AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0648280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648280 MtrunA17_Chr4g0040231 97.263 475 12 1 1 474 1 475 0.0 948
Msa0648280 MtrunA17_Chr4g0040001 83.298 467 77 1 1 466 1 467 0.0 771
Msa0648280 MtrunA17_Chr4g0040221 80.591 474 88 2 1 474 1 470 0.0 756
Msa0648280 MtrunA17_Chr4g0040011 82.658 444 70 2 1 443 9 446 0.0 716
Msa0648280 MtrunA17_Chr4g0040261 65.517 464 155 3 5 467 37 496 0.0 617
Msa0648280 MtrunA17_Chr4g0040251 61.935 465 171 4 5 467 4 464 0.0 591
Msa0648280 MtrunA17_Chr4g0040271 64.524 420 143 4 5 423 4 418 0.0 557
Msa0648280 MtrunA17_Chr7g0217051 56.710 462 196 3 7 467 8 466 0.0 547
Msa0648280 MtrunA17_Chr7g0248011 45.798 476 248 5 2 474 3 471 1.67e-146 427
Msa0648280 MtrunA17_Chr6g0457271 50.704 355 173 2 67 420 5 358 4.32e-127 374
Msa0648280 MtrunA17_Chr6g0457281 48.464 293 144 3 87 375 1 290 3.50e-95 289
Msa0648280 MtrunA17_Chr1g0147071 26.608 451 293 9 10 437 10 445 7.46e-50 177
Msa0648280 MtrunA17_Chr5g0393471 30.100 299 198 7 169 462 43 335 2.68e-28 114
Msa0648280 MtrunA17_Chr6g0457291 49.296 71 36 0 398 468 1 71 2.30e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648280 AT3G49190.1 27.632 456 295 8 7 437 15 460 5.48e-55 192
Msa0648280 AT5G53390.1 29.228 479 304 15 9 466 14 478 7.60e-53 185
Msa0648280 AT3G49210.1 26.680 491 321 9 10 466 26 511 8.66e-49 175
Msa0648280 AT3G49200.1 26.106 452 305 9 10 437 26 472 4.46e-47 170
Msa0648280 AT2G38995.2 27.389 471 316 10 10 466 21 479 9.61e-47 169
Msa0648280 AT5G16350.3 28.054 442 290 14 7 437 4 428 1.08e-46 168
Msa0648280 AT1G72110.1 26.752 471 322 8 7 464 9 469 3.10e-46 167
Msa0648280 AT5G12420.1 26.096 456 302 12 5 437 3 446 1.77e-45 165
Msa0648280 AT5G22490.1 27.536 483 303 15 11 466 12 474 2.70e-45 165
Msa0648280 AT5G16350.1 27.233 459 292 14 7 437 4 448 1.07e-44 163
Msa0648280 AT5G12420.2 26.636 428 279 12 5 409 3 418 2.76e-44 162
Msa0648280 AT5G37300.1 27.791 421 281 9 56 463 60 470 2.44e-43 159
Msa0648280 AT5G37300.4 27.791 421 281 9 56 463 78 488 3.75e-43 159
Msa0648280 AT2G38995.3 26.214 412 285 6 66 466 7 410 3.65e-41 152
Msa0648280 AT1G72110.2 25.690 471 318 9 7 464 9 460 3.67e-41 153
Msa0648280 AT5G53380.1 26.269 453 294 13 9 437 8 444 3.98e-39 148
Msa0648280 AT5G16350.2 28.212 397 243 14 7 375 4 386 4.56e-39 146
Msa0648280 AT2G38995.4 26.099 364 253 4 66 420 7 363 3.47e-37 140
Msa0648280 AT5G22490.2 28.571 392 233 15 11 375 12 383 6.76e-35 134
Msa0648280 AT3G49210.2 25.854 410 266 8 10 386 26 430 3.03e-34 133
Msa0648280 AT5G37300.2 28.012 332 217 8 56 375 78 399 3.26e-32 127
Msa0648280 AT5G37300.3 28.689 244 163 5 56 295 78 314 2.97e-25 106
Msa0648280 AT2G38995.1 24.775 222 152 4 256 466 72 289 8.17e-15 75.5
Msa0648280 AT2G43255.2 23.671 207 146 4 268 466 8 210 3.39e-13 69.3
Msa0648280 AT2G43255.1 23.757 181 132 3 288 466 33 209 1.55e-12 67.4

Find 117 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCTATGAATCCCTTTA+AGG 0.070555 4_3:-54787145 None:intergenic
CATGATGAATTTATGGTTTC+AGG 0.102874 4_3:-54783251 None:intergenic
TAATTCACATGATGAATTTA+TGG 0.119469 4_3:-54783258 None:intergenic
TTTGTTTCCTCTTTCTTATT+TGG 0.166825 4_3:+54787700 Msa0648280:three_prime_UTR
ATTTATGGTTTCAGGAAATA+TGG 0.171107 4_3:-54783243 None:intergenic
TTTAGCTCCATATCAGATTT+TGG 0.176719 4_3:+54783584 Msa0648280:CDS
TTGGCAAATCATCCAGTAAA+TGG 0.216729 4_3:+54784867 Msa0648280:CDS
CATAGCTTTGCTCTTGGATT+TGG 0.219486 4_3:+54784550 Msa0648280:CDS
AATCACCTTGAAAACCTTAA+AGG 0.243906 4_3:+54787131 Msa0648280:CDS
GTTATGTTTGACAAGATAAA+AGG 0.245138 4_3:-54783686 None:intergenic
AACATAATGGACAAATTCTT+TGG 0.247013 4_3:+54782807 Msa0648280:exon
CCAACCCTCTTGAGTTTGTT+TGG 0.247573 4_3:+54784477 Msa0648280:CDS
CCTTCATATCCTGACCTTAT+AGG 0.252137 4_3:-54783650 None:intergenic
CGATAAAGAGATAAGGAATT+TGG 0.256448 4_3:-54787733 None:intergenic
CAAATTCCTTATCTCTTTAT+CGG 0.271752 4_3:+54787734 Msa0648280:three_prime_UTR
ATGATTCAGTTTGAATATTA+TGG 0.271789 4_3:-54783396 None:intergenic
ATTACGGGAATGATCTTCTA+TGG 0.273585 4_3:+54784257 Msa0648280:CDS
