Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608330 | XP_024638413.1 | 97.543 | 529 | 13 | 0 | 1 | 529 | 1 | 529 | 0.0 | 1076 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608330 | sp|F4IVI0|BUB1_ARATH | 59.693 | 521 | 207 | 2 | 12 | 529 | 5 | 525 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0608330 | 0.814702 | 1.346711e-51 | -8.615850e-47 |
| Msa0002580 | Msa0608330 | 0.810351 | 1.203845e-50 | -8.615850e-47 |
| Msa0005890 | Msa0608330 | 0.814974 | 1.171956e-51 | -8.615850e-47 |
| Msa0021500 | Msa0608330 | 0.800380 | 1.480942e-48 | -8.615850e-47 |
| Msa0025580 | Msa0608330 | 0.803408 | 3.536888e-49 | -8.615850e-47 |
| Msa0027280 | Msa0608330 | 0.827809 | 1.274229e-54 | -8.615850e-47 |
| Msa0030370 | Msa0608330 | 0.803189 | 3.924576e-49 | -8.615850e-47 |
| Msa0035340 | Msa0608330 | 0.800021 | 1.752463e-48 | -8.615850e-47 |
| Msa0036870 | Msa0608330 | 0.816281 | 5.994746e-52 | -8.615850e-47 |
| Msa0048510 | Msa0608330 | 0.826960 | 2.035983e-54 | -8.615850e-47 |
| Msa0052260 | Msa0608330 | 0.804764 | 1.847006e-49 | -8.615850e-47 |
| Msa0054690 | Msa0608330 | 0.825448 | 4.662646e-54 | -8.615850e-47 |
| Msa0056180 | Msa0608330 | 0.808959 | 2.396977e-50 | -8.615850e-47 |
| Msa0068150 | Msa0608330 | 0.805988 | 1.022935e-49 | -8.615850e-47 |
| Msa0090400 | Msa0608330 | 0.834547 | 2.814522e-56 | -8.615850e-47 |
| Msa0094780 | Msa0608330 | 0.817573 | 3.074260e-52 | -8.615850e-47 |
| Msa0603980 | Msa0608330 | 0.801700 | 7.957537e-49 | -8.615850e-47 |
| Msa0606100 | Msa0608330 | 0.827514 | 1.499958e-54 | -8.615850e-47 |
| Msa0608330 | Msa0621710 | 0.809891 | 1.512311e-50 | -8.615850e-47 |
| Msa0608330 | Msa0624900 | 0.809191 | 2.137116e-50 | -8.615850e-47 |
| Msa0608330 | Msa0658640 | 0.842009 | 3.358707e-58 | -8.615850e-47 |
| Msa0608330 | Msa0661150 | 0.814127 | 1.804611e-51 | -8.615850e-47 |
| Msa0608330 | Msa0666700 | 0.837842 | 4.095016e-57 | -8.615850e-47 |
| Msa0608330 | Msa0703600 | 0.835338 | 1.778825e-56 | -8.615850e-47 |
| Msa0608330 | Msa0709200 | 0.835361 | 1.755275e-56 | -8.615850e-47 |
| Msa0608330 | Msa0709440 | 0.811138 | 8.131543e-51 | -8.615850e-47 |
| Msa0608330 | Msa0714790 | 0.814124 | 1.807442e-51 | -8.615850e-47 |
| Msa0608330 | Msa0721080 | 0.806485 | 8.040475e-50 | -8.615850e-47 |
| Msa0608330 | Msa0735780 | 0.843267 | 1.556521e-58 | -8.615850e-47 |
| Msa0608330 | Msa0740710 | 0.820050 | 8.419476e-53 | -8.615850e-47 |
| Msa0608330 | Msa0755760 | 0.805849 | 1.094418e-49 | -8.615850e-47 |
| Msa0608330 | Msa0756590 | 0.802796 | 4.733319e-49 | -8.615850e-47 |
| Msa0608330 | Msa0756820 | 0.803196 | 3.912291e-49 | -8.615850e-47 |
| Msa0608330 | Msa0761670 | 0.818667 | 1.738860e-52 | -8.615850e-47 |
| Msa0608330 | Msa0773630 | 0.818001 | 2.461979e-52 | -8.615850e-47 |
| Msa0608330 | Msa0777750 | 0.845353 | 4.282616e-59 | -8.615850e-47 |
| Msa0608330 | Msa0780910 | 0.817117 | 3.894184e-52 | -8.615850e-47 |
| Msa0608330 | Msa0791730 | 0.803125 | 4.046853e-49 | -8.615850e-47 |
| Msa0608330 | Msa0795870 | 0.851513 | 8.451428e-61 | -8.615850e-47 |
| Msa0608330 | Msa0811020 | 0.812759 | 3.607089e-51 | -8.615850e-47 |
| Msa0608330 | Msa0815920 | 0.807390 | 5.173844e-50 | -8.615850e-47 |
| Msa0608330 | Msa0824450 | 0.840966 | 6.323586e-58 | -8.615850e-47 |
| Msa0608330 | Msa0833650 | 0.849905 | 2.395061e-60 | -8.615850e-47 |
| Msa0608330 | Msa0836150 | 0.817468 | 3.246548e-52 | -8.615850e-47 |
| Msa0608330 | Msa0843050 | 0.819378 | 1.198827e-52 | -8.615850e-47 |
| Msa0608330 | Msa0888790 | 0.801970 | 7.003593e-49 | -8.615850e-47 |
| Msa0608330 | Msa0915520 | 0.813127 | 2.996093e-51 | -8.615850e-47 |
| Msa0608330 | Msa0966320 | 0.812371 | 4.384287e-51 | -8.615850e-47 |
| Msa0608330 | Msa0966480 | 0.804062 | 2.586449e-49 | -8.615850e-47 |
| Msa0608330 | Msa0997920 | 0.802273 | 6.067902e-49 | -8.615850e-47 |
| Msa0608330 | Msa1081390 | 0.816872 | 4.420208e-52 | -8.615850e-47 |
| Msa0608330 | Msa1082200 | 0.808431 | 3.107042e-50 | -8.615850e-47 |
| Msa0608330 | Msa1084530 | 0.815404 | 9.405149e-52 | -8.615850e-47 |
| Msa0608330 | Msa1090140 | 0.832330 | 1.005595e-55 | -8.615850e-47 |
| Msa0608330 | Msa1116220 | 0.824506 | 7.777993e-54 | -8.615850e-47 |
| Msa0608330 | Msa1116660 | 0.821691 | 3.528957e-53 | -8.615850e-47 |
| Msa0608330 | Msa1125820 | 0.814321 | 1.635511e-51 | -8.615850e-47 |
| Msa0608330 | Msa1125990 | 0.819448 | 1.155118e-52 | -8.615850e-47 |
| Msa0608330 | Msa1132530 | 0.811349 | 7.318623e-51 | -8.615850e-47 |
| Msa0608330 | Msa1132840 | 0.855910 | 4.593573e-62 | -8.615850e-47 |
| Msa0608330 | Msa1154100 | 0.801082 | 1.064970e-48 | -8.615850e-47 |
| Msa0608330 | Msa1171290 | 0.809677 | 1.681289e-50 | -8.615850e-47 |
| Msa0608330 | Msa1192570 | 0.825694 | 4.077330e-54 | -8.615850e-47 |
| Msa0608330 | Msa1208950 | 0.820516 | 6.581170e-53 | -8.615850e-47 |
| Msa0608330 | Msa1215870 | 0.817595 | 3.039742e-52 | -8.615850e-47 |
| Msa0608330 | Msa1225690 | 0.852346 | 4.902333e-61 | -8.615850e-47 |
| Msa0608330 | Msa1226520 | 0.850613 | 1.516584e-60 | -8.615850e-47 |
| Msa0608330 | Msa1240770 | 0.814017 | 1.908022e-51 | -8.615850e-47 |
| Msa0608330 | Msa1244240 | 0.806050 | 9.926743e-50 | -8.615850e-47 |
| Msa0608330 | Msa1263780 | 0.809531 | 1.806815e-50 | -8.615850e-47 |
| Msa0608330 | Msa1265650 | 0.810933 | 9.008321e-51 | -8.615850e-47 |
| Msa0608330 | Msa1268630 | 0.804724 | 1.883181e-49 | -8.615850e-47 |
| Msa0608330 | Msa1303560 | 0.806457 | 8.148314e-50 | -8.615850e-47 |
| Msa0608330 | Msa1303650 | 0.818262 | 2.148983e-52 | -8.615850e-47 |
| Msa0608330 | Msa1343170 | 0.827521 | 1.494524e-54 | -8.615850e-47 |
| Msa0608330 | Msa1343180 | 0.845403 | 4.150461e-59 | -8.615850e-47 |
| Msa0608330 | Msa1359690 | 0.821980 | 3.025808e-53 | -8.615850e-47 |
| Msa0608330 | Msa1364410 | 0.806067 | 9.847537e-50 | -8.615850e-47 |
| Msa0608330 | Msa1372040 | 0.813883 | 2.042493e-51 | -8.615850e-47 |
| Msa0608330 | Msa1397400 | 0.804313 | 2.293974e-49 | -8.615850e-47 |
| Msa0608330 | Msa1405460 | 0.814892 | 1.222406e-51 | -8.615850e-47 |
| Msa0608330 | Msa1437930 | 0.832148 | 1.114936e-55 | -8.615850e-47 |
| Msa0608330 | Msa1450190 | 0.804564 | 2.033195e-49 | -8.615850e-47 |
| Msa0123070 | Msa0608330 | 0.810017 | 1.420361e-50 | -8.615850e-47 |
| Msa0136650 | Msa0608330 | 0.809446 | 1.884417e-50 | -8.615850e-47 |
| Msa0140280 | Msa0608330 | 0.808243 | 3.408886e-50 | -8.615850e-47 |
| Msa0146040 | Msa0608330 | 0.807123 | 5.895062e-50 | -8.615850e-47 |
| Msa0173730 | Msa0608330 | 0.828574 | 8.335757e-55 | -8.615850e-47 |
| Msa0188610 | Msa0608330 | 0.804337 | 2.267223e-49 | -8.615850e-47 |
| Msa0190570 | Msa0608330 | 0.855938 | 4.507815e-62 | -8.615850e-47 |
| Msa0200050 | Msa0608330 | 0.835667 | 1.468697e-56 | -8.615850e-47 |
| Msa0209980 | Msa0608330 | 0.822833 | 1.917007e-53 | -8.615850e-47 |
| Msa0213030 | Msa0608330 | 0.814289 | 1.662157e-51 | -8.615850e-47 |
| Msa0225860 | Msa0608330 | 0.830226 | 3.308351e-55 | -8.615850e-47 |
| Msa0369790 | Msa0608330 | 0.822254 | 2.613194e-53 | -8.615850e-47 |
| Msa0380620 | Msa0608330 | 0.813917 | 2.007890e-51 | -8.615850e-47 |
| Msa0380670 | Msa0608330 | 0.816576 | 5.149649e-52 | -8.615850e-47 |
| Msa0400950 | Msa0608330 | 0.810943 | 8.962724e-51 | -8.615850e-47 |
| Msa0430260 | Msa0608330 | 0.810852 | 9.381346e-51 | -8.615850e-47 |
| Msa0430300 | Msa0608330 | 0.802481 | 5.497109e-49 | -8.615850e-47 |
| Msa0436910 | Msa0608330 | 0.822862 | 1.887185e-53 | -8.615850e-47 |
| Msa0464000 | Msa0608330 | 0.820526 | 6.547862e-53 | -8.615850e-47 |
| Msa0481890 | Msa0608330 | 0.810066 | 1.386716e-50 | -8.615850e-47 |
| Msa0242590 | Msa0608330 | 0.847959 | 8.311592e-60 | -8.615850e-47 |
| Msa0244640 | Msa0608330 | 0.810374 | 1.189942e-50 | -8.615850e-47 |
| Msa0270340 | Msa0608330 | 0.803598 | 3.229271e-49 | -8.615850e-47 |
| Msa0280790 | Msa0608330 | 0.845667 | 3.519551e-59 | -8.615850e-47 |
| Msa0287740 | Msa0608330 | 0.800867 | 1.178207e-48 | -8.615850e-47 |
| Msa0292160 | Msa0608330 | 0.800057 | 1.722724e-48 | -8.615850e-47 |
| Msa0298470 | Msa0608330 | 0.816175 | 6.332066e-52 | -8.615850e-47 |
| Msa0340500 | Msa0608330 | 0.808945 | 2.413063e-50 | -8.615850e-47 |
| Msa0506950 | Msa0608330 | 0.815023 | 1.142937e-51 | -8.615850e-47 |
| Msa0509550 | Msa0608330 | 0.805308 | 1.421579e-49 | -8.615850e-47 |
| Msa0529030 | Msa0608330 | 0.819497 | 1.125934e-52 | -8.615850e-47 |
| Msa0531960 | Msa0608330 | 0.815388 | 9.481970e-52 | -8.615850e-47 |
