AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1373920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1373920 MtrunA17_Chr7g0260671 93.241 503 34 0 1 503 1 503 0.0 969
Msa1373920 MtrunA17_Chr7g0260681 97.857 420 9 0 1 420 1 420 0.0 873
Msa1373920 MtrunA17_Chr4g0039301 53.613 429 183 10 73 495 99 517 5.74e-168 485
Msa1373920 MtrunA17_Chr2g0283561 39.951 408 217 5 74 474 39 425 2.57e-99 306
Msa1373920 MtrunA17_Chr4g0046001 39.430 421 218 8 74 488 13 402 1.00e-97 301
Msa1373920 MtrunA17_Chr4g0046011 38.480 421 222 8 74 488 4 393 2.89e-96 297
Msa1373920 MtrunA17_Chr7g0214711 41.761 352 173 10 74 418 105 431 2.80e-85 272
Msa1373920 MtrunA17_Chr4g0041311 34.222 450 237 7 52 475 14 430 1.76e-83 265
Msa1373920 MtrunA17_Chr5g0399641 38.684 380 198 12 74 437 135 495 1.01e-80 261
Msa1373920 MtrunA17_Chr7g0250611 38.814 371 191 12 74 434 75 419 2.54e-78 251
Msa1373920 MtrunA17_Chr7g0250561 34.120 466 244 14 10 438 11 450 2.59e-76 247
Msa1373920 MtrunA17_Chr4g0055691 38.753 369 196 9 78 437 133 480 9.81e-72 237
Msa1373920 MtrunA17_Chr7g0260691 97.727 44 1 0 460 503 13 56 3.01e-23 92.8
Msa1373920 MtrunA17_Chr2g0286301 32.530 166 84 8 198 359 98 239 2.41e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1373920 AT2G30550.2 57.639 432 174 6 71 497 98 525 0.0 535
Msa1373920 AT1G06800.1 51.717 495 216 10 7 495 31 508 0.0 522
Msa1373920 AT2G30550.1 60.112 356 133 6 71 421 98 449 1.89e-160 464
Msa1373920 AT1G51440.1 48.833 514 225 12 20 502 15 521 2.43e-159 463
Msa1373920 AT1G06800.2 58.924 353 135 7 74 420 85 433 2.85e-155 449
Msa1373920 AT1G30370.1 42.222 405 217 7 74 473 114 506 1.86e-108 333
Msa1373920 AT1G05800.1 42.350 366 185 9 59 419 66 410 3.28e-93 291
Msa1373920 AT1G06250.1 38.049 410 223 6 74 474 5 392 8.22e-89 279
Msa1373920 AT2G31690.1 40.568 387 206 10 66 447 80 447 4.40e-88 279
Msa1373920 AT4G18550.1 36.029 408 232 4 76 475 21 407 8.16e-88 276
Msa1373920 AT4G18550.2 36.029 408 232 4 76 475 38 424 1.06e-87 276
Msa1373920 AT2G42690.1 34.834 422 226 6 77 475 7 402 2.04e-82 262
Msa1373920 AT4G16820.1 40.404 396 195 13 55 436 110 478 8.40e-79 256
Msa1373920 AT2G44810.2 35.204 392 215 10 62 434 72 443 1.62e-76 248
Msa1373920 AT2G44810.1 36.486 370 198 9 82 434 4 353 6.90e-76 243
Msa1373920 AT4G18550.3 37.818 275 165 2 76 344 38 312 9.13e-64 210
Msa1373920 AT1G06250.2 36.789 299 163 3 181 474 1 278 1.50e-60 201
Msa1373920 AT5G18640.5 31.148 183 90 10 182 359 89 240 3.11e-11 64.7
Msa1373920 AT5G18640.1 31.148 183 90 10 182 359 89 240 7.92e-11 64.3
Msa1373920 AT5G18640.3 31.148 183 90 10 182 359 89 240 7.92e-11 64.3
Msa1373920 AT5G18640.4 31.148 183 90 10 182 359 101 252 8.73e-11 63.9
Msa1373920 AT5G18640.2 31.148 183 90 10 182 359 101 252 8.73e-11 63.9

Find 130 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGATTGGAGAAACATTT+AGG 0.169595 tig0019464:+97012 Msa1373920:CDS
CAAGGAATGTCTTGGTAAAT+AGG 0.211928 tig0019464:-96682 None:intergenic
ATTAGTTCAGATCGCATTAT+TGG 0.219681 tig0019464:-96060 None:intergenic
CGGTTAAATGTTAGGGAAAA+TGG 0.236210 tig0019464:+96925 Msa1373920:CDS
TTCAAATCTTGCCTCCAATT+TGG 0.241101 tig0019464:-99456 None:intergenic
CGAGATTTCTTAAAGAAATC+TGG 0.241938 tig0019464:-96255 None:intergenic
GGACATTGCTTTGGTGAATA+AGG 0.258869 tig0019464:+99398 Msa1373920:CDS
AAGAAAGTGGATTCGGATTT+GGG 0.266472 tig0019464:-95811 None:intergenic
GAAGAAAGTGGATTCGGATT+TGG 0.267139 tig0019464:-95812 None:intergenic
GTTGGGAACGTGAAATTTAA+AGG 0.276041 tig0019464:+96991 Msa1373920:CDS
ACGTTAACGGGACATAGTTT+AGG 0.282591 tig0019464:+96859 Msa1373920:CDS
GATATGAAGCGACAACTAAA+AGG 0.286172 tig0019464:+99376 Msa1373920:CDS
CGTTAACGGGACATAGTTTA+GGG 0.299251 tig0019464:+96860 Msa1373920:CDS
CAGAAACACGGTTAAATGTT+AGG 0.300124 tig0019464:+96917 Msa1373920:CDS
ATTGGAGCGAACACGCAAAT+TGG 0.300439 tig0019464:+96292 Msa1373920:CDS
ATGAAGAGATGAGTCCTATC+TGG 0.311376 tig0019464:-99575 None:intergenic
CTCGATGGCCAGATAAATAT+TGG 0.316448 tig0019464:+96274 Msa1373920:CDS
GGAGATTGGAGAAACATTTA+GGG 0.327887 tig0019464:+97013 Msa1373920:CDS
GGGTTATTGGTTGTGTTGTT+TGG 0.337415 tig0019464:-95864 None:intergenic
GTAATACTAACTTCTTCATT+AGG 0.342805 tig0019464:-96838 None:intergenic
CGTGAAATTTAAAGGGAGAT+TGG 0.344597 tig0019464:+96999 Msa1373920:CDS
TCCGAATCCACTTTCTTCTT+CGG 0.346871 tig0019464:+95817 Msa1373920:CDS
GCAAGATTTGAATAGGAATA+TGG 0.354087 tig0019464:+99467 Msa1373920:CDS
AGCACTCTGTGCCACCAAAT+TGG 0.358258 tig0019464:+99442 Msa1373920:CDS
GAAGTTAGTATTACGTTAAC+GGG 0.360874 tig0019464:+96847 Msa1373920:CDS
TTGGAGTTGTGTGATGGTAT+TGG 0.364729 tig0019464:-95929 None:intergenic
AAGTGTTTACAAATGTAATT+CGG 0.371863 tig0019464:+99762 Msa1373920:three_prime_UTR
TGTTCGCTCCAATATTTATC+TGG 0.373590 tig0019464:-96282 None:intergenic
ATTGGAGGCAAGATTTGAAT+AGG 0.374370 tig0019464:+99460 Msa1373920:CDS
AAAATCAAATGCATCATAAC+AGG 0.381110 tig0019464:-96106 None:intergenic
GATCGCATTATTGGATCCAT+TGG 0.395016 tig0019464:-96051 None:intergenic
GCACATGCAGCATCAGCATT+AGG 0.397000 tig0019464:-97216 None:intergenic
CGATCTGAACTAATCCGTTA+TGG 0.401938 tig0019464:+96069 Msa1373920:CDS
AAATCCACGGTGAAGATGAT+TGG 0.402324 tig0019464:+96013 Msa1373920:CDS
AAGCTAGTTGATTGAATGAA+TGG 0.402880 tig0019464:+99613 Msa1373920:three_prime_UTR
TTGTGTGATGGTATTGGATT+GGG 0.411595 tig0019464:-95923 None:intergenic
ATAAGAAACCCTGGTGACTT+TGG 0.419814 tig0019464:-97075 None:intergenic
AACTAAAAGGGACATTGCTT+TGG 0.433662 tig0019464:+99389 Msa1373920:CDS
GGTTCATAATAAGCATGATA+TGG 0.439973 tig0019464:+97050 Msa1373920:CDS
TGCTGCATGTGCTCATAACT+TGG 0.440073 tig0019464:+97227 Msa1373920:CDS
GTTGTGTGATGGTATTGGAT+TGG 0.445893 tig0019464:-95924 None:intergenic
AGAAACACGGTTAAATGTTA+GGG 0.446331 tig0019464:+96918 Msa1373920:CDS
GAATTTGAGGTGGTTGGAGT+TGG 0.451070 tig0019464:-95842 None:intergenic
TTGGATCCATTGGATTCAAA+AGG 0.454906 tig0019464:-96041 None:intergenic
AGAAGTTAGTATTACGTTAA+CGG 0.458390 tig0019464:+96846 Msa1373920:CDS
TTGGGAACGTGAAATTTAAA+GGG 0.459427 tig0019464:+96992 Msa1373920:CDS
TCCGAAGAAGAAAGTGGATT+CGG 0.461681 tig0019464:-95818 None:intergenic
AGTAAGAATGAAGATGGAGT+TGG 0.469367 tig0019464:-95747 None:intergenic
CAAATGCATCATAACAGGCT+TGG 0.470701 tig0019464:-96101 None:intergenic
GAGCCTTATCTCTCCCAGAT+AGG 0.471370 tig0019464:+99561 Msa1373920:CDS
TCTACTCGAACATCGTTGTC+TGG 0.471524 tig0019464:-96706 None:intergenic
GTTGTGTTGTTTGGAATTTG+AGG 0.472244 tig0019464:-95855 None:intergenic
TGTTGTTTCATCGTTTGAAA+CGG 0.473023 tig0019464:-96328 None:intergenic
CATATCCACGGTTGCTCCCA+TGG 0.475119 tig0019464:-99359 None:intergenic
CGAAGATGGACGTTGGGTGC+TGG 0.476306 tig0019464:+99497 Msa1373920:CDS
TACTGAACTACCAATCGAAA+AGG 0.478400 tig0019464:+95981 Msa1373920:CDS
GATGGTATTGGATTGGGTTG+TGG 0.480811 tig0019464:-95917 None:intergenic
AAATGCATCATAACAGGCTT+GGG 0.481652 tig0019464:-96100 None:intergenic
TGTTTGGAATTTGAGGTGGT+TGG 0.484186 tig0019464:-95848 None:intergenic