GGAATCTTTAAGTGTTCTTC+AGG 0.290094 4_3:-54783221 None:intergenic
GAGGAGAAGCGTGGGTTGAT+AGG 0.299249 4_3:-54782969 None:intergenic
AAAGCGGTGGCACAATTATT+AGG 0.306594 4_3:-54787644 None:intergenic
GTGAAACACAATCCATTTAC+TGG 0.310704 4_3:-54784879 None:intergenic
CCCACGCTTCTCCTCTATTA+TGG 0.313803 4_3:+54782977 Msa0648280:CDS
AACCAGAGTCTAAAGGTCTA+TGG 0.314366 4_3:+54784396 Msa0648280:CDS
ATATTTGATTGGCTCATCTT+AGG 0.322200 4_3:-54784452 None:intergenic
TCATCAAGGTTTGAGGATTA+TGG 0.322273 4_3:-54787787 None:intergenic
GCTTGATCCAAAATCTGATA+TGG 0.323604 4_3:-54783591 None:intergenic
AAAATAATCTATAACACAAC+TGG 0.341009 4_3:+54784792 Msa0648280:CDS
GACTATAAACGACGTGATTA+CGG 0.342881 4_3:+54784241 Msa0648280:intron
GATTGGCTCATCTTAGGTAT+AGG 0.345904 4_3:-54784446 None:intergenic
ATGCTCAACACAAGAAATAT+TGG 0.356933 4_3:+54784344 Msa0648280:CDS
TTTGCATTTCCTTCACTGAT+TGG 0.357490 4_3:-54784373 None:intergenic
TTAGCTGTTATAACCATGTT+TGG 0.365166 4_3:+54787531 Msa0648280:three_prime_UTR
ACTATAAACGACGTGATTAC+GGG 0.373686 4_3:+54784242 Msa0648280:CDS
ATCACCTTGAAAACCTTAAA+GGG 0.380979 4_3:+54787132 Msa0648280:CDS
TATTAGGAATATAAATAGAT+TGG 0.382061 4_3:-54787628 None:intergenic
ACCACAAAATAAACCACTTT+GGG 0.382385 4_3:+54783331 Msa0648280:CDS
TCCTGGATCCTTAGCTTCAT+AGG 0.383949 4_3:-54787265 None:intergenic
TTTATGGTTTCAGGAAATAT+GGG 0.386290 4_3:-54783242 None:intergenic
TATGTAACAAGTATTCTAAA+TGG 0.393222 4_3:+54783302 Msa0648280:CDS
TCCCCACTAATCGTAATTCC+TGG 0.399259 4_3:-54787282 None:intergenic
AGGAGAAGCGTGGGTTGATA+GGG 0.404776 4_3:-54782968 None:intergenic
TTATCTCATAGCTTTGCTCT+TGG 0.413063 4_3:+54784544 Msa0648280:CDS
ACAGCTAATCTCCTAAATTC+TGG 0.414195 4_3:-54787516 None:intergenic
TCCTACACACCACAACATAA+TGG 0.415578 4_3:+54782794 Msa0648280:exon
ACGAAGATGGTAAGATGAAA+TGG 0.422013 4_3:+54783180 Msa0648280:CDS
GATTTGGAAATGAAGTTAAG+AGG 0.426420 4_3:+54784566 Msa0648280:CDS
AAGATGACAAAACACCTATA+AGG 0.442261 4_3:+54783636 Msa0648280:CDS
GTTCTTATGTCAAACATTGT+AGG 0.444388 4_3:+54784825 Msa0648280:CDS
GCCAAAGTCATCTTCTCTAC+TGG 0.454580 4_3:-54784849 None:intergenic
TTGTGTTTCACCATGACAAA+TGG 0.465164 4_3:+54784891 Msa0648280:CDS
CACCACAAAATAAACCACTT+TGG 0.465863 4_3:+54783330 Msa0648280:CDS
ACCTATGAAGCTAAGGATCC+AGG 0.467106 4_3:+54787264 Msa0648280:three_prime_UTR
GAGGGTTGGAGATATTTGAT+TGG 0.467930 4_3:-54784463 None:intergenic
GAGATAAGGAATTTGGAAGA+TGG 0.468178 4_3:-54787726 None:intergenic
GGAGATCTCCATAGCTGCTT+CGG 0.469892 4_3:-54787211 None:intergenic
ACCAGAGTCTAAAGGTCTAT+GGG 0.476949 4_3:+54784397 Msa0648280:CDS
GAATGATCTTCTATGGGATT+AGG 0.478266 4_3:+54784264 Msa0648280:CDS
CTAGAACCGATAAAGAGATA+AGG 0.481816 4_3:-54787740 None:intergenic
CCCCATAGACCTTTAGACTC+TGG 0.484139 4_3:-54784398 None:intergenic
GTGCAAGCTGCATTGGTTGT+TGG 0.485670 4_3:-54783374 None:intergenic
ATGGCTAGTGAATTATCAAA+TGG 0.490172 4_3:-54782921 None:intergenic
AGTCATATCCGAAGCAGCTA+TGG 0.494801 4_3:+54787203 Msa0648280:CDS
TTCTTATGTCAAACATTGTA+GGG 0.496830 4_3:+54784826 Msa0648280:CDS
TGGTAAGATGAAATGGCAAA+AGG 0.497110 4_3:+54783187 Msa0648280:CDS
GCAAAATACCTATGAAGCTA+AGG 0.498790 4_3:+54787257 Msa0648280:three_prime_UTR
AATATATAGAACCATAATAG+AGG 0.500079 4_3:-54782988 None:intergenic
GATCCAGGAATTACGATTAG+TGG 0.501913 4_3:+54787279 Msa0648280:three_prime_UTR
CTATGGGATTAGGCTATACA+TGG 0.512779 4_3:+54784274 Msa0648280:CDS
AAAGGAGTTAAATCAAAGCT+TGG 0.513777 4_3:+54783728 Msa0648280:CDS
ATTTGGAAATGAAGTTAAGA+GGG 0.515630 4_3:+54784567 Msa0648280:CDS
ATCCAGGAATTACGATTAGT+GGG 0.518243 4_3:+54787280 Msa0648280:three_prime_UTR
GGAAAAGACAGAGGTAGAGA+AGG 0.520075 4_3:-54783482 None:intergenic
AACACAATCGAGTAAAATCA+TGG 0.522028 4_3:-54787460 None:intergenic
TATTATGGTGCAAGCTGCAT+TGG 0.522660 4_3:-54783381 None:intergenic
GACAAAACACCTATAAGGTC+AGG 0.527058 4_3:+54783641 Msa0648280:CDS
CCTATAAGGTCAGGATATGA+AGG 0.528184 4_3:+54783650 Msa0648280:CDS
TATTGTCCATGAGGACTCAC+TGG 0.534626 4_3:-54782843 None:intergenic
TGAAGAACATAACCTTGAGT+TGG 0.543885 4_3:-54787676 None:intergenic
