | 10.0% |
!!! | ATTTTAAGTAAAATAAAGTA+GGG | + | chr6_1:9584684-9584703 | Msa0873950:intron | 10.0% |
!!! | ATCAACTATTATTTTATTTT+AGG | + | chr6_1:9585685-9585704 | Msa0873950:intron | 10.0% |
!! | AAAAAAATTTAAAAACAATC+AGG | - | chr6_1:9586138-9586157 | None:intergenic | 10.0% |
!!! | TGATTGTTTTTAAATTTTTT+TGG | + | chr6_1:9586137-9586156 | Msa0873950:intron | 10.0% |
!!! | TTTTTGAAAAATATAGATTT+TGG | + | chr6_1:9586275-9586294 | Msa0873950:intron | 10.0% |
!!! | TTTTGAAAAATATAGATTTT+GGG | + | chr6_1:9586276-9586295 | Msa0873950:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTTGGTA+AGG | - | chr6_1:9586564-9586583 | None:intergenic | 10.0% |
!! | ATATCTATCAAAAAAATTCT+CGG | - | chr6_1:9581602-9581621 | None:intergenic | 15.0% |
!! | TAATATTATTTAATTACAGG+TGG | + | chr6_1:9582519-9582538 | Msa0873950:intron | 15.0% |
!!! | TTTTTGAATTATTTAATTGC+TGG | + | chr6_1:9582747-9582766 | Msa0873950:intron | 15.0% |
!!! | TTTTGAATTATTTAATTGCT+GGG | + | chr6_1:9582748-9582767 | Msa0873950:intron | 15.0% |
!! | ATGTGTATTATTTATTAAAG+TGG | - | chr6_1:9582861-9582880 | None:intergenic | 15.0% |
!!! | AAATAATACACTTTGATTTA+TGG | + | chr6_1:9582889-9582908 | Msa0873950:intron | 15.0% |
!!! | AAATTTTAAATCGTTTACTT+AGG | + | chr6_1:9583414-9583433 | Msa0873950:intron | 15.0% |
!!! | TTTTAAGTAAAATAAAGTAG+GGG | + | chr6_1:9584685-9584704 | Msa0873950:intron | 15.0% |
!! | TAATAGATTATACAGATATT+CGG | - | chr6_1:9584881-9584900 | None:intergenic | 15.0% |
!!! | TTCAGTTTTATAATTAGTTT+AGG | + | chr6_1:9585796-9585815 | Msa0873950:intron | 15.0% |
!!! | TCAGTTTTATAATTAGTTTA+GGG | + | chr6_1:9585797-9585816 | Msa0873950:intron | 15.0% |
!!! | ACTTTAAAAAGAAAAACTAT+TGG | - | chr6_1:9586312-9586331 | None:intergenic | 15.0% |
!!! | TTTACCAAAATTTTTAACAT+TGG | + | chr6_1:9586361-9586380 | Msa0873950:intron | 15.0% |
!! | AAAAAGATAAGATATTCAAT+TGG | + | chr6_1:9586581-9586600 | Msa0873950:intron | 15.0% |
!! | TGTTAATAATATTTGAGTAA+TGG | + | chr6_1:9589092-9589111 | Msa0873950:intron | 15.0% |
!!! | AATGATTGAAAGATTGATTT+TGG | - | chr6_1:9581749-9581768 | None:intergenic | 20.0% |
!!! | AATCATTTCATCTTTTTTGT+TGG | + | chr6_1:9581762-9581781 | Msa0873950:intron | 20.0% |
!!! | ATCATTTCATCTTTTTTGTT+GGG | + | chr6_1:9581763-9581782 | Msa0873950:intron | 20.0% |
!!! | TGAACAAATTTTTTGTTTAG+TGG | - | chr6_1:9582219-9582238 | None:intergenic | 20.0% |
!!! | CTAAACAAAAAATTTGTTCA+TGG | + | chr6_1:9582219-9582238 | Msa0873950:intron | 20.0% |
!!! | ATTGGATTTTAAAAATTAGG+TGG | - | chr6_1:9582293-9582312 | None:intergenic | 20.0% |
!!! | ACCTAATTTTTAAAATCCAA+TGG | + | chr6_1:9582292-9582311 | Msa0873950:intron | 20.0% |
!!! | TCCATTGGATTTTAAAAATT+AGG | - | chr6_1:9582296-9582315 | None:intergenic | 20.0% |
!! | TAACAAAGAAAAAAAACCAA+TGG | + | chr6_1:9582325-9582344 | Msa0873950:intron | 20.0% |
!!! | TATTATTTGAAGTAATCCAT+TGG | - | chr6_1:9582344-9582363 | None:intergenic | 20.0% |
!!! | CTTAAAAACAATGAAGTATT+GGG | + | chr6_1:9582792-9582811 | Msa0873950:intron | 20.0% |
!!! | CATTATTAGATTTTATTGGA+TGG | - | chr6_1:9582929-9582948 | None:intergenic | 20.0% |
!! | CATCCAATAAAATCTAATAA+TGG | + | chr6_1:9582927-9582946 | Msa0873950:intron | 20.0% |
!!! | CATCCATTATTAGATTTTAT+TGG | - | chr6_1:9582933-9582952 | None:intergenic | 20.0% |
!!! | CAATAAAATCTAATAATGGA+TGG | + | chr6_1:9582931-9582950 | Msa0873950:intron | 20.0% |
!!! | AAAAAAATAGTGGATTGTAA+TGG | + | chr6_1:9583005-9583024 | Msa0873950:intron | 20.0% |
!! | TCATGAATTAAATATCAAGA+AGG | - | chr6_1:9583279-9583298 | None:intergenic | 20.0% |
!!! | ATCTCTTATTTGATAATCAA+TGG | - | chr6_1:9583462-9583481 | None:intergenic | 20.0% |
!! | TGTTGTATATAATAAAGCAA+AGG | - | chr6_1:9584347-9584366 | None:intergenic | 20.0% |
!! | AAAATATCATGCATTTATCA+GGG | - | chr6_1:9584479-9584498 | None:intergenic | 20.0% |
!!! | AAGTTTGTTATTTGATTATC+TGG | + | chr6_1:9585185-9585204 | Msa0873950:intron | 20.0% |
!! | AAAACAACATATATAGGTAT+CGG | - | chr6_1:9585346-9585365 | None:intergenic | 20.0% |
!!! | CAGTTTTATAATTAGTTTAG+GGG | + | chr6_1:9585798-9585817 | Msa0873950:intron | 20.0% |
!! | ATAAAATCAGTGACATTAAT+TGG | + | chr6_1:9585906-9585925 | Msa0873950:intron | 20.0% |
!!! | TATACTTTTTGACAAGATAT+TGG | + | chr6_1:9585932-9585951 | Msa0873950:intron | 20.0% |
!! | ATTTCCAAAAAAGAAAAAAG+TGG | - | chr6_1:9585994-9586013 | None:intergenic | 20.0% |
!! | AAGAAATTACTCTAACAATT+TGG | + | chr6_1:9586182-9586201 | Msa0873950:intron | 20.0% |
!!! | AGATCCAATGTTAAAAATTT+TGG | - | chr6_1:9586368-9586387 | None:intergenic | 20.0% |
!! | TTCATCTTAACAAGAATTTA+AGG | + | chr6_1:9586490-9586509 | Msa0873950:intron | 20.0% |
!! | AAAGACAACATATTAAAAGT+AGG | + | chr6_1:9586533-9586552 | Msa0873950:intron | 20.0% |
!! | AATTCATTGTGAAGTTAATA+GGG | + | chr6_1:9587076-9587095 | Msa0873950:intron | 20.0% |
!!! | ATTAATCAAGTTTGATAACT+AGG | + | chr6_1:9587381-9587400 | Msa0873950:intron | 20.0% |
!!! | GAAATTTTATTTCTAAGTCT+TGG | - | chr6_1:9587493-9587512 | None:intergenic | 20.0% |
!! | AGAAATAAAATTTCTAACAC+TGG | + | chr6_1:9587499-9587518 | Msa0873950:intron | 20.0% |
!! | ATGAATTATGAAAATACCTT+TGG | - | chr6_1:9587917-9587936 | None:intergenic | 20.0% |
!! | ATAATTCATATTGCCTAATT+TGG | + | chr6_1:9587928-9587947 | Msa0873950:intron | 20.0% |
!! | AGAAATTAATCATAAGTTTC+TGG | - | chr6_1:9588594-9588613 | None:intergenic | 20.0% |
!!! | ACTTTTAAGAATGAAAGATT+CGG | - | chr6_1:9588833-9588852 | None:intergenic | 20.0% |
!! | ATCTTTCATTCTTAAAAGTT+AGG | + | chr6_1:9588834-9588853 | Msa0873950:intron | 20.0% |
!! | TCTTTCATTCTTAAAAGTTA+GGG | + | chr6_1:9588835-9588854 | Msa0873950:intron | 20.0% |
!!! | TAAAATTTTTGTAGTACCAA+TGG | - | chr6_1:9589131-9589150 | None:intergenic | 20.0% |
!! | GAAAAGTAATTAGAGTTTAA+CGG | - | chr6_1:9589232-9589251 | None:intergenic | 20.0% |
! | CACTTTATATAATGATCCTA+AGG | - | chr6_1:9581694-9581713 | None:intergenic | 25.0% |
! | AGAAAATCTAGAGAATCATA+GGG | - | chr6_1:9581841-9581860 | None:intergenic | 25.0% |
! | ATCATCAACAATACAAACAA+CGG | - | chr6_1:9581890-9581909 | None:intergenic | 25.0% |
!! | ATGATGAGATTGATTTCAAT+TGG | + | chr6_1:9581905-9581924 | Msa0873950:intron | 25.0% |