AATCCACGGTGAAGATGATT+GGG 0.492427 tig0019464:+96014 Msa1373920:CDS
CAGCACCCAACGTCCATCTT+CGG 0.497295 tig0019464:-99496 None:intergenic
AAATCTTGCCTCCAATTTGG+TGG 0.500957 tig0019464:-99453 None:intergenic
CGTTAGATCTTCCACACATA+GGG 0.505096 tig0019464:+96187 Msa1373920:CDS
GAGATTTCTTAAAGAAATCT+GGG 0.505416 tig0019464:-96254 None:intergenic
GATGAAACAACAAAACAGAT+AGG 0.505936 tig0019464:+96339 Msa1373920:CDS
TAGTATAGCATAATCAGCTT+CGG 0.509491 tig0019464:-99710 None:intergenic
TACTGTGACTCATGTTGAAT+GGG 0.514995 tig0019464:+96633 Msa1373920:CDS
GTAGAGACGTCGTCGTTGCT+TGG 0.515529 tig0019464:+96605 Msa1373920:CDS
GAGCGAACACGCAAATTGGA+TGG 0.516239 tig0019464:+96296 Msa1373920:CDS
GATATGGTGCCAAAGTCACC+AGG 0.523665 tig0019464:+97066 Msa1373920:CDS
TGTTGGAGTTGAGTTAGAGT+TGG 0.525724 tig0019464:+97167 Msa1373920:CDS
TGTTAGAGTAAGAATGAAGA+TGG 0.528850 tig0019464:-95753 None:intergenic
AATATGGTGAAGACCGAAGA+TGG 0.533831 tig0019464:+99483 Msa1373920:CDS
AACGATGTTCGAGTAGAAGC+AGG 0.537151 tig0019464:+96712 Msa1373920:CDS
TGGTAACATACTGTAATTGT+TGG 0.540134 tig0019464:+99671 Msa1373920:three_prime_UTR
GATGAGTATCTGCAAGTTGT+GGG 0.543513 tig0019464:-99527 None:intergenic
TAGTTGTCGCTTCATATCCA+CGG 0.544561 tig0019464:-99371 None:intergenic
CTGAGGATATTGATATTCCA+TGG 0.547347 tig0019464:+97133 Msa1373920:CDS
AATTTCACGTTCCCAACCCT+AGG 0.553515 tig0019464:-96985 None:intergenic
AGTGGATTCGGATTTGGGAA+AGG 0.556138 tig0019464:-95806 None:intergenic
TTGTGATTGGAGTTGTGTGA+TGG 0.556763 tig0019464:-95935 None:intergenic
TGCATGTGCTCATAACTTGG+AGG 0.557550 tig0019464:+97230 Msa1373920:CDS
TCGTTAGATCTTCCACACAT+AGG 0.560088 tig0019464:+96186 Msa1373920:CDS
TGATGATGAGCAGGTACCAT+GGG 0.560215 tig0019464:+99343 Msa1373920:intron
AGTCCTATCTGGGAGAGATA+AGG 0.560550 tig0019464:-99564 None:intergenic
ACTCTGTGCCACCAAATTGG+AGG 0.560687 tig0019464:+99445 Msa1373920:CDS
ATATGAAGCGACAACTAAAA+GGG 0.562797 tig0019464:+99377 Msa1373920:CDS
GATCCATATTCAAAATATTG+TGG 0.563766 tig0019464:+96129 Msa1373920:CDS
TCTTCATTCTTACTCTAACA+TGG 0.564637 tig0019464:+95756 Msa1373920:exon
ACCCATCGAGTATGTGCAAG+TGG 0.565551 tig0019464:-97254 None:intergenic
GCCCACTTGCACATACTCGA+TGG 0.566632 tig0019464:+97252 Msa1373920:CDS
CGAACATCGTTGTCTGGACA+AGG 0.568633 tig0019464:-96700 None:intergenic
CCATGGTGTTACACTCATGT+TGG 0.572004 tig0019464:+97150 Msa1373920:CDS
GAAGACCGAAGATGGACGTT+GGG 0.573919 tig0019464:+99491 Msa1373920:CDS
GTACTGTGACTCATGTTGAA+TGG 0.574716 tig0019464:+96632 Msa1373920:CDS
GTTGGATCCGAAGAAGAAAG+TGG 0.577003 tig0019464:-95824 None:intergenic
TTCTCATTAATAAGAAACCC+TGG 0.577571 tig0019464:-97084 None:intergenic
TGAAGAGATGAGTCCTATCT+GGG 0.580441 tig0019464:-99574 None:intergenic
GTGTTGTTTGGAATTTGAGG+TGG 0.580769 tig0019464:-95852 None:intergenic
AGCGAACACGCAAATTGGAT+GGG 0.585489 tig0019464:+96297 Msa1373920:CDS
CACGGTGAAGATGATTGGGT+TGG 0.586953 tig0019464:+96018 Msa1373920:CDS
TGATGAGTATCTGCAAGTTG+TGG 0.587655 tig0019464:-99528 None:intergenic
ACCGATAGACAAACAAAAGA+CGG 0.593031 tig0019464:+96751 Msa1373920:CDS
TGATAATGATATATATAGAG+TGG 0.593271 tig0019464:+99651 Msa1373920:three_prime_UTR
AAGGCATGGCGCAAAATCCA+CGG 0.594575 tig0019464:+96000 Msa1373920:CDS
CTTGGGACATCTCTCCATAA+CGG 0.598290 tig0019464:-96083 None:intergenic
GACGTCGTCGTTGCTTGGCG+AGG 0.598300 tig0019464:+96610 Msa1373920:CDS
GTGGTTATTAAAGTTTGCTG+AGG 0.600416 tig0019464:+97116 Msa1373920:CDS
AACTACCAATCGAAAAGGCA+TGG 0.602251 tig0019464:+95986 Msa1373920:CDS
ATCATTATCAGTTTATCACA+TGG 0.602995 tig0019464:-99638 None:intergenic
ACATAGTTTAGGGAGTGCTA+TGG 0.614629 tig0019464:+96870 Msa1373920:CDS
TGTGTGGAAGATCTAACGAT+GGG 0.619407 tig0019464:-96182 None:intergenic
CCCACTTGCACATACTCGAT+GGG 0.620876 tig0019464:+97253 Msa1373920:CDS
TTGATGATGAGCAGGTACCA+TGG 0.623853 tig0019464:+99342 Msa1373920:intron
GTCACGTCATACCCTATGTG+TGG 0.628012 tig0019464:-96198 None:intergenic
TAACATTTGCTGTGGCGTAG+AGG 0.633479 tig0019464:-96227 None:intergenic
TGGGACGTTAACATTTGCTG+TGG 0.637969 tig0019464:-96235 None:intergenic
TGTCTGGACAAGGAATGTCT+TGG 0.642553 tig0019464:-96690 None:intergenic
CGTTTGATATAGCAGAAACA+CGG 0.643367 tig0019464:+96905 Msa1373920:CDS
AGGTACCATGGGAGCAACCG+TGG 0.651704 tig0019464:+99354 Msa1373920:intron
GAGATTGGAGAAACATTTAG+GGG 0.658549 tig0019464:+97014 Msa1373920:CDS
ATTTCTTTAAGAAATCTCGA+TGG 0.659322 tig0019464:+96259 Msa1373920:CDS
CCCATCGAGTATGTGCAAGT+GGG 0.660658 tig0019464:-97253 None:intergenic
TTAATGAGAAATCGCCTGAG+TGG 0.664008 tig0019464:+97097 Msa1373920:CDS
GCAAACTTTAATAACCACTC+AGG 0.666053 tig0019464:-97111 None:intergenic
CCAACATGAGTGTAACACCA+TGG 0.679476 tig0019464:-97150 None:intergenic
ATGTGTGGAAGATCTAACGA+TGG 0.689828 tig0019464:-96183 None:intergenic
TGAAGACCGAAGATGGACGT+TGG 0.699979 tig0019464:+99490 Msa1373920:CDS
ATATGGTGCCAAAGTCACCA+GGG 0.760395 tig0019464:+97067 Msa1373920:CDS
CAACCCAATCATCTTCACCG+TGG 0.788871 tig0019464:-96017 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCAAATATAAGAAATAAT+TGG + tig0019464:96418-96437 Msa1373920:intron 10.0%
!! ATACAGATTAAATAAAATAT+AGG - tig0019464:98331-98350 None:intergenic 10.0%
!! GTATTAAAAAACTATAAAAT+AGG + tig0019464:99017-99036 Msa1373920:intron 10.0%
!! TATCAAATATAAGAAATAAT+TGG + tig0019464:96418-96437 Msa1373920:intron 10.0%
!! ATACAGATTAAATAAAATAT+AGG - tig0019464:98331-98350 None:intergenic 10.0%
!! GTATTAAAAAACTATAAAAT+AGG + tig0019464:99017-99036 Msa1373920:intron 10.0%
!! TTCTTATATTTGATATATAG+TGG - tig0019464:96413-96432 None:intergenic 15.0%
!! TATAAAGTATACAAAGAAAT+TGG - tig0019464:96503-96522 None:intergenic 15.0%
!! TTTCTTTGTATACTTTATAT+AGG + tig0019464:96504-96523 Msa1373920:intron 15.0%
!!! TTTAAGAAAATTTTGAAGAT+TGG - tig0019464:96662-96681 None:intergenic 15.0%
!! AAATAAAAAAATATTAAGGG+AGG + tig0019464:97532-97551 Msa1373920:intron 15.0%
!! AGTATATTACAGTAATTAAT+TGG - tig0019464:97578-97597 None:intergenic 15.0%
!! AAAATATACCTTATATTCAT+AGG - tig0019464:97998-98017 None:intergenic 15.0%
!!! ATAACAATTTTGACAATATA+GGG - tig0019464:98073-98092 None:intergenic 15.0%
!!! AATAACAATTTTGACAATAT+AGG - tig0019464:98074-98093 None:intergenic 15.0%
!!! TTTTTGTGATTTAATATCTA+AGG - tig0019464:98273-98292 None:intergenic 15.0%
!! ATTTCAGTTTATTAAATAAC+TGG - tig0019464:98406-98425 None:intergenic 15.0%
!! CTCATGAAAATTTATTAAAT+AGG - tig0019464:98959-98978 None:intergenic 15.0%
!!! CTATTTAATAAATTTTCATG+AGG + tig0019464:98957-98976 Msa1373920:intron 15.0%
!! ATTAGATACTTATTAGATAT+TGG + tig0019464:98995-99014 Msa1373920:intron 15.0%
!! TTCTAACAAACATATAAAAA+AGG - tig0019464:99796-99815 None:intergenic 15.0%
!! TTCTTATATTTGATATATAG+TGG - tig0019464:96413-96432 None:intergenic 15.0%
!! TATAAAGTATACAAAGAAAT+TGG - tig0019464:96503-96522 None:intergenic 15.0%
!! TTTCTTTGTATACTTTATAT+AGG + tig0019464:96504-96523 Msa1373920:intron 15.0%
!!! TTTAAGAAAATTTTGAAGAT+TGG - tig0019464:96662-96681 None:intergenic 15.0%