ATAATATGAATTTCCCAAAG+TGG 0.544140 4_3:-54783344 None:intergenic
GACATCTTTGAGCAAAGGTA+TGG 0.545080 4_3:-54782940 None:intergenic
ATGGTTTCCAAATAAGAAAG+AGG 0.550370 4_3:-54787707 None:intergenic
CAAGAGCCAGTGAGTCCTCA+TGG 0.550809 4_3:+54782837 Msa0648280:CDS
GCCAGTAGAGAAGATGACTT+TGG 0.551665 4_3:+54784848 Msa0648280:CDS
CCAAACAAACTCAAGAGGGT+TGG 0.557987 4_3:-54784477 None:intergenic
TTACGGGAATGATCTTCTAT+GGG 0.560045 4_3:+54784258 Msa0648280:CDS
AGAGTGCTCATCAAGGTTTG+AGG 0.568435 4_3:-54787794 None:intergenic
TTATCTCTTGATCAAATCAA+AGG 0.571391 4_3:+54783710 Msa0648280:CDS
TCCATTATGTTGTGGTGTGT+AGG 0.572217 4_3:-54782795 None:intergenic
TACACTGGATAAAGTGTAGT+GGG 0.577853 4_3:-54787585 None:intergenic
CTCAACACAAGAAATATTGG+AGG 0.579193 4_3:+54784347 Msa0648280:CDS
TTCAAACTGAATCATGCACT+TGG 0.586294 4_3:+54783404 Msa0648280:CDS
TGAAAAGAGAGTGCTCATCA+AGG 0.588103 4_3:-54787801 None:intergenic
TACCTCAGGTCCATTTGTCA+TGG 0.598891 4_3:-54784901 None:intergenic
CTGAATCATGCACTTGGTGA+TGG 0.599550 4_3:+54783410 Msa0648280:CDS
GATCTATCGTAAGCCAAACA+TGG 0.600662 4_3:-54787544 None:intergenic
TCTAATTGTGGTCTTTGTGA+AGG 0.603367 4_3:-54783503 None:intergenic
GCACAGGTAAAAGACGAAGA+TGG 0.604966 4_3:+54783167 Msa0648280:intron
ATGAAGACATCTTTGAGCAA+AGG 0.607249 4_3:-54782945 None:intergenic
CCAGAGTCTAAAGGTCTATG+GGG 0.610837 4_3:+54784398 Msa0648280:CDS
AATGAAGTTAAGAGGGTCTG+AGG 0.613338 4_3:+54784574 Msa0648280:CDS
AACATCAAATTCCACAGCGG+TGG 0.618411 4_3:+54784319 Msa0648280:CDS
AAATAATCTATAACACAACT+GGG 0.623010 4_3:+54784793 Msa0648280:CDS
GTATTCCAAACAAACTCAAG+AGG 0.625691 4_3:-54784482 None:intergenic
TATTCCAAACAAACTCAAGA+GGG 0.627200 4_3:-54784481 None:intergenic
CCATAATAGAGGAGAAGCGT+GGG 0.630256 4_3:-54782977 None:intergenic
AGAATTTGTCCATTATGTTG+TGG 0.632689 4_3:-54782803 None:intergenic
ACCATAATAGAGGAGAAGCG+TGG 0.641346 4_3:-54782978 None:intergenic
TGGAGGTTACCAATCAGTGA+AGG 0.641441 4_3:+54784364 Msa0648280:CDS
CACCATGACAAATGGACCTG+AGG 0.647576 4_3:+54784899 Msa0648280:CDS
AGTTAAATCAAAGCTTGGAG+TGG 0.648779 4_3:+54783733 Msa0648280:CDS
ATACTCGTGAACTAATCAAG+AGG 0.649765 4_3:+54784501 Msa0648280:CDS
TTACACTGGATAAAGTGTAG+TGG 0.660300 4_3:-54787586 None:intergenic
CTGTTGAAATATTGTCCATG+AGG 0.678022 4_3:-54782852 None:intergenic
CAGAGTCTAAAGGTCTATGG+GGG 0.681142 4_3:+54784399 Msa0648280:CDS
TCCAGGAATTACGATTAGTG+GGG 0.689537 4_3:+54787281 Msa0648280:three_prime_UTR
CTTTGTGAAGGAAAAGACAG+AGG 0.693859 4_3:-54783491 None:intergenic
GTTGAGCATTACCACCGCTG+TGG 0.706678 4_3:-54784330 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTAATTAAAATTTGGT+AGG - chr4_3:54783047-54783066 None:intergenic 10.0%
!!! ACCAAATTTTAATTAATATA+AGG + chr4_3:54783047-54783066 Msa0648280:intron 10.0%
!!! ATCATTAATTATTTTATTCA+CGG + chr4_3:54783131-54783150 Msa0648280:intron 10.0%
!!! TAGATTATAAAATTAGATTT+TGG + chr4_3:54783860-54783879 Msa0648280:intron 10.0%
!! AACAAGAAAAAAATTATTTA+CGG - chr4_3:54785310-54785329 None:intergenic 10.0%
!!! TTTAATTAAATTTTTATGTC+GGG + chr4_3:54785626-54785645 Msa0648280:intron 10.0%
!!! TTATTAAAATTAAAAGTGTT+TGG + chr4_3:54785765-54785784 Msa0648280:intron 10.0%
!!! CATAAATACATTTATAATTT+TGG - chr4_3:54785929-54785948 None:intergenic 10.0%
!!! TATACTTTTTTTTTTTTTGA+AGG - chr4_3:54786243-54786262 None:intergenic 10.0%
!!! ATAATTTGTTAAATATGATA+TGG - chr4_3:54786869-54786888 None:intergenic 10.0%
!!! TTTTATAATTCGTTAAATAT+AGG - chr4_3:54786919-54786938 None:intergenic 10.0%
!! GCCTTATATTAATTAAAATT+TGG - chr4_3:54783051-54783070 None:intergenic 15.0%
!!! TTAATTAATATAAGGCATTA+AGG + chr4_3:54783055-54783074 Msa0648280:intron 15.0%
!!! CTTTTATAATCTAACTTAAT+TGG - chr4_3:54783779-54783798 None:intergenic 15.0%
!!! AAAATAGTGTATTTTTTCAT+CGG - chr4_3:54784078-54784097 None:intergenic 15.0%
!! TTAACTCTTTATATTGTTAT+TGG + chr4_3:54784149-54784168 Msa0648280:intron 15.0%
!! ATAAATATATCATTGGATTA+AGG + chr4_3:54784187-54784206 Msa0648280:intron 15.0%
!! TTAATTATGGCATATATAAA+TGG + chr4_3:54784214-54784233 Msa0648280:intron 15.0%
!!! ATGAATGAAAATAAAGTTTT+AGG - chr4_3:54784629-54784648 None:intergenic 15.0%