!! | TGATTTCAATTGGTTTAAGT+TGG | + | chr6_1:9581915-9581934 | Msa0873950:intron | 25.0% |
! | AAAACACAAACATTCAGAAT+AGG | - | chr6_1:9582045-9582064 | None:intergenic | 25.0% |
!!! | TGTGTTTTTTTCTTTCTTTC+CGG | + | chr6_1:9582057-9582076 | Msa0873950:intron | 25.0% |
!!! | CAAATTTTTTGTTTAGTGGA+TGG | - | chr6_1:9582215-9582234 | None:intergenic | 25.0% |
!! | CAAAAAATTTGTTCATGGAT+TGG | + | chr6_1:9582224-9582243 | Msa0873950:intron | 25.0% |
!!! | GATTTTAAAAATTAGGTGGA+TGG | - | chr6_1:9582289-9582308 | None:intergenic | 25.0% |
! | TATTATTTAATTACAGGTGG+TGG | + | chr6_1:9582522-9582541 | Msa0873950:intron | 25.0% |
! | ATTAATTAAATGGTGAACAG+TGG | - | chr6_1:9582723-9582742 | None:intergenic | 25.0% |
! | GCTTAAAAACAATGAAGTAT+TGG | + | chr6_1:9582791-9582810 | Msa0873950:intron | 25.0% |
!! | ATACACTTTGATTTATGGAT+CGG | + | chr6_1:9582894-9582913 | Msa0873950:intron | 25.0% |
!!! | AAATCTAATAATGGATGGAT+TGG | + | chr6_1:9582936-9582955 | Msa0873950:intron | 25.0% |
!! | ATAATACTTAATGGATGGAT+CGG | + | chr6_1:9582965-9582984 | Msa0873950:intron | 25.0% |
! | ATAATTCTTTCATTTGATGC+AGG | + | chr6_1:9583184-9583203 | Msa0873950:intron | 25.0% |
! | TGAATGACTTATTCTTAATG+CGG | - | chr6_1:9583366-9583385 | None:intergenic | 25.0% |
! | TTTAAATCGTTTACTTAGGT+TGG | + | chr6_1:9583418-9583437 | Msa0873950:intron | 25.0% |
!!! | ATTTTGATTTCCAAGCAAAA+TGG | - | chr6_1:9584298-9584317 | None:intergenic | 25.0% |
!! | ATTTTGCTTGGAAATCAAAA+TGG | + | chr6_1:9584297-9584316 | Msa0873950:intron | 25.0% |
!! | ACATTGCTTTGTAATTTGTA+TGG | + | chr6_1:9584407-9584426 | Msa0873950:intron | 25.0% |
! | AAATATCATGCATTTATCAG+GGG | - | chr6_1:9584478-9584497 | None:intergenic | 25.0% |
! | GAAAATATCATGCATTTATC+AGG | - | chr6_1:9584480-9584499 | None:intergenic | 25.0% |
! | AAACTTCTTGCATTAAAAGA+AGG | + | chr6_1:9584988-9585007 | Msa0873950:CDS | 25.0% |
! | ATGTAATGTCAACTAAATCA+TGG | + | chr6_1:9585237-9585256 | Msa0873950:intron | 25.0% |
! | TGTAATGTCAACTAAATCAT+GGG | + | chr6_1:9585238-9585257 | Msa0873950:intron | 25.0% |
! | GAATGAGATAAACTCTAATA+TGG | - | chr6_1:9585281-9585300 | None:intergenic | 25.0% |
!!! | GAGATTTCTTCTTTGTTATT+TGG | - | chr6_1:9585599-9585618 | None:intergenic | 25.0% |
!!! | AAGAAAGTTTTGTATATTGC+AGG | + | chr6_1:9585757-9585776 | Msa0873950:intron | 25.0% |
!!! | TATTGCTTTTGAGAAATGTA+GGG | - | chr6_1:9585831-9585850 | None:intergenic | 25.0% |
!!! | ATGTCCACTTTTTTCTTTTT+TGG | + | chr6_1:9585987-9586006 | Msa0873950:intron | 25.0% |
! | AGAGTACATTTCTTGTTAAA+AGG | - | chr6_1:9586028-9586047 | None:intergenic | 25.0% |
! | AGAAATGTACTCTAACAATT+TGG | + | chr6_1:9586035-9586054 | Msa0873950:intron | 25.0% |
! | TGGTTAATAATTTCATGCAT+AGG | + | chr6_1:9586601-9586620 | Msa0873950:intron | 25.0% |
! | CAATTCATTGTGAAGTTAAT+AGG | + | chr6_1:9587075-9587094 | Msa0873950:intron | 25.0% |
! | ATGTTGTTAAGATATACCAA+TGG | - | chr6_1:9587108-9587127 | None:intergenic | 25.0% |
! | TATCTTAACAACATTACAGA+AGG | + | chr6_1:9587114-9587133 | Msa0873950:CDS | 25.0% |
! | ATCTTAACAACATTACAGAA+GGG | + | chr6_1:9587115-9587134 | Msa0873950:CDS | 25.0% |
!!! | AACTTTAGTTTGTGATATAG+AGG | - | chr6_1:9587213-9587232 | None:intergenic | 25.0% |
!!! | AGTAATGAGACCTTTATTTT+CGG | - | chr6_1:9587341-9587360 | None:intergenic | 25.0% |
! | ATAGACTTCAACATTATAAG+CGG | - | chr6_1:9587551-9587570 | None:intergenic | 25.0% |
! | AACATGAACAATACTATATG+TGG | - | chr6_1:9587582-9587601 | None:intergenic | 25.0% |
! | ATATAGTATTGTTCATGTTG+TGG | + | chr6_1:9587583-9587602 | Msa0873950:intron | 25.0% |
!!! | GACATTTTTTATATGACATC+AGG | - | chr6_1:9588349-9588368 | None:intergenic | 25.0% |
! | AATAGTAAAGAGCTACATTT+AGG | - | chr6_1:9588695-9588714 | None:intergenic | 25.0% |
! | TTTGCAGTTATATATTTGCA+GGG | - | chr6_1:9589063-9589082 | None:intergenic | 25.0% |
! | ATTTGCAGTTATATATTTGC+AGG | - | chr6_1:9589064-9589083 | None:intergenic | 25.0% |
! | GTAACATAAAAGTGACATTA+TGG | - | chr6_1:9589177-9589196 | None:intergenic | 25.0% |
CAGAAAATCTAGAGAATCAT+AGG | - | chr6_1:9581842-9581861 | None:intergenic | 30.0% | |
GATTATGAGATCATTGCAAT+TGG | + | chr6_1:9581942-9581961 | Msa0873950:intron | 30.0% | |
! | CATCGTGGAACATATAATTT+TGG | + | chr6_1:9581965-9581984 | Msa0873950:intron | 30.0% |
CATGAAACAGAATTAAGTCA+TGG | - | chr6_1:9582014-9582033 | None:intergenic | 30.0% | |
! | AACATTCAGAATAGGTCTTT+TGG | - | chr6_1:9582037-9582056 | None:intergenic | 30.0% |
!!! | GTGTTTTTTTCTTTCTTTCC+GGG | + | chr6_1:9582058-9582077 | Msa0873950:intron | 30.0% |
!!! | TAGTGGTTACATTAGTTTTC+AGG | + | chr6_1:9582104-9582123 | Msa0873950:intron | 30.0% |
!! | TTTTTGTTTAGTGGATGGAT+TGG | - | chr6_1:9582210-9582229 | None:intergenic | 30.0% |
AATCCATCCATTAAAGACTA+TGG | + | chr6_1:9582252-9582271 | Msa0873950:intron | 30.0% | |
AATCCATCCATAGTCTTTAA+TGG | - | chr6_1:9582262-9582281 | None:intergenic | 30.0% | |
TTGTTAAAGATGTGATCCAT+TGG | - | chr6_1:9582311-9582330 | None:intergenic | 30.0% | |
GGCTTATGTCAAACATTATT+GGG | + | chr6_1:9582769-9582788 | Msa0873950:intron | 30.0% | |
TGGATGGACATAATACTTAA+TGG | + | chr6_1:9582956-9582975 | Msa0873950:intron | 30.0% | |
TGGACATAATACTTAATGGA+TGG | + | chr6_1:9582960-9582979 | Msa0873950:intron | 30.0% | |
! | CTTAATGGATGGATCAAAAA+GGG | - | chr6_1:9583040-9583059 | None:intergenic | 30.0% |
! | TCTTAATGGATGGATCAAAA+AGG | - | chr6_1:9583041-9583060 | None:intergenic | 30.0% |
GATATGGATTTGGATCTTAA+TGG | - | chr6_1:9583055-9583074 | None:intergenic | 30.0% | |
ATAGCAACAAACAAACATTC+AGG | - | chr6_1:9583164-9583183 | None:intergenic | 30.0% | |
AGAAGGAAAACTAACTTCTT+GGG | - | chr6_1:9583262-9583281 | None:intergenic | 30.0% | |
AAGAAGGAAAACTAACTTCT+TGG | - | chr6_1:9583263-9583282 | None:intergenic | 30.0% | |
!!! | GTTGTTTTTAGAGAATCACT+TGG | + | chr6_1:9583805-9583824 | Msa0873950:intron | 30.0% |
!! | ATTCTTTTCCACCTACTTTT+AGG | + | chr6_1:9583849-9583868 | Msa0873950:intron | 30.0% |
! | CTTTTCCTCAATGTGTATTA+GGG | - | chr6_1:9584049-9584068 | None:intergenic | 30.0% |
! | ACTTTTCCTCAATGTGTATT+AGG | - | chr6_1:9584050-9584069 | None:intergenic | 30.0% |