| Msa0548470 | Msa0608330 | 0.808809 | 2.580775e-50 | -8.615850e-47 |
| Msa0557460 | Msa0608330 | 0.829937 | 3.890987e-55 | -8.615850e-47 |
| Msa0563740 | Msa0608330 | 0.818917 | 1.525730e-52 | -8.615850e-47 |
| Msa0567170 | Msa0608330 | 0.841881 | 3.630312e-58 | -8.615850e-47 |
| Msa0580200 | Msa0608330 | 0.814989 | 1.163241e-51 | -8.615850e-47 |
| Msa0580370 | Msa0608330 | 0.851255 | 9.994470e-61 | -8.615850e-47 |
| Msa0588920 | Msa0608330 | 0.801769 | 7.699619e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608330 | MtrunA17_Chr4g0040351 | 97.543 | 529 | 13 | 0 | 1 | 529 | 1 | 529 | 0.0 | 1076 |
| Msa0608330 | MtrunA17_Chr3g0113931 | 31.757 | 148 | 98 | 2 | 17 | 162 | 21 | 167 | 8.26e-18 | 86.3 |
| Msa0608330 | MtrunA17_Chr1g0162841 | 31.250 | 128 | 87 | 1 | 17 | 143 | 78 | 205 | 1.77e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608330 | AT2G20635.1 | 59.693 | 521 | 207 | 2 | 12 | 529 | 5 | 525 | 0.0 | 661 |
| Msa0608330 | AT5G05510.1 | 30.556 | 144 | 96 | 3 | 18 | 159 | 26 | 167 | 4.58e-16 | 81.3 |
| Msa0608330 | AT2G33560.2 | 28.571 | 154 | 102 | 2 | 17 | 169 | 79 | 225 | 1.41e-13 | 73.2 |
| Msa0608330 | AT2G33560.1 | 27.922 | 154 | 102 | 2 | 17 | 169 | 79 | 224 | 6.73e-13 | 70.9 |
Find 136 sgRNAs with CRISPR-Local
Find 483 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGATCACACGGTATTTA+AGG | 0.142154 | 4_2:-55339934 | Msa0608330:CDS |
| ACGTCAAATTTCGTAATTAA+AGG | 0.144472 | 4_2:+55343153 | None:intergenic |
| TATTTAACCTTGATTTATAT+TGG | 0.192543 | 4_2:-55339044 | Msa0608330:three_prime_UTR |
| GCCTTCTCCAACCATTTAAT+TGG | 0.217072 | 4_2:+55343495 | None:intergenic |
| TTCCAATGTGAATTTGTTTC+CGG | 0.219134 | 4_2:-55339085 | Msa0608330:three_prime_UTR |
| ATGAGGAATATACCGTTTAA+AGG | 0.268852 | 4_2:+55339644 | None:intergenic |
| AGGGTCTTTGTCTTGTTGAC+TGG | 0.285319 | 4_2:-55339983 | Msa0608330:CDS |
| GAGGCTAATGCATCATTTAA+AGG | 0.293893 | 4_2:+55338931 | None:intergenic |
| GGATAGGCCGTGGAAATTTC+AGG | 0.295323 | 4_2:-55339868 | Msa0608330:intron |
| AAGGGAGATTGTAGGACTTC+TGG | 0.299891 | 4_2:-55339915 | Msa0608330:CDS |
| GTTTCTAAAGTGAGCAAATA+AGG | 0.303094 | 4_2:+55338979 | None:intergenic |
| CATGATGTTGGCTTGATTCA+TGG | 0.315489 | 4_2:-55341544 | Msa0608330:CDS |
| CCAGATCACACGGTATTTAA+GGG | 0.329918 | 4_2:-55339933 | Msa0608330:CDS |
| ATTTAACCTTGATTTATATT+GGG | 0.344177 | 4_2:-55339043 | Msa0608330:three_prime_UTR |
| TCCAATGTGAATTTGTTTCC+GGG | 0.350888 | 4_2:-55339084 | Msa0608330:three_prime_UTR |
| GAACCAGATCTTGAGAAATC+TGG | 0.360722 | 4_2:+55345635 | None:intergenic |
| AGGAATAAAGTTATAGAGAT+AGG | 0.362344 | 4_2:-55342977 | Msa0608330:intron |
| TAACGAATAAGCAGATTATC+AGG | 0.372673 | 4_2:+55341511 | None:intergenic |
| GAAATGCAGAGCCAATTAAA+TGG | 0.372734 | 4_2:-55343506 | Msa0608330:CDS |
| GATGCTGCATAATACCTATA+TGG | 0.374786 | 4_2:-55339721 | Msa0608330:CDS |
| AGAAACTCTACTGAGAAATA+AGG | 0.378591 | 4_2:+55343467 | None:intergenic |
| ATACCGTTTAAAGGGTAGTC+TGG | 0.385293 | 4_2:+55339653 | None:intergenic |
| TTCATGTATATCAACGAATT+CGG | 0.385582 | 4_2:-55338777 | Msa0608330:three_prime_UTR |
| ATCTTTCAGAGGTCAAACTA+TGG | 0.389080 | 4_2:-55341820 | Msa0608330:intron |
| TATCAAGGGCTGTGCTGGAC+AGG | 0.396395 | 4_2:-55342139 | Msa0608330:CDS |
| TGCATTCTTCAAAGTGGATA+AGG | 0.400192 | 4_2:+55343003 | None:intergenic |
| GGAATTGAAGAAGTCCTTCC+AGG | 0.400891 | 4_2:-55339345 | Msa0608330:CDS |
| GTCCAGCACAGCCCTTGATA+TGG | 0.404136 | 4_2:+55342142 | None:intergenic |
| TGAGAAATCTGGGATCATTT+CGG | 0.408017 | 4_2:+55345646 | None:intergenic |
| GGGTCTTTGTCTTGTTGACT+GGG | 0.408366 | 4_2:-55339982 | Msa0608330:CDS |
| ATCCCAGATTTCTCAAGATC+TGG | 0.410161 | 4_2:-55345638 | Msa0608330:CDS |
| CCCTTAAATACCGTGTGATC+TGG | 0.410725 | 4_2:+55339933 | None:intergenic |
| TACCATATCAAGGGCTGTGC+TGG | 0.414405 | 4_2:-55342144 | Msa0608330:CDS |
| TGTCTTGTTGACTGGGGAAG+AGG | 0.418172 | 4_2:-55339975 | Msa0608330:CDS |
| AGGAGCATGTGATGGAAAAC+AGG | 0.418942 | 4_2:+55339126 | None:intergenic |
| AAGGATTTATCTTCTTCAAA+AGG | 0.419099 | 4_2:+55343172 | None:intergenic |
| TTCCCAGACTACCCTTTAAA+CGG | 0.426277 | 4_2:-55339656 | Msa0608330:intron |
| ACTACCCTGGCCATGATGAT+AGG | 0.432249 | 4_2:-55339379 | Msa0608330:CDS |
| CTTTAACCCAATATAAATCA+AGG | 0.436169 | 4_2:+55339037 | None:intergenic |
| GTCTGTAATTATTTAGCTCA+TGG | 0.445369 | 4_2:-55341754 | Msa0608330:CDS |
| AAGAGTCTTGTCCGTGACTA+AGG | 0.448895 | 4_2:+55339106 | None:intergenic |
| AAGCGGTTGTTGGCATGATC+AGG | 0.450027 | 4_2:-55340082 | Msa0608330:intron |
| TGAGGAATATACCGTTTAAA+GGG | 0.455127 | 4_2:+55339645 | None:intergenic |
| ATCAACTCATATGTGGTCAT+AGG | 0.457303 | 4_2:-55341634 | Msa0608330:CDS |
| TGTGGTCATAGGAAAATTCA+TGG | 0.457949 | 4_2:-55341623 | Msa0608330:CDS |
| TGGAATTAAGTACCATATCA+AGG | 0.458109 | 4_2:-55342154 | Msa0608330:CDS |
| TGATGATAGGAAGTTGTTGC+AGG | 0.460062 | 4_2:-55339366 | Msa0608330:CDS |
| ATGCAGTTTGAGTAACCATC+TGG | 0.463571 | 4_2:-55338878 | Msa0608330:three_prime_UTR |
| GCAGATGCATATGGCCTTTG+TGG | 0.464247 | 4_2:-55339756 | Msa0608330:CDS |
| AACTTCCTATCATCATGGCC+AGG | 0.468707 | 4_2:+55339374 | None:intergenic |
| TTATAAAGAATCTGCTACGT+TGG | 0.469635 | 4_2:-55343238 | Msa0608330:CDS |
| AGGGGTAACCTCACAGAAGA+TGG | 0.471394 | 4_2:-55340117 | Msa0608330:CDS |
| GTCTTGTTGACTGGGGAAGA+GGG | 0.473313 | 4_2:-55339974 | Msa0608330:CDS |
| GGAAATGCCGAGCTTATAGA+TGG | 0.474826 | 4_2:+55344732 | None:intergenic |
| TCGAGCACTAAATCTTATAC+AGG | 0.477530 | 4_2:-55343034 | Msa0608330:CDS |
| TGTCAACAGGCAGATGCATA+TGG | 0.477835 | 4_2:-55339765 | Msa0608330:intron |
| TGCATGTTTCTTTGAAGCAA+AGG | 0.478269 | 4_2:-55344776 | Msa0608330:CDS |
| TTCAATGGCGGTTGTGAAAG+TGG | 0.479395 | 4_2:+55345891 | None:intergenic |
| CACATAAAGTGAAGCATCGT+TGG | 0.479405 | 4_2:+55344804 | None:intergenic |
| AACCAGATCTTGAGAAATCT+GGG | 0.480271 | 4_2:+55345636 | None:intergenic |
| TCTTAGACCGAAGCGGTTGT+TGG | 0.486235 | 4_2:-55340092 | Msa0608330:CDS |
| AGAGAGTAGAACCGGAGAAA+AGG | 0.486707 | 4_2:+55345856 | None:intergenic |
| ATTGAAACTTTGCATGATGT+TGG | 0.493369 | 4_2:-55341556 | Msa0608330:CDS |
| CGGTATTTAAGGGAGATTGT+AGG | 0.498060 | 4_2:-55339923 | Msa0608330:CDS |
| GCATGTTTCTTTGAAGCAAA+GGG | 0.502422 | 4_2:-55344775 | Msa0608330:CDS |
| TTGAGTTTCTTTATACGTTG+AGG | 0.503378 | 4_2:+55339305 | None:intergenic |
| GATCATGCCAACAACCGCTT+CGG | 0.504689 | 4_2:+55340085 | None:intergenic |
| TGCAGAGCCAATTAAATGGT+TGG | 0.506536 | 4_2:-55343502 | Msa0608330:CDS |
| TAAAACTCCCAAGGGAAAGC+TGG | 0.507197 | 4_2:+55341956 | None:intergenic |
| TACTCAAACTGCATAATACA+AGG | 0.512916 | 4_2:+55338887 | None:intergenic |
| AGGAGTTACTCGCGAAGCAA+AGG | 0.517311 | 4_2:-55339283 | Msa0608330:CDS |
| TTTAGTGCCACAACATCATC+AGG | 0.517504 | 4_2:+55342075 | None:intergenic |
| AAAATAATGACATTAATCCA+TGG | 0.520606 | 4_2:-55343215 | Msa0608330:CDS |
| CCTTGATGCATTCTTCAAAG+TGG | 0.528643 | 4_2:+55342997 | None:intergenic |
| GGAGTTACTCGCGAAGCAAA+GGG | 0.529180 | 4_2:-55339282 | Msa0608330:CDS |
| TTTAGCTCATGGGACACTAC+AGG | 0.533494 | 4_2:-55341743 | Msa0608330:intron |
| GCATTGAGATGCAGGAGGAT+AGG | 0.536057 | 4_2:-55339884 | Msa0608330:CDS |
| CTAACAATTAGCATCTATAG+AGG | 0.536777 | 4_2:+55338912 | None:intergenic |
| GTTACTGGAACGTCGAGCTA+TGG | 0.540651 | 4_2:-55339430 | Msa0608330:CDS |
| ACACTTGCATGTGCGCGTCC+CGG | 0.540995 | 4_2:+55339066 | None:intergenic |
| ATCTGGGATCATTTCGGTAG+CGG | 0.541954 | 4_2:+55345652 | None:intergenic |
| ACTGAAACTCAACAACTCAA+TGG | 0.543207 | 4_2:-55345938 | Msa0608330:exon |
| TACCGTTTAAAGGGTAGTCT+GGG | 0.543989 | 4_2:+55339654 | None:intergenic |
| TCTGTAATTATTTAGCTCAT+GGG | 0.545403 | 4_2:-55341753 | Msa0608330:CDS |
| GCCAATTAAATGGTTGGAGA+AGG | 0.547669 | 4_2:-55343496 | Msa0608330:CDS |
| AAATAATGACATTAATCCAT+GGG | 0.548303 | 4_2:-55343214 | Msa0608330:CDS |
| TGATGATGTTGTGGCACTAA+AGG | 0.548983 | 4_2:-55342073 | Msa0608330:intron |
| CCACTTTGAAGAATGCATCA+AGG | 0.554945 | 4_2:-55342997 | Msa0608330:CDS |
| GATCAGAGCTGATATAGTCC+TGG | 0.561424 | 4_2:+55339327 | None:intergenic |
| GCAACAACTTCCTATCATCA+TGG | 0.569220 | 4_2:+55339369 | None:intergenic |
| AACCGGAGAAAAGGTAAGAG+AGG | 0.573170 | 4_2:+55345865 | None:intergenic |
| TTGTGAAAGTGGAGGAGTTG+CGG | 0.575183 | 4_2:+55345902 | None:intergenic |
| ATAGACAGCTACAGCAGAAG+TGG | 0.575570 | 4_2:+55339218 | None:intergenic |
| CAATACTATAAAGTGAAGCA+AGG | 0.576715 | 4_2:-55339010 | Msa0608330:three_prime_UTR |