!!! ATTAATGTTCTCTATTTTAT+TGG + chr4_3:54784747-54784766 Msa0648280:intron 15.0%
!!! TTAATGTTCTCTATTTTATT+GGG + chr4_3:54784748-54784767 Msa0648280:intron 15.0%
!! AAAAATAATATATATACCTC+AGG - chr4_3:54784918-54784937 None:intergenic 15.0%
!! AATGAATGTTAGAAAATAAA+AGG - chr4_3:54785173-54785192 None:intergenic 15.0%
!!! TTTCTTGTTTATATTTGAAT+TGG + chr4_3:54785321-54785340 Msa0648280:intron 15.0%
!!! AATCATGAACTTTTTTTTTT+TGG + chr4_3:54785441-54785460 Msa0648280:intron 15.0%
!! TAACTATAAAATGACATAAA+AGG + chr4_3:54785813-54785832 Msa0648280:intron 15.0%
!!! GAAAATATTACTGATTATAT+AGG - chr4_3:54786123-54786142 None:intergenic 15.0%
!! AATTAAGAAAAGGTTAAAAT+TGG + chr4_3:54786370-54786389 Msa0648280:intron 15.0%
!!! TAATATGTACCTTTTAAAAA+TGG + chr4_3:54786699-54786718 Msa0648280:intron 15.0%
!!! TTAAATATAGGTGTTATTTA+TGG - chr4_3:54786907-54786926 None:intergenic 15.0%
!!! ATTTTGCAATTAATTTTTTG+TGG - chr4_3:54787244-54787263 None:intergenic 15.0%
!!! TTGGTTAGTTAAAAATATTA+GGG - chr4_3:54787612-54787631 None:intergenic 15.0%
!!! ATTGGTTAGTTAAAAATATT+AGG - chr4_3:54787613-54787632 None:intergenic 15.0%
!! TATTAGGAATATAAATAGAT+TGG - chr4_3:54787631-54787650 None:intergenic 15.0%
!! AATATATAGAACCATAATAG+AGG - chr4_3:54782991-54783010 None:intergenic 20.0%
!! GTAAAGTAATTAATGAAGTA+TGG - chr4_3:54783018-54783037 None:intergenic 20.0%
!! TAATTCACATGATGAATTTA+TGG - chr4_3:54783261-54783280 None:intergenic 20.0%
!! TATGTAACAAGTATTCTAAA+TGG + chr4_3:54783302-54783321 Msa0648280:CDS 20.0%
!! ATGATTCAGTTTGAATATTA+TGG - chr4_3:54783399-54783418 None:intergenic 20.0%
!! AAAATAATCTATAACACAAC+TGG + chr4_3:54784792-54784811 Msa0648280:CDS 20.0%
!! AAATAATCTATAACACAACT+GGG + chr4_3:54784793-54784812 Msa0648280:CDS 20.0%
!! CTAAATATCATTGTTTGAAA+AGG - chr4_3:54785147-54785166 None:intergenic 20.0%
!! ATTGATGTGATAAATATGAT+AGG - chr4_3:54785243-54785262 None:intergenic 20.0%
!!! TTTGATTTTCAACAAAATCA+CGG - chr4_3:54785375-54785394 None:intergenic 20.0%
!! TATGTCATTACAAAGAAATA+GGG + chr4_3:54786185-54786204 Msa0648280:intron 20.0%
!! AAATATACACAAAAACCAAA+GGG - chr4_3:54786579-54786598 None:intergenic 20.0%
!! AAAATATACACAAAAACCAA+AGG - chr4_3:54786580-54786599 None:intergenic 20.0%
!!! ACTTTTTGACCATTTTTAAA+AGG - chr4_3:54786711-54786730 None:intergenic 20.0%
!!! ATTGACTCTTCTATTTTAAT+TGG - chr4_3:54786808-54786827 None:intergenic 20.0%
!! ATATGATATGGTATTTGAAT+AGG - chr4_3:54786857-54786876 None:intergenic 20.0%
!!! TTAATTTTTTGTGGATATCT+CGG - chr4_3:54787235-54787254 None:intergenic 20.0%
!!! AACATAATGGACAAATTCTT+TGG + chr4_3:54782807-54782826 Msa0648280:exon 25.0%
!!! AAGGTCAATTTTGATTATTG+AGG - chr4_3:54783106-54783125 None:intergenic 25.0%
! TTTATGGTTTCAGGAAATAT+GGG - chr4_3:54783245-54783264 None:intergenic 25.0%
! ATTTATGGTTTCAGGAAATA+TGG - chr4_3:54783246-54783265 None:intergenic 25.0%
! ATAATATGAATTTCCCAAAG+TGG - chr4_3:54783347-54783366 None:intergenic 25.0%
!!! GCATATTTTGAATCTAATTG+TGG - chr4_3:54783518-54783537 None:intergenic 25.0%
! GTTATGTTTGACAAGATAAA+AGG - chr4_3:54783689-54783708 None:intergenic 25.0%
! TTATCTCTTGATCAAATCAA+AGG + chr4_3:54783710-54783729 Msa0648280:CDS 25.0%
!! TCTAACTTAATTGGTCTAAA+TGG - chr4_3:54783770-54783789 None:intergenic 25.0%
! AAAGTACAAAATTGCTATGT+AGG + chr4_3:54783795-54783814 Msa0648280:intron 25.0%
!!! GTTTGTATAGTTCTAAAGAA+AGG + chr4_3:54783900-54783919 Msa0648280:intron 25.0%
!! GGATTAAGGTTGATTAATTA+TGG + chr4_3:54784201-54784220 Msa0648280:intron 25.0%
! ATTTGGAAATGAAGTTAAGA+GGG + chr4_3:54784567-54784586 Msa0648280:CDS 25.0%
!!! AAAATAAAGTTTTAGGTGAG+TGG - chr4_3:54784622-54784641 None:intergenic 25.0%
! AGAAGCTCAAAACTAAATAA+TGG - chr4_3:54784720-54784739 None:intergenic 25.0%
! TTCTTATGTCAAACATTGTA+GGG + chr4_3:54784826-54784845 Msa0648280:CDS 25.0%
! ACAGGGATATATATAAATTG+TGG - chr4_3:54785201-54785220 None:intergenic 25.0%
! ATGTGATAAATATGATAGGT+GGG - chr4_3:54785239-54785258 None:intergenic 25.0%
! GAATGATTTAGTCAAACTAA+CGG + chr4_3:54785411-54785430 Msa0648280:intron 25.0%