!! AAATAAAAAAATATTAAGGG+AGG + tig0019464:97532-97551 Msa1373920:intron 15.0%
!! AGTATATTACAGTAATTAAT+TGG - tig0019464:97578-97597 None:intergenic 15.0%
!! AAAATATACCTTATATTCAT+AGG - tig0019464:97998-98017 None:intergenic 15.0%
!!! ATAACAATTTTGACAATATA+GGG - tig0019464:98073-98092 None:intergenic 15.0%
!!! AATAACAATTTTGACAATAT+AGG - tig0019464:98074-98093 None:intergenic 15.0%
!!! TTTTTGTGATTTAATATCTA+AGG - tig0019464:98273-98292 None:intergenic 15.0%
!! ATTTCAGTTTATTAAATAAC+TGG - tig0019464:98406-98425 None:intergenic 15.0%
!! CTCATGAAAATTTATTAAAT+AGG - tig0019464:98959-98978 None:intergenic 15.0%
!!! CTATTTAATAAATTTTCATG+AGG + tig0019464:98957-98976 Msa1373920:intron 15.0%
!! ATTAGATACTTATTAGATAT+TGG + tig0019464:98995-99014 Msa1373920:intron 15.0%
!! TTCTAACAAACATATAAAAA+AGG - tig0019464:99796-99815 None:intergenic 15.0%
!!! TATATTTGATATATAGTGGA+GGG - tig0019464:96409-96428 None:intergenic 20.0%
!! TTATATTTGATATATAGTGG+AGG - tig0019464:96410-96429 None:intergenic 20.0%
!! AAAATGAAAAAACAGAAACA+TGG - tig0019464:96960-96979 None:intergenic 20.0%
!!! TATTTGAGTTTAAGTTTGTT+CGG + tig0019464:97610-97629 Msa1373920:intron 20.0%
!!! TTCAAAGTCAATTTTTGTTA+AGG - tig0019464:97641-97660 None:intergenic 20.0%
!! ATTCCAAATCAATTAGAAAT+TGG + tig0019464:97770-97789 Msa1373920:intron 20.0%
!! TTCCAAATCAATTAGAAATT+GGG + tig0019464:97771-97790 Msa1373920:intron 20.0%
!!! TTATTTCTCGGAAAATATTT+GGG - tig0019464:97938-97957 None:intergenic 20.0%
!!! ATTATTTCTCGGAAAATATT+TGG - tig0019464:97939-97958 None:intergenic 20.0%
!! TTTAACAACCTATGAATATA+AGG + tig0019464:97987-98006 Msa1373920:intron 20.0%
!! ATTATGTTATAGAAAGAACA+TGG + tig0019464:98489-98508 Msa1373920:intron 20.0%
!! TATGAAAAAGTGAAAAAAGA+GGG - tig0019464:98636-98655 None:intergenic 20.0%
!! TTATGAAAAAGTGAAAAAAG+AGG - tig0019464:98637-98656 None:intergenic 20.0%
!! ATATAATGACATAGAATTAC+CGG + tig0019464:98928-98947 Msa1373920:intron 20.0%
!! ATTTATTAAATAGGTCTTAC+CGG - tig0019464:98950-98969 None:intergenic 20.0%
!! ACTCATTTAAATGTTTAAGT+GGG - tig0019464:99061-99080 None:intergenic 20.0%
!!! TACTGTTAACTATTTTTGAA+TGG + tig0019464:99277-99296 Msa1373920:intron 20.0%
!! AATGGCAAAATTTGTATATA+TGG + tig0019464:99295-99314 Msa1373920:intron 20.0%
!! ATGGCAAAATTTGTATATAT+GGG + tig0019464:99296-99315 Msa1373920:intron 20.0%
!!! TGATAATGATATATATAGAG+TGG + tig0019464:99651-99670 Msa1373920:three_prime_UTR 20.0%
!! AAGTGTTTACAAATGTAATT+CGG + tig0019464:99762-99781 Msa1373920:three_prime_UTR 20.0%
!!! TATATTTGATATATAGTGGA+GGG - tig0019464:96409-96428 None:intergenic 20.0%
!! TTATATTTGATATATAGTGG+AGG - tig0019464:96410-96429 None:intergenic 20.0%
!! AAAATGAAAAAACAGAAACA+TGG - tig0019464:96960-96979 None:intergenic 20.0%
!!! TATTTGAGTTTAAGTTTGTT+CGG + tig0019464:97610-97629 Msa1373920:intron 20.0%
!!! TTCAAAGTCAATTTTTGTTA+AGG - tig0019464:97641-97660 None:intergenic 20.0%
!! ATTCCAAATCAATTAGAAAT+TGG + tig0019464:97770-97789 Msa1373920:intron 20.0%
!! TTCCAAATCAATTAGAAATT+GGG + tig0019464:97771-97790 Msa1373920:intron 20.0%
!!! TTATTTCTCGGAAAATATTT+GGG - tig0019464:97938-97957 None:intergenic 20.0%
!!! ATTATTTCTCGGAAAATATT+TGG - tig0019464:97939-97958 None:intergenic 20.0%
!! TTTAACAACCTATGAATATA+AGG + tig0019464:97987-98006 Msa1373920:intron 20.0%
!! ATTATGTTATAGAAAGAACA+TGG + tig0019464:98489-98508 Msa1373920:intron 20.0%
!! TATGAAAAAGTGAAAAAAGA+GGG - tig0019464:98636-98655 None:intergenic 20.0%
!! TTATGAAAAAGTGAAAAAAG+AGG - tig0019464:98637-98656 None:intergenic 20.0%
!! ATATAATGACATAGAATTAC+CGG + tig0019464:98928-98947 Msa1373920:intron 20.0%
!! ATTTATTAAATAGGTCTTAC+CGG - tig0019464:98950-98969 None:intergenic 20.0%
!! ACTCATTTAAATGTTTAAGT+GGG - tig0019464:99061-99080 None:intergenic 20.0%
!!! TACTGTTAACTATTTTTGAA+TGG + tig0019464:99277-99296 Msa1373920:intron 20.0%
!! AATGGCAAAATTTGTATATA+TGG + tig0019464:99295-99314 Msa1373920:intron 20.0%
!! ATGGCAAAATTTGTATATAT+GGG + tig0019464:99296-99315 Msa1373920:intron 20.0%
!!! TGATAATGATATATATAGAG+TGG + tig0019464:99651-99670 Msa1373920:three_prime_UTR 20.0%
!! AAGTGTTTACAAATGTAATT+CGG + tig0019464:99762-99781 Msa1373920:three_prime_UTR 20.0%
!!! TTTTTTGTTGTTAGGGTTAT+TGG - tig0019464:95880-95899 None:intergenic 25.0%
!!! AGTTTTGATGATTGTTTTGT+GGG - tig0019464:95961-95980 None:intergenic 25.0%
!!! AAGTTTTGATGATTGTTTTG+TGG - tig0019464:95962-95981 None:intergenic 25.0%
! AAAATCAAATGCATCATAAC+AGG - tig0019464:96109-96128 None:intergenic 25.0%
! GATCCATATTCAAAATATTG+TGG + tig0019464:96129-96148 Msa1373920:CDS 25.0%
!!! CTACCACAATATTTTGAATA+TGG - tig0019464:96135-96154 None:intergenic 25.0%
! GAGATTTCTTAAAGAAATCT+GGG - tig0019464:96257-96276 None:intergenic 25.0%
!! ATTTCTTTAAGAAATCTCGA+TGG + tig0019464:96259-96278 Msa1373920:CDS 25.0%
!!! GTTTCCAAAATATTTTTGAG+TGG + tig0019464:96375-96394 Msa1373920:intron 25.0%
!! ACATCCACTCAAAAATATTT+TGG - tig0019464:96382-96401 None:intergenic 25.0%
!! GCATATAGTAGTTCAAATTT+TGG - tig0019464:96468-96487 None:intergenic 25.0%
! GTAATACTAACTTCTTCATT+AGG - tig0019464:96841-96860 None:intergenic 25.0%
! AGAAGTTAGTATTACGTTAA+CGG + tig0019464:96846-96865 Msa1373920:CDS 25.0%
!!! GTTTCTGTTTTTTCATTTTC+TGG + tig0019464:96961-96980 Msa1373920:CDS 25.0%
!! TCAAAAATGGAGAAATTTTG+TGG - tig0019464:97194-97213 None:intergenic 25.0%
!! TAGTTTCTTTGATTGATGAT+AGG + tig0019464:97327-97346 Msa1373920:intron 25.0%
! TATAACATATGCATATCCAA+TGG + tig0019464:97418-97437 Msa1373920:intron 25.0%
!!! ACGTATATCTTTTTTAGTCA+TGG - tig0019464:97453-97472 None:intergenic 25.0%
! TAAAAAAATATTAAGGGAGG+AGG + tig0019464:97535-97554 Msa1373920:intron 25.0%
!!! TTTCTAATTGATTTGGAATG+AGG - tig0019464:97769-97788 None:intergenic 25.0%
! AACCCAATTTCTAATTGATT+TGG - tig0019464:97776-97795 None:intergenic 25.0%
!! GATGCTCATATATTATTTCT+CGG - tig0019464:97950-97969 None:intergenic 25.0%
! GGTATTGTCATAAAAGTAAA+AGG - tig0019464:98052-98071 None:intergenic 25.0%
! TGTGATTTAATATCTAAGGA+CGG - tig0019464:98269-98288 None:intergenic 25.0%
! AAATTTAATTACTGCGTACT+AGG + tig0019464:98422-98441 Msa1373920:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - tig0019464:98706-98725 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + tig0019464:98705-98724 Msa1373920:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + tig0019464:98718-98737 Msa1373920:intron 25.0%
! CACTCATTTAAATGTTTAAG+TGG - tig0019464:99062-99081 None:intergenic 25.0%
! AAACCATATTTCGTATGAAT+TGG - tig0019464:99185-99204 None:intergenic 25.0%
! TACGAAATATGGTTTATGAT+TGG + tig0019464:99190-99209 Msa1373920:intron 25.0%
! ATCATTATCAGTTTATCACA+TGG - tig0019464:99641-99660 None:intergenic 25.0%
!!! TTTTTTGTTGTTAGGGTTAT+TGG - tig0019464:95880-95899 None:intergenic 25.0%
!!! AGTTTTGATGATTGTTTTGT+GGG - tig0019464:95961-95980 None:intergenic 25.0%
!!! AAGTTTTGATGATTGTTTTG+TGG - tig0019464:95962-95981 None:intergenic 25.0%
! AAAATCAAATGCATCATAAC+AGG - tig0019464:96109-96128 None:intergenic 25.0%