!!! | TTTTCAAGTACTCATCAAGT+GGG | - | chr6_1:9584211-9584230 | None:intergenic | 30.0% |
!!! | TTTTTCAAGTACTCATCAAG+TGG | - | chr6_1:9584212-9584231 | None:intergenic | 30.0% |
GATGAGTACTTGAAAAATCA+TGG | + | chr6_1:9584215-9584234 | Msa0873950:intron | 30.0% | |
! | CAAATCAATACCATTTTGCT+TGG | + | chr6_1:9584285-9584304 | Msa0873950:intron | 30.0% |
ATAATAAAGCAAAGGTGAGA+AGG | - | chr6_1:9584339-9584358 | None:intergenic | 30.0% | |
! | CATGATATTTTCCATGTACA+AGG | + | chr6_1:9584488-9584507 | Msa0873950:intron | 30.0% |
TTGATGAAGTAATCCAAGTA+AGG | + | chr6_1:9584573-9584592 | Msa0873950:intron | 30.0% | |
ATGCTCATAAGTTAACCAAA+AGG | - | chr6_1:9584712-9584731 | None:intergenic | 30.0% | |
! | TAAGAGTTGCCATTTATCAA+TGG | - | chr6_1:9584921-9584940 | None:intergenic | 30.0% |
ATCGGGAAAACAACATATAT+AGG | - | chr6_1:9585352-9585371 | None:intergenic | 30.0% | |
TTTGCTTCTCAAATTTGAAG+TGG | + | chr6_1:9585486-9585505 | Msa0873950:intron | 30.0% | |
! | TTGCTTCTCAAATTTGAAGT+GGG | + | chr6_1:9585487-9585506 | Msa0873950:intron | 30.0% |
CATCATGTTGCATATGTAAA+AGG | - | chr6_1:9585573-9585592 | None:intergenic | 30.0% | |
! | AAACTTTCTTTTCTGTCCAT+CGG | - | chr6_1:9585747-9585766 | None:intergenic | 30.0% |
!! | CTATTGCTTTTGAGAAATGT+AGG | - | chr6_1:9585832-9585851 | None:intergenic | 30.0% |
CAATGAAGTAACACATTAAC+AGG | - | chr6_1:9586255-9586274 | None:intergenic | 30.0% | |
! | AACATGACAATAGTAGCTTT+TGG | + | chr6_1:9586644-9586663 | Msa0873950:intron | 30.0% |
! | ATAGTAGCTTTTGGATCTTA+AGG | + | chr6_1:9586653-9586672 | Msa0873950:intron | 30.0% |
! | GATTATTACCAGGAATTTTC+AGG | - | chr6_1:9586687-9586706 | None:intergenic | 30.0% |
TGATTTACTACTTACTACCA+AGG | - | chr6_1:9586769-9586788 | None:intergenic | 30.0% | |
!!! | TCCTTGTTTTGTCTTTCTTT+TGG | + | chr6_1:9586798-9586817 | Msa0873950:intron | 30.0% |
ACCAAAAGAAAGACAAAACA+AGG | - | chr6_1:9586802-9586821 | None:intergenic | 30.0% | |
! | TTTTGTCTTTCTTTTGGTGA+AGG | + | chr6_1:9586804-9586823 | Msa0873950:intron | 30.0% |
CAGTGAAGATATAAAAGAGA+GGG | - | chr6_1:9586970-9586989 | None:intergenic | 30.0% | |
ACAGTGAAGATATAAAAGAG+AGG | - | chr6_1:9586971-9586990 | None:intergenic | 30.0% | |
!!! | TAATCTTGTTTTTCTCACTC+AGG | + | chr6_1:9587290-9587309 | Msa0873950:intron | 30.0% |
ATTGAAGATGCCGAAAATAA+AGG | + | chr6_1:9587328-9587347 | Msa0873950:CDS | 30.0% | |
AATCAGTAATATACCTTTGC+AGG | - | chr6_1:9587364-9587383 | None:intergenic | 30.0% | |
!! | TCTTACAAGTTTTATGAGTC+CGG | - | chr6_1:9587416-9587435 | None:intergenic | 30.0% |
TATAAAGACTGTTCTTGTTG+AGG | + | chr6_1:9587649-9587668 | Msa0873950:intron | 30.0% | |
AAAATTATACTGCGAGCTTT+CGG | + | chr6_1:9587770-9587789 | Msa0873950:intron | 30.0% | |
!!! | AGTTGATGGAGTTTTTGAAA+AGG | + | chr6_1:9587826-9587845 | Msa0873950:intron | 30.0% |
TGATCGAGCATATAACTATT+AGG | - | chr6_1:9587875-9587894 | None:intergenic | 30.0% | |
TATTGCCTAATTTGGTTGAT+AGG | + | chr6_1:9587936-9587955 | Msa0873950:intron | 30.0% | |
TTCAACCTATCAACCAAATT+AGG | - | chr6_1:9587944-9587963 | None:intergenic | 30.0% | |
!! | ACCTTGTATACTTTTTGTGT+TGG | + | chr6_1:9588148-9588167 | Msa0873950:intron | 30.0% |
!! | CCTTGTATACTTTTTGTGTT+GGG | + | chr6_1:9588149-9588168 | Msa0873950:intron | 30.0% |
TTCAAAATTGCACTTTCAGT+TGG | - | chr6_1:9588271-9588290 | None:intergenic | 30.0% | |
!! | ACTGAAAGTGCAATTTTGAA+TGG | + | chr6_1:9588271-9588290 | Msa0873950:CDS | 30.0% |
TTCAGAATAGTAAAATCACC+TGG | - | chr6_1:9588304-9588323 | None:intergenic | 30.0% | |
TCCATTTGAACACATTTCAA+AGG | + | chr6_1:9588440-9588459 | Msa0873950:intron | 30.0% | |
CAAGCATATTGTTCTTACTT+AGG | - | chr6_1:9588619-9588638 | None:intergenic | 30.0% | |
! | TGAACTTTTGAACTGATACT+TGG | + | chr6_1:9588640-9588659 | Msa0873950:intron | 30.0% |
TATAATATATGTGCATGACC+TGG | - | chr6_1:9588767-9588786 | None:intergenic | 30.0% | |
TATAGTTCACAAAACCTTGT+TGG | - | chr6_1:9588913-9588932 | None:intergenic | 30.0% | |
!! | AACAAGGTTTTGTGAACTAT+AGG | + | chr6_1:9588912-9588931 | Msa0873950:intron | 30.0% |
ACATTATGGTGAGATAAGAT+TGG | - | chr6_1:9589163-9589182 | None:intergenic | 30.0% | |
ATTCAAAATTCATGTCTGCA+TGG | - | chr6_1:9589751-9589770 | None:intergenic | 30.0% | |
GAATGAACCATTACGTTTAA+CGG | + | chr6_1:9589767-9589786 | Msa0873950:three_prime_UTR | 30.0% | |
ACATGGTTGAGATATACTAG+TGG | - | chr6_1:9581484-9581503 | None:intergenic | 35.0% | |
AGTATATCTCAACCATGTTG+TGG | + | chr6_1:9581486-9581505 | Msa0873950:CDS | 35.0% | |
!! | TTCTAGCTTTGCAGCAATTT+GGG | - | chr6_1:9581524-9581543 | None:intergenic | 35.0% |
!! | TTTCTAGCTTTGCAGCAATT+TGG | - | chr6_1:9581525-9581544 | None:intergenic | 35.0% |
! | GTGATTAGTTGTAGTACCTT+AGG | + | chr6_1:9581675-9581694 | Msa0873950:intron | 35.0% |
GGCAAATGTTAGTAAGTTAG+TGG | + | chr6_1:9582087-9582106 | Msa0873950:intron | 35.0% | |
TTTCAGGCATTTCATCACTT+TGG | + | chr6_1:9582120-9582139 | Msa0873950:intron | 35.0% | |
CATTTCATCACTTTGGACTA+GGG | + | chr6_1:9582127-9582146 | Msa0873950:intron | 35.0% | |
! | ATTTCATCACTTTGGACTAG+GGG | + | chr6_1:9582128-9582147 | Msa0873950:intron | 35.0% |
!!! | GGATTTTATAGTGGATGGAT+CGG | - | chr6_1:9582185-9582204 | None:intergenic | 35.0% |
!! | TGGATGGATTTTATAGTGGA+TGG | - | chr6_1:9582190-9582209 | None:intergenic | 35.0% |
!! | GGATTGGATGGATTTTATAG+TGG | - | chr6_1:9582194-9582213 | None:intergenic | 35.0% |
CATCCATAGTCTTTAATGGA+TGG | - | chr6_1:9582258-9582277 | None:intergenic | 35.0% | |
CATCCATTAAAGACTATGGA+TGG | + | chr6_1:9582256-9582275 | Msa0873950:intron | 35.0% | |
AATTAAATGGTGAACAGTGG+TGG | - | chr6_1:9582720-9582739 | None:intergenic | 35.0% | |
GGGCTTATGTCAAACATTAT+TGG | + | chr6_1:9582768-9582787 | Msa0873950:intron | 35.0% | |
! | ACTTTGATTTATGGATCGGA+TGG | + | chr6_1:9582898-9582917 | Msa0873950:intron | 35.0% |
!! | CTAATAATGGATGGATTGGA+TGG | + | chr6_1:9582940-9582959 | Msa0873950:intron | 35.0% |
!! | AGTGGATTGTAATGGACTAA+TGG | + | chr6_1:9583013-9583032 | Msa0873950:intron | 35.0% |
TGGATTTGGATCTTAATGGA+TGG | - | chr6_1:9583051-9583070 | None:intergenic | 35.0% | |
TCTTTCATTTGATGCAGGAT+AGG | + | chr6_1:9583189-9583208 | Msa0873950:intron | 35.0% | |