!!! TGAACTTTTTTTTTTTGGAG+AGG + chr4_3:54785446-54785465 Msa0648280:intron 25.0%
!!! TTTTGGCTTGAAATTTTCTT+TGG + chr4_3:54785511-54785530 Msa0648280:intron 25.0%
! CTATGTCATTACAAAGAAAT+AGG + chr4_3:54786184-54786203 Msa0648280:intron 25.0%
! CTGTTCTATACTTAGTAATT+AGG - chr4_3:54786217-54786236 None:intergenic 25.0%
! GAAAATTTAAAAAGCCAACA+TGG + chr4_3:54786285-54786304 Msa0648280:intron 25.0%
! CACTTAGAGATAAATACATA+TGG + chr4_3:54786642-54786661 Msa0648280:intron 25.0%
! AAAACACTTCTTTATATGCT+AGG + chr4_3:54787006-54787025 Msa0648280:intron 25.0%
! AAACACTTCTTTATATGCTA+GGG + chr4_3:54787007-54787026 Msa0648280:intron 25.0%
! AAAACTTCAAAAACGTAAAG+AGG - chr4_3:54787340-54787359 None:intergenic 25.0%
!! TTTTCTTTAGCAAATATGCA+TGG + chr4_3:54787356-54787375 Msa0648280:three_prime_UTR 25.0%
! TAAAAATATTAGGGTTACAC+TGG - chr4_3:54787603-54787622 None:intergenic 25.0%
! TTTGTTTCCTCTTTCTTATT+TGG + chr4_3:54787700-54787719 Msa0648280:three_prime_UTR 25.0%
! CAAATTCCTTATCTCTTTAT+CGG + chr4_3:54787734-54787753 Msa0648280:three_prime_UTR 25.0%
AGAATTTGTCCATTATGTTG+TGG - chr4_3:54782806-54782825 None:intergenic 30.0%
! GTGATGTGTTCATATGTTTT+TGG + chr4_3:54782879-54782898 Msa0648280:CDS 30.0%
!!! TTCATATGTTTTTGGCTTTC+TGG + chr4_3:54782887-54782906 Msa0648280:CDS 30.0%
ATGGCTAGTGAATTATCAAA+TGG - chr4_3:54782924-54782943 None:intergenic 30.0%
CATGATGAATTTATGGTTTC+AGG - chr4_3:54783254-54783273 None:intergenic 30.0%
ACCACAAAATAAACCACTTT+GGG + chr4_3:54783331-54783350 Msa0648280:CDS 30.0%
ATCTGATATGGAGCTAAAAA+AGG - chr4_3:54783582-54783601 None:intergenic 30.0%
!! TTTAGCTCCATATCAGATTT+TGG + chr4_3:54783584-54783603 Msa0648280:CDS 30.0%
AAGATGACAAAACACCTATA+AGG + chr4_3:54783636-54783655 Msa0648280:CDS 30.0%
AAAGGAGTTAAATCAAAGCT+TGG + chr4_3:54783728-54783747 Msa0648280:CDS 30.0%
AAAAACATCAAATTCCACAG+CGG + chr4_3:54784316-54784335 Msa0648280:CDS 30.0%
ATGCTCAACACAAGAAATAT+TGG + chr4_3:54784344-54784363 Msa0648280:CDS 30.0%
! ATATTTGATTGGCTCATCTT+AGG - chr4_3:54784455-54784474 None:intergenic 30.0%
TATTCCAAACAAACTCAAGA+GGG - chr4_3:54784484-54784503 None:intergenic 30.0%
GATTTGGAAATGAAGTTAAG+AGG + chr4_3:54784566-54784585 Msa0648280:CDS 30.0%
! TTTTATTGGGTTTGTGTTTC+AGG + chr4_3:54784761-54784780 Msa0648280:intron 30.0%
GTTCTTATGTCAAACATTGT+AGG + chr4_3:54784825-54784844 Msa0648280:CDS 30.0%
GGTTATATAGTTGGAAAACA+GGG - chr4_3:54785218-54785237 None:intergenic 30.0%
GATGTGATAAATATGATAGG+TGG - chr4_3:54785240-54785259 None:intergenic 30.0%
TCTCTCTAATAGTATACACA+AGG + chr4_3:54785273-54785292 Msa0648280:intron 30.0%
! ATCTTACTCGTGTTCTATTT+TGG + chr4_3:54785494-54785513 Msa0648280:intron 30.0%
ATATATAAGTGTGTGATGTG+AGG - chr4_3:54785576-54785595 None:intergenic 30.0%
TAGGTTTGTCAATGTACAAT+TGG - chr4_3:54786104-54786123 None:intergenic 30.0%
CTATAAGCTAAAAAGCTACT+TGG + chr4_3:54786409-54786428 Msa0648280:intron 30.0%
AATCACCTTGAAAACCTTAA+AGG + chr4_3:54787131-54787150 Msa0648280:CDS 30.0%
ATCACCTTGAAAACCTTAAA+GGG + chr4_3:54787132-54787151 Msa0648280:CDS 30.0%
TTCATCTATGAATCCCTTTA+AGG - chr4_3:54787148-54787167 None:intergenic 30.0%
AACACAATCGAGTAAAATCA+TGG - chr4_3:54787463-54787482 None:intergenic 30.0%
! TTTTCTCTTCACCAGAATTT+AGG + chr4_3:54787505-54787524 Msa0648280:three_prime_UTR 30.0%
TTAGCTGTTATAACCATGTT+TGG + chr4_3:54787531-54787550 Msa0648280:three_prime_UTR 30.0%
!!! TTTTTAGCTATTCCAACTCA+AGG + chr4_3:54787664-54787683 Msa0648280:three_prime_UTR 30.0%
ATGGTTTCCAAATAAGAAAG+AGG - chr4_3:54787710-54787729 None:intergenic 30.0%
CGATAAAGAGATAAGGAATT+TGG - chr4_3:54787736-54787755 None:intergenic 30.0%
CTGTTGAAATATTGTCCATG+AGG - chr4_3:54782855-54782874 None:intergenic 35.0%
ATGAAGACATCTTTGAGCAA+AGG - chr4_3:54782948-54782967 None:intergenic 35.0%
!! CGGCTTTAATTAATTTGCAC+AGG + chr4_3:54783151-54783170 Msa0648280:intron 35.0%
ACGAAGATGGTAAGATGAAA+TGG + chr4_3:54783180-54783199 Msa0648280:CDS 35.0%
TGGTAAGATGAAATGGCAAA+AGG + chr4_3:54783187-54783206 Msa0648280:CDS 35.0%
GGAATCTTTAAGTGTTCTTC+AGG - chr4_3:54783224-54783243 None:intergenic 35.0%