| ATCAAGGGCTGTGCTGGACA+GGG | 0.576821 | 4_2:-55342138 | Msa0608330:CDS |
| AGGTAAGAGAGGGTCTTCAA+TGG | 0.579097 | 4_2:+55345876 | None:intergenic |
| GGAGGAGTTGCGGAGGAGCG+TGG | 0.581009 | 4_2:+55345912 | None:intergenic |
| CAAGGTTGCTTCAAGCCAGA+AGG | 0.585263 | 4_2:-55343436 | Msa0608330:intron |
| AGTATGATTGTTTCACTCGA+AGG | 0.585602 | 4_2:-55338804 | Msa0608330:three_prime_UTR |
| CGATACATGTAAAACTCCCA+AGG | 0.587726 | 4_2:+55341947 | None:intergenic |
| GCTGACACCATCTATAAGCT+CGG | 0.589888 | 4_2:-55344739 | Msa0608330:CDS |
| ACCGGAGAAAAGGTAAGAGA+GGG | 0.590276 | 4_2:+55345866 | None:intergenic |
| CAAAAGGTCATTCAGAGTAG+AGG | 0.591431 | 4_2:+55343188 | None:intergenic |
| GGAATTAAGTACCATATCAA+GGG | 0.593763 | 4_2:-55342153 | Msa0608330:CDS |
| TAGAGTTTCTGAAATATGCA+AGG | 0.593936 | 4_2:-55343454 | Msa0608330:CDS |
| CGTGACTAAGGAGCATGTGA+TGG | 0.596999 | 4_2:+55339118 | None:intergenic |
| TTCAGAGTAGAGGCATCCCA+TGG | 0.598106 | 4_2:+55343198 | None:intergenic |
| AGATGCAGGAGGATAGGCCG+TGG | 0.601296 | 4_2:-55339878 | Msa0608330:CDS |
| TATAAGATTTAGTGCTCGAA+CGG | 0.602170 | 4_2:+55343038 | None:intergenic |
| ATCTGCTTATTCGTTATGCT+AGG | 0.602539 | 4_2:-55341504 | Msa0608330:intron |
| GGATGTCATCAACTCATATG+TGG | 0.602720 | 4_2:-55341641 | Msa0608330:CDS |
| TCAACGTATAAAGAAACTCA+AGG | 0.607844 | 4_2:-55339303 | Msa0608330:CDS |
| AATACTATAAAGTGAAGCAA+GGG | 0.607975 | 4_2:-55339009 | Msa0608330:three_prime_UTR |
| GGGGTAACCTCACAGAAGAT+GGG | 0.608152 | 4_2:-55340116 | Msa0608330:CDS |
| AGAGCTGATATAGTCCTGGA+AGG | 0.609239 | 4_2:+55339331 | None:intergenic |
| CAGTGATCCTGATGATGTTG+TGG | 0.611453 | 4_2:-55342082 | Msa0608330:CDS |
| TAAAACACTATGCAGAACAC+AGG | 0.612738 | 4_2:+55339255 | None:intergenic |
| CATCACATGCTCCTTAGTCA+CGG | 0.618109 | 4_2:-55339117 | Msa0608330:three_prime_UTR |
| ACTTCCTATCATCATGGCCA+GGG | 0.620638 | 4_2:+55339375 | None:intergenic |
| TCCCGGAAACAAATTCACAT+TGG | 0.621279 | 4_2:+55339083 | None:intergenic |
| GGACTCACCTGAAATTTCCA+CGG | 0.621709 | 4_2:+55339861 | None:intergenic |
| GGTCTTTGTCTTGTTGACTG+GGG | 0.624325 | 4_2:-55339981 | Msa0608330:CDS |
| TAATCTCTTTCCAGATCACA+CGG | 0.648178 | 4_2:-55339943 | Msa0608330:CDS |
| GGAGTTGCGGAGGAGCGTGG+TGG | 0.656592 | 4_2:+55345915 | None:intergenic |
| GATACATGTAAAACTCCCAA+GGG | 0.657048 | 4_2:+55341948 | None:intergenic |
| AAAACACTATGCAGAACACA+GGG | 0.659269 | 4_2:+55339256 | None:intergenic |
| TGAAAGTGGAGGAGTTGCGG+AGG | 0.670359 | 4_2:+55345905 | None:intergenic |
| AAGGGCTGTGCTGGACAGGG+AGG | 0.672386 | 4_2:-55342135 | Msa0608330:CDS |
| GATGGGTTCTTAGACCGAAG+CGG | 0.673200 | 4_2:-55340099 | Msa0608330:CDS |
| TCGATGCATTGAGATGCAGG+AGG | 0.674555 | 4_2:-55339889 | Msa0608330:CDS |
| TAAGAGAGGGTCTTCAATGG+CGG | 0.686561 | 4_2:+55345879 | None:intergenic |
| ACTCAAACTGCATAATACAA+GGG | 0.690723 | 4_2:+55338888 | None:intergenic |
| AAGATGCTTAATGACTACCC+TGG | 0.701217 | 4_2:-55339392 | Msa0608330:CDS |
| AATGGCGGTTGTGAAAGTGG+AGG | 0.702578 | 4_2:+55345894 | None:intergenic |
| CTAAGAACCCATCTTCTGTG+AGG | 0.704393 | 4_2:+55340109 | None:intergenic |
| TCGTATGAACAACACCACAA+AGG | 0.707070 | 4_2:+55339742 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTTAAATGATAATTTTA+TGG | - | chr4_2:55340583-55340602 | Msa0608330:intron | 10.0% |
| !! | AATAAAATAATACTTCATTT+AGG | - | chr4_2:55340978-55340997 | Msa0608330:intron | 10.0% |
| !!! | ACTATATTATTTTGTTTTTA+AGG | - | chr4_2:55343463-55343482 | Msa0608330:CDS | 10.0% |
| !!! | TAATTTTTATTCTGATAATT+TGG | - | chr4_2:55345244-55345263 | Msa0608330:intron | 10.0% |
| !!! | GATATTTTTAGAGATATTTT+CGG | + | chr4_2:55339460-55339479 | None:intergenic | 15.0% |
| !!! | TTTCTTAATTTGTGTATAAT+TGG | - | chr4_2:55339661-55339680 | Msa0608330:CDS | 15.0% |
| !!! | ATTTTCAAAGTTATTTGAAA+TGG | - | chr4_2:55340208-55340227 | Msa0608330:intron | 15.0% |
| !!! | TTTTCAAAGTTATTTGAAAT+GGG | - | chr4_2:55340209-55340228 | Msa0608330:intron | 15.0% |
| !! | TATAAACTTGTATACTTATT+AGG | - | chr4_2:55340461-55340480 | Msa0608330:intron | 15.0% |
| !!! | TAAATACAATTATTTTGAGA+TGG | - | chr4_2:55341024-55341043 | Msa0608330:intron | 15.0% |
| !!! | ATGGTAAATATATTTGTTAT+AGG | - | chr4_2:55341043-55341062 | Msa0608330:intron | 15.0% |
| !!! | TGGTAAATATATTTGTTATA+GGG | - | chr4_2:55341044-55341063 | Msa0608330:intron | 15.0% |
| !! | TAAAGAATAGTGATATATAA+AGG | + | chr4_2:55341354-55341373 | None:intergenic | 15.0% |
| !! | TTATATATCACTATTCTTTA+TGG | - | chr4_2:55341354-55341373 | Msa0608330:intron | 15.0% |
| !!! | CTTATGTAACTTATAATTTT+AGG | - | chr4_2:55341447-55341466 | Msa0608330:intron | 15.0% |
| !! | ATTCAAGACATTAAAAAAAA+GGG | + | chr4_2:55342249-55342268 | None:intergenic | 15.0% |
| !! | AATTCAAGACATTAAAAAAA+AGG | + | chr4_2:55342250-55342269 | None:intergenic | 15.0% |
| !!! | ATGTTATATTTCTATGTATA+GGG | + | chr4_2:55342692-55342711 | None:intergenic | 15.0% |
| !!! | TATGTTATATTTCTATGTAT+AGG | + | chr4_2:55342693-55342712 | None:intergenic | 15.0% |
| !!! | ATAATATGTTTTATCTTTCA+TGG | - | chr4_2:55343834-55343853 | Msa0608330:intron | 15.0% |
| !! | ATTAAAAGATAAATGATTTG+TGG | - | chr4_2:55344154-55344173 | Msa0608330:intron | 15.0% |
| !!! | ATACATTTTTTTTATCTTTC+AGG | - | chr4_2:55344709-55344728 | Msa0608330:intron | 15.0% |
| !!! | TACATTTTTTTTATCTTTCA+GGG | - | chr4_2:55344710-55344729 | Msa0608330:intron | 15.0% |
| !! | AAATTAAAGTTGAAAACAAA+AGG | + | chr4_2:55345230-55345249 | None:intergenic | 15.0% |
| !! | TATTTAACCTTGATTTATAT+TGG | - | chr4_2:55345668-55345687 | Msa0608330:CDS | 15.0% |
| !! | ATTTAACCTTGATTTATATT+GGG | - | chr4_2:55345669-55345688 | Msa0608330:CDS | 15.0% |
| !! | GAAATGATAATTGAAACTTT+CGG | + | chr4_2:55339134-55339153 | None:intergenic | 20.0% |
| !!! | TGATGCTATTTTTTTTAGTT+TGG | - | chr4_2:55339432-55339451 | Msa0608330:CDS | 20.0% |
| !! | AAACTACTATATTGTTTGAA+CGG | - | chr4_2:55339730-55339749 | Msa0608330:CDS | 20.0% |
| !!! | TATTATTTCTAGATCTTGAA+TGG | - | chr4_2:55340395-55340414 | Msa0608330:intron | 20.0% |
| !!! | ATTATTTCTAGATCTTGAAT+GGG | - | chr4_2:55340396-55340415 | Msa0608330:intron | 20.0% |
| !! | ATTTGATTAAAAGAATGTAC+TGG | + | chr4_2:55340688-55340707 | None:intergenic | 20.0% |
| !!! | TTATCAACATTATAATTTGC+AGG | + | chr4_2:55340910-55340929 | None:intergenic | 20.0% |
| !!! | TGTAGTTCTAATTTTATGTT+TGG | - | chr4_2:55341170-55341189 | Msa0608330:intron | 20.0% |
| !! | AAAATAATGACATTAATCCA+TGG | - | chr4_2:55341497-55341516 | Msa0608330:intron | 20.0% |
| !! | AAATAATGACATTAATCCAT+GGG | - | chr4_2:55341498-55341517 | Msa0608330:intron | 20.0% |
| !! | ATGTATTTAAAGACATGTAA+GGG | + | chr4_2:55341644-55341663 | None:intergenic | 20.0% |
| !! | AATGTATTTAAAGACATGTA+AGG | + | chr4_2:55341645-55341664 | None:intergenic | 20.0% |
| !! | ATGTCTTTAAATACATTTCA+GGG | - | chr4_2:55341648-55341667 | Msa0608330:intron | 20.0% |
| !! | ATTCATATAAAATTCACTCT+AGG | + | chr4_2:55341859-55341878 | None:intergenic | 20.0% |
| !! | ACTCAAGACATTAAAAAAAA+GGG | + | chr4_2:55342005-55342024 | None:intergenic | 20.0% |
| !! | ACTCAAGACATTAAAAAAAA+GGG | + | chr4_2:55342005-55342024 | None:intergenic | 20.0% |
| !! | CAATTATGTAGTTATCTTAT+TGG | - | chr4_2:55342274-55342293 | Msa0608330:intron | 20.0% |
| !!! | GATTAACTTTAAAAGATGAA+AGG | + | chr4_2:55342418-55342437 | None:intergenic | 20.0% |
| !!! | TGTTATATTTCTATGTATAG+GGG | + | chr4_2:55342691-55342710 | None:intergenic | 20.0% |
| !!! | ATTTTGATTTTACAAAACTG+AGG | + | chr4_2:55343281-55343300 | None:intergenic | 20.0% |
| !! | AGTAACAGTACAAAAATAAT+GGG | + | chr4_2:55343446-55343465 | None:intergenic | 20.0% |
| !! | TAGTAACAGTACAAAAATAA+TGG | + | chr4_2:55343447-55343466 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTTTTAAGGATG+TGG | - | chr4_2:55343469-55343488 | Msa0608330:CDS | 20.0% |
| !!! | TATTTTGTTTTTAAGGATGT+GGG | - | chr4_2:55343470-55343489 | Msa0608330:CDS | 20.0% |
| !! | ACTATGCTAAAAATTCAAAT+TGG | + | chr4_2:55343909-55343928 | None:intergenic | 20.0% |
| !!! | CAAAAATGTTAATCTTTTAC+TGG | - | chr4_2:55344315-55344334 | Msa0608330:intron | 20.0% |
| !! | TTTGTAGTGTAATTTAAGTA+GGG | + | chr4_2:55344875-55344894 | None:intergenic | 20.0% |
| !! | ATTTGTAGTGTAATTTAAGT+AGG | + | chr4_2:55344876-55344895 | None:intergenic | 20.0% |
| !!! | ATCAGATGATTCTTTTTTAA+CGG | + | chr4_2:55345020-55345039 | None:intergenic | 20.0% |
| !! | TTAAAAAAGAATCATCTGAT+GGG | - | chr4_2:55345020-55345039 | Msa0608330:intron | 20.0% |
| ! | ATTCACAAAATGCAGAAAAT+TGG | + | chr4_2:55338936-55338955 | None:intergenic | 25.0% |
