Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726090 | XP_003613885.1 | 96.761 | 494 | 12 | 2 | 1 | 490 | 1 | 494 | 0.0 | 997 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726090 | sp|Q6NQ51|RRT4_ARATH | 70.711 | 478 | 132 | 1 | 9 | 486 | 27 | 496 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726090 | G7JWH1 | 96.761 | 494 | 12 | 2 | 1 | 490 | 1 | 494 | 0.0 | 997 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0726090 | 0.803179 | 3.944695e-49 | -8.615850e-47 |
| Msa0016670 | Msa0726090 | 0.804007 | 2.655583e-49 | -8.615850e-47 |
| Msa0042280 | Msa0726090 | 0.809131 | 2.201527e-50 | -8.615850e-47 |
| Msa0048180 | Msa0726090 | 0.825130 | 5.542442e-54 | -8.615850e-47 |
| Msa0052610 | Msa0726090 | 0.834848 | 2.363873e-56 | -8.615850e-47 |
| Msa0052690 | Msa0726090 | 0.807032 | 6.160871e-50 | -8.615850e-47 |
| Msa0057610 | Msa0726090 | 0