CACCACAAAATAAACCACTT+TGG + chr4_3:54783330-54783349 Msa0648280:CDS 35.0%
!!! TCCCAAAGTGGTTTATTTTG+TGG - chr4_3:54783335-54783354 None:intergenic 35.0%
TTCAAACTGAATCATGCACT+TGG + chr4_3:54783404-54783423 Msa0648280:CDS 35.0%
TCTAATTGTGGTCTTTGTGA+AGG - chr4_3:54783506-54783525 None:intergenic 35.0%
GCTTGATCCAAAATCTGATA+TGG - chr4_3:54783594-54783613 None:intergenic 35.0%
AGTTAAATCAAAGCTTGGAG+TGG + chr4_3:54783733-54783752 Msa0648280:CDS 35.0%
AAGATAAGATGGTCCTTACA+TGG - chr4_3:54784003-54784022 None:intergenic 35.0%
TCAACCACATGAAGATAAGA+TGG - chr4_3:54784014-54784033 None:intergenic 35.0%
GACTATAAACGACGTGATTA+CGG + chr4_3:54784241-54784260 Msa0648280:intron 35.0%
ACTATAAACGACGTGATTAC+GGG + chr4_3:54784242-54784261 Msa0648280:CDS 35.0%
ATTACGGGAATGATCTTCTA+TGG + chr4_3:54784257-54784276 Msa0648280:CDS 35.0%
TTACGGGAATGATCTTCTAT+GGG + chr4_3:54784258-54784277 Msa0648280:CDS 35.0%
GAATGATCTTCTATGGGATT+AGG + chr4_3:54784264-54784283 Msa0648280:CDS 35.0%
CTCAACACAAGAAATATTGG+AGG + chr4_3:54784347-54784366 Msa0648280:CDS 35.0%
TTTGCATTTCCTTCACTGAT+TGG - chr4_3:54784376-54784395 None:intergenic 35.0%
ATGCAAAAACCAGAGTCTAA+AGG + chr4_3:54784389-54784408 Msa0648280:CDS 35.0%
GTATTCCAAACAAACTCAAG+AGG - chr4_3:54784485-54784504 None:intergenic 35.0%
ATACTCGTGAACTAATCAAG+AGG + chr4_3:54784501-54784520 Msa0648280:CDS 35.0%
! TTATCTCATAGCTTTGCTCT+TGG + chr4_3:54784544-54784563 Msa0648280:CDS 35.0%
TTGGCAAATCATCCAGTAAA+TGG + chr4_3:54784867-54784886 Msa0648280:CDS 35.0%
GTGAAACACAATCCATTTAC+TGG - chr4_3:54784882-54784901 None:intergenic 35.0%
TTGTGTTTCACCATGACAAA+TGG + chr4_3:54784891-54784910 Msa0648280:CDS 35.0%
GGGTTATATAGTTGGAAAAC+AGG - chr4_3:54785219-54785238 None:intergenic 35.0%
!! TGATAGGTGGGTTATATAGT+TGG - chr4_3:54785227-54785246 None:intergenic 35.0%
! ATTTTTATGTCGGGTGTGTT+TGG + chr4_3:54785635-54785654 Msa0648280:intron 35.0%
ATAGCAATCTGATAGAAGAC+TGG + chr4_3:54786154-54786173 Msa0648280:intron 35.0%
AAAGCCAACATGGTAAATCA+TGG + chr4_3:54786295-54786314 Msa0648280:intron 35.0%
CTAACCATGATTTACCATGT+TGG - chr4_3:54786302-54786321 None:intergenic 35.0%
!! TGGTTAGTTTCATAAGATCG+TGG + chr4_3:54786315-54786334 Msa0648280:intron 35.0%
!! GGTTAGTTTCATAAGATCGT+GGG + chr4_3:54786316-54786335 Msa0648280:intron 35.0%
! TAAGCTAGCTTATAGCTTGT+TGG - chr4_3:54786523-54786542 None:intergenic 35.0%
AGAAGAGTCAATCGTTGAAT+CGG + chr4_3:54786816-54786835 Msa0648280:intron 35.0%
ACTTCTTTATATGCTAGGGT+TGG + chr4_3:54787011-54787030 Msa0648280:intron 35.0%
!!! GAATCCCTTTAAGGTTTTCA+AGG - chr4_3:54787139-54787158 None:intergenic 35.0%
ATCCAGGAATTACGATTAGT+GGG + chr4_3:54787280-54787299 Msa0648280:three_prime_UTR 35.0%
ACAGCTAATCTCCTAAATTC+TGG - chr4_3:54787519-54787538 None:intergenic 35.0%
TACACTGGATAAAGTGTAGT+GGG - chr4_3:54787588-54787607 None:intergenic 35.0%
TTACACTGGATAAAGTGTAG+TGG - chr4_3:54787589-54787608 None:intergenic 35.0%
GAGTTGGAATAGCTAAAAAG+CGG - chr4_3:54787663-54787682 None:intergenic 35.0%
TGAAGAACATAACCTTGAGT+TGG - chr4_3:54787679-54787698 None:intergenic 35.0%
GAGATAAGGAATTTGGAAGA+TGG - chr4_3:54787729-54787748 None:intergenic 35.0%
CTAGAACCGATAAAGAGATA+AGG - chr4_3:54787743-54787762 None:intergenic 35.0%
TCATCAAGGTTTGAGGATTA+TGG - chr4_3:54787790-54787809 None:intergenic 35.0%
TCCTACACACCACAACATAA+TGG + chr4_3:54782794-54782813 Msa0648280:exon 40.0%
TCCATTATGTTGTGGTGTGT+AGG - chr4_3:54782798-54782817 None:intergenic 40.0%
GACATCTTTGAGCAAAGGTA+TGG - chr4_3:54782943-54782962 None:intergenic 40.0%
TATTATGGTGCAAGCTGCAT+TGG - chr4_3:54783384-54783403 None:intergenic 40.0%
CTTTGTGAAGGAAAAGACAG+AGG - chr4_3:54783494-54783513 None:intergenic 40.0%
GACAAAACACCTATAAGGTC+AGG + chr4_3:54783641-54783660 Msa0648280:CDS 40.0%
CCTTCATATCCTGACCTTAT+AGG - chr4_3:54783653-54783672 None:intergenic 40.0%
CCTATAAGGTCAGGATATGA+AGG + chr4_3:54783650-54783669 Msa0648280:CDS 40.0%
TACTGACACTCAACCATGTA+AGG + chr4_3:54783987-54784006 Msa0648280:intron 40.0%
AGGACCATCTTATCTTCATG+TGG + chr4_3:54784007-54784026 Msa0648280:intron 40.0%