| ! | AGAGTTGAAATATTACATAG+AGG | + | chr4_2:55339102-55339121 | None:intergenic | 25.0% |
| !!! | ACATCACTCCATTTTTTTTA+GGG | - | chr4_2:55339200-55339219 | Msa0608330:three_prime_UTR | 25.0% |
| ! | TCTAACTACCCTAAAAAAAA+TGG | + | chr4_2:55339211-55339230 | None:intergenic | 25.0% |
| !!! | TCTATATGTCATGTTTTGAT+TGG | - | chr4_2:55339484-55339503 | Msa0608330:intron | 25.0% |
| ! | TAATACTAAGAGAGACATAT+AGG | - | chr4_2:55339571-55339590 | Msa0608330:intron | 25.0% |
| ! | AAAGAGACAAAAGATTTAGA+AGG | - | chr4_2:55339605-55339624 | Msa0608330:intron | 25.0% |
| !!! | TGTTACTCTTCCATTTTTAT+GGG | + | chr4_2:55339687-55339706 | None:intergenic | 25.0% |
| !!! | TTGTTACTCTTCCATTTTTA+TGG | + | chr4_2:55339688-55339707 | None:intergenic | 25.0% |
| !!! | TTTGCTTTTGATATTGCAAA+TGG | - | chr4_2:55340032-55340051 | Msa0608330:intron | 25.0% |
| !!! | CATAATGATTTGTTAGGAAA+AGG | - | chr4_2:55340058-55340077 | Msa0608330:intron | 25.0% |
| ! | CAATTATAGGAAACTGTATT+TGG | + | chr4_2:55340103-55340122 | None:intergenic | 25.0% |
| ! | ACTAAAACCATAGCAATTAT+AGG | + | chr4_2:55340116-55340135 | None:intergenic | 25.0% |
| ! | ATCTGGGAAACTAATAAATT+TGG | + | chr4_2:55340719-55340738 | None:intergenic | 25.0% |
| ! | TTTCAAAGAATTGCTAATGT+TGG | + | chr4_2:55340823-55340842 | None:intergenic | 25.0% |
| ! | AAGATTGAAGAATAACAAAC+TGG | - | chr4_2:55340939-55340958 | Msa0608330:intron | 25.0% |
| ! | AGATTGAAGAATAACAAACT+GGG | - | chr4_2:55340940-55340959 | Msa0608330:intron | 25.0% |
| ! | TATAAAACACCACGAAAAAA+TGG | + | chr4_2:55341104-55341123 | None:intergenic | 25.0% |
| !!! | TCTGTTTTATTCTGATTTGT+TGG | - | chr4_2:55341124-55341143 | Msa0608330:intron | 25.0% |
| !!! | TTGGCTCAATTTTTAACTAT+GGG | + | chr4_2:55341331-55341350 | None:intergenic | 25.0% |
| ! | GAATAGTGATATATAAAGGT+TGG | + | chr4_2:55341350-55341369 | None:intergenic | 25.0% |
| ! | CTAAAAATTGAACTGAAACA+GGG | + | chr4_2:55341402-55341421 | None:intergenic | 25.0% |
| ! | TCTAAAAATTGAACTGAAAC+AGG | + | chr4_2:55341403-55341422 | None:intergenic | 25.0% |
| ! | AAGGATTTATCTTCTTCAAA+AGG | + | chr4_2:55341543-55341562 | None:intergenic | 25.0% |
| ! | ACGTCAAATTTCGTAATTAA+AGG | + | chr4_2:55341562-55341581 | None:intergenic | 25.0% |
| ! | TAAGTTTAAGCATGTAACAA+AGG | + | chr4_2:55341598-55341617 | None:intergenic | 25.0% |
| ! | CATGTCTTTAAATACATTTC+AGG | - | chr4_2:55341647-55341666 | Msa0608330:intron | 25.0% |
| ! | TGTCTTTAAATACATTTCAG+GGG | - | chr4_2:55341649-55341668 | Msa0608330:intron | 25.0% |
| ! | AGGAATAAAGTTATAGAGAT+AGG | - | chr4_2:55341735-55341754 | Msa0608330:intron | 25.0% |
| ! | CACTCAAGACATTAAAAAAA+AGG | + | chr4_2:55342006-55342025 | None:intergenic | 25.0% |
| ! | CACTCAAGACATTAAAAAAA+AGG | + | chr4_2:55342006-55342025 | None:intergenic | 25.0% |
| ! | AAGATGAAAGGAAAAAACAA+GGG | + | chr4_2:55342406-55342425 | None:intergenic | 25.0% |
| ! | AAAGATGAAAGGAAAAAACA+AGG | + | chr4_2:55342407-55342426 | None:intergenic | 25.0% |
| !! | GTTATATTTCTATGTATAGG+GGG | + | chr4_2:55342690-55342709 | None:intergenic | 25.0% |
| !! | TCTGTAATTATTTAGCTCAT+GGG | - | chr4_2:55342959-55342978 | Msa0608330:intron | 25.0% |
| ! | ATATGCCTCTTAAAAAAGTA+GGG | - | chr4_2:55343410-55343429 | Msa0608330:intron | 25.0% |
| !!! | AATATCCCTACTTTTTTAAG+AGG | + | chr4_2:55343418-55343437 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTTAAGGATGTG+GGG | - | chr4_2:55343471-55343490 | Msa0608330:CDS | 25.0% |
| !!! | GTAAAGTATCATCCTTATTT+TGG | - | chr4_2:55343517-55343536 | Msa0608330:intron | 25.0% |
| ! | TGAACATATCTTGATGTATT+TGG | + | chr4_2:55343597-55343616 | None:intergenic | 25.0% |
| ! | TAAGAAGACATGCATAAAAA+AGG | - | chr4_2:55343631-55343650 | Msa0608330:intron | 25.0% |
| ! | TTATGATAGTTGTATCATTC+AGG | - | chr4_2:55343861-55343880 | Msa0608330:intron | 25.0% |
| ! | TATGATAGTTGTATCATTCA+GGG | - | chr4_2:55343862-55343881 | Msa0608330:intron | 25.0% |
| !!! | TTGAATTTTTAGCATAGTCA+TGG | - | chr4_2:55343911-55343930 | Msa0608330:intron | 25.0% |
| ! | AAATAATCAACGTAAGAAGT+TGG | + | chr4_2:55344005-55344024 | None:intergenic | 25.0% |
| ! | TTCATCTAAATTCAGTTGTA+TGG | - | chr4_2:55344032-55344051 | Msa0608330:intron | 25.0% |
| !!! | ATTGTTTCTCGTTATTTTGA+AGG | - | chr4_2:55344575-55344594 | Msa0608330:intron | 25.0% |
| !!! | TTGTTTCTCGTTATTTTGAA+GGG | - | chr4_2:55344576-55344595 | Msa0608330:intron | 25.0% |
| !!! | TTTTTTAACGGTTTCCATAT+AGG | + | chr4_2:55345008-55345027 | None:intergenic | 25.0% |
| ! | GTTAAAAAAGAATCATCTGA+TGG | - | chr4_2:55345019-55345038 | Msa0608330:intron | 25.0% |
| ! | TAAAAAAGAATCATCTGATG+GGG | - | chr4_2:55345021-55345040 | Msa0608330:intron | 25.0% |
| ! | TTGGATGTAACTATAAAATG+AGG | + | chr4_2:55345088-55345107 | None:intergenic | 25.0% |
| !!! | CCAAATTGATTTTACCAAAT+AGG | + | chr4_2:55345181-55345200 | None:intergenic | 25.0% |
| ! | CCTATTTGGTAAAATCAATT+TGG | - | chr4_2:55345178-55345197 | Msa0608330:intron | 25.0% |
| ! | TAAAATCAATTTGGAAGCTA+TGG | - | chr4_2:55345187-55345206 | Msa0608330:intron | 25.0% |
| ! | AAAGTTGAAAACAAAAGGAA+GGG | + | chr4_2:55345225-55345244 | None:intergenic | 25.0% |
| ! | TAAAGTTGAAAACAAAAGGA+AGG | + | chr4_2:55345226-55345245 | None:intergenic | 25.0% |
| ! | CTTTAACCCAATATAAATCA+AGG | + | chr4_2:55345678-55345697 | None:intergenic | 25.0% |
| ! | AATACTATAAAGTGAAGCAA+GGG | - | chr4_2:55345703-55345722 | Msa0608330:CDS | 25.0% |
| ! | TTCATGTATATCAACGAATT+CGG | - | chr4_2:55345935-55345954 | Msa0608330:exon | 25.0% |
| ! | TGCATTTTGTGAATGAATTC+AGG | - | chr4_2:55338942-55338961 | Msa0608330:three_prime_UTR | 30.0% |
| CTAAAAAAAATGGAGTGATG+TGG | + | chr4_2:55339201-55339220 | None:intergenic | 30.0% | |
| !!! | CACATCACTCCATTTTTTTT+AGG | - | chr4_2:55339199-55339218 | Msa0608330:three_prime_UTR | 30.0% |
| GATTAATTTCTATGCACTGA+CGG | + | chr4_2:55339534-55339553 | None:intergenic | 30.0% | |
| GTATAATTGGCCCATAAAAA+TGG | - | chr4_2:55339674-55339693 | Msa0608330:CDS | 30.0% | |
| AAATTGAAAGGTTCTCAACT+TGG | - | chr4_2:55339802-55339821 | Msa0608330:intron | 30.0% | |
| !! | TATTGGTTTCTTTATGCAGA+TGG | - | chr4_2:55339828-55339847 | Msa0608330:intron | 30.0% |
| TGTTATCCAAAACACTAACT+TGG | + | chr4_2:55340004-55340023 | None:intergenic | 30.0% | |
| !! | TGGTAGCATAATGATTTGTT+AGG | - | chr4_2:55340052-55340071 | Msa0608330:intron | 30.0% |
| ACAGTTTCCTATAATTGCTA+TGG | - | chr4_2:55340106-55340125 | Msa0608330:CDS | 30.0% | |
| AATTAGCATCTATCAGTTTG+TGG | - | chr4_2:55340241-55340260 | Msa0608330:intron | 30.0% | |
| GAGTGAATCTTTAAACAAAG+TGG | - | chr4_2:55340335-55340354 | Msa0608330:intron | 30.0% | |
| GAATAGTGAATGTTTCTTGT+TGG | - | chr4_2:55340364-55340383 | Msa0608330:intron | 30.0% | |
| GGTACATTTGTCAGAATATT+TGG | - | chr4_2:55340604-55340623 | Msa0608330:intron | 30.0% | |
| !! | AATGTACTGGTTCAATTGAT+GGG | + | chr4_2:55340675-55340694 | None:intergenic | 30.0% |
| GTAATGAAGTAGATGTATCT+GGG | + | chr4_2:55340735-55340754 | None:intergenic | 30.0% | |
| CATAAATTCCTAAAGAGTCT+TGG | + | chr4_2:55340780-55340799 | None:intergenic | 30.0% | |
| ! | TTGGTTAATTCTGAAAGTGT+GGG | + | chr4_2:55340857-55340876 | None:intergenic | 30.0% |
| ! | TTTGGTTAATTCTGAAAGTG+TGG | + | chr4_2:55340858-55340877 | None:intergenic | 30.0% |
| ACTTTCTTGACATAAAGCTT+TGG | + | chr4_2:55340876-55340895 | None:intergenic | 30.0% | |
| !! | ATTATTTTATTCACAGCCGA+AGG | + | chr4_2:55340969-55340988 | None:intergenic | 30.0% |
| AGAAACTCTACTGAGAAATA+AGG | + | chr4_2:55341248-55341267 | None:intergenic | 30.0% | |
| !! | TAGAGTTTCTGAAATATGCA+AGG | - | chr4_2:55341258-55341277 | Msa0608330:intron | 30.0% |
| CAATATGATTTCATACCTTC+TGG | + | chr4_2:55341294-55341313 | None:intergenic | 30.0% | |
| !! | GTTGGCTCAATTTTTAACTA+TGG | + | chr4_2:55341332-55341351 | None:intergenic | 30.0% |
| TTATAAAGAATCTGCTACGT+TGG | - | chr4_2:55341474-55341493 | Msa0608330:intron | 30.0% | |
| TATAAGATTTAGTGCTCGAA+CGG | + | chr4_2:55341677-55341696 | None:intergenic | 30.0% | |
| GATCATACATACACAGAAAA+TGG | + | chr4_2:55341830-55341849 | None:intergenic | 30.0% | |
| !! | ATACCATTTTGTTATGAGAC+CGG | - | chr4_2:55341903-55341922 | Msa0608330:intron | 30.0% |
| TACAATACACCAAAAATGGT+GGG | - | chr4_2:55341931-55341950 | Msa0608330:CDS | 30.0% | |
| TGTCTTGAGTGTAAAAAAAC+AGG | - | chr4_2:55342015-55342034 | Msa0608330:intron | 30.0% | |
| GTCTTGAGTGTAAAAAAACA+GGG | - | chr4_2:55342016-55342035 | Msa0608330:intron | 30.0% | |