! GATCCATATTCAAAATATTG+TGG + tig0019464:96129-96148 Msa1373920:CDS 25.0%
!!! CTACCACAATATTTTGAATA+TGG - tig0019464:96135-96154 None:intergenic 25.0%
! GAGATTTCTTAAAGAAATCT+GGG - tig0019464:96257-96276 None:intergenic 25.0%
!! ATTTCTTTAAGAAATCTCGA+TGG + tig0019464:96259-96278 Msa1373920:CDS 25.0%
!!! GTTTCCAAAATATTTTTGAG+TGG + tig0019464:96375-96394 Msa1373920:intron 25.0%
!! ACATCCACTCAAAAATATTT+TGG - tig0019464:96382-96401 None:intergenic 25.0%
!! GCATATAGTAGTTCAAATTT+TGG - tig0019464:96468-96487 None:intergenic 25.0%
! GTAATACTAACTTCTTCATT+AGG - tig0019464:96841-96860 None:intergenic 25.0%
! AGAAGTTAGTATTACGTTAA+CGG + tig0019464:96846-96865 Msa1373920:CDS 25.0%
!!! GTTTCTGTTTTTTCATTTTC+TGG + tig0019464:96961-96980 Msa1373920:CDS 25.0%
!! TCAAAAATGGAGAAATTTTG+TGG - tig0019464:97194-97213 None:intergenic 25.0%
!! TAGTTTCTTTGATTGATGAT+AGG + tig0019464:97327-97346 Msa1373920:intron 25.0%
! TATAACATATGCATATCCAA+TGG + tig0019464:97418-97437 Msa1373920:intron 25.0%
!!! ACGTATATCTTTTTTAGTCA+TGG - tig0019464:97453-97472 None:intergenic 25.0%
! TAAAAAAATATTAAGGGAGG+AGG + tig0019464:97535-97554 Msa1373920:intron 25.0%
!!! TTTCTAATTGATTTGGAATG+AGG - tig0019464:97769-97788 None:intergenic 25.0%
! AACCCAATTTCTAATTGATT+TGG - tig0019464:97776-97795 None:intergenic 25.0%
!! GATGCTCATATATTATTTCT+CGG - tig0019464:97950-97969 None:intergenic 25.0%
! GGTATTGTCATAAAAGTAAA+AGG - tig0019464:98052-98071 None:intergenic 25.0%
! TGTGATTTAATATCTAAGGA+CGG - tig0019464:98269-98288 None:intergenic 25.0%
! AAATTTAATTACTGCGTACT+AGG + tig0019464:98422-98441 Msa1373920:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - tig0019464:98706-98725 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + tig0019464:98705-98724 Msa1373920:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + tig0019464:98718-98737 Msa1373920:intron 25.0%
! CACTCATTTAAATGTTTAAG+TGG - tig0019464:99062-99081 None:intergenic 25.0%
! AAACCATATTTCGTATGAAT+TGG - tig0019464:99185-99204 None:intergenic 25.0%
! TACGAAATATGGTTTATGAT+TGG + tig0019464:99190-99209 Msa1373920:intron 25.0%
! ATCATTATCAGTTTATCACA+TGG - tig0019464:99641-99660 None:intergenic 25.0%
TGTTAGAGTAAGAATGAAGA+TGG - tig0019464:95756-95775 None:intergenic 30.0%
TCTTCATTCTTACTCTAACA+TGG + tig0019464:95756-95775 Msa1373920:exon 30.0%
!!! GGTGAGTTTTTTTGTTGTTA+GGG - tig0019464:95887-95906 None:intergenic 30.0%
!!! TGGTGAGTTTTTTTGTTGTT+AGG - tig0019464:95888-95907 None:intergenic 30.0%
ATTAGTTCAGATCGCATTAT+TGG - tig0019464:96063-96082 None:intergenic 30.0%
CGAGATTTCTTAAAGAAATC+TGG - tig0019464:96258-96277 None:intergenic 30.0%
!! TGTTGTTTCATCGTTTGAAA+CGG - tig0019464:96331-96350 None:intergenic 30.0%
GATGAAACAACAAAACAGAT+AGG + tig0019464:96339-96358 Msa1373920:CDS 30.0%
TCCAAACATAAACATCGTTA+GGG - tig0019464:96575-96594 None:intergenic 30.0%
TTCCAAACATAAACATCGTT+AGG - tig0019464:96576-96595 None:intergenic 30.0%
! ATGTTTATGTTTGGAACTAC+AGG + tig0019464:96580-96599 Msa1373920:intron 30.0%
!!! AAGTTTTAGGAGAAGTGAAA+AGG + tig0019464:96800-96819 Msa1373920:CDS 30.0%
GAAGTTAGTATTACGTTAAC+GGG + tig0019464:96847-96866 Msa1373920:CDS 30.0%
AGAAACACGGTTAAATGTTA+GGG + tig0019464:96918-96937 Msa1373920:CDS 30.0%
!!! TTTTTTCATTTTCTGGACCT+AGG + tig0019464:96968-96987 Msa1373920:CDS 30.0%
! TTTTTCATTTTCTGGACCTA+GGG + tig0019464:96969-96988 Msa1373920:CDS 30.0%
TTGGGAACGTGAAATTTAAA+GGG + tig0019464:96992-97011 Msa1373920:CDS 30.0%
! ATTTAGGGGTTAAGATTTTG+AGG + tig0019464:97028-97047 Msa1373920:CDS 30.0%
! TTTAGGGGTTAAGATTTTGA+GGG + tig0019464:97029-97048 Msa1373920:CDS 30.0%
GGTTCATAATAAGCATGATA+TGG + tig0019464:97050-97069 Msa1373920:CDS 30.0%
TTCTCATTAATAAGAAACCC+TGG - tig0019464:97087-97106 None:intergenic 30.0%
TCAGCATTAGGATTCAAAAA+TGG - tig0019464:97207-97226 None:intergenic 30.0%
TATCATTTCTCTTGTGTGAA+TGG + tig0019464:98110-98129 Msa1373920:intron 30.0%
! TTAAAGTGTCTAATTGGTCA+TGG - tig0019464:98187-98206 None:intergenic 30.0%
!! ATTCTCTAGAGTGGATAATT+CGG + tig0019464:98551-98570 Msa1373920:intron 30.0%
! AAAAAAGAGGGTCCTTTTAA+AGG - tig0019464:98624-98643 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - tig0019464:98680-98699 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - tig0019464:98803-98822 None:intergenic 30.0%
CATATTTCGTATGAATTGGT+TGG - tig0019464:99181-99200 None:intergenic 30.0%
CAACCAATTCATACGAAATA+TGG + tig0019464:99179-99198 Msa1373920:intron 30.0%
! TATGGTTTATGATTGGTTGA+CGG + tig0019464:99197-99216 Msa1373920:intron 30.0%
ATATGAAGCGACAACTAAAA+GGG + tig0019464:99377-99396 Msa1373920:CDS 30.0%
GCAAGATTTGAATAGGAATA+TGG + tig0019464:99467-99486 Msa1373920:CDS 30.0%
AAGCTAGTTGATTGAATGAA+TGG + tig0019464:99613-99632 Msa1373920:three_prime_UTR 30.0%
TGGTAACATACTGTAATTGT+TGG + tig0019464:99671-99690 Msa1373920:three_prime_UTR 30.0%
TAGTATAGCATAATCAGCTT+CGG - tig0019464:99713-99732 None:intergenic 30.0%
TGTTAGAGTAAGAATGAAGA+TGG - tig0019464:95756-95775 None:intergenic 30.0%
TCTTCATTCTTACTCTAACA+TGG + tig0019464:95756-95775 Msa1373920:exon 30.0%
!!! GGTGAGTTTTTTTGTTGTTA+GGG - tig0019464:95887-95906 None:intergenic 30.0%
!!! TGGTGAGTTTTTTTGTTGTT+AGG - tig0019464:95888-95907 None:intergenic 30.0%
ATTAGTTCAGATCGCATTAT+TGG - tig0019464:96063-96082 None:intergenic 30.0%
CGAGATTTCTTAAAGAAATC+TGG - tig0019464:96258-96277 None:intergenic 30.0%
!! TGTTGTTTCATCGTTTGAAA+CGG - tig0019464:96331-96350 None:intergenic 30.0%
GATGAAACAACAAAACAGAT+AGG + tig0019464:96339-96358 Msa1373920:CDS 30.0%
TCCAAACATAAACATCGTTA+GGG - tig0019464:96575-96594 None:intergenic 30.0%
TTCCAAACATAAACATCGTT+AGG - tig0019464:96576-96595 None:intergenic 30.0%
! ATGTTTATGTTTGGAACTAC+AGG + tig0019464:96580-96599 Msa1373920:intron 30.0%
!!! AAGTTTTAGGAGAAGTGAAA+AGG + tig0019464:96800-96819 Msa1373920:CDS 30.0%
GAAGTTAGTATTACGTTAAC+GGG + tig0019464:96847-96866 Msa1373920:CDS 30.0%
AGAAACACGGTTAAATGTTA+GGG + tig0019464:96918-96937 Msa1373920:CDS 30.0%
!!! TTTTTTCATTTTCTGGACCT+AGG + tig0019464:96968-96987 Msa1373920:CDS 30.0%
! TTTTTCATTTTCTGGACCTA+GGG + tig0019464:96969-96988 Msa1373920:CDS 30.0%
TTGGGAACGTGAAATTTAAA+GGG + tig0019464:96992-97011 Msa1373920:CDS 30.0%
! ATTTAGGGGTTAAGATTTTG+AGG + tig0019464:97028-97047 Msa1373920:CDS 30.0%
! TTTAGGGGTTAAGATTTTGA+GGG + tig0019464:97029-97048 Msa1373920:CDS 30.0%
GGTTCATAATAAGCATGATA+TGG + tig0019464:97050-97069 Msa1373920:CDS 30.0%
TTCTCATTAATAAGAAACCC+TGG - tig0019464:97087-97106 None:intergenic 30.0%
TCAGCATTAGGATTCAAAAA+TGG - tig0019464:97207-97226 None:intergenic 30.0%
TATCATTTCTCTTGTGTGAA+TGG + tig0019464:98110-98129 Msa1373920:intron 30.0%
! TTAAAGTGTCTAATTGGTCA+TGG - tig0019464:98187-98206 None:intergenic 30.0%
!! ATTCTCTAGAGTGGATAATT+CGG + tig0019464:98551-98570 Msa1373920:intron 30.0%
! AAAAAAGAGGGTCCTTTTAA+AGG - tig0019464:98624-98643 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - tig0019464:98680-98699 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - tig0019464:98803-98822 None:intergenic 30.0%