GAAGGAAAACTAACTTCTTG+GGG | - | chr6_1:9583261-9583280 | None:intergenic | 35.0% | |
TGGTCAAAAGAGTTAGTAGA+AGG | - | chr6_1:9583333-9583352 | None:intergenic | 35.0% | |
!!! | TTACTTAGGTTGGTTTTGTG+TGG | + | chr6_1:9583428-9583447 | Msa0873950:intron | 35.0% |
TGCTGAAGAATGTAAGCATT+GGG | - | chr6_1:9583741-9583760 | None:intergenic | 35.0% | |
TTGCTGAAGAATGTAAGCAT+TGG | - | chr6_1:9583742-9583761 | None:intergenic | 35.0% | |
TTGACACAACTAACACCTTT+GGG | - | chr6_1:9583782-9583801 | None:intergenic | 35.0% | |
ATTGACACAACTAACACCTT+TGG | - | chr6_1:9583783-9583802 | None:intergenic | 35.0% | |
TTCACAGTGAACCTAAAAGT+AGG | - | chr6_1:9583863-9583882 | None:intergenic | 35.0% | |
AATAAGAAGGAAAACTCACC+AGG | - | chr6_1:9583981-9584000 | None:intergenic | 35.0% | |
AAGTTCCCTAATACACATTG+AGG | + | chr6_1:9584041-9584060 | Msa0873950:intron | 35.0% | |
! | AAAGTATCACCTTCACCATT+CGG | + | chr6_1:9584065-9584084 | Msa0873950:intron | 35.0% |
TCATTCATGTCAATTGCTGA+CGG | + | chr6_1:9584092-9584111 | Msa0873950:intron | 35.0% | |
! | CACATTTGATTGATTCATCG+AGG | - | chr6_1:9584126-9584145 | None:intergenic | 35.0% |
CAAATGTGCAAATACTGTCA+CGG | + | chr6_1:9584138-9584157 | Msa0873950:intron | 35.0% | |
CATGGATTCTGATTTCTGTT+TGG | + | chr6_1:9584233-9584252 | Msa0873950:intron | 35.0% | |
GGGGAATGATACATATAAGA+GGG | - | chr6_1:9584459-9584478 | None:intergenic | 35.0% | |
AGGGGAATGATACATATAAG+AGG | - | chr6_1:9584460-9584479 | None:intergenic | 35.0% | |
CAATTCCTTGGATCTTATGA+GGG | - | chr6_1:9584514-9584533 | None:intergenic | 35.0% | |
CAAAAGATTCATGCCTTACT+TGG | - | chr6_1:9584589-9584608 | None:intergenic | 35.0% | |
! | AAATAAAGTAGGGGTCCTTT+TGG | + | chr6_1:9584694-9584713 | Msa0873950:intron | 35.0% |
!!! | GTCTTTTTTTCCTCTCTTCT+TGG | + | chr6_1:9584747-9584766 | Msa0873950:intron | 35.0% |
! | GTGCGTGAATTTTCATAATG+TGG | - | chr6_1:9584778-9584797 | None:intergenic | 35.0% |
CGCTATAGTCCATTGATAAA+TGG | + | chr6_1:9584909-9584928 | Msa0873950:intron | 35.0% | |
TGCATTAAAAGAAGGTTTGC+TGG | + | chr6_1:9584996-9585015 | Msa0873950:CDS | 35.0% | |
AATTAAGGTTGCAAAGAAGC+CGG | + | chr6_1:9585137-9585156 | Msa0873950:CDS | 35.0% | |
! | ATGAGTTTTCCAGCATTTTC+CGG | - | chr6_1:9585159-9585178 | None:intergenic | 35.0% |
!!! | TATGTTGTTTTCCCGATCTT+TGG | + | chr6_1:9585355-9585374 | Msa0873950:intron | 35.0% |
! | ATTCAAAGAGCACAGATGAT+AGG | - | chr6_1:9585390-9585409 | None:intergenic | 35.0% |
! | TTCTCAAATTTGAAGTGGGA+TGG | + | chr6_1:9585491-9585510 | Msa0873950:intron | 35.0% |
! | TCTCAAATTTGAAGTGGGAT+GGG | + | chr6_1:9585492-9585511 | Msa0873950:intron | 35.0% |
CTCATGTTACAGTTTGTGTT+TGG | + | chr6_1:9585530-9585549 | Msa0873950:intron | 35.0% | |
TTACTCTAACAATTTGGCAG+AGG | + | chr6_1:9586188-9586207 | Msa0873950:intron | 35.0% | |
TACTCTAACAATTTGGCAGA+GGG | + | chr6_1:9586189-9586208 | Msa0873950:intron | 35.0% | |
! | GCTACTATTGTCATGTTTTG+TGG | - | chr6_1:9586641-9586660 | None:intergenic | 35.0% |
AATGTCAACCTGAAAATTCC+TGG | + | chr6_1:9586676-9586695 | Msa0873950:intron | 35.0% | |
! | GACAGTTTAGGATTATTACC+AGG | - | chr6_1:9586697-9586716 | None:intergenic | 35.0% |
TACTTACTACCAAGGCAAAT+AGG | - | chr6_1:9586761-9586780 | None:intergenic | 35.0% | |
GAAAGACAAAACAAGGAGAT+TGG | - | chr6_1:9586795-9586814 | None:intergenic | 35.0% | |
CCATGTTATCTGATGAAGAA+AGG | - | chr6_1:9586881-9586900 | None:intergenic | 35.0% | |
CCTTTCTTCATCAGATAACA+TGG | + | chr6_1:9586878-9586897 | Msa0873950:CDS | 35.0% | |
GCAACACTTTGCAATTAAGA+AGG | + | chr6_1:9586902-9586921 | Msa0873950:CDS | 35.0% | |
! | TTCACTGTCTTATTCAGCTA+TGG | + | chr6_1:9586983-9587002 | Msa0873950:intron | 35.0% |
! | GATAACTAGGTTTTCTTTCC+CGG | + | chr6_1:9587394-9587413 | Msa0873950:intron | 35.0% |
!! | CTTACAAGTTTTATGAGTCC+GGG | - | chr6_1:9587415-9587434 | None:intergenic | 35.0% |
AAAAACTCCATCAACTCCTT+TGG | - | chr6_1:9587822-9587841 | None:intergenic | 35.0% | |
TGAAAATCCTGTCAATCCAA+AGG | + | chr6_1:9587898-9587917 | Msa0873950:intron | 35.0% | |
GAAAATACCTTTGGATTGAC+AGG | - | chr6_1:9587908-9587927 | None:intergenic | 35.0% | |
TATCTAAGTTTCTCTCCTTG+AGG | - | chr6_1:9588111-9588130 | None:intergenic | 35.0% | |
GGAGAGAAACTTAGATATGA+AGG | + | chr6_1:9588114-9588133 | Msa0873950:CDS | 35.0% | |
! | CCCAACACAAAAAGTATACA+AGG | - | chr6_1:9588152-9588171 | None:intergenic | 35.0% |
!! | GAAAGTGCAATTTTGAATGG+AGG | + | chr6_1:9588274-9588293 | Msa0873950:CDS | 35.0% |
AATTCTTAGACAACCAGTTG+AGG | + | chr6_1:9588398-9588417 | Msa0873950:intron | 35.0% | |
AATCAATTAACGACCTCAAC+TGG | - | chr6_1:9588414-9588433 | None:intergenic | 35.0% | |
!! | GCCTTTGAAATGTGTTCAAA+TGG | - | chr6_1:9588444-9588463 | None:intergenic | 35.0% |
CAACATCTAATCCAAGGTAT+CGG | + | chr6_1:9588464-9588483 | Msa0873950:CDS | 35.0% | |
TCTCCTAGATGAAGTTATTC+AGG | + | chr6_1:9588520-9588539 | Msa0873950:CDS | 35.0% | |
CTACCTGAATAACTTCATCT+AGG | - | chr6_1:9588526-9588545 | None:intergenic | 35.0% | |
! | GACAAAGCTTTGTCAAGATT+TGG | - | chr6_1:9588741-9588760 | None:intergenic | 35.0% |
TTGAGTTACATAGTGACATG+AGG | + | chr6_1:9588794-9588813 | Msa0873950:intron | 35.0% | |
!! | ATACTAGCTCTGCAAATACA+AGG | + | chr6_1:9588874-9588893 | Msa0873950:intron | 35.0% |
!! | TACTAGCTCTGCAAATACAA+GGG | + | chr6_1:9588875-9588894 | Msa0873950:intron | 35.0% |
!! | TGCTTTGAAAGAAGGTTTAC+TGG | + | chr6_1:9588972-9588991 | Msa0873950:intron | 35.0% |
!! | TTGAGTAATGGATATGCATC+AGG | + | chr6_1:9589104-9589123 | Msa0873950:intron | 35.0% |
!! | TGAGTAATGGATATGCATCA+GGG | + | chr6_1:9589105-9589124 | Msa0873950:intron | 35.0% |
! | ATGTGAATGTCTTTTGCAGA+TGG | + | chr6_1:9589261-9589280 | Msa0873950:intron | 35.0% |
! | TGTGAATGTCTTTTGCAGAT+GGG | + | chr6_1:9589262-9589281 | Msa0873950:intron | 35.0% |
ATTCAAAATCGTTGTTGTGC+AGG | + | chr6_1:9589496-9589515 | Msa0873950:intron | 35.0% | |
ACTTTGTGAATGACAACGTT+TGG | + | chr6_1:9589691-9589710 | Msa0873950:three_prime_UTR | 35.0% | |
! | TTGGTCACTAAGAACTTGTT+AGG | + | chr6_1:9589793-9589812 | Msa0873950:three_prime_UTR | 35.0% |
TTACTCTTGCGGAGAAAATT+TGG | - | chr6_1:9589846-9589865 | None:intergenic | 35.0% | |