TTCATGTGGTTGACTGTGTA+TGG + chr4_3:54784021-54784040 Msa0648280:intron 40.0%
TGGTTGACTGTGTATGGTAA+CGG + chr4_3:54784027-54784046 Msa0648280:intron 40.0%
CTATGGGATTAGGCTATACA+TGG + chr4_3:54784274-54784293 Msa0648280:CDS 40.0%
AACCAGAGTCTAAAGGTCTA+TGG + chr4_3:54784396-54784415 Msa0648280:CDS 40.0%
ACCAGAGTCTAAAGGTCTAT+GGG + chr4_3:54784397-54784416 Msa0648280:CDS 40.0%
! GATTGGCTCATCTTAGGTAT+AGG - chr4_3:54784449-54784468 None:intergenic 40.0%
GAGGGTTGGAGATATTTGAT+TGG - chr4_3:54784466-54784485 None:intergenic 40.0%
! CATAGCTTTGCTCTTGGATT+TGG + chr4_3:54784550-54784569 Msa0648280:CDS 40.0%
AATGAAGTTAAGAGGGTCTG+AGG + chr4_3:54784574-54784593 Msa0648280:CDS 40.0%
TATTGGGTTTGTGTTTCAGG+TGG + chr4_3:54784764-54784783 Msa0648280:intron 40.0%
GCACTATTTGCCACAATTCA+AGG + chr4_3:54785014-54785033 Msa0648280:intron 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr4_3:54785017-54785036 Msa0648280:intron 40.0%
ATAAGTGTGTGATGTGAGGT+TGG - chr4_3:54785572-54785591 None:intergenic 40.0%
! CATGCTTCACTTCTTGTTTG+TGG + chr4_3:54787061-54787080 Msa0648280:intron 40.0%
GATCCAGGAATTACGATTAG+TGG + chr4_3:54787279-54787298 Msa0648280:three_prime_UTR 40.0%
TCCAGGAATTACGATTAGTG+GGG + chr4_3:54787281-54787300 Msa0648280:three_prime_UTR 40.0%
GATCTATCGTAAGCCAAACA+TGG - chr4_3:54787547-54787566 None:intergenic 40.0%
AAAGCGGTGGCACAATTATT+AGG - chr4_3:54787647-54787666 None:intergenic 40.0%
TTGGAATAGCTAAAAAGCGG+TGG - chr4_3:54787660-54787679 None:intergenic 40.0%
!! TGAAAAGAGAGTGCTCATCA+AGG - chr4_3:54787804-54787823 None:intergenic 40.0%
TATTGTCCATGAGGACTCAC+TGG - chr4_3:54782846-54782865 None:intergenic 45.0%
! CCATAATAGAGGAGAAGCGT+GGG - chr4_3:54782980-54782999 None:intergenic 45.0%
ACCATAATAGAGGAGAAGCG+TGG - chr4_3:54782981-54783000 None:intergenic 45.0%
GCACAGGTAAAAGACGAAGA+TGG + chr4_3:54783167-54783186 Msa0648280:intron 45.0%
! CTGAATCATGCACTTGGTGA+TGG + chr4_3:54783410-54783429 Msa0648280:CDS 45.0%
GGAAAAGACAGAGGTAGAGA+AGG - chr4_3:54783485-54783504 None:intergenic 45.0%
AGCTTGGAGTGGTAAGAGTT+TGG + chr4_3:54783744-54783763 Msa0648280:intron 45.0%
!! GTGTATGGTAACGGACTTGT+CGG + chr4_3:54784036-54784055 Msa0648280:intron 45.0%
AACATCAAATTCCACAGCGG+TGG + chr4_3:54784319-54784338 Msa0648280:CDS 45.0%
TGGAGGTTACCAATCAGTGA+AGG + chr4_3:54784364-54784383 Msa0648280:CDS 45.0%
CCAGAGTCTAAAGGTCTATG+GGG + chr4_3:54784398-54784417 Msa0648280:CDS 45.0%
CAGAGTCTAAAGGTCTATGG+GGG + chr4_3:54784399-54784418 Msa0648280:CDS 45.0%
CCAAACAAACTCAAGAGGGT+TGG - chr4_3:54784480-54784499 None:intergenic 45.0%
! CCAACCCTCTTGAGTTTGTT+TGG + chr4_3:54784477-54784496 Msa0648280:CDS 45.0%
GCCAGTAGAGAAGATGACTT+TGG + chr4_3:54784848-54784867 Msa0648280:CDS 45.0%
GCCAAAGTCATCTTCTCTAC+TGG - chr4_3:54784852-54784871 None:intergenic 45.0%
TACCTCAGGTCCATTTGTCA+TGG - chr4_3:54784904-54784923 None:intergenic 45.0%
ACCAAAGGGAGCTTTCATGA+CGG - chr4_3:54786565-54786584 None:intergenic 45.0%
AGTCATATCCGAAGCAGCTA+TGG + chr4_3:54787203-54787222 Msa0648280:CDS 45.0%
TCCCCACTAATCGTAATTCC+TGG - chr4_3:54787285-54787304 None:intergenic 45.0%
! AGAGTGCTCATCAAGGTTTG+AGG - chr4_3:54787797-54787816 None:intergenic 45.0%
!! AAATAATTAATGATAATAAA+AGG - chr4_3:54783125-54783144 None:intergenic 5.0%
!! AAAAAAAATAAATATATCAT+TGG + chr4_3:54784180-54784199 Msa0648280:intron 5.0%
!!! TTTTAATTAAATTTTTATGT+CGG + chr4_3:54785625-54785644 Msa0648280:intron 5.0%
!! AATAAAATAAAATTAAGAAA+AGG + chr4_3:54786360-54786379 Msa0648280:intron 5.0%
!!! GTATTTTAATATTTAAATAA+CGG + chr4_3:54786670-54786689 Msa0648280:intron 5.0%
!! AAAATTACTAAAAATTATAA+AGG - chr4_3:54786737-54786756 None:intergenic 5.0%
!! AGGAGAAGCGTGGGTTGATA+GGG - chr4_3:54782971-54782990 None:intergenic 50.0%
CCCACGCTTCTCCTCTATTA+TGG + chr4_3:54782977-54782996 Msa0648280:CDS 50.0%
!! GTGCAAGCTGCATTGGTTGT+TGG - chr4_3:54783377-54783396 None:intergenic 50.0%
CCCCATAGACCTTTAGACTC+TGG - chr4_3:54784401-54784420 None:intergenic 50.0%