CATATTTCGTATGAATTGGT+TGG - tig0019464:99181-99200 None:intergenic 30.0%
CAACCAATTCATACGAAATA+TGG + tig0019464:99179-99198 Msa1373920:intron 30.0%
! TATGGTTTATGATTGGTTGA+CGG + tig0019464:99197-99216 Msa1373920:intron 30.0%
ATATGAAGCGACAACTAAAA+GGG + tig0019464:99377-99396 Msa1373920:CDS 30.0%
GCAAGATTTGAATAGGAATA+TGG + tig0019464:99467-99486 Msa1373920:CDS 30.0%
AAGCTAGTTGATTGAATGAA+TGG + tig0019464:99613-99632 Msa1373920:three_prime_UTR 30.0%
TGGTAACATACTGTAATTGT+TGG + tig0019464:99671-99690 Msa1373920:three_prime_UTR 30.0%
TAGTATAGCATAATCAGCTT+CGG - tig0019464:99713-99732 None:intergenic 30.0%
AGTAAGAATGAAGATGGAGT+TGG - tig0019464:95750-95769 None:intergenic 35.0%
! AAGAAAGTGGATTCGGATTT+GGG - tig0019464:95814-95833 None:intergenic 35.0%
!! GTTGTGTTGTTTGGAATTTG+AGG - tig0019464:95858-95877 None:intergenic 35.0%
! TTGTGTGATGGTATTGGATT+GGG - tig0019464:95926-95945 None:intergenic 35.0%
!! ATTGTTTTGTGGGTTGTGAT+TGG - tig0019464:95951-95970 None:intergenic 35.0%
TACTGAACTACCAATCGAAA+AGG + tig0019464:95981-96000 Msa1373920:CDS 35.0%
TTGGATCCATTGGATTCAAA+AGG - tig0019464:96044-96063 None:intergenic 35.0%
AAATGCATCATAACAGGCTT+GGG - tig0019464:96103-96122 None:intergenic 35.0%
ATGGGAAAAATTCAAGGTGT+GGG - tig0019464:96167-96186 None:intergenic 35.0%
CTAACGATGGGAAAAATTCA+AGG - tig0019464:96173-96192 None:intergenic 35.0%
TGTTCGCTCCAATATTTATC+TGG - tig0019464:96285-96304 None:intergenic 35.0%
TCCCTAACGATGTTTATGTT+TGG + tig0019464:96571-96590 Msa1373920:intron 35.0%
TACTGTGACTCATGTTGAAT+GGG + tig0019464:96633-96652 Msa1373920:CDS 35.0%
CAAGGAATGTCTTGGTAAAT+AGG - tig0019464:96685-96704 None:intergenic 35.0%
ACCGATAGACAAACAAAAGA+CGG + tig0019464:96751-96770 Msa1373920:CDS 35.0%
!! ACCGTCTTTTGTTTGTCTAT+CGG - tig0019464:96755-96774 None:intergenic 35.0%
! TCTGCTAGAGAACAAGTTTT+AGG + tig0019464:96787-96806 Msa1373920:CDS 35.0%
CGTTTGATATAGCAGAAACA+CGG + tig0019464:96905-96924 Msa1373920:CDS 35.0%
CAGAAACACGGTTAAATGTT+AGG + tig0019464:96917-96936 Msa1373920:CDS 35.0%
CGGTTAAATGTTAGGGAAAA+TGG + tig0019464:96925-96944 Msa1373920:CDS 35.0%
GTTGGGAACGTGAAATTTAA+AGG + tig0019464:96991-97010 Msa1373920:CDS 35.0%
CGTGAAATTTAAAGGGAGAT+TGG + tig0019464:96999-97018 Msa1373920:CDS 35.0%
GGAGATTGGAGAAACATTTA+GGG + tig0019464:97013-97032 Msa1373920:CDS 35.0%
GAGATTGGAGAAACATTTAG+GGG + tig0019464:97014-97033 Msa1373920:CDS 35.0%
GCAAACTTTAATAACCACTC+AGG - tig0019464:97114-97133 None:intergenic 35.0%
!! GTGGTTATTAAAGTTTGCTG+AGG + tig0019464:97116-97135 Msa1373920:CDS 35.0%
CTGAGGATATTGATATTCCA+TGG + tig0019464:97133-97152 Msa1373920:CDS 35.0%
ATTAAGGGAGGAGGTAATAT+TGG + tig0019464:97544-97563 Msa1373920:intron 35.0%
! GGAATGAGGATTTGCATTTT+TGG - tig0019464:97755-97774 None:intergenic 35.0%
! TGCGTGTTAAAGTGTCTAAT+TGG - tig0019464:98193-98212 None:intergenic 35.0%
! AATAGACACATTCTCTAGAG+TGG + tig0019464:98542-98561 Msa1373920:intron 35.0%
TCTTTGTGGAGTGGATAATT+CGG + tig0019464:98577-98596 Msa1373920:intron 35.0%
TAATTCGGCTGTGTTTATAG+AGG + tig0019464:98592-98611 Msa1373920:intron 35.0%
TAGAGGATGACACCTTTAAA+AGG + tig0019464:98609-98628 Msa1373920:intron 35.0%
AGAGAGAAAAAGTAAGAGAG+AGG + tig0019464:98741-98760 Msa1373920:intron 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + tig0019464:98798-98817 Msa1373920:intron 35.0%
TTAAATGAGTGCGCTATATG+CGG + tig0019464:99071-99090 Msa1373920:intron 35.0%
! CATATGCCTATCGTTTTCAT+TGG + tig0019464:99121-99140 Msa1373920:intron 35.0%
! CCTATCGTTTTCATTGGTAT+GGG + tig0019464:99127-99146 Msa1373920:intron 35.0%
!! GTATAACTTTGATGATGAGC+AGG + tig0019464:99334-99353 Msa1373920:intron 35.0%
GATATGAAGCGACAACTAAA+AGG + tig0019464:99376-99395 Msa1373920:CDS 35.0%
AACTAAAAGGGACATTGCTT+TGG + tig0019464:99389-99408 Msa1373920:CDS 35.0%
TTCAAATCTTGCCTCCAATT+TGG - tig0019464:99459-99478 None:intergenic 35.0%
ATTGGAGGCAAGATTTGAAT+AGG + tig0019464:99460-99479 Msa1373920:CDS 35.0%
AGTAAGAATGAAGATGGAGT+TGG - tig0019464:95750-95769 None:intergenic 35.0%
! AAGAAAGTGGATTCGGATTT+GGG - tig0019464:95814-95833 None:intergenic 35.0%
!! GTTGTGTTGTTTGGAATTTG+AGG - tig0019464:95858-95877 None:intergenic 35.0%
! TTGTGTGATGGTATTGGATT+GGG - tig0019464:95926-95945 None:intergenic 35.0%
!! ATTGTTTTGTGGGTTGTGAT+TGG - tig0019464:95951-95970 None:intergenic 35.0%
TACTGAACTACCAATCGAAA+AGG + tig0019464:95981-96000 Msa1373920:CDS 35.0%
TTGGATCCATTGGATTCAAA+AGG - tig0019464:96044-96063 None:intergenic 35.0%
AAATGCATCATAACAGGCTT+GGG - tig0019464:96103-96122 None:intergenic 35.0%
ATGGGAAAAATTCAAGGTGT+GGG - tig0019464:96167-96186 None:intergenic 35.0%
CTAACGATGGGAAAAATTCA+AGG - tig0019464:96173-96192 None:intergenic 35.0%
TGTTCGCTCCAATATTTATC+TGG - tig0019464:96285-96304 None:intergenic 35.0%
TCCCTAACGATGTTTATGTT+TGG + tig0019464:96571-96590 Msa1373920:intron 35.0%
TACTGTGACTCATGTTGAAT+GGG + tig0019464:96633-96652 Msa1373920:CDS 35.0%
CAAGGAATGTCTTGGTAAAT+AGG - tig0019464:96685-96704 None:intergenic 35.0%
ACCGATAGACAAACAAAAGA+CGG + tig0019464:96751-96770 Msa1373920:CDS 35.0%
!! ACCGTCTTTTGTTTGTCTAT+CGG - tig0019464:96755-96774 None:intergenic 35.0%
! TCTGCTAGAGAACAAGTTTT+AGG + tig0019464:96787-96806 Msa1373920:CDS 35.0%
CGTTTGATATAGCAGAAACA+CGG + tig0019464:96905-96924 Msa1373920:CDS 35.0%
CAGAAACACGGTTAAATGTT+AGG + tig0019464:96917-96936 Msa1373920:CDS 35.0%
CGGTTAAATGTTAGGGAAAA+TGG + tig0019464:96925-96944 Msa1373920:CDS 35.0%
GTTGGGAACGTGAAATTTAA+AGG + tig0019464:96991-97010 Msa1373920:CDS 35.0%
CGTGAAATTTAAAGGGAGAT+TGG + tig0019464:96999-97018 Msa1373920:CDS 35.0%
GGAGATTGGAGAAACATTTA+GGG + tig0019464:97013-97032 Msa1373920:CDS 35.0%
GAGATTGGAGAAACATTTAG+GGG + tig0019464:97014-97033 Msa1373920:CDS 35.0%
GCAAACTTTAATAACCACTC+AGG - tig0019464:97114-97133 None:intergenic 35.0%
!! GTGGTTATTAAAGTTTGCTG+AGG + tig0019464:97116-97135 Msa1373920:CDS 35.0%
CTGAGGATATTGATATTCCA+TGG + tig0019464:97133-97152 Msa1373920:CDS 35.0%
ATTAAGGGAGGAGGTAATAT+TGG + tig0019464:97544-97563 Msa1373920:intron 35.0%
! GGAATGAGGATTTGCATTTT+TGG - tig0019464:97755-97774 None:intergenic 35.0%
! TGCGTGTTAAAGTGTCTAAT+TGG - tig0019464:98193-98212 None:intergenic 35.0%
! AATAGACACATTCTCTAGAG+TGG + tig0019464:98542-98561 Msa1373920:intron 35.0%
TCTTTGTGGAGTGGATAATT+CGG + tig0019464:98577-98596 Msa1373920:intron 35.0%
TAATTCGGCTGTGTTTATAG+AGG + tig0019464:98592-98611 Msa1373920:intron 35.0%
TAGAGGATGACACCTTTAAA+AGG + tig0019464:98609-98628 Msa1373920:intron 35.0%
AGAGAGAAAAAGTAAGAGAG+AGG + tig0019464:98741-98760 Msa1373920:intron 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + tig0019464:98798-98817 Msa1373920:intron 35.0%
TTAAATGAGTGCGCTATATG+CGG + tig0019464:99071-99090 Msa1373920:intron 35.0%
! CATATGCCTATCGTTTTCAT+TGG + tig0019464:99121-99140 Msa1373920:intron 35.0%
! CCTATCGTTTTCATTGGTAT+GGG + tig0019464:99127-99146 Msa1373920:intron 35.0%