! | AAATTTTCTCCGCAAGAGTA+AGG | + | chr6_1:9589845-9589864 | Msa0873950:three_prime_UTR | 35.0% |
! | TAGTTTTCTCCTTACTCTTG+CGG | - | chr6_1:9589857-9589876 | None:intergenic | 35.0% |
TATCTCAACCATGTTGTGGA+TGG | + | chr6_1:9581490-9581509 | Msa0873950:CDS | 40.0% | |
TGCTGCAAAGCTAGAAATGA+TGG | + | chr6_1:9581528-9581547 | Msa0873950:CDS | 40.0% | |
TGATGTTGAGATACGATGCA+TGG | - | chr6_1:9581794-9581813 | None:intergenic | 40.0% | |
GCATTTCATCACTTTGGACT+AGG | + | chr6_1:9582126-9582145 | Msa0873950:intron | 40.0% | |
!! | TTTATAGTGGATGGATCGGA+TGG | - | chr6_1:9582181-9582200 | None:intergenic | 40.0% |
!! | TGTTTAGTGGATGGATTGGA+TGG | - | chr6_1:9582206-9582225 | None:intergenic | 40.0% |
! | TACTTAATGGATGGATCGGA+TGG | + | chr6_1:9582969-9582988 | Msa0873950:intron | 40.0% |
GGATTGGATGGATATGGATT+TGG | - | chr6_1:9583065-9583084 | None:intergenic | 40.0% | |
!! | ATGGATGGATTGGATGGATA+TGG | - | chr6_1:9583071-9583090 | None:intergenic | 40.0% |
ACATGTGAAGTCCAAAGTAG+GGG | - | chr6_1:9583101-9583120 | None:intergenic | 40.0% | |
CACATGTGAAGTCCAAAGTA+GGG | - | chr6_1:9583102-9583121 | None:intergenic | 40.0% | |
ACACATGTGAAGTCCAAAGT+AGG | - | chr6_1:9583103-9583122 | None:intergenic | 40.0% | |
CATGATTATTGCAGATGCTG+AGG | + | chr6_1:9583218-9583237 | Msa0873950:CDS | 40.0% | |
CTTAATGCGGCTACTAAAGT+TGG | - | chr6_1:9583353-9583372 | None:intergenic | 40.0% | |
ATACCAGTGTTTCCACTAGT+AGG | - | chr6_1:9583540-9583559 | None:intergenic | 40.0% | |
ACTAGTGGAAACACTGGTAT+TGG | + | chr6_1:9583540-9583559 | Msa0873950:CDS | 40.0% | |
!! | TGGAAACACTGGTATTGGTT+TGG | + | chr6_1:9583545-9583564 | Msa0873950:CDS | 40.0% |
!! | TGGTATTGGTTTGGCATTCA+TGG | + | chr6_1:9583554-9583573 | Msa0873950:CDS | 40.0% |
AGAACTATTCTCCGTGCTTT+CGG | + | chr6_1:9583636-9583655 | Msa0873950:CDS | 40.0% | |
TGAAAATCCTGCAAACCCAA+AGG | + | chr6_1:9583764-9583783 | Msa0873950:CDS | 40.0% | |
ACAGTGAACCTAAAAGTAGG+TGG | - | chr6_1:9583860-9583879 | None:intergenic | 40.0% | |
TAGGTTCACTGTGAAACTAC+TGG | + | chr6_1:9583868-9583887 | Msa0873950:intron | 40.0% | |
!! | AAAGTTGATGCCCTTGTTTC+TGG | + | chr6_1:9583919-9583938 | Msa0873950:CDS | 40.0% |
GGTTCCTATACCAGAAACAA+GGG | - | chr6_1:9583932-9583951 | None:intergenic | 40.0% | |
!! | CTTGTTTCTGGTATAGGAAC+CGG | + | chr6_1:9583931-9583950 | Msa0873950:CDS | 40.0% |
AAGTATCACCTTCACCATTC+GGG | + | chr6_1:9584066-9584085 | Msa0873950:intron | 40.0% | |
ACAAGTGCATACAATCATCG+AGG | - | chr6_1:9584178-9584197 | None:intergenic | 40.0% | |
GTTTGGTACTTACTACGTAC+TGG | + | chr6_1:9584250-9584269 | Msa0873950:intron | 40.0% | |
CCAATTCCTTGGATCTTATG+AGG | - | chr6_1:9584515-9584534 | None:intergenic | 40.0% | |
CCTCATAAGATCCAAGGAAT+TGG | + | chr6_1:9584512-9584531 | Msa0873950:intron | 40.0% | |
TGGTTAACTTATGAGCATGC+AGG | + | chr6_1:9584714-9584733 | Msa0873950:intron | 40.0% | |
ACGCACTTACTGTTCATCTT+TGG | + | chr6_1:9584792-9584811 | Msa0873950:intron | 40.0% | |
CGCACTTACTGTTCATCTTT+GGG | + | chr6_1:9584793-9584812 | Msa0873950:intron | 40.0% | |
! | CTGTTCATCTTTGGGAAAGA+TGG | + | chr6_1:9584801-9584820 | Msa0873950:intron | 40.0% |
AGTTTCAATAGCTTCTTCGC+TGG | - | chr6_1:9584965-9584984 | None:intergenic | 40.0% | |
CTTTGCAACCTTAATTGCAG+CGG | - | chr6_1:9585133-9585152 | None:intergenic | 40.0% | |
ATGTCAACTAAATCATGGGC+TGG | + | chr6_1:9585242-9585261 | Msa0873950:intron | 40.0% | |
GTAACATGAGATGCTACCAT+TGG | - | chr6_1:9585520-9585539 | None:intergenic | 40.0% | |
! | TACAAAAAATGCAGTGCCGA+TGG | + | chr6_1:9585728-9585747 | Msa0873950:intron | 40.0% |
ACTCTAACAATTTGGCAGAG+GGG | + | chr6_1:9586190-9586209 | Msa0873950:intron | 40.0% | |
TGCATGTCTTCTGACAGTTT+AGG | - | chr6_1:9586709-9586728 | None:intergenic | 40.0% | |
CAGAAGACATGCAACTGATT+AGG | + | chr6_1:9586716-9586735 | Msa0873950:intron | 40.0% | |
TGCAACTGATTAGGTGAAGT+TGG | + | chr6_1:9586725-9586744 | Msa0873950:intron | 40.0% | |
GTTAATAGGGAACACACCAT+TGG | + | chr6_1:9587089-9587108 | Msa0873950:intron | 40.0% | |
CTCTCAAGACTCACAAAAGA+TGG | - | chr6_1:9587749-9587768 | None:intergenic | 40.0% | |
TAGACTCATTATGAGACCAC+TGG | + | chr6_1:9587995-9588014 | Msa0873950:intron | 40.0% | |
AGAATTGATGCTTTGGTTGC+AGG | + | chr6_1:9588046-9588065 | Msa0873950:CDS | 40.0% | |
GAATTGATGCTTTGGTTGCA+GGG | + | chr6_1:9588047-9588066 | Msa0873950:CDS | 40.0% | |
! | ATTTTGAATGGAGGAAAGCC+AGG | + | chr6_1:9588283-9588302 | Msa0873950:CDS | 40.0% |
AAAGGCCAACATCTAATCCA+AGG | + | chr6_1:9588458-9588477 | Msa0873950:intron | 40.0% | |
! | CGATACCTTGGATTAGATGT+TGG | - | chr6_1:9588466-9588485 | None:intergenic | 40.0% |
!! | CTAATCCAAGGTATCGGTAA+TGG | + | chr6_1:9588470-9588489 | Msa0873950:CDS | 40.0% |
AGCTTGCAACACTAATACAC+TGG | + | chr6_1:9588544-9588563 | Msa0873950:intron | 40.0% | |
!!! | GGATTCTGTTTTGACCAACA+AGG | + | chr6_1:9588896-9588915 | Msa0873950:intron | 40.0% |
!! | AAGCTGCTTGCTTTGAAAGA+AGG | + | chr6_1:9588964-9588983 | Msa0873950:intron | 40.0% |
TTGCAGATGGGAATTTCATC+AGG | + | chr6_1:9589274-9589293 | Msa0873950:intron | 40.0% | |
CAGCAGCTGCAATAAAACTA+GGG | + | chr6_1:9589305-9589324 | Msa0873950:CDS | 40.0% | |
! | CAGGTGGTTTTTCCTAGTTT+TGG | + | chr6_1:9589515-9589534 | Msa0873950:intron | 40.0% |
AAGTAACGCTCTCCAAAACT+AGG | - | chr6_1:9589530-9589549 | None:intergenic | 40.0% | |
!!! | CACCACTTTTTGAATCCATC+AGG | + | chr6_1:9589555-9589574 | Msa0873950:CDS | 40.0% |
AGTCATTCTCATTCAAGCTG+TGG | + | chr6_1:9589636-9589655 | Msa0873950:three_prime_UTR | 40.0% | |
GAATGACAACGTTTGGACTT+TGG | + | chr6_1:9589698-9589717 | Msa0873950:three_prime_UTR | 40.0% | |
!! | AACGTTTGGACTTTGGAGTT+TGG | + | chr6_1:9589705-9589724 | Msa0873950:three_prime_UTR | 40.0% |
CCAATCACCGTTAAACGTAA+TGG | - | chr6_1:9589777-9589796 | None:intergenic | 40.0% | |
CCATTACGTTTAACGGTGAT+TGG | + | chr6_1:9589774-9589793 | Msa0873950:three_prime_UTR | 40.0% | |
AAACACAGCCATCCACAACA+TGG | - | chr6_1:9581501-9581520 | None:intergenic | 45.0% | |
CTGTCTTTGACACTAGAGCA+AGG | - | chr6_1:9581556-9581575 | None:intergenic | 45.0% | |
CTTGCTCTAGTGTCAAAGAC+AGG | + | chr6_1:9581554-9581573 | Msa0873950:CDS | 45.0% | |