| GTAAAAAAACAGGGTAAGTA+AGG | - | chr4_2:55342025-55342044 | Msa0608330:intron | 30.0% | |
| TGTCTTGAGTGTAAAAAAAC+AGG | - | chr4_2:55342015-55342034 | Msa0608330:intron | 30.0% | |
| GTCTTGAGTGTAAAAAAACA+GGG | - | chr4_2:55342016-55342035 | Msa0608330:intron | 30.0% | |
| GTAAAAAAACAGGGTAAGTA+AGG | - | chr4_2:55342025-55342044 | Msa0608330:intron | 30.0% | |
| TACAATACACCAAAAATGGT+GGG | - | chr4_2:55341931-55341950 | Msa0608330:CDS | 30.0% | |
| AACAAGAGCAATTGTTTAAC+TGG | + | chr4_2:55342514-55342533 | None:intergenic | 30.0% | |
| TGGAATTAAGTACCATATCA+AGG | - | chr4_2:55342558-55342577 | Msa0608330:intron | 30.0% | |
| GGAATTAAGTACCATATCAA+GGG | - | chr4_2:55342559-55342578 | Msa0608330:intron | 30.0% | |
| !!! | TCAGATTGCATTTTGAAACT+TGG | - | chr4_2:55342721-55342740 | Msa0608330:intron | 30.0% |
| ! | GTCTGTAATTATTTAGCTCA+TGG | - | chr4_2:55342958-55342977 | Msa0608330:intron | 30.0% |
| AGATAATGAGGGAAATCAAA+AGG | + | chr4_2:55343005-55343024 | None:intergenic | 30.0% | |
| TTCAACAGAAAATTCTATGC+AGG | - | chr4_2:55343050-55343069 | Msa0608330:intron | 30.0% | |
| ATTGAAACTTTGCATGATGT+TGG | - | chr4_2:55343156-55343175 | Msa0608330:CDS | 30.0% | |
| TAACGAATAAGCAGATTATC+AGG | + | chr4_2:55343204-55343223 | None:intergenic | 30.0% | |
| AGACAAATTATCGAGGTAAA+AGG | + | chr4_2:55343326-55343345 | None:intergenic | 30.0% | |
| TGAAAAGAGACAAATTATCG+AGG | + | chr4_2:55343333-55343352 | None:intergenic | 30.0% | |
| ATATCCTCAAAACTAAGATG+GGG | + | chr4_2:55343394-55343413 | None:intergenic | 30.0% | |
| CATATCCTCAAAACTAAGAT+GGG | + | chr4_2:55343395-55343414 | None:intergenic | 30.0% | |
| GATATGCCTCTTAAAAAAGT+AGG | - | chr4_2:55343409-55343428 | Msa0608330:intron | 30.0% | |
| !!! | GTATCATCCTTATTTTGGAT+AGG | - | chr4_2:55343522-55343541 | Msa0608330:intron | 30.0% |
| TAGTTGTCCTATCCAAAATA+AGG | + | chr4_2:55343532-55343551 | None:intergenic | 30.0% | |
| TATCTTGATGTATTTGGACA+GGG | + | chr4_2:55343591-55343610 | None:intergenic | 30.0% | |
| ATATCTTGATGTATTTGGAC+AGG | + | chr4_2:55343592-55343611 | None:intergenic | 30.0% | |
| ATGGTTTACTCTCTTACATT+TGG | - | chr4_2:55343973-55343992 | Msa0608330:intron | 30.0% | |
| CTAAATTCAGTTGTATGGAA+TGG | - | chr4_2:55344037-55344056 | Msa0608330:intron | 30.0% | |
| AAGTTAAAGTATGGTGGTAT+AGG | - | chr4_2:55344343-55344362 | Msa0608330:intron | 30.0% | |
| !!! | TGTTTCTCGTTATTTTGAAG+GGG | - | chr4_2:55344577-55344596 | Msa0608330:intron | 30.0% |
| TAACAGAAGAGCAACTTTAA+AGG | + | chr4_2:55344922-55344941 | None:intergenic | 30.0% | |
| AAAAAAGAATCATCTGATGG+GGG | - | chr4_2:55345022-55345041 | Msa0608330:intron | 30.0% | |
| TGAGGAATATACCGTTTAAA+GGG | + | chr4_2:55345070-55345089 | None:intergenic | 30.0% | |
| ATGAGGAATATACCGTTTAA+AGG | + | chr4_2:55345071-55345090 | None:intergenic | 30.0% | |
| TAGAGTACAAAAGTAGCAAT+TGG | + | chr4_2:55345107-55345126 | None:intergenic | 30.0% | |
| ! | CTTTTGTACTCTATGATTAG+AGG | - | chr4_2:55345114-55345133 | Msa0608330:intron | 30.0% |
| ! | GATTTTACCAAATAGGTAGA+GGG | + | chr4_2:55345174-55345193 | None:intergenic | 30.0% |
| ! | TGATTTTACCAAATAGGTAG+AGG | + | chr4_2:55345175-55345194 | None:intergenic | 30.0% |
| TTGTTGTATCAAACAGTTAC+TGG | - | chr4_2:55345267-55345286 | Msa0608330:intron | 30.0% | |
| TTGAGTTTCTTTATACGTTG+AGG | + | chr4_2:55345410-55345429 | None:intergenic | 30.0% | |
| TCAACGTATAAAGAAACTCA+AGG | - | chr4_2:55345409-55345428 | Msa0608330:intron | 30.0% | |
| ! | TTCCAATGTGAATTTGTTTC+CGG | - | chr4_2:55345627-55345646 | Msa0608330:intron | 30.0% |
| CAATACTATAAAGTGAAGCA+AGG | - | chr4_2:55345702-55345721 | Msa0608330:CDS | 30.0% | |
| !! | GTTTCTAAAGTGAGCAAATA+AGG | + | chr4_2:55345736-55345755 | None:intergenic | 30.0% |
| CTAACAATTAGCATCTATAG+AGG | + | chr4_2:55345803-55345822 | None:intergenic | 30.0% | |
| ACTCAAACTGCATAATACAA+GGG | + | chr4_2:55345827-55345846 | None:intergenic | 30.0% | |
| TACTCAAACTGCATAATACA+AGG | + | chr4_2:55345828-55345847 | None:intergenic | 30.0% | |
| TGAAAAAGTTACATTCCAGA+TGG | + | chr4_2:55345852-55345871 | None:intergenic | 30.0% | |
| !!! | TAACTTGCTGAGATTTTGAC+TGG | + | chr4_2:55339005-55339024 | None:intergenic | 35.0% |
| ! | TGAGAAATCTGGGATCATTT+CGG | + | chr4_2:55339069-55339088 | None:intergenic | 35.0% |
| AACCAGATCTTGAGAAATCT+GGG | + | chr4_2:55339079-55339098 | None:intergenic | 35.0% | |
| AGTGTGACATGAAAACATAG+TGG | - | chr4_2:55339238-55339257 | Msa0608330:three_prime_UTR | 35.0% | |
| TTGCATGTTCACTAAACTCA+TGG | - | chr4_2:55339302-55339321 | Msa0608330:CDS | 35.0% | |
| TCATGAAGTGATTTGATTGG+AGG | + | chr4_2:55339415-55339434 | None:intergenic | 35.0% | |
| GCATCATGAAGTGATTTGAT+TGG | + | chr4_2:55339418-55339437 | None:intergenic | 35.0% | |
| !!! | ATGAGTACTTGTTGCTTTTG+AGG | - | chr4_2:55339771-55339790 | Msa0608330:intron | 35.0% |
| TGAGAACCTTTCAATTTCAG+AGG | + | chr4_2:55339799-55339818 | None:intergenic | 35.0% | |
| !!! | GGTTCTCAACTTGGTTTTAT+TGG | - | chr4_2:55339811-55339830 | Msa0608330:intron | 35.0% |
| !! | TGCATGTTTCTTTGAAGCAA+AGG | - | chr4_2:55339936-55339955 | Msa0608330:CDS | 35.0% |
| !! | GCATGTTTCTTTGAAGCAAA+GGG | - | chr4_2:55339937-55339956 | Msa0608330:CDS | 35.0% |
| ! | GCATTTCCAAGTTAGTGTTT+TGG | - | chr4_2:55339995-55340014 | Msa0608330:intron | 35.0% |
| AGTTAGAATTCCTTGACTCA+TGG | - | chr4_2:55340133-55340152 | Msa0608330:intron | 35.0% | |
| GTTAGAATTCCTTGACTCAT+GGG | - | chr4_2:55340134-55340153 | Msa0608330:intron | 35.0% | |
| TGCTTCAACACAATGTAAAC+TGG | - | chr4_2:55340273-55340292 | Msa0608330:intron | 35.0% | |
| AAAGATTCACTCACTTCTCA+TGG | + | chr4_2:55340327-55340346 | None:intergenic | 35.0% | |
| !! | TAGATCTTGAATGGGCTATT+TGG | - | chr4_2:55340404-55340423 | Msa0608330:intron | 35.0% |
| !! | AGATCTTGAATGGGCTATTT+GGG | - | chr4_2:55340405-55340424 | Msa0608330:intron | 35.0% |
| TATTTGGGTGATAGACATCT+TGG | - | chr4_2:55340420-55340439 | Msa0608330:intron | 35.0% | |
| AGCAACTTATAAACACTGAG+AGG | - | chr4_2:55340548-55340567 | Msa0608330:intron | 35.0% | |
| !! | GAATGTACTGGTTCAATTGA+TGG | + | chr4_2:55340676-55340695 | None:intergenic | 35.0% |
| CGTAATGAAGTAGATGTATC+TGG | + | chr4_2:55340736-55340755 | None:intergenic | 35.0% | |
| AAAATGAGCCAAGACTCTTT+AGG | - | chr4_2:55340769-55340788 | Msa0608330:intron | 35.0% | |
| !!! | GGTGTGAGATTTTTTGCATT+AGG | - | chr4_2:55341145-55341164 | Msa0608330:intron | 35.0% |
| GAAATGCAGAGCCAATTAAA+TGG | - | chr4_2:55341206-55341225 | Msa0608330:intron | 35.0% | |
| TCGAGCACTAAATCTTATAC+AGG | - | chr4_2:55341678-55341697 | Msa0608330:intron | 35.0% | |
| TGCATTCTTCAAAGTGGATA+AGG | + | chr4_2:55341712-55341731 | None:intergenic | 35.0% | |
| TGCGTACAATACACCAAAAA+TGG | - | chr4_2:55341927-55341946 | Msa0608330:CDS | 35.0% | |
| GTACAATACACCAAAAATGG+TGG | - | chr4_2:55341930-55341949 | Msa0608330:CDS | 35.0% | |
| CATTAAAAAAAAGGGCAACC+CGG | + | chr4_2:55341997-55342016 | None:intergenic | 35.0% | |
| TGCGTACAATACACCAAAAA+TGG | - | chr4_2:55341927-55341946 | Msa0608330:CDS | 35.0% | |
| CATTAAAAAAAAGGGCAACC+CGG | + | chr4_2:55341997-55342016 | None:intergenic | 35.0% | |
| TGCGTACAATACACCAAAAA+TGG | - | chr4_2:55341927-55341946 | Msa0608330:CDS | 35.0% | |
| GTACAATACACCAAAAATGG+TGG | - | chr4_2:55341930-55341949 | Msa0608330:CDS | 35.0% | |
| CATTAAAAAAAAGGGCAACC+CGG | + | chr4_2:55341997-55342016 | None:intergenic | 35.0% | |
| TTATTGGTCCATGTAACTGT+AGG | - | chr4_2:55342290-55342309 | Msa0608330:intron | 35.0% | |
| AACAAGATCCTACAGTTACA+TGG | + | chr4_2:55342301-55342320 | None:intergenic | 35.0% | |
| AAATCGAACCTGCTATGAAA+TGG | - | chr4_2:55342343-55342362 | Msa0608330:intron | 35.0% | |
| AATCGAACCTGCTATGAAAT+GGG | - | chr4_2:55342344-55342363 | Msa0608330:intron | 35.0% | |
| ! | GAACAGTTTCTAGAAGAGTT+AGG | - | chr4_2:55342446-55342465 | Msa0608330:intron | 35.0% |
| ATGGTACTTAATTCCACCTT+TGG | + | chr4_2:55342554-55342573 | None:intergenic | 35.0% | |
| ! | AGGTTTTGCTCAAGTATACA+AGG | - | chr4_2:55342597-55342616 | Msa0608330:intron | 35.0% |
| GATACATGTAAAACTCCCAA+GGG | + | chr4_2:55342767-55342786 | None:intergenic | 35.0% | |
| ! | TTCATAGAAAAGCAGGTTGA+TGG | + | chr4_2:55342842-55342861 | None:intergenic | 35.0% |
| GTAGATGTTCATAGAAAAGC+AGG | + | chr4_2:55342849-55342868 | None:intergenic | 35.0% | |
| CTGACATCTTAATCTTTCAG+AGG | - | chr4_2:55342881-55342900 | Msa0608330:intron | 35.0% | |
| ATCTTTCAGAGGTCAAACTA+TGG | - | chr4_2:55342892-55342911 | Msa0608330:intron | 35.0% | |