!! GTATAACTTTGATGATGAGC+AGG + tig0019464:99334-99353 Msa1373920:intron 35.0%
GATATGAAGCGACAACTAAA+AGG + tig0019464:99376-99395 Msa1373920:CDS 35.0%
AACTAAAAGGGACATTGCTT+TGG + tig0019464:99389-99408 Msa1373920:CDS 35.0%
TTCAAATCTTGCCTCCAATT+TGG - tig0019464:99459-99478 None:intergenic 35.0%
ATTGGAGGCAAGATTTGAAT+AGG + tig0019464:99460-99479 Msa1373920:CDS 35.0%
! GAAGAAAGTGGATTCGGATT+TGG - tig0019464:95815-95834 None:intergenic 40.0%
TCCGAATCCACTTTCTTCTT+CGG + tig0019464:95817-95836 Msa1373920:CDS 40.0%
! TCCGAAGAAGAAAGTGGATT+CGG - tig0019464:95821-95840 None:intergenic 40.0%
! TGTTTGGAATTTGAGGTGGT+TGG - tig0019464:95851-95870 None:intergenic 40.0%
!! GTGTTGTTTGGAATTTGAGG+TGG - tig0019464:95855-95874 None:intergenic 40.0%
! GGGTTATTGGTTGTGTTGTT+TGG - tig0019464:95867-95886 None:intergenic 40.0%
! GTTGTGTGATGGTATTGGAT+TGG - tig0019464:95927-95946 None:intergenic 40.0%
TTGGAGTTGTGTGATGGTAT+TGG - tig0019464:95932-95951 None:intergenic 40.0%
TTGTGATTGGAGTTGTGTGA+TGG - tig0019464:95938-95957 None:intergenic 40.0%
AACTACCAATCGAAAAGGCA+TGG + tig0019464:95986-96005 Msa1373920:CDS 40.0%
AAATCCACGGTGAAGATGAT+TGG + tig0019464:96013-96032 Msa1373920:CDS 40.0%
AATCCACGGTGAAGATGATT+GGG + tig0019464:96014-96033 Msa1373920:CDS 40.0%
GATCGCATTATTGGATCCAT+TGG - tig0019464:96054-96073 None:intergenic 40.0%
CGATCTGAACTAATCCGTTA+TGG + tig0019464:96069-96088 Msa1373920:CDS 40.0%
CAAATGCATCATAACAGGCT+TGG - tig0019464:96104-96123 None:intergenic 40.0%
GATGGGAAAAATTCAAGGTG+TGG - tig0019464:96168-96187 None:intergenic 40.0%
TGTGTGGAAGATCTAACGAT+GGG - tig0019464:96185-96204 None:intergenic 40.0%
ATGTGTGGAAGATCTAACGA+TGG - tig0019464:96186-96205 None:intergenic 40.0%
TCGTTAGATCTTCCACACAT+AGG + tig0019464:96186-96205 Msa1373920:CDS 40.0%
CGTTAGATCTTCCACACATA+GGG + tig0019464:96187-96206 Msa1373920:CDS 40.0%
CTCGATGGCCAGATAAATAT+TGG + tig0019464:96274-96293 Msa1373920:CDS 40.0%
CAACAAAACAGATAGGTGTG+TGG + tig0019464:96346-96365 Msa1373920:intron 40.0%
GTACTGTGACTCATGTTGAA+TGG + tig0019464:96632-96651 Msa1373920:CDS 40.0%
ACGTTAACGGGACATAGTTT+AGG + tig0019464:96859-96878 Msa1373920:CDS 40.0%
CGTTAACGGGACATAGTTTA+GGG + tig0019464:96860-96879 Msa1373920:CDS 40.0%
!! ACATAGTTTAGGGAGTGCTA+TGG + tig0019464:96870-96889 Msa1373920:CDS 40.0%
GGGAGATTGGAGAAACATTT+AGG + tig0019464:97012-97031 Msa1373920:CDS 40.0%
ATAAGAAACCCTGGTGACTT+TGG - tig0019464:97078-97097 None:intergenic 40.0%
TTAATGAGAAATCGCCTGAG+TGG + tig0019464:97097-97116 Msa1373920:CDS 40.0%
TGTTGGAGTTGAGTTAGAGT+TGG + tig0019464:97167-97186 Msa1373920:CDS 40.0%
AACACGCAACAATGATCTTC+AGG + tig0019464:98205-98224 Msa1373920:intron 40.0%
TGATCTTCAGGACTAGAAAG+AGG + tig0019464:98217-98236 Msa1373920:intron 40.0%
GGATAATTCGGATGTCTTTG+TGG + tig0019464:98563-98582 Msa1373920:intron 40.0%
!!! ATTTTCATGAGGTGTCGAGT+TGG + tig0019464:98968-98987 Msa1373920:intron 40.0%
! GCCTATCGTTTTCATTGGTA+TGG + tig0019464:99126-99145 Msa1373920:intron 40.0%
CCCATACCAATGAAAACGAT+AGG - tig0019464:99130-99149 None:intergenic 40.0%
! ATCGTTTTCATTGGTATGGG+CGG + tig0019464:99130-99149 Msa1373920:intron 40.0%
! TAGTTGTCGCTTCATATCCA+CGG - tig0019464:99374-99393 None:intergenic 40.0%
GGACATTGCTTTGGTGAATA+AGG + tig0019464:99398-99417 Msa1373920:CDS 40.0%
AAATCTTGCCTCCAATTTGG+TGG - tig0019464:99456-99475 None:intergenic 40.0%
AATATGGTGAAGACCGAAGA+TGG + tig0019464:99483-99502 Msa1373920:CDS 40.0%
GATGAGTATCTGCAAGTTGT+GGG - tig0019464:99530-99549 None:intergenic 40.0%
TGATGAGTATCTGCAAGTTG+TGG - tig0019464:99531-99550 None:intergenic 40.0%
TGAAGAGATGAGTCCTATCT+GGG - tig0019464:99577-99596 None:intergenic 40.0%
ATGAAGAGATGAGTCCTATC+TGG - tig0019464:99578-99597 None:intergenic 40.0%
! GAAGAAAGTGGATTCGGATT+TGG - tig0019464:95815-95834 None:intergenic 40.0%
TCCGAATCCACTTTCTTCTT+CGG + tig0019464:95817-95836 Msa1373920:CDS 40.0%
! TCCGAAGAAGAAAGTGGATT+CGG - tig0019464:95821-95840 None:intergenic 40.0%
! TGTTTGGAATTTGAGGTGGT+TGG - tig0019464:95851-95870 None:intergenic 40.0%
!! GTGTTGTTTGGAATTTGAGG+TGG - tig0019464:95855-95874 None:intergenic 40.0%
! GGGTTATTGGTTGTGTTGTT+TGG - tig0019464:95867-95886 None:intergenic 40.0%
! GTTGTGTGATGGTATTGGAT+TGG - tig0019464:95927-95946 None:intergenic 40.0%
TTGGAGTTGTGTGATGGTAT+TGG - tig0019464:95932-95951 None:intergenic 40.0%
TTGTGATTGGAGTTGTGTGA+TGG - tig0019464:95938-95957 None:intergenic 40.0%
AACTACCAATCGAAAAGGCA+TGG + tig0019464:95986-96005 Msa1373920:CDS 40.0%
AAATCCACGGTGAAGATGAT+TGG + tig0019464:96013-96032 Msa1373920:CDS 40.0%
AATCCACGGTGAAGATGATT+GGG + tig0019464:96014-96033 Msa1373920:CDS 40.0%
GATCGCATTATTGGATCCAT+TGG - tig0019464:96054-96073 None:intergenic 40.0%
CGATCTGAACTAATCCGTTA+TGG + tig0019464:96069-96088 Msa1373920:CDS 40.0%
CAAATGCATCATAACAGGCT+TGG - tig0019464:96104-96123 None:intergenic 40.0%
GATGGGAAAAATTCAAGGTG+TGG - tig0019464:96168-96187 None:intergenic 40.0%
TGTGTGGAAGATCTAACGAT+GGG - tig0019464:96185-96204 None:intergenic 40.0%
ATGTGTGGAAGATCTAACGA+TGG - tig0019464:96186-96205 None:intergenic 40.0%
TCGTTAGATCTTCCACACAT+AGG + tig0019464:96186-96205 Msa1373920:CDS 40.0%
CGTTAGATCTTCCACACATA+GGG + tig0019464:96187-96206 Msa1373920:CDS 40.0%
CTCGATGGCCAGATAAATAT+TGG + tig0019464:96274-96293 Msa1373920:CDS 40.0%
CAACAAAACAGATAGGTGTG+TGG + tig0019464:96346-96365 Msa1373920:intron 40.0%
GTACTGTGACTCATGTTGAA+TGG + tig0019464:96632-96651 Msa1373920:CDS 40.0%
ACGTTAACGGGACATAGTTT+AGG + tig0019464:96859-96878 Msa1373920:CDS 40.0%
CGTTAACGGGACATAGTTTA+GGG + tig0019464:96860-96879 Msa1373920:CDS 40.0%
!! ACATAGTTTAGGGAGTGCTA+TGG + tig0019464:96870-96889 Msa1373920:CDS 40.0%
GGGAGATTGGAGAAACATTT+AGG + tig0019464:97012-97031 Msa1373920:CDS 40.0%
ATAAGAAACCCTGGTGACTT+TGG - tig0019464:97078-97097 None:intergenic 40.0%
TTAATGAGAAATCGCCTGAG+TGG + tig0019464:97097-97116 Msa1373920:CDS 40.0%
TGTTGGAGTTGAGTTAGAGT+TGG + tig0019464:97167-97186 Msa1373920:CDS 40.0%
AACACGCAACAATGATCTTC+AGG + tig0019464:98205-98224 Msa1373920:intron 40.0%
TGATCTTCAGGACTAGAAAG+AGG + tig0019464:98217-98236 Msa1373920:intron 40.0%
GGATAATTCGGATGTCTTTG+TGG + tig0019464:98563-98582 Msa1373920:intron 40.0%
!!! ATTTTCATGAGGTGTCGAGT+TGG + tig0019464:98968-98987 Msa1373920:intron 40.0%
! GCCTATCGTTTTCATTGGTA+TGG + tig0019464:99126-99145 Msa1373920:intron 40.0%
CCCATACCAATGAAAACGAT+AGG - tig0019464:99130-99149 None:intergenic 40.0%
! ATCGTTTTCATTGGTATGGG+CGG + tig0019464:99130-99149 Msa1373920:intron 40.0%
! TAGTTGTCGCTTCATATCCA+CGG - tig0019464:99374-99393 None:intergenic 40.0%
GGACATTGCTTTGGTGAATA+AGG + tig0019464:99398-99417 Msa1373920:CDS 40.0%
AAATCTTGCCTCCAATTTGG+TGG - tig0019464:99456-99475 None:intergenic 40.0%
AATATGGTGAAGACCGAAGA+TGG + tig0019464:99483-99502 Msa1373920:CDS 40.0%
GATGAGTATCTGCAAGTTGT+GGG - tig0019464:99530-99549 None:intergenic 40.0%
TGATGAGTATCTGCAAGTTG+TGG - tig0019464:99531-99550 None:intergenic 40.0%