CACCATGACAAATGGACCTG+AGG + chr4_3:54784899-54784918 Msa0648280:CDS 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr4_3:54785022-54785041 Msa0648280:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr4_3:54785027-54785046 None:intergenic 50.0%
GCTTTCATGACGGCTGTGTT+TGG - chr4_3:54786555-54786574 None:intergenic 50.0%
GGAGATCTCCATAGCTGCTT+CGG - chr4_3:54787214-54787233 None:intergenic 50.0%
CAAGAGCCAGTGAGTCCTCA+TGG + chr4_3:54782837-54782856 Msa0648280:CDS 55.0%
!! GAGGAGAAGCGTGGGTTGAT+AGG - chr4_3:54782972-54782991 None:intergenic 55.0%
GTTGAGCATTACCACCGCTG+TGG - chr4_3:54784333-54784352 None:intergenic 55.0%
GCCGTCATGAAAGCTCCCTT+TGG + chr4_3:54786561-54786580 Msa0648280:intron 55.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 54782772 54787827 54782772 ID=Msa0648280;Name=Msa0648280
chr4_3 mRNA 54782772 54787827 54782772 ID=Msa0648280-mRNA-1;Parent=Msa0648280;Name=Msa0648280-mRNA-1;_AED=0.07;_eAED=0.07;_QI=41|1|1|1|1|1|5|573|474
chr4_3 exon 54782772 54782998 54782772 ID=Msa0648280-mRNA-1:exon:13865;Parent=Msa0648280-mRNA-1
chr4_3 exon 54783173 54783754 54783173 ID=Msa0648280-mRNA-1:exon:13866;Parent=Msa0648280-mRNA-1
chr4_3 exon 54784242 54784595 54784242 ID=Msa0648280-mRNA-1:exon:13867;Parent=Msa0648280-mRNA-1
chr4_3 exon 54784783 54784920 54784783 ID=Msa0648280-mRNA-1:exon:13868;Parent=Msa0648280-mRNA-1
chr4_3 exon 54787090 54787827 54787090 ID=Msa0648280-mRNA-1:exon:13869;Parent=Msa0648280-mRNA-1
chr4_3 five_prime_UTR 54782772 54782812 54782772 ID=Msa0648280-mRNA-1:five_prime_utr;Parent=Msa0648280-mRNA-1
chr4_3 CDS 54782813 54782998 54782813 ID=Msa0648280-mRNA-1:cds;Parent=Msa0648280-mRNA-1
chr4_3 CDS 54783173 54783754 54783173 ID=Msa0648280-mRNA-1:cds;Parent=Msa0648280-mRNA-1
chr4_3 CDS 54784242 54784595 54784242 ID=Msa0648280-mRNA-1:cds;Parent=Msa0648280-mRNA-1
chr4_3 CDS 54784783 54784920 54784783 ID=Msa0648280-mRNA-1:cds;Parent=Msa0648280-mRNA-1
chr4_3 CDS 54787090 54787254 54787090 ID=Msa0648280-mRNA-1:cds;Parent=Msa0648280-mRNA-1
chr4_3 three_prime_UTR 54787255 54787827 54787255 ID=Msa0648280-mRNA-1:three_prime_utr;Parent=Msa0648280-mRNA-1
Gene Sequence

>Msa0648280

ATGGACAAATTCTTTGGAGAAGTTCAAGAGCCAGTGAGTCCTCATGGACAATATTTCAACAGCTCTGTGATGTGTTCATATGTTTTTGGCTTTCTGGAATTAGCTATTCCATTTGATAATTCACTAGCCATACCTTTGCTCAAAGATGTCTTCATCCCTATCAACCCACGCTTCTCCTCTATTATGGTAAAAGACGAAGATGGTAAGATGAAATGGCAAAAGGTTGAAGTGAAGCCTGAAGAACACTTAAAGATTCCCATATTTCCTGAAACCATAAATTCATCATGTGAATTATATGACAAATATGTTAGTAACTATGTAACAAGTATTCTAAATGGAAGAACACCACAAAATAAACCACTTTGGGAAATTCATATTATCAATTATCCAACAACCAATGCAGCTTGCACCATAATATTCAAACTGAATCATGCACTTGGTGATGGTTACTCTCTCATGAGTGCTCTTCTTTCTTGTCTTCAAAGAGCTGATGATCCTTCTCTACCTCTGTCTTTTCCTTCACAAAGACCACAATTAGATTCAAAATATGCAAAGATAAACTTATTTGACAAGCTATGTTTTGTTATCTCATCCTTTTTTAGCTCCATATCAGATTTTGGATCAAGCATATTGAAGTCTAGAATGATTAAAGATGACAAAACACCTATAAGGTCAGGATATGAAGGTGCTGAATCTCAGCCTTTTATCTTGTCAAACATAACATTATCTCTTGATCAAATCAAAGGAGTTAAATCAAAGCTTGGAGTGACTATAAACGACGTGATTACGGGAATGATCTTCTATGGGATTAGGCTATACATGGAAGAGAAGAATGAGAAGACAAAAACATCAAATTCCACAGCGGTGGTAATGCTCAACACAAGAAATATTGGAGGTTACCAATCAGTGAAGGAAATGCAAAAACCAGAGTCTAAAGGTCTATGGGGGAATAAAATTTCTTTCTTACAAATACCTATACCTAAGATGAGCCAATCAAATATCTCCAACCCTCTTGAGTTTGTTTGGAATACTCGTGAACTAATCAAGAGGAAGAGACGTTCTTTCAGTGTTTATCTCATAGCTTTGCTCTTGGATTTGGAAATGAAGTTAAGAGGGTCTGAGGTGGTAGCTAAAATAATCTATAACACAACTGGGAACTCAAGTGTTCTTATGTCAAACATTGTAGGGCCAGTAGAGAAGATGACTTTGGCAAATCATCCAGTAAATGGATTGTGTTTCACCATGACAAATGGACCTGAGAATGTAAACATTACAATTATTAGCTACATGAATATATTAAGAATCACCTTGAAAACCTTAAAGGGATTCATAGATGAACAAAAATTGAAGTTCTGCATAGAGAAAGCAGTCGAAGTCATATCCGAAGCAGCTATGGAGATCTCCGAGATATCCACAAAAAATTAA

Protein sequence

>Msa0648280

MDKFFGEVQEPVSPHGQYFNSSVMCSYVFGFLELAIPFDNSLAIPLLKDVFIPINPRFSSIMVKDEDGKMKWQKVEVKPEEHLKIPIFPETINSSCELYDKYVSNYVTSILNGRTPQNKPLWEIHIINYPTTNAACTIIFKLNHALGDGYSLMSALLSCLQRADDPSLPLSFPSQRPQLDSKYAKINLFDKLCFVISSFFSSISDFGSSILKSRMIKDDKTPIRSGYEGAESQPFILSNITLSLDQIKGVKSKLGVTINDVITGMIFYGIRLYMEEKNEKTKTSNSTAVVMLNTRNIGGYQSVKEMQKPESKGLWGNKISFLQIPIPKMSQSNISNPLEFVWNTRELIKRKRRSFSVYLIALLLDLEMKLRGSEVVAKIIYNTTGNSSVLMSNIVGPVEKMTLANHPVNGLCFTMTNGPENVNITIISYMNILRITLKTLKGFIDEQKLKFCIEKAVEVISEAAMEISEISTKN*