| GATGTTGAACGAGATAATGA+GGG | + | chr4_2:55343016-55343035 | None:intergenic | 35.0% | |
| TGATGTTGAACGAGATAATG+AGG | + | chr4_2:55343017-55343036 | None:intergenic | 35.0% | |
| ATCAACTCATATGTGGTCAT+AGG | - | chr4_2:55343078-55343097 | Msa0608330:intron | 35.0% | |
| TGTGGTCATAGGAAAATTCA+TGG | - | chr4_2:55343089-55343108 | Msa0608330:intron | 35.0% | |
| ATCTGCTTATTCGTTATGCT+AGG | - | chr4_2:55343208-55343227 | Msa0608330:CDS | 35.0% | |
| ATTATCGAGGTAAAAGGCAA+GGG | + | chr4_2:55343320-55343339 | None:intergenic | 35.0% | |
| AATTATCGAGGTAAAAGGCA+AGG | + | chr4_2:55343321-55343340 | None:intergenic | 35.0% | |
| !!! | TTTTCCCCATCTTAGTTTTG+AGG | - | chr4_2:55343387-55343406 | Msa0608330:intron | 35.0% |
| GCATATCCTCAAAACTAAGA+TGG | + | chr4_2:55343396-55343415 | None:intergenic | 35.0% | |
| GATACTTTACTAGATGCAGA+GGG | + | chr4_2:55343507-55343526 | None:intergenic | 35.0% | |
| TGATACTTTACTAGATGCAG+AGG | + | chr4_2:55343508-55343527 | None:intergenic | 35.0% | |
| ATCTTGATGTATTTGGACAG+GGG | + | chr4_2:55343590-55343609 | None:intergenic | 35.0% | |
| CAGTTTCAGGACTAAAATGA+TGG | - | chr4_2:55343954-55343973 | Msa0608330:intron | 35.0% | |
| CTAATATCTAAGCATCCATG+TGG | - | chr4_2:55344068-55344087 | Msa0608330:intron | 35.0% | |
| GTGATGTCTCTAATTGAATC+CGG | + | chr4_2:55344133-55344152 | None:intergenic | 35.0% | |
| !! | CTTCAAAAGCATCTACTGAA+AGG | + | chr4_2:55344295-55344314 | None:intergenic | 35.0% |
| CTGGAGTGAAAGTTAAAGTA+TGG | - | chr4_2:55344334-55344353 | Msa0608330:intron | 35.0% | |
| GAGTGAAAGTTAAAGTATGG+TGG | - | chr4_2:55344337-55344356 | Msa0608330:intron | 35.0% | |
| !! | TTTCCACTTTTACTAGCAGA+AGG | - | chr4_2:55344380-55344399 | Msa0608330:intron | 35.0% |
| AATCCTTCTGCTAGTAAAAG+TGG | + | chr4_2:55344386-55344405 | None:intergenic | 35.0% | |
| ! | TCATGGTGTTTTATGACCAT+TGG | - | chr4_2:55344409-55344428 | Msa0608330:intron | 35.0% |
| ! | GTAGCTTTTATCTCAACCAA+TGG | + | chr4_2:55344428-55344447 | None:intergenic | 35.0% |
| CATTCAAATGCACGTCAAAA+CGG | + | chr4_2:55344472-55344491 | None:intergenic | 35.0% | |
| TAATCTCTTTCCAGATCACA+CGG | - | chr4_2:55344769-55344788 | Msa0608330:CDS | 35.0% | |
| TTCTGTTATCACTTGTCAAC+AGG | - | chr4_2:55344934-55344953 | Msa0608330:intron | 35.0% | |
| GATGCTGCATAATACCTATA+TGG | - | chr4_2:55344991-55345010 | Msa0608330:intron | 35.0% | |
| AGGACCACCTAGTAAAAATT+CGG | - | chr4_2:55345134-55345153 | Msa0608330:intron | 35.0% | |
| ! | AAGGTGACCGAATTTTTACT+AGG | + | chr4_2:55345144-55345163 | None:intergenic | 35.0% |
| ATAGGTAGAGGGAAACTAAA+AGG | + | chr4_2:55345163-55345182 | None:intergenic | 35.0% | |
| TTAGTTTCCCTCTACCTATT+TGG | - | chr4_2:55345164-55345183 | Msa0608330:intron | 35.0% | |
| AAAACACTATGCAGAACACA+GGG | + | chr4_2:55345459-55345478 | None:intergenic | 35.0% | |
| TAAAACACTATGCAGAACAC+AGG | + | chr4_2:55345460-55345479 | None:intergenic | 35.0% | |
| CAAGCAATCAAAAACAGACT+AGG | - | chr4_2:55345548-55345567 | Msa0608330:intron | 35.0% | |
| CAATCAAAAACAGACTAGGA+AGG | - | chr4_2:55345552-55345571 | Msa0608330:intron | 35.0% | |
| ! | TCCAATGTGAATTTGTTTCC+GGG | - | chr4_2:55345628-55345647 | Msa0608330:intron | 35.0% |
| GAGGCTAATGCATCATTTAA+AGG | + | chr4_2:55345784-55345803 | None:intergenic | 35.0% | |
| AGTATGATTGTTTCACTCGA+AGG | - | chr4_2:55345908-55345927 | Msa0608330:CDS | 35.0% | |
| AAAATTGTGCGAGTGTGTGA+GGG | + | chr4_2:55338902-55338921 | None:intergenic | 40.0% | |
| AAAAATTGTGCGAGTGTGTG+AGG | + | chr4_2:55338903-55338922 | None:intergenic | 40.0% | |
| ATCCCAGATTTCTCAAGATC+TGG | - | chr4_2:55339074-55339093 | Msa0608330:three_prime_UTR | 40.0% | |
| GAACCAGATCTTGAGAAATC+TGG | + | chr4_2:55339080-55339099 | None:intergenic | 40.0% | |
| !! | GAGGAACCTCTGAAATTGAA+AGG | - | chr4_2:55339790-55339809 | Msa0608330:intron | 40.0% |
| !! | CACATAAAGTGAAGCATCGT+TGG | + | chr4_2:55339911-55339930 | None:intergenic | 40.0% |
| TGTATGTTTCCCATGAGTCA+AGG | + | chr4_2:55340146-55340165 | None:intergenic | 40.0% | |
| TCACTCACTTCTCATGGATT+TGG | + | chr4_2:55340321-55340340 | None:intergenic | 40.0% | |
| GTTGCTGATATCGCAAACAA+CGG | + | chr4_2:55340534-55340553 | None:intergenic | 40.0% | |
| ! | AAGGATCTTGTTGATGGGAT+AGG | + | chr4_2:55340651-55340670 | None:intergenic | 40.0% |
| ATAACAAACTGGGCATCCTT+CGG | - | chr4_2:55340950-55340969 | Msa0608330:intron | 40.0% | |
| TTATAGGGTTTACGTAGACG+TGG | - | chr4_2:55341059-55341078 | Msa0608330:intron | 40.0% | |
| !!! | ACAAAGGCTCCATTTTTTCG+TGG | - | chr4_2:55341092-55341111 | Msa0608330:intron | 40.0% |
| CTCTGCATTTCTGTCAAACA+TGG | + | chr4_2:55341197-55341216 | None:intergenic | 40.0% | |
| TGCAGAGCCAATTAAATGGT+TGG | - | chr4_2:55341210-55341229 | Msa0608330:intron | 40.0% | |
| GCCAATTAAATGGTTGGAGA+AGG | - | chr4_2:55341216-55341235 | Msa0608330:intron | 40.0% | |
| GCCTTCTCCAACCATTTAAT+TGG | + | chr4_2:55341220-55341239 | None:intergenic | 40.0% | |
| ATTGAACTGAAACAGGGTTG+AGG | + | chr4_2:55341396-55341415 | None:intergenic | 40.0% | |
| CAAAAGGTCATTCAGAGTAG+AGG | + | chr4_2:55341527-55341546 | None:intergenic | 40.0% | |
| CCTTGATGCATTCTTCAAAG+TGG | + | chr4_2:55341718-55341737 | None:intergenic | 40.0% | |
| ! | CCACTTTGAAGAATGCATCA+AGG | - | chr4_2:55341715-55341734 | Msa0608330:intron | 40.0% |
| AAGATTGCCCATTTCATAGC+AGG | + | chr4_2:55342354-55342373 | None:intergenic | 40.0% | |
| ATTTCCATAAGCTGCTTCCT+TGG | - | chr4_2:55342479-55342498 | Msa0608330:intron | 40.0% | |
| TTAACTGGAACTTTCGTCCA+AGG | + | chr4_2:55342499-55342518 | None:intergenic | 40.0% | |
| ! | GCTCTTGTTTATCCTTGTCA+TGG | - | chr4_2:55342525-55342544 | Msa0608330:intron | 40.0% |
| TTTAGTGCCACAACATCATC+AGG | + | chr4_2:55342640-55342659 | None:intergenic | 40.0% | |
| ! | TGATGATGTTGTGGCACTAA+AGG | - | chr4_2:55342639-55342658 | Msa0608330:intron | 40.0% |
| TACAAAAACCAGCTTTCCCT+TGG | - | chr4_2:55342748-55342767 | Msa0608330:intron | 40.0% | |
| ACAAAAACCAGCTTTCCCTT+GGG | - | chr4_2:55342749-55342768 | Msa0608330:intron | 40.0% | |
| CGATACATGTAAAACTCCCA+AGG | + | chr4_2:55342768-55342787 | None:intergenic | 40.0% | |
| GGATGTCATCAACTCATATG+TGG | - | chr4_2:55343071-55343090 | Msa0608330:intron | 40.0% | |
| !! | CATGATGTTGGCTTGATTCA+TGG | - | chr4_2:55343168-55343187 | Msa0608330:CDS | 40.0% |
| ! | AGATTCGAGTATTGCAGTAC+AGG | - | chr4_2:55343559-55343578 | Msa0608330:intron | 40.0% |
| ! | GATTCGAGTATTGCAGTACA+GGG | - | chr4_2:55343560-55343579 | Msa0608330:intron | 40.0% |
| TCTTGATGTATTTGGACAGG+GGG | + | chr4_2:55343589-55343608 | None:intergenic | 40.0% | |
| CCATTCTCTCTTTCTATGAG+TGG | + | chr4_2:55343666-55343685 | None:intergenic | 40.0% | |
| CCACTCATAGAAAGAGAGAA+TGG | - | chr4_2:55343663-55343682 | Msa0608330:intron | 40.0% | |
| AGAGAGAATGGAATTTCCAG+TGG | - | chr4_2:55343675-55343694 | Msa0608330:intron | 40.0% | |
| GAGAGAATGGAATTTCCAGT+GGG | - | chr4_2:55343676-55343695 | Msa0608330:intron | 40.0% | |
| TACACTTTCAGGGACCAAAA+TGG | + | chr4_2:55343709-55343728 | None:intergenic | 40.0% | |
| !!! | TGTCACTTTTGTCCCTAACT+GGG | - | chr4_2:55343735-55343754 | Msa0608330:intron | 40.0% |
| TTGGGTTTATAGCCCAGTTA+GGG | + | chr4_2:55343750-55343769 | None:intergenic | 40.0% | |
| ! | TTTGGGTTTATAGCCCAGTT+AGG | + | chr4_2:55343751-55343770 | None:intergenic | 40.0% |
| TCCCTGACATTATAAAGCTC+AGG | - | chr4_2:55343801-55343820 | Msa0608330:intron | 40.0% | |
| ! | CCCTGAGCTTTATAATGTCA+GGG | + | chr4_2:55343805-55343824 | None:intergenic | 40.0% |
| CCCTGACATTATAAAGCTCA+GGG | - | chr4_2:55343802-55343821 | Msa0608330:intron | 40.0% | |
| ! | TCCCTGAGCTTTATAATGTC+AGG | + | chr4_2:55343806-55343825 | None:intergenic | 40.0% |
| !!! | GGGACTATTTTGACGATTCA+AGG | - | chr4_2:55343882-55343901 | Msa0608330:intron | 40.0% |
| ! | TCAACGTAAGAAGTTGGTTG+TGG | + | chr4_2:55343999-55344018 | None:intergenic | 40.0% |
| GTAGACACAATTATGCCACA+TGG | + | chr4_2:55344086-55344105 | None:intergenic | 40.0% | |
| ! | ACCACAAAGAGCATATATGC+CGG | - | chr4_2:55344111-55344130 | Msa0608330:intron | 40.0% |
| !!! | GCTGCACTAGTTTTGTAAGA+GGG | + | chr4_2:55344190-55344209 | None:intergenic | 40.0% |
| !!! | TGCTGCACTAGTTTTGTAAG+AGG | + | chr4_2:55344191-55344210 | None:intergenic | 40.0% |
| CTAGCAGAAGGATTTACTCA+TGG | - | chr4_2:55344392-55344411 | Msa0608330:intron | 40.0% | |
| ! | GCTTAGATGATTGCCATTTG+TGG | - | chr4_2:55344543-55344562 | Msa0608330:intron | 40.0% |
| ! | AGATGATTGCCATTTGTGGA+TGG | - | chr4_2:55344547-55344566 | Msa0608330:intron | 40.0% |