TGAAGAGATGAGTCCTATCT+GGG - tig0019464:99577-99596 None:intergenic 40.0%
ATGAAGAGATGAGTCCTATC+TGG - tig0019464:99578-99597 None:intergenic 40.0%
! AGTGGATTCGGATTTGGGAA+AGG - tig0019464:95809-95828 None:intergenic 45.0%
GTTGGATCCGAAGAAGAAAG+TGG - tig0019464:95827-95846 None:intergenic 45.0%
! GAATTTGAGGTGGTTGGAGT+TGG - tig0019464:95845-95864 None:intergenic 45.0%
!! TTGGGTTGTGGTGCATTTTG+TGG - tig0019464:95908-95927 None:intergenic 45.0%
! GATGGTATTGGATTGGGTTG+TGG - tig0019464:95920-95939 None:intergenic 45.0%
!!! GGTTGGCCTTTTGAATCCAA+TGG + tig0019464:96035-96054 Msa1373920:CDS 45.0%
CTTGGGACATCTCTCCATAA+CGG - tig0019464:96086-96105 None:intergenic 45.0%
!! TAACATTTGCTGTGGCGTAG+AGG - tig0019464:96230-96249 None:intergenic 45.0%
! TGGGACGTTAACATTTGCTG+TGG - tig0019464:96238-96257 None:intergenic 45.0%
ATTGGAGCGAACACGCAAAT+TGG + tig0019464:96292-96311 Msa1373920:CDS 45.0%
AGCGAACACGCAAATTGGAT+GGG + tig0019464:96297-96316 Msa1373920:CDS 45.0%
TGTCTGGACAAGGAATGTCT+TGG - tig0019464:96693-96712 None:intergenic 45.0%
TCTACTCGAACATCGTTGTC+TGG - tig0019464:96709-96728 None:intergenic 45.0%
AACGATGTTCGAGTAGAAGC+AGG + tig0019464:96712-96731 Msa1373920:CDS 45.0%
! TCATTTTCTGGACCTAGGGT+TGG + tig0019464:96973-96992 Msa1373920:CDS 45.0%
! CATTTTCTGGACCTAGGGTT+GGG + tig0019464:96974-96993 Msa1373920:CDS 45.0%
AATTTCACGTTCCCAACCCT+AGG - tig0019464:96988-97007 None:intergenic 45.0%
! ATATGGTGCCAAAGTCACCA+GGG + tig0019464:97067-97086 Msa1373920:CDS 45.0%
CCAACATGAGTGTAACACCA+TGG - tig0019464:97153-97172 None:intergenic 45.0%
!! CCATGGTGTTACACTCATGT+TGG + tig0019464:97150-97169 Msa1373920:CDS 45.0%
TGCTGCATGTGCTCATAACT+TGG + tig0019464:97227-97246 Msa1373920:CDS 45.0%
TGCATGTGCTCATAACTTGG+AGG + tig0019464:97230-97249 Msa1373920:CDS 45.0%
AGATGCACATGCAAAATGCG+TGG - tig0019464:97306-97325 None:intergenic 45.0%
GTCATGGATCAATGCACCAT+TGG - tig0019464:97437-97456 None:intergenic 45.0%
CGATCGTTATCTATCGTGTC+CGG + tig0019464:98147-98166 Msa1373920:intron 45.0%
GATCGTTATCTATCGTGTCC+GGG + tig0019464:98148-98167 Msa1373920:intron 45.0%
ATCGTTATCTATCGTGTCCG+GGG + tig0019464:98149-98168 Msa1373920:intron 45.0%
ACTAGAAAGAGGTCCCCTTA+CGG + tig0019464:98228-98247 Msa1373920:intron 45.0%
ACCTATGATAGGTCCGTAAG+GGG - tig0019464:98244-98263 None:intergenic 45.0%
GACCTATGATAGGTCCGTAA+GGG - tig0019464:98245-98264 None:intergenic 45.0%
TGACCTATGATAGGTCCGTA+AGG - tig0019464:98246-98265 None:intergenic 45.0%
TAAGGACGGTGACCTATGAT+AGG - tig0019464:98255-98274 None:intergenic 45.0%
ATTCGGATGTCTTTGTGGAG+TGG + tig0019464:98568-98587 Msa1373920:intron 45.0%
!! TTGATGATGAGCAGGTACCA+TGG + tig0019464:99342-99361 Msa1373920:intron 45.0%
! TGATGATGAGCAGGTACCAT+GGG + tig0019464:99343-99362 Msa1373920:intron 45.0%
AGTCCTATCTGGGAGAGATA+AGG - tig0019464:99567-99586 None:intergenic 45.0%
! AGTGGATTCGGATTTGGGAA+AGG - tig0019464:95809-95828 None:intergenic 45.0%
GTTGGATCCGAAGAAGAAAG+TGG - tig0019464:95827-95846 None:intergenic 45.0%
! GAATTTGAGGTGGTTGGAGT+TGG - tig0019464:95845-95864 None:intergenic 45.0%
!! TTGGGTTGTGGTGCATTTTG+TGG - tig0019464:95908-95927 None:intergenic 45.0%
! GATGGTATTGGATTGGGTTG+TGG - tig0019464:95920-95939 None:intergenic 45.0%
!!! GGTTGGCCTTTTGAATCCAA+TGG + tig0019464:96035-96054 Msa1373920:CDS 45.0%
CTTGGGACATCTCTCCATAA+CGG - tig0019464:96086-96105 None:intergenic 45.0%
!! TAACATTTGCTGTGGCGTAG+AGG - tig0019464:96230-96249 None:intergenic 45.0%
! TGGGACGTTAACATTTGCTG+TGG - tig0019464:96238-96257 None:intergenic 45.0%
ATTGGAGCGAACACGCAAAT+TGG + tig0019464:96292-96311 Msa1373920:CDS 45.0%
AGCGAACACGCAAATTGGAT+GGG + tig0019464:96297-96316 Msa1373920:CDS 45.0%
TGTCTGGACAAGGAATGTCT+TGG - tig0019464:96693-96712 None:intergenic 45.0%
TCTACTCGAACATCGTTGTC+TGG - tig0019464:96709-96728 None:intergenic 45.0%
AACGATGTTCGAGTAGAAGC+AGG + tig0019464:96712-96731 Msa1373920:CDS 45.0%
! TCATTTTCTGGACCTAGGGT+TGG + tig0019464:96973-96992 Msa1373920:CDS 45.0%
! CATTTTCTGGACCTAGGGTT+GGG + tig0019464:96974-96993 Msa1373920:CDS 45.0%
AATTTCACGTTCCCAACCCT+AGG - tig0019464:96988-97007 None:intergenic 45.0%
! ATATGGTGCCAAAGTCACCA+GGG + tig0019464:97067-97086 Msa1373920:CDS 45.0%
CCAACATGAGTGTAACACCA+TGG - tig0019464:97153-97172 None:intergenic 45.0%
!! CCATGGTGTTACACTCATGT+TGG + tig0019464:97150-97169 Msa1373920:CDS 45.0%
TGCTGCATGTGCTCATAACT+TGG + tig0019464:97227-97246 Msa1373920:CDS 45.0%
TGCATGTGCTCATAACTTGG+AGG + tig0019464:97230-97249 Msa1373920:CDS 45.0%
AGATGCACATGCAAAATGCG+TGG - tig0019464:97306-97325 None:intergenic 45.0%
GTCATGGATCAATGCACCAT+TGG - tig0019464:97437-97456 None:intergenic 45.0%
CGATCGTTATCTATCGTGTC+CGG + tig0019464:98147-98166 Msa1373920:intron 45.0%
GATCGTTATCTATCGTGTCC+GGG + tig0019464:98148-98167 Msa1373920:intron 45.0%
ATCGTTATCTATCGTGTCCG+GGG + tig0019464:98149-98168 Msa1373920:intron 45.0%
ACTAGAAAGAGGTCCCCTTA+CGG + tig0019464:98228-98247 Msa1373920:intron 45.0%
ACCTATGATAGGTCCGTAAG+GGG - tig0019464:98244-98263 None:intergenic 45.0%
GACCTATGATAGGTCCGTAA+GGG - tig0019464:98245-98264 None:intergenic 45.0%
TGACCTATGATAGGTCCGTA+AGG - tig0019464:98246-98265 None:intergenic 45.0%
TAAGGACGGTGACCTATGAT+AGG - tig0019464:98255-98274 None:intergenic 45.0%
ATTCGGATGTCTTTGTGGAG+TGG + tig0019464:98568-98587 Msa1373920:intron 45.0%
!! TTGATGATGAGCAGGTACCA+TGG + tig0019464:99342-99361 Msa1373920:intron 45.0%
! TGATGATGAGCAGGTACCAT+GGG + tig0019464:99343-99362 Msa1373920:intron 45.0%
AGTCCTATCTGGGAGAGATA+AGG - tig0019464:99567-99586 None:intergenic 45.0%
!!! TTTGAAATAAAAAAATATTA+AGG + tig0019464:97528-97547 Msa1373920:intron 5.0%
!! TTGAAATAAAAAAATATTAA+GGG + tig0019464:97529-97548 Msa1373920:intron 5.0%
!! TTTAATTAATTTATTAAGTT+GGG - tig0019464:98854-98873 None:intergenic 5.0%
!!! TTTTAATTAATTTATTAAGT+TGG - tig0019464:98855-98874 None:intergenic 5.0%
!!! TTTGAAATAAAAAAATATTA+AGG + tig0019464:97528-97547 Msa1373920:intron 5.0%
!! TTGAAATAAAAAAATATTAA+GGG + tig0019464:97529-97548 Msa1373920:intron 5.0%
!! TTTAATTAATTTATTAAGTT+GGG - tig0019464:98854-98873 None:intergenic 5.0%
!!! TTTTAATTAATTTATTAAGT+TGG - tig0019464:98855-98874 None:intergenic 5.0%
! TTGCGCCATGCCTTTTCGAT+TGG - tig0019464:95994-96013 None:intergenic 50.0%
AAGGCATGGCGCAAAATCCA+CGG + tig0019464:96000-96019 Msa1373920:CDS 50.0%
CAACCCAATCATCTTCACCG+TGG - tig0019464:96020-96039 None:intergenic 50.0%
CACGGTGAAGATGATTGGGT+TGG + tig0019464:96018-96037 Msa1373920:CDS 50.0%
GTCACGTCATACCCTATGTG+TGG - tig0019464:96201-96220 None:intergenic 50.0%
GAGCGAACACGCAAATTGGA+TGG + tig0019464:96296-96315 Msa1373920:CDS 50.0%
CGAACATCGTTGTCTGGACA+AGG - tig0019464:96703-96722 None:intergenic 50.0%
! GATATGGTGCCAAAGTCACC+AGG + tig0019464:97066-97085 Msa1373920:CDS 50.0%
GCACATGCAGCATCAGCATT+AGG - tig0019464:97219-97238 None:intergenic 50.0%
CCCATCGAGTATGTGCAAGT+GGG - tig0019464:97256-97275 None:intergenic 50.0%