GATCATTGCAATTGGCATCG+TGG | + | chr6_1:9581950-9581969 | Msa0873950:intron | 45.0% | |
TTCTTTCTTTCCGGGTACGT+AGG | + | chr6_1:9582066-9582085 | Msa0873950:intron | 45.0% | |
CTAACATTTGCCTACGTACC+CGG | - | chr6_1:9582079-9582098 | None:intergenic | 45.0% | |
TCGGATGGATATGGATCTCA+TGG | - | chr6_1:9582166-9582185 | None:intergenic | 45.0% | |
!! | GGCAAAATGGATGGATTGGA+TGG | - | chr6_1:9583077-9583096 | None:intergenic | 45.0% |
ACCAACCAAACTACCTACGT+GGG | + | chr6_1:9583137-9583156 | Msa0873950:intron | 45.0% | |
ATTGCAGATGCTGAGGAGAA+AGG | + | chr6_1:9583225-9583244 | Msa0873950:CDS | 45.0% | |
TTCCACTAGTAGGCTCAATG+AGG | - | chr6_1:9583530-9583549 | None:intergenic | 45.0% | |
AAGACTCATTGAAGCAGGCA+TGG | - | chr6_1:9583610-9583629 | None:intergenic | 45.0% | |
CTCTCAAGACTCATTGAAGC+AGG | - | chr6_1:9583615-9583634 | None:intergenic | 45.0% | |
GTTCTCACAGATCCAGCTAA+AGG | + | chr6_1:9583669-9583688 | Msa0873950:CDS | 45.0% | |
! | GATCCAGCTAAAGGCATGAA+AGG | + | chr6_1:9583678-9583697 | Msa0873950:CDS | 45.0% |
! | ACTAACACCTTTGGGTTTGC+AGG | - | chr6_1:9583774-9583793 | None:intergenic | 45.0% |
AAACTACTGGACCAGAGATC+TGG | + | chr6_1:9583881-9583900 | Msa0873950:CDS | 45.0% | |
! | AGATCTGGAAAAGCTCTGGT+GGG | + | chr6_1:9583896-9583915 | Msa0873950:CDS | 45.0% |
!! | GATGCCCTTGTTTCTGGTAT+AGG | + | chr6_1:9583925-9583944 | Msa0873950:CDS | 45.0% |
CGGTTCCTATACCAGAAACA+AGG | - | chr6_1:9583933-9583952 | None:intergenic | 45.0% | |
AGTATCACCTTCACCATTCG+GGG | + | chr6_1:9584067-9584086 | Msa0873950:intron | 45.0% | |
! | TCTTATGAGGGCCTTGTACA+TGG | - | chr6_1:9584502-9584521 | None:intergenic | 45.0% |
AAGATCCAAGGAATTGGTGC+TGG | + | chr6_1:9584518-9584537 | Msa0873950:intron | 45.0% | |
AAATCGACATCCAGAACACC+AGG | - | chr6_1:9584551-9584570 | None:intergenic | 45.0% | |
!! | CATGGGCTGGAGTACATAAT+TGG | + | chr6_1:9585255-9585274 | Msa0873950:intron | 45.0% |
AGGTAACGCTCTCCAAAGAT+CGG | - | chr6_1:9585370-9585389 | None:intergenic | 45.0% | |
TGAATCCGTAAAGCGAGAAG+CGG | + | chr6_1:9585405-9585424 | Msa0873950:intron | 45.0% | |
TGATTAGGTGAAGTTGGACC+CGG | + | chr6_1:9586731-9586750 | Msa0873950:intron | 45.0% | |
AGGTCTCATTACTCCTGCAA+AGG | + | chr6_1:9587348-9587367 | Msa0873950:CDS | 45.0% | |
GACTGTTCTTGTTGAGGCTA+CGG | + | chr6_1:9587655-9587674 | Msa0873950:intron | 45.0% | |
ACTGTTCTTGTTGAGGCTAC+GGG | + | chr6_1:9587656-9587675 | Msa0873950:intron | 45.0% | |
AGGGTCTGTCAGATATACCT+CGG | - | chr6_1:9587798-9587817 | None:intergenic | 45.0% | |
CAGTGTCTCTCCAAATCTCA+GGG | - | chr6_1:9588021-9588040 | None:intergenic | 45.0% | |
AGATTTGGAGAGACACTGGA+GGG | + | chr6_1:9588023-9588042 | Msa0873950:CDS | 45.0% | |
TGGAGGGAGAATTGATGCTT+TGG | + | chr6_1:9588039-9588058 | Msa0873950:CDS | 45.0% | |
CTATGTAAATTTCCCCCCCT+AGG | + | chr6_1:9588231-9588250 | Msa0873950:intron | 45.0% | |
TTCTACACCATACACCTAGG+GGG | - | chr6_1:9588248-9588267 | None:intergenic | 45.0% | |
GTTCTACACCATACACCTAG+GGG | - | chr6_1:9588249-9588268 | None:intergenic | 45.0% | |
GGTTCTACACCATACACCTA+GGG | - | chr6_1:9588250-9588269 | None:intergenic | 45.0% | |
! | TGGTTCTACACCATACACCT+AGG | - | chr6_1:9588251-9588270 | None:intergenic | 45.0% |
CATCTAGGAGATCAAGATCC+AGG | - | chr6_1:9588511-9588530 | None:intergenic | 45.0% | |
! | TGACAAAGCTTTGTCTCACC+AGG | + | chr6_1:9588746-9588765 | Msa0873950:intron | 45.0% |
GCAGCAGCTGCAATAAAACT+AGG | + | chr6_1:9589304-9589323 | Msa0873950:CDS | 45.0% | |
GGGAAGAGACAAGAAAATGC+AGG | + | chr6_1:9589325-9589344 | Msa0873950:CDS | 45.0% | |
TGCGTCGAATACACACACTA+AGG | - | chr6_1:9589377-9589396 | None:intergenic | 45.0% | |
CAAAATCGTTGTTGTGCAGG+TGG | + | chr6_1:9589499-9589518 | Msa0873950:intron | 45.0% | |
!! | CGCCTGATGGATTCAAAAAG+TGG | - | chr6_1:9589560-9589579 | None:intergenic | 45.0% |
!! | ATTTAATATTATTTAATTAC+AGG | + | chr6_1:9582516-9582535 | Msa0873950:intron | 5.0% |
!! | CAAAAATATTATTAATTAAA+TGG | - | chr6_1:9582733-9582752 | None:intergenic | 5.0% |
!!! | AATTTGAAATTTAAAAAATT+AGG | + | chr6_1:9585635-9585654 | Msa0873950:intron | 5.0% |
!!! | ATCTTTTTTTTTTTTTTTTT+TGG | - | chr6_1:9586569-9586588 | None:intergenic | 5.0% |
! | TCATCACTTTGGACTAGGGG+TGG | + | chr6_1:9582131-9582150 | Msa0873950:intron | 50.0% |
! | TTTGGACTAGGGGTGGCAAT+AGG | + | chr6_1:9582138-9582157 | Msa0873950:intron | 50.0% |
GTGGATGGATCGGATGGATA+TGG | - | chr6_1:9582175-9582194 | None:intergenic | 50.0% | |
GGGTGGCAAAATGGATGGAT+TGG | - | chr6_1:9583081-9583100 | None:intergenic | 50.0% | |
AGTAGGGGTGGCAAAATGGA+TGG | - | chr6_1:9583086-9583105 | None:intergenic | 50.0% | |
CCAAAGTAGGGGTGGCAAAA+TGG | - | chr6_1:9583090-9583109 | None:intergenic | 50.0% | |
! | CCATTTTGCCACCCCTACTT+TGG | + | chr6_1:9583087-9583106 | Msa0873950:intron | 50.0% |
TGTGAAGTCCAAAGTAGGGG+TGG | - | chr6_1:9583098-9583117 | None:intergenic | 50.0% | |
CACCAACCAAACTACCTACG+TGG | + | chr6_1:9583136-9583155 | Msa0873950:intron | 50.0% | |
TCCCACGTAGGTAGTTTGGT+TGG | - | chr6_1:9583141-9583160 | None:intergenic | 50.0% | |
CAAACATTCAGGTCCCACGT+AGG | - | chr6_1:9583153-9583172 | None:intergenic | 50.0% | |
GTCCTCATTGAGCCTACTAG+TGG | + | chr6_1:9583525-9583544 | Msa0873950:CDS | 50.0% | |
GAGCCTACTAGTGGAAACAC+TGG | + | chr6_1:9583534-9583553 | Msa0873950:CDS | 50.0% | |
GCATTCATGGCAGCTGCTAA+GGG | + | chr6_1:9583567-9583586 | Msa0873950:CDS | 50.0% | |
! | CTAACTCAGCACCGAAAGCA+CGG | - | chr6_1:9583650-9583669 | None:intergenic | 50.0% |
GCTCCTTTCATGCCTTTAGC+TGG | - | chr6_1:9583684-9583703 | None:intergenic | 50.0% | |
! | CCAGAGCTTTTCCAGATCTC+TGG | - | chr6_1:9583895-9583914 | None:intergenic | 50.0% |
CCAGAGATCTGGAAAAGCTC+TGG | + | chr6_1:9583892-9583911 | Msa0873950:CDS | 50.0% | |
! | GAGATCTGGAAAAGCTCTGG+TGG | + | chr6_1:9583895-9583914 | Msa0873950:CDS | 50.0% |
!! | GTTTCTGGTATAGGAACCGG+AGG | + | chr6_1:9583934-9583953 | Msa0873950:CDS | 50.0% |
AGCACCTGTTACTGTACCTC+CGG | - | chr6_1:9583953-9583972 | None:intergenic | 50.0% | |
!! | AGTAACAGGTGCTGGAAACC+TGG | + | chr6_1:9583960-9583979 | Msa0873950:CDS | 50.0% |
AATGACTCCCCGAATGGTGA+AGG | - | chr6_1:9584077-9584096 | None:intergenic | 50.0% | |
GACATGAATGACTCCCCGAA+TGG | - | chr6_1:9584083-9584102 | None:intergenic | 50.0% | |
CAAGGCCCTCATAAGATCCA+AGG | + | chr6_1:9584506-9584525 | Msa0873950:intron | 50.0% | |
TGAAGCCAGCACCAATTCCT+TGG | - | chr6_1:9584526-9584545 | None:intergenic | 50.0% | |
!! | ATTGGTGCTGGCTTCATTCC+TGG | + | chr6_1:9584530-9584549 | Msa0873950:CDS | 50.0% |
TGGCTTCATTCCTGGTGTTC+TGG | + | chr6_1:9584538-9584557 | Msa0873950:CDS | 50.0% | |
TACCGATGACCTCGTATTGC+AGG | + | chr6_1:9585080-9585099 | Msa0873950:intron | 50.0% | |
CACCTGCAATACGAGGTCAT+CGG | - | chr6_1:9585085-9585104 | None:intergenic | 50.0% | |
GATGACCTCGTATTGCAGGT+GGG | + | chr6_1:9585084-9585103 | Msa0873950:intron | 50.0% | |
ATGACCTCGTATTGCAGGTG+GGG | + | chr6_1:9585085-9585104 | Msa0873950:intron | 50.0% | |
ATATCCCCACCTGCAATACG+AGG | - | chr6_1:9585092-9585111 | None:intergenic | 50.0% | |
TTGCAGGTGGGGATATCATC+TGG | + | chr6_1:9585096-9585115 | Msa0873950:intron | 50.0% | |
AACCTTAATTGCAGCGGCTG+CGG | - | chr6_1:9585127-9585146 | None:intergenic | 50.0% | |
GCAAAGAAGCCGGAAAATGC+TGG | + | chr6_1:9585147-9585166 | Msa0873950:CDS | 50.0% | |
GGTAACGCTCTCCAAAGATC+GGG | - | chr6_1:9585369-9585388 | None:intergenic | 50.0% | |
ACCAAGGCAAATAGGAGAGC+CGG | - | chr6_1:9586753-9586772 | None:intergenic | 50.0% | |
CCTATCTTTGACACTGCAGC+AGG | - | chr6_1:9587181-9587200 | None:intergenic | 50.0% | |
CCTGCTGCAGTGTCAAAGAT+AGG | + | chr6_1:9587178-9587197 | Msa0873950:intron | 50.0% | |
GATCGATGCCAATCCTATGC+CGG | - | chr6_1:9587690-9587709 | None:intergenic | 50.0% | |
TATCTGACAGACCCTGCCAA+AGG | + | chr6_1:9587803-9587822 | Msa0873950:intron | 50.0% | |
CTCCATCAACTCCTTTGGCA+GGG | - | chr6_1:9587817-9587836 | None:intergenic | 50.0% | |
ACTCCATCAACTCCTTTGGC+AGG | - | chr6_1:9587818-9587837 | None:intergenic | 50.0% | |
CCAGTGTCTCTCCAAATCTC+AGG | - | chr6_1:9588022-9588041 | None:intergenic | 50.0% | |
CCTGAGATTTGGAGAGACAC+TGG | + | chr6_1:9588019-9588038 | Msa0873950:CDS | 50.0% | |
GAGATTTGGAGAGACACTGG+AGG | + | chr6_1:9588022-9588041 | Msa0873950:CDS | 50.0% | |
GATGCTTTGGTTGCAGGGAT+AGG | + | chr6_1:9588052-9588071 | Msa0873950:CDS | 50.0% | |
TTGGTTGCAGGGATAGGAAC+TGG | + | chr6_1:9588058-9588077 | Msa0873950:CDS | 50.0% | |
TGGTTGCAGGGATAGGAACT+GGG | + | chr6_1:9588059-9588078 | Msa0873950:CDS | 50.0% | |
GGAACTGGGGGAACAATAAC+AGG | + | chr6_1:9588073-9588092 | Msa0873950:CDS | 50.0% | |
GGGGAACAATAACAGGTGCT+GGG | + | chr6_1:9588080-9588099 | Msa0873950:CDS | 50.0% | |
AATTTCCCCCCCTAGGTGTA+TGG | + | chr6_1:9588238-9588257 | Msa0873950:intron | 50.0% | |
TCTACACCATACACCTAGGG+GGG | - | chr6_1:9588247-9588266 | None:intergenic | 50.0% | |
CGACACCATTACCGATACCT+TGG | - | chr6_1:9588478-9588497 | None:intergenic | 50.0% | |
AGATCAAGATCCAGGACAGG+GGG | - | chr6_1:9588503-9588522 | None:intergenic | 50.0% | |
GAGATCAAGATCCAGGACAG+GGG | - | chr6_1:9588504-9588523 | None:intergenic | 50.0% | |
GGAGATCAAGATCCAGGACA+GGG | - | chr6_1:9588505-9588524 | None:intergenic | 50.0% | |
AGGAGATCAAGATCCAGGAC+AGG | - | chr6_1:9588506-9588525 | None:intergenic | 50.0% | |
TGGATATGCATCAGGGCCAT+TGG | + | chr6_1:9589112-9589131 | Msa0873950:intron | 50.0% | |
TTCTTCAGCTTCACGCCTGA+TGG | - | chr6_1:9589573-9589592 | None:intergenic | 50.0% | |
! | TTACAGGTGGTGGTCAACGC+CGG | + | chr6_1:9582532-9582551 | Msa0873950:intron | 55.0% |
GGTCAACGCCGGAGTATAAC+CGG | + | chr6_1:9582543-9582562 | Msa0873950:intron | 55.0% | |
!! | GGCGTTGACCGGTTATACTC+CGG | - | chr6_1:9582554-9582573 | None:intergenic | 55.0% |
GGAGTATAACCGGTCAACGC+CGG | + | chr6_1:9582553-9582572 | Msa0873950:intron | 55.0% | |
CAGGTCCCACGTAGGTAGTT+TGG | - | chr6_1:9583145-9583164 | None:intergenic | 55.0% | |
GGCATTCATGGCAGCTGCTA+AGG | + | chr6_1:9583566-9583585 | Msa0873950:CDS | 55.0% | |
! | GGAACCGGAGGTACAGTAAC+AGG | + | chr6_1:9583946-9583965 | Msa0873950:CDS | 55.0% |
! | GGAGGTACAGTAACAGGTGC+TGG | + | chr6_1:9583952-9583971 | Msa0873950:CDS | 55.0% |
TGTGGCGTCACCAAGAAGAG+AGG | - | chr6_1:9584760-9584779 | None:intergenic | 55.0% | |
CGATGACCTCGTATTGCAGG+TGG | + | chr6_1:9585083-9585102 | Msa0873950:intron | 55.0% | |
GCTCTCCGCTTCTCGCTTTA+CGG | - | chr6_1:9585413-9585432 | None:intergenic | 55.0% | |
TGAAGTGGGATGGGAGCCAA+TGG | + | chr6_1:9585501-9585520 | Msa0873950:intron | 55.0% | |
CCAAGGCAAATAGGAGAGCC+GGG | - | chr6_1:9586752-9586771 | None:intergenic | 55.0% | |
GTTCTTGTTGAGGCTACGGG+TGG | + | chr6_1:9587659-9587678 | Msa0873950:intron | 55.0% | |
TGGCAACACCGGCATAGGAT+TGG | + | chr6_1:9587679-9587698 | Msa0873950:intron | 55.0% | |
GACCCTGCCAAAGGAGTTGA+TGG | + | chr6_1:9587812-9587831 | Msa0873950:intron | 55.0% | |
AGACCACTGGCCCTGAGATT+TGG | + | chr6_1:9588008-9588027 | Msa0873950:CDS | 55.0% | |
TCTCCAAATCTCAGGGCCAG+TGG | - | chr6_1:9588014-9588033 | None:intergenic | 55.0% | |
GGTTGCAGGGATAGGAACTG+GGG | + | chr6_1:9588060-9588079 | Msa0873950:CDS | 55.0% | |
GTTGCAGGGATAGGAACTGG+GGG | + | chr6_1:9588061-9588080 | Msa0873950:CDS | 55.0% | |
GGGGGAACAATAACAGGTGC+TGG | + | chr6_1:9588079-9588098 | Msa0873950:CDS | 55.0% | |
!! | AGGTGCTGGGAAGTTCCTCA+AGG | + | chr6_1:9588093-9588112 | Msa0873950:CDS | 55.0% |
CTACACCATACACCTAGGGG+GGG | - | chr6_1:9588246-9588265 | None:intergenic | 55.0% | |
AACCGTCGGTCGCCGGAAAA+TGG | + | chr6_1:9582612-9582631 | Msa0873950:intron | 60.0% | |
! | GACCATTTTCCGGCGACCGA+CGG | - | chr6_1:9582617-9582636 | None:intergenic | 60.0% |
GTCGGTCGCCGGAAAATGGT+CGG | + | chr6_1:9582616-9582635 | Msa0873950:intron | 60.0% | |
AGCAGTCAACACACCACCGC+CGG | - | chr6_1:9582693-9582712 | None:intergenic | 60.0% | |
TGCCGCAGCCGCTGCAATTA+AGG | + | chr6_1:9585122-9585141 | Msa0873950:CDS | 60.0% | |
CCCGGCTCTCCTATTTGCCT+TGG | + | chr6_1:9586749-9586768 | Msa0873950:intron | 60.0% | |
! | GCATCGATCGCAGCACTGAG+AGG | + | chr6_1:9587701-9587720 | Msa0873950:intron | 60.0% |
CGCATCACGGTGGTTCACGG+CGG | - | chr6_1:9582583-9582602 | None:intergenic | 65.0% | |
CGCCGTGAACCACCGTGATG+CGG | + | chr6_1:9582581-9582600 | Msa0873950:intron | 65.0% | |
CGCCGCATCACGGTGGTTCA+CGG | - | chr6_1:9582586-9582605 | None:intergenic | 65.0% | |