| CAATGAGTACCATCCACAAA+TGG | + | chr4_2:55344559-55344578 | None:intergenic | 40.0% | |
| TCCAGATCACACGGTATTTA+AGG | - | chr4_2:55344778-55344797 | Msa0608330:CDS | 40.0% | |
| CCAGATCACACGGTATTTAA+GGG | - | chr4_2:55344779-55344798 | Msa0608330:CDS | 40.0% | |
| CGGTATTTAAGGGAGATTGT+AGG | - | chr4_2:55344789-55344808 | Msa0608330:CDS | 40.0% | |
| ! | TTTTCGATGCATTGAGATGC+AGG | - | chr4_2:55344820-55344839 | Msa0608330:CDS | 40.0% |
| TCGTATGAACAACACCACAA+AGG | + | chr4_2:55344973-55344992 | None:intergenic | 40.0% | |
| TTCCCAGACTACCCTTTAAA+CGG | - | chr4_2:55345056-55345075 | Msa0608330:intron | 40.0% | |
| TACCGTTTAAAGGGTAGTCT+GGG | + | chr4_2:55345061-55345080 | None:intergenic | 40.0% | |
| ATACCGTTTAAAGGGTAGTC+TGG | + | chr4_2:55345062-55345081 | None:intergenic | 40.0% | |
| ! | GTGACCGAATTTTTACTAGG+TGG | + | chr4_2:55345141-55345160 | None:intergenic | 40.0% |
| AAGATGCTTAATGACTACCC+TGG | - | chr4_2:55345320-55345339 | Msa0608330:intron | 40.0% | |
| GCAACAACTTCCTATCATCA+TGG | + | chr4_2:55345346-55345365 | None:intergenic | 40.0% | |
| TGATGATAGGAAGTTGTTGC+AGG | - | chr4_2:55345346-55345365 | Msa0608330:intron | 40.0% | |
| TCCCGGAAACAAATTCACAT+TGG | + | chr4_2:55345632-55345651 | None:intergenic | 40.0% | |
| ATGCAGTTTGAGTAACCATC+TGG | - | chr4_2:55345834-55345853 | Msa0608330:intron | 40.0% | |
| TTGTGAAAGTGGAGGAGTTG+CGG | + | chr4_2:55338813-55338832 | None:intergenic | 45.0% | |
| TTCAATGGCGGTTGTGAAAG+TGG | + | chr4_2:55338824-55338843 | None:intergenic | 45.0% | |
| TAAGAGAGGGTCTTCAATGG+CGG | + | chr4_2:55338836-55338855 | None:intergenic | 45.0% | |
| AGGTAAGAGAGGGTCTTCAA+TGG | + | chr4_2:55338839-55338858 | None:intergenic | 45.0% | |
| ! | ACCCTCTCTTACCTTTTCTC+CGG | - | chr4_2:55338845-55338864 | Msa0608330:three_prime_UTR | 45.0% |
| ACCGGAGAAAAGGTAAGAGA+GGG | + | chr4_2:55338849-55338868 | None:intergenic | 45.0% | |
| AACCGGAGAAAAGGTAAGAG+AGG | + | chr4_2:55338850-55338869 | None:intergenic | 45.0% | |
| AGAGAGTAGAACCGGAGAAA+AGG | + | chr4_2:55338859-55338878 | None:intergenic | 45.0% | |
| GAGAAGAGAGAGAGTAGAAC+CGG | + | chr4_2:55338867-55338886 | None:intergenic | 45.0% | |
| !!! | ATTTTGACTGGAGGAAGTGG+TGG | + | chr4_2:55338993-55339012 | None:intergenic | 45.0% |
| !!! | GAGATTTTGACTGGAGGAAG+TGG | + | chr4_2:55338996-55339015 | None:intergenic | 45.0% |
| !!! | CTTGCTGAGATTTTGACTGG+AGG | + | chr4_2:55339002-55339021 | None:intergenic | 45.0% |
| ! | ATCTGGGATCATTTCGGTAG+CGG | + | chr4_2:55339063-55339082 | None:intergenic | 45.0% |
| GCTGACACCATCTATAAGCT+CGG | - | chr4_2:55339973-55339992 | Msa0608330:CDS | 45.0% | |
| GGAAATGCCGAGCTTATAGA+TGG | + | chr4_2:55339983-55340002 | None:intergenic | 45.0% | |
| ! | ACTGGTTTCATGAAACACCG+AGG | - | chr4_2:55340291-55340310 | Msa0608330:intron | 45.0% |
| ! | CTCATGGATTTGGAATGCCT+CGG | + | chr4_2:55340311-55340330 | None:intergenic | 45.0% |
| CTCTGTAAGTTGCACAGGTT+CGG | + | chr4_2:55340490-55340509 | None:intergenic | 45.0% | |
| CTTCTCTCTGTAAGTTGCAC+AGG | + | chr4_2:55340495-55340514 | None:intergenic | 45.0% | |
| TGGGCAAGGATCTTGTTGAT+GGG | + | chr4_2:55340656-55340675 | None:intergenic | 45.0% | |
| ATGGGCAAGGATCTTGTTGA+TGG | + | chr4_2:55340657-55340676 | None:intergenic | 45.0% | |
| ! | ACTGGTTCAATTGATGGGCA+AGG | + | chr4_2:55340670-55340689 | None:intergenic | 45.0% |
| TGTTGGATGATCAGTTCAGC+TGG | + | chr4_2:55340806-55340825 | None:intergenic | 45.0% | |
| CAGCCGGTCTCATAACAAAA+TGG | + | chr4_2:55341909-55341928 | None:intergenic | 45.0% | |
| ! | TTTGGTGTATTGTACGCAGC+CGG | + | chr4_2:55341925-55341944 | None:intergenic | 45.0% |
| ATCCTTGTCATGGCATCCAA+AGG | - | chr4_2:55342535-55342554 | Msa0608330:intron | 45.0% | |
| ! | CAGTGATCCTGATGATGTTG+TGG | - | chr4_2:55342630-55342649 | Msa0608330:intron | 45.0% |
| TGTGGCACTAAAGGTGATGA+CGG | - | chr4_2:55342648-55342667 | Msa0608330:intron | 45.0% | |
| TAAAACTCCCAAGGGAAAGC+TGG | + | chr4_2:55342759-55342778 | None:intergenic | 45.0% | |
| ! | TTTAGCTCATGGGACACTAC+AGG | - | chr4_2:55342969-55342988 | Msa0608330:intron | 45.0% |
| CAAAATGGTGGTTTACCCAC+TGG | + | chr4_2:55343694-55343713 | None:intergenic | 45.0% | |
| ! | CAGTGGGTAAACCACCATTT+TGG | - | chr4_2:55343692-55343711 | Msa0608330:intron | 45.0% |
| ACTTTCAGGGACCAAAATGG+TGG | + | chr4_2:55343706-55343725 | None:intergenic | 45.0% | |
| GACAGCATCGTACACTTTCA+GGG | + | chr4_2:55343719-55343738 | None:intergenic | 45.0% | |
| TGACAGCATCGTACACTTTC+AGG | + | chr4_2:55343720-55343739 | None:intergenic | 45.0% | |
| !!! | CTGTCACTTTTGTCCCTAAC+TGG | - | chr4_2:55343734-55343753 | Msa0608330:intron | 45.0% |
| ! | ACTGTAGTGTGCTGTCACTT+TGG | + | chr4_2:55343938-55343957 | None:intergenic | 45.0% |
| TGACAGCACACTACAGTTTC+AGG | - | chr4_2:55343941-55343960 | Msa0608330:intron | 45.0% | |
| TCCGGCATATATGCTCTTTG+TGG | + | chr4_2:55344115-55344134 | None:intergenic | 45.0% | |
| CTAAGAACCCATCTTCTGTG+AGG | + | chr4_2:55344606-55344625 | None:intergenic | 45.0% | |
| ! | AGGGTCTTTGTCTTGTTGAC+TGG | - | chr4_2:55344729-55344748 | Msa0608330:intron | 45.0% |
| ! | GGGTCTTTGTCTTGTTGACT+GGG | - | chr4_2:55344730-55344749 | Msa0608330:CDS | 45.0% |
| ! | GGTCTTTGTCTTGTTGACTG+GGG | - | chr4_2:55344731-55344750 | Msa0608330:CDS | 45.0% |
| CCCTTAAATACCGTGTGATC+TGG | + | chr4_2:55344782-55344801 | None:intergenic | 45.0% | |
| AAGGGAGATTGTAGGACTTC+TGG | - | chr4_2:55344797-55344816 | Msa0608330:CDS | 45.0% | |
| GGACTCACCTGAAATTTCCA+CGG | + | chr4_2:55344854-55344873 | None:intergenic | 45.0% | |
| TGTCAACAGGCAGATGCATA+TGG | - | chr4_2:55344947-55344966 | Msa0608330:intron | 45.0% | |
| ACTTCCTATCATCATGGCCA+GGG | + | chr4_2:55345340-55345359 | None:intergenic | 45.0% | |
| AACTTCCTATCATCATGGCC+AGG | + | chr4_2:55345341-55345360 | None:intergenic | 45.0% | |
| GGAATTGAAGAAGTCCTTCC+AGG | - | chr4_2:55345367-55345386 | Msa0608330:intron | 45.0% | |
| AGAGCTGATATAGTCCTGGA+AGG | + | chr4_2:55345384-55345403 | None:intergenic | 45.0% | |
| GATCAGAGCTGATATAGTCC+TGG | + | chr4_2:55345388-55345407 | None:intergenic | 45.0% | |
| ATAGACAGCTACAGCAGAAG+TGG | + | chr4_2:55345497-55345516 | None:intergenic | 45.0% | |
| ! | AGGAGCATGTGATGGAAAAC+AGG | + | chr4_2:55345589-55345608 | None:intergenic | 45.0% |
| CATCACATGCTCCTTAGTCA+CGG | - | chr4_2:55345595-55345614 | Msa0608330:intron | 45.0% | |
| ! | AAGAGTCTTGTCCGTGACTA+AGG | + | chr4_2:55345609-55345628 | None:intergenic | 45.0% |
| AATGGCGGTTGTGAAAGTGG+AGG | + | chr4_2:55338821-55338840 | None:intergenic | 50.0% | |
| GTTTGAACGGTTTGCCAGCT+TGG | - | chr4_2:55339743-55339762 | Msa0608330:CDS | 50.0% | |
| AGTACTCATCACGTCCAAGC+TGG | + | chr4_2:55339760-55339779 | None:intergenic | 50.0% | |
| TTTACGTAGACGTGGCCTGA+AGG | - | chr4_2:55341067-55341086 | Msa0608330:intron | 50.0% | |
| ATGGAGCCTTTGTCACCTTC+AGG | + | chr4_2:55341085-55341104 | None:intergenic | 50.0% | |
| CAAGGTTGCTTCAAGCCAGA+AGG | - | chr4_2:55341276-55341295 | Msa0608330:intron | 50.0% | |
| !! | TTCAGAGTAGAGGCATCCCA+TGG | + | chr4_2:55341517-55341536 | None:intergenic | 50.0% |
| CTAAAGCTCCCGCATACGTA+GGG | + | chr4_2:55341970-55341989 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACGT+AGG | + | chr4_2:55341971-55341990 | None:intergenic | 50.0% | |
| ! | GGAAGGGGTCTCACCATTTT+TGG | + | chr4_2:55342065-55342084 | None:intergenic | 50.0% |
| AAAATGGTGAGACCCCTTCC+CGG | - | chr4_2:55342065-55342084 | Msa0608330:intron | 50.0% | |
| CTAAAGCTCCCGCATACGTA+GGG | + | chr4_2:55341970-55341989 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACGT+AGG | + | chr4_2:55341971-55341990 | None:intergenic | 50.0% | |
| CTAAAGCTCCCGCATACGTA+GGG | + | chr4_2:55341970-55341989 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACGT+AGG | + | chr4_2:55341971-55341990 | None:intergenic | 50.0% | |
| TCGTCCAAGGAAGCAGCTTA+TGG | + | chr4_2:55342486-55342505 | None:intergenic | 50.0% | |
| CACCTTTGGATGCCATGACA+AGG | + | chr4_2:55342540-55342559 | None:intergenic | 50.0% | |
| CTTGTCATGGCATCCAAAGG+TGG | - | chr4_2:55342538-55342557 | Msa0608330:intron | 50.0% | |
| TACCATATCAAGGGCTGTGC+TGG | - | chr4_2:55342568-55342587 | Msa0608330:intron | 50.0% | |
| AGGGGTAACCTCACAGAAGA+TGG | - | chr4_2:55344595-55344614 | Msa0608330:intron | 50.0% | |
| GGGGTAACCTCACAGAAGAT+GGG | - | chr4_2:55344596-55344615 | Msa0608330:intron | 50.0% | |
| ! | GATGGGTTCTTAGACCGAAG+CGG | - | chr4_2:55344613-55344632 | Msa0608330:intron | 50.0% |
| TCTTAGACCGAAGCGGTTGT+TGG | - | chr4_2:55344620-55344639 | Msa0608330:intron | 50.0% | |