CCCACTTGCACATACTCGAT+GGG + tig0019464:97253-97272 Msa1373920:CDS 50.0%
ACCCATCGAGTATGTGCAAG+TGG - tig0019464:97257-97276 None:intergenic 50.0%
TCGTTATCTATCGTGTCCGG+GGG + tig0019464:98150-98169 Msa1373920:intron 50.0%
TCCCCTTACGGACCTATCAT+AGG + tig0019464:98240-98259 Msa1373920:intron 50.0%
AGCACTCTGTGCCACCAAAT+TGG + tig0019464:99442-99461 Msa1373920:CDS 50.0%
ACTCTGTGCCACCAAATTGG+AGG + tig0019464:99445-99464 Msa1373920:CDS 50.0%
TGAAGACCGAAGATGGACGT+TGG + tig0019464:99490-99509 Msa1373920:CDS 50.0%
GAAGACCGAAGATGGACGTT+GGG + tig0019464:99491-99510 Msa1373920:CDS 50.0%
! GAGCCTTATCTCTCCCAGAT+AGG + tig0019464:99561-99580 Msa1373920:CDS 50.0%
! TTGCGCCATGCCTTTTCGAT+TGG - tig0019464:95994-96013 None:intergenic 50.0%
AAGGCATGGCGCAAAATCCA+CGG + tig0019464:96000-96019 Msa1373920:CDS 50.0%
CAACCCAATCATCTTCACCG+TGG - tig0019464:96020-96039 None:intergenic 50.0%
CACGGTGAAGATGATTGGGT+TGG + tig0019464:96018-96037 Msa1373920:CDS 50.0%
GTCACGTCATACCCTATGTG+TGG - tig0019464:96201-96220 None:intergenic 50.0%
GAGCGAACACGCAAATTGGA+TGG + tig0019464:96296-96315 Msa1373920:CDS 50.0%
CGAACATCGTTGTCTGGACA+AGG - tig0019464:96703-96722 None:intergenic 50.0%
! GATATGGTGCCAAAGTCACC+AGG + tig0019464:97066-97085 Msa1373920:CDS 50.0%
GCACATGCAGCATCAGCATT+AGG - tig0019464:97219-97238 None:intergenic 50.0%
CCCATCGAGTATGTGCAAGT+GGG - tig0019464:97256-97275 None:intergenic 50.0%
CCCACTTGCACATACTCGAT+GGG + tig0019464:97253-97272 Msa1373920:CDS 50.0%
ACCCATCGAGTATGTGCAAG+TGG - tig0019464:97257-97276 None:intergenic 50.0%
TCGTTATCTATCGTGTCCGG+GGG + tig0019464:98150-98169 Msa1373920:intron 50.0%
TCCCCTTACGGACCTATCAT+AGG + tig0019464:98240-98259 Msa1373920:intron 50.0%
AGCACTCTGTGCCACCAAAT+TGG + tig0019464:99442-99461 Msa1373920:CDS 50.0%
ACTCTGTGCCACCAAATTGG+AGG + tig0019464:99445-99464 Msa1373920:CDS 50.0%
TGAAGACCGAAGATGGACGT+TGG + tig0019464:99490-99509 Msa1373920:CDS 50.0%
GAAGACCGAAGATGGACGTT+GGG + tig0019464:99491-99510 Msa1373920:CDS 50.0%
! GAGCCTTATCTCTCCCAGAT+AGG + tig0019464:99561-99580 Msa1373920:CDS 50.0%
GTAGAGACGTCGTCGTTGCT+TGG + tig0019464:96605-96624 Msa1373920:CDS 55.0%
GCCCACTTGCACATACTCGA+TGG + tig0019464:97252-97271 Msa1373920:CDS 55.0%
TATCGTGTCCGGGGGTTTGA+GGG + tig0019464:98158-98177 Msa1373920:intron 55.0%
CATATCCACGGTTGCTCCCA+TGG - tig0019464:99362-99381 None:intergenic 55.0%
CAGCACCCAACGTCCATCTT+CGG - tig0019464:99499-99518 None:intergenic 55.0%
GTAGAGACGTCGTCGTTGCT+TGG + tig0019464:96605-96624 Msa1373920:CDS 55.0%
GCCCACTTGCACATACTCGA+TGG + tig0019464:97252-97271 Msa1373920:CDS 55.0%
TATCGTGTCCGGGGGTTTGA+GGG + tig0019464:98158-98177 Msa1373920:intron 55.0%
CATATCCACGGTTGCTCCCA+TGG - tig0019464:99362-99381 None:intergenic 55.0%
CAGCACCCAACGTCCATCTT+CGG - tig0019464:99499-99518 None:intergenic 55.0%
CTATCGTGTCCGGGGGTTTG+AGG + tig0019464:98157-98176 Msa1373920:intron 60.0%
ATCGTGTCCGGGGGTTTGAG+GGG + tig0019464:98159-98178 Msa1373920:intron 60.0%
AGGTACCATGGGAGCAACCG+TGG + tig0019464:99354-99373 Msa1373920:intron 60.0%
CGAAGATGGACGTTGGGTGC+TGG + tig0019464:99497-99516 Msa1373920:CDS 60.0%
CTATCGTGTCCGGGGGTTTG+AGG + tig0019464:98157-98176 Msa1373920:intron 60.0%
ATCGTGTCCGGGGGTTTGAG+GGG + tig0019464:98159-98178 Msa1373920:intron 60.0%
AGGTACCATGGGAGCAACCG+TGG + tig0019464:99354-99373 Msa1373920:intron 60.0%
CGAAGATGGACGTTGGGTGC+TGG + tig0019464:99497-99516 Msa1373920:CDS 60.0%
GACGTCGTCGTTGCTTGGCG+AGG + tig0019464:96610-96629 Msa1373920:CDS 65.0%
TCGTGTCCGGGGGTTTGAGG+GGG + tig0019464:98160-98179 Msa1373920:intron 65.0%
CATGGTCCCCCTCAAACCCC+CGG - tig0019464:98169-98188 None:intergenic 65.0%
GACGTCGTCGTTGCTTGGCG+AGG + tig0019464:96610-96629 Msa1373920:CDS 65.0%
TCGTGTCCGGGGGTTTGAGG+GGG + tig0019464:98160-98179 Msa1373920:intron 65.0%
CATGGTCCCCCTCAAACCCC+CGG - tig0019464:98169-98188 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0019464 gene 95719 99817 95719 ID=Msa1373920;Name=Msa1373920
tig0019464 mRNA 95719 99817 95719 ID=Msa1373920-mRNA-1;Parent=Msa1373920;Name=Msa1373920-mRNA-1;_AED=0.26;_eAED=0.26;_QI=56|1|1|1|1|1|3|209|503
tig0019464 exon 95719 96360 95719 ID=Msa1373920-mRNA-1:exon:3607;Parent=Msa1373920-mRNA-1
tig0019464 exon 96602 97274 96602 ID=Msa1373920-mRNA-1:exon:3608;Parent=Msa1373920-mRNA-1
tig0019464 exon 99356 99817 99356 ID=Msa1373920-mRNA-1:exon:3609;Parent=Msa1373920-mRNA-1
tig0019464 five_prime_UTR 95719 95774 95719 ID=Msa1373920-mRNA-1:five_prime_utr;Parent=Msa1373920-mRNA-1
tig0019464 CDS 95775 96360 95775 ID=Msa1373920-mRNA-1:cds;Parent=Msa1373920-mRNA-1
tig0019464 CDS 96602 97274 96602 ID=Msa1373920-mRNA-1:cds;Parent=Msa1373920-mRNA-1
tig0019464 CDS 99356 99608 99356 ID=Msa1373920-mRNA-1:cds;Parent=Msa1373920-mRNA-1
tig0019464 three_prime_UTR 99609 99817 99609 ID=Msa1373920-mRNA-1:three_prime_utr;Parent=Msa1373920-mRNA-1
Gene Sequence

>Msa1373920

ATGGCTGTATCAATCTCAAACATGCTCATAGCCTTTCCCAAATCCGAATCCACTTTCTTCTTCGGATCCAACTCCAACCACCTCAAATTCCAAACAACACAACCAATAACCCTAACAACAAAAAAACTCACCACAAAATGCACCACAACCCAATCCAATACCATCACACAACTCCAATCACAACCCACAAAACAATCATCAAAACTTACTGAACTACCAATCGAAAAGGCATGGCGCAAAATCCACGGTGAAGATGATTGGGTTGGCCTTTTGAATCCAATGGATCCAATAATGCGATCTGAACTAATCCGTTATGGAGAGATGTCCCAAGCCTGTTATGATGCATTTGATTTTGATCCATATTCAAAATATTGTGGTAGTTGCAAACACCCACACCTTGAATTTTTCCCATCGTTAGATCTTCCACACATAGGGTATGACGTGACACGCTACCTCTACGCCACAGCAAATGTTAACGTCCCAGATTTCTTTAAGAAATCTCGATGGCCAGATAAATATTGGAGCGAACACGCAAATTGGATGGGATACATAGCCGTTTCAAACGATGAAACAACAAAACAGATAGGTCGTAGAGACGTCGTCGTTGCTTGGCGAGGTACTGTGACTCATGTTGAATGGGTAGCCAATCTTCAAAATTTTCTTAAACCTATTTACCAAGACATTCCTTGTCCAGACAACGATGTTCGAGTAGAAGCAGGTTTTCTTGATATGTACACCGATAGACAAACAAAAGACGGTTATTGCAAATATTCTGCTAGAGAACAAGTTTTAGGAGAAGTGAAAAGGTTGTTAGAGAAATTTCCTAATGAAGAAGTTAGTATTACGTTAACGGGACATAGTTTAGGGAGTGCTATGGCAACATTAAGTGCGTTTGATATAGCAGAAACACGGTTAAATGTTAGGGAAAATGGTGAAAAAATCCATGTTTCTGTTTTTTCATTTTCTGGACCTAGGGTTGGGAACGTGAAATTTAAAGGGAGATTGGAGAAACATTTAGGGGTTAAGATTTTGAGGGTTCATAATAAGCATGATATGGTGCCAAAGTCACCAGGGTTTCTTATTAATGAGAAATCGCCTGAGTGGTTATTAAAGTTTGCTGAGGATATTGATATTCCATGGTGTTACACTCATGTTGGAGTTGAGTTAGAGTTGGACCACAAAATTTCTCCATTTTTGAATCCTAATGCTGATGCTGCATGTGCTCATAACTTGGAGGCCCACTTGCACATACTCGATGGGTACCATGGGAGCAACCGTGGATATGAAGCGACAACTAAAAGGGACATTGCTTTGGTGAATAAGGCTTGTGACTTTGTGAAAGATGAGCACTCTGTGCCACCAAATTGGAGGCAAGATTTGAATAGGAATATGGTGAAGACCGAAGATGGACGTTGGGTGCTGGCTCAACGCCCACAACTTGCAGATACTCATCATGAAGACATTGAGCCTTATCTCTCCCAGATAGGACTCATCTCTTCATCTAATAAATAA

Protein sequence

>Msa1373920

MAVSISNMLIAFPKSESTFFFGSNSNHLKFQTTQPITLTTKKLTTKCTTTQSNTITQLQSQPTKQSSKLTELPIEKAWRKIHGEDDWVGLLNPMDPIMRSELIRYGEMSQACYDAFDFDPYSKYCGSCKHPHLEFFPSLDLPHIGYDVTRYLYATANVNVPDFFKKSRWPDKYWSEHANWMGYIAVSNDETTKQIGRRDVVVAWRGTVTHVEWVANLQNFLKPIYQDIPCPDNDVRVEAGFLDMYTDRQTKDGYCKYSAREQVLGEVKRLLEKFPNEEVSITLTGHSLGSAMATLSAFDIAETRLNVRENGEKIHVSVFSFSGPRVGNVKFKGRLEKHLGVKILRVHNKHDMVPKSPGFLINEKSPEWLLKFAEDIDIPWCYTHVGVELELDHKISPFLNPNADAACAHNLEAHLHILDGYHGSNRGYEATTKRDIALVNKACDFVKDEHSVPPNWRQDLNRNMVKTEDGRWVLAQRPQLADTHHEDIEPYLSQIGLISSSNK*