CGTGAACCACCGTGATGCGG+CGG | + | chr6_1:9582584-9582603 | Msa0873950:intron | 65.0% | |
! | GCGGCGGTCCGACCATTTTC+CGG | - | chr6_1:9582627-9582646 | None:intergenic | 65.0% |
GAGGCTACGGGTGGCAACAC+CGG | + | chr6_1:9587668-9587687 | Msa0873950:intron | 65.0% | |
ACGGGTGGCAACACCGGCAT+AGG | + | chr6_1:9587674-9587693 | Msa0873950:intron | 65.0% | |
ACTGCGAGCTTTCGGAGCCG+AGG | + | chr6_1:9587778-9587797 | Msa0873950:intron | 65.0% | |
!! | TGGTGTCGTTCCCCCTGTCC+TGG | + | chr6_1:9588490-9588509 | Msa0873950:CDS | 65.0% |
GGTGGTTCACGGCGGAGCTC+CGG | - | chr6_1:9582575-9582594 | None:intergenic | 70.0% | |
GAACCACCGTGATGCGGCGG+CGG | + | chr6_1:9582587-9582606 | Msa0873950:intron | 70.0% | |
GGTTGTCCGCCGCCGCATCA+CGG | - | chr6_1:9582596-9582615 | None:intergenic | 70.0% | |
ATGCGGCGGCGGACAACCGT+CGG | + | chr6_1:9582598-9582617 | Msa0873950:intron | 70.0% | |
! | GCGTTGACCACGGTGGCCTC+CGG | - | chr6_1:9582671-9582690 | None:intergenic | 70.0% |
GAGGCCACCGTGGTCAACGC+CGG | + | chr6_1:9582671-9582690 | Msa0873950:intron | 70.0% | |
!! | ACCACCGCCGGCGTTGACCA+CGG | - | chr6_1:9582681-9582700 | None:intergenic | 70.0% |
!! | GGCGGAGCTCCGGCGTTGAC+CGG | - | chr6_1:9582565-9582584 | None:intergenic | 75.0% |
TGTCCGCCGCCGCATCACGG+TGG | - | chr6_1:9582593-9582612 | None:intergenic | 75.0% | |
GGCGGACAACCGTCGGTCGC+CGG | + | chr6_1:9582605-9582624 | Msa0873950:intron | 75.0% | |
GCCACCGTGGTCAACGCCGG+CGG | + | chr6_1:9582674-9582693 | Msa0873950:intron | 75.0% | |
!! | ACCGCCGGCGTTGACCACGG+TGG | - | chr6_1:9582678-9582697 | None:intergenic | 75.0% |
ACCGTGGTCAACGCCGGCGG+TGG | + | chr6_1:9582677-9582696 | Msa0873950:intron | 75.0% | |
! | GTGGCCTCCGGCGACCCCCA+CGG | - | chr6_1:9582659-9582678 | None:intergenic | 80.0% |
! | ACCCCCACGGCGGCGCACGG+CGG | - | chr6_1:9582646-9582665 | None:intergenic | 85.0% |
! | GCGACCCCCACGGCGGCGCA+CGG | - | chr6_1:9582649-9582668 | None:intergenic | 85.0% |
! | TGCGCCGCCGTGGGGGTCGC+CGG | + | chr6_1:9582649-9582668 | Msa0873950:intron | 85.0% |
! | GCCTCCGGCGACCCCCACGG+CGG | - | chr6_1:9582656-9582675 | None:intergenic | 85.0% |
! | GGGGTCGCCGGAGGCCACCG+TGG | + | chr6_1:9582661-9582680 | Msa0873950:intron | 85.0% |
! | ACCGCCGCCGTGCGCCGCCG+TGG | + | chr6_1:9582639-9582658 | Msa0873950:intron | 90.0% |
! | CCCACGGCGGCGCACGGCGG+CGG | - | chr6_1:9582643-9582662 | None:intergenic | 90.0% |
! | CCGCCGCCGTGCGCCGCCGT+GGG | + | chr6_1:9582640-9582659 | Msa0873950:intron | 90.0% |
! | CGCCGCCGTGCGCCGCCGTG+GGG | + | chr6_1:9582641-9582660 | Msa0873950:intron | 90.0% |
! | GCCGCCGTGCGCCGCCGTGG+GGG | + | chr6_1:9582642-9582661 | Msa0873950:intron | 90.0% |
! | GCCGCCGTGGGGGTCGCCGG+AGG | + | chr6_1:9582652-9582671 | Msa0873950:intron | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 9581466 | 9589950 | 9581466 | ID=Msa0873950;Name=Msa0873950 |
chr6_1 | mRNA | 9581466 | 9589950 | 9581466 | ID=Msa0873950-mRNA-1;Parent=Msa0873950;Name=Msa0873950-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.64|0.66|1|0.71|0.73|15|322|462 |
chr6_1 | exon | 9581466 | 9581575 | 9581466 | ID=Msa0873950-mRNA-1:exon:2935;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9583206 | 9583266 | 9583206 | ID=Msa0873950-mRNA-1:exon:2936;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9583522 | 9583785 | 9583522 | ID=Msa0873950-mRNA-1:exon:2937;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9583871 | 9583981 | 9583871 | ID=Msa0873950-mRNA-1:exon:2938;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9584521 | 9584589 | 9584521 | ID=Msa0873950-mRNA-1:exon:2939;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9584958 | 9585017 | 9584958 | ID=Msa0873950-mRNA-1:exon:2940;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9585102 | 9585190 | 9585102 | ID=Msa0873950-mRNA-1:exon:2941;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9586878 | 9586935 | 9586878 | ID=Msa0873950-mRNA-1:exon:2942;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9587090 | 9587136 | 9587090 | ID=Msa0873950-mRNA-1:exon:2943;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9587312 | 9587369 | 9587312 | ID=Msa0873950-mRNA-1:exon:2944;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9587998 | 9588135 | 9587998 | ID=Msa0873950-mRNA-1:exon:2945;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9588253 | 9588304 | 9588253 | ID=Msa0873950-mRNA-1:exon:2946;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9588462 | 9588541 | 9588462 | ID=Msa0873950-mRNA-1:exon:2947;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9589280 | 9589360 | 9589280 | ID=Msa0873950-mRNA-1:exon:2948;Parent=Msa0873950-mRNA-1 |
chr6_1 | exon | 9589518 | 9589950 | 9589518 | ID=Msa0873950-mRNA-1:exon:2949;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9581466 | 9581575 | 9581466 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9583206 | 9583266 | 9583206 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9583522 | 9583785 | 9583522 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9583871 | 9583981 | 9583871 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9584521 | 9584589 | 9584521 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9584958 | 9585017 | 9584958 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9585102 | 9585190 | 9585102 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9586878 | 9586935 | 9586878 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9587090 | 9587136 | 9587090 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9587312 | 9587369 | 9587312 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9587998 | 9588135 | 9587998 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9588253 | 9588304 | 9588253 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9588462 | 9588541 | 9588462 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9589280 | 9589360 | 9589280 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | CDS | 9589518 | 9589628 | 9589518 | ID=Msa0873950-mRNA-1:cds;Parent=Msa0873950-mRNA-1 |
chr6_1 | three_prime_UTR | 9589629 | 9589950 | 9589629 | ID=Msa0873950-mRNA-1:three_prime_utr;Parent=Msa0873950-mRNA-1 |
Gene Sequence |
Protein sequence |