| GATCATGCCAACAACCGCTT+CGG | + | chr4_2:55344630-55344649 | None:intergenic | 50.0% | |
| AAGCGGTTGTTGGCATGATC+AGG | - | chr4_2:55344630-55344649 | Msa0608330:intron | 50.0% | |
| ! | TGTCTTGTTGACTGGGGAAG+AGG | - | chr4_2:55344737-55344756 | Msa0608330:CDS | 50.0% |
| ! | GTCTTGTTGACTGGGGAAGA+GGG | - | chr4_2:55344738-55344757 | Msa0608330:CDS | 50.0% |
| TCGATGCATTGAGATGCAGG+AGG | - | chr4_2:55344823-55344842 | Msa0608330:CDS | 50.0% | |
| GCATTGAGATGCAGGAGGAT+AGG | - | chr4_2:55344828-55344847 | Msa0608330:CDS | 50.0% | |
| GGATAGGCCGTGGAAATTTC+AGG | - | chr4_2:55344844-55344863 | Msa0608330:CDS | 50.0% | |
| GCAGATGCATATGGCCTTTG+TGG | - | chr4_2:55344956-55344975 | Msa0608330:intron | 50.0% | |
| ACAAAAGGAAGGGTCTGCTG+TGG | + | chr4_2:55345215-55345234 | None:intergenic | 50.0% | |
| GTTACTGGAACGTCGAGCTA+TGG | - | chr4_2:55345282-55345301 | Msa0608330:intron | 50.0% | |
| ACTACCCTGGCCATGATGAT+AGG | - | chr4_2:55345333-55345352 | Msa0608330:intron | 50.0% | |
| AGGAGTTACTCGCGAAGCAA+AGG | - | chr4_2:55345429-55345448 | Msa0608330:intron | 50.0% | |
| GGAGTTACTCGCGAAGCAAA+GGG | - | chr4_2:55345430-55345449 | Msa0608330:intron | 50.0% | |
| ! | CGTGACTAAGGAGCATGTGA+TGG | + | chr4_2:55345597-55345616 | None:intergenic | 50.0% |
| TGAAAGTGGAGGAGTTGCGG+AGG | + | chr4_2:55338810-55338829 | None:intergenic | 55.0% | |
| ACGTGGCCTGAAGGTGACAA+AGG | - | chr4_2:55341076-55341095 | Msa0608330:intron | 55.0% | |
| ! | GGAAGGGGTCCCACCATTTT+TGG | + | chr4_2:55341943-55341962 | None:intergenic | 55.0% |
| ! | AAAATGGTGGGACCCCTTCC+CGG | - | chr4_2:55341943-55341962 | Msa0608330:CDS | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr4_2:55341975-55341994 | Msa0608330:intron | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr4_2:55341975-55341994 | Msa0608330:intron | 55.0% |
| ! | GGAAGGGGTCCCACCATTTT+TGG | + | chr4_2:55341943-55341962 | None:intergenic | 55.0% |
| ! | AAAATGGTGGGACCCCTTCC+CGG | - | chr4_2:55341943-55341962 | Msa0608330:CDS | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr4_2:55341975-55341994 | Msa0608330:intron | 55.0% |
| GTCCAGCACAGCCCTTGATA+TGG | + | chr4_2:55342573-55342592 | None:intergenic | 55.0% | |
| TATCAAGGGCTGTGCTGGAC+AGG | - | chr4_2:55342573-55342592 | Msa0608330:intron | 55.0% | |
| ATCAAGGGCTGTGCTGGACA+GGG | - | chr4_2:55342574-55342593 | Msa0608330:intron | 55.0% | |
| CATACGTAGGGTCCGGGAAG+GGG | + | chr4_2:55341958-55341977 | None:intergenic | 60.0% | |
| GCATACGTAGGGTCCGGGAA+GGG | + | chr4_2:55341959-55341978 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTACGTATG+CGG | - | chr4_2:55341958-55341977 | Msa0608330:CDS | 60.0% | |
| TTCCCGGACCCTACGTATGC+GGG | - | chr4_2:55341959-55341978 | Msa0608330:CDS | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr4_2:55341976-55341995 | Msa0608330:intron | 60.0% |
| CATACGTAGGGTCCGGGAAG+GGG | + | chr4_2:55341958-55341977 | None:intergenic | 60.0% | |
| GCATACGTAGGGTCCGGGAA+GGG | + | chr4_2:55341959-55341978 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTACGTATG+CGG | - | chr4_2:55341958-55341977 | Msa0608330:CDS | 60.0% | |
| TTCCCGGACCCTACGTATGC+GGG | - | chr4_2:55341959-55341978 | Msa0608330:CDS | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr4_2:55341976-55341995 | Msa0608330:intron | 60.0% |
| CATACGTAGGGTCCGGGAAG+GGG | + | chr4_2:55341958-55341977 | None:intergenic | 60.0% | |
| GCATACGTAGGGTCCGGGAA+GGG | + | chr4_2:55341959-55341978 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTACGTATG+CGG | - | chr4_2:55341958-55341977 | Msa0608330:CDS | 60.0% | |
| TTCCCGGACCCTACGTATGC+GGG | - | chr4_2:55341959-55341978 | Msa0608330:CDS | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr4_2:55341976-55341995 | Msa0608330:intron | 60.0% |
| AGATGCAGGAGGATAGGCCG+TGG | - | chr4_2:55344834-55344853 | Msa0608330:CDS | 60.0% | |
| ACACTTGCATGTGCGCGTCC+CGG | + | chr4_2:55345649-55345668 | None:intergenic | 60.0% | |
| CGCATACGTAGGGTCCGGGA+AGG | + | chr4_2:55341960-55341979 | None:intergenic | 65.0% | |
| CTCCCGCATACGTAGGGTCC+GGG | + | chr4_2:55341964-55341983 | None:intergenic | 65.0% | |
| GCTCCCGCATACGTAGGGTC+CGG | + | chr4_2:55341965-55341984 | None:intergenic | 65.0% | |
| CGCATACGTAGGGTCCGGGA+AGG | + | chr4_2:55341960-55341979 | None:intergenic | 65.0% | |
| CTCCCGCATACGTAGGGTCC+GGG | + | chr4_2:55341964-55341983 | None:intergenic | 65.0% | |
| GCTCCCGCATACGTAGGGTC+CGG | + | chr4_2:55341965-55341984 | None:intergenic | 65.0% | |
| CGCATACGTAGGGTCCGGGA+AGG | + | chr4_2:55341960-55341979 | None:intergenic | 65.0% | |
| CTCCCGCATACGTAGGGTCC+GGG | + | chr4_2:55341964-55341983 | None:intergenic | 65.0% | |
| GCTCCCGCATACGTAGGGTC+CGG | + | chr4_2:55341965-55341984 | None:intergenic | 65.0% | |
| AAGGGCTGTGCTGGACAGGG+AGG | - | chr4_2:55342577-55342596 | Msa0608330:intron | 65.0% | |
| ! | GGAGTTGCGGAGGAGCGTGG+TGG | + | chr4_2:55338800-55338819 | None:intergenic | 70.0% |
| GGAGGAGTTGCGGAGGAGCG+TGG | + | chr4_2:55338803-55338822 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 55338776 | 55345958 | 55338776 | ID=Msa0608330;Name=Msa0608330 |
| chr4_2 | mRNA | 55338776 | 55345958 | 55338776 | ID=Msa0608330-mRNA-1;Parent=Msa0608330;Name=Msa0608330-mRNA-1;_AED=0.11;_eAED=0.11;_QI=17|1|1|1|1|1|14|486|529 |
| chr4_2 | exon | 55338776 | 55339451 | 55338776 | ID=Msa0608330-mRNA-1:exon:14111;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55339657 | 55339778 | 55339657 | ID=Msa0608330-mRNA-1:exon:14110;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55339869 | 55340003 | 55339869 | ID=Msa0608330-mRNA-1:exon:14109;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55340083 | 55340137 | 55340083 | ID=Msa0608330-mRNA-1:exon:14108;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55341505 | 55341662 | 55341505 | ID=Msa0608330-mRNA-1:exon:14107;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55341744 | 55341833 | 55341744 | ID=Msa0608330-mRNA-1:exon:14106;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55341916 | 55341987 | 55341916 | ID=Msa0608330-mRNA-1:exon:14105;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55342074 | 55342177 | 55342074 | ID=Msa0608330-mRNA-1:exon:14104;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55342978 | 55343065 | 55342978 | ID=Msa0608330-mRNA-1:exon:14103;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55343155 | 55343265 | 55343155 | ID=Msa0608330-mRNA-1:exon:14102;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55343437 | 55343527 | 55343437 | ID=Msa0608330-mRNA-1:exon:14101;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55344730 | 55344887 | 55344730 | ID=Msa0608330-mRNA-1:exon:14100;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55345629 | 55345770 | 55345629 | ID=Msa0608330-mRNA-1:exon:14099;Parent=Msa0608330-mRNA-1 |
| chr4_2 | exon | 55345868 | 55345958 | 55345868 | ID=Msa0608330-mRNA-1:exon:14098;Parent=Msa0608330-mRNA-1 |
| chr4_2 | five_prime_UTR | 55345942 | 55345958 | 55345942 | ID=Msa0608330-mRNA-1:five_prime_utr;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55345868 | 55345941 | 55345868 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55345629 | 55345770 | 55345629 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55344730 | 55344887 | 55344730 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55343437 | 55343527 | 55343437 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55343155 | 55343265 | 55343155 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55342978 | 55343065 | 55342978 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55342074 | 55342177 | 55342074 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55341916 | 55341987 | 55341916 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55341744 | 55341833 | 55341744 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55341505 | 55341662 | 55341505 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55340083 | 55340137 | 55340083 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55339869 | 55340003 | 55339869 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55339657 | 55339778 | 55339657 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | CDS | 55339262 | 55339451 | 55339262 | ID=Msa0608330-mRNA-1:cds;Parent=Msa0608330-mRNA-1 |
| chr4_2 | three_prime_UTR | 55338776 | 55339261 | 55338776 | ID=Msa0608330-mRNA-1:three_prime_utr;Parent=Msa0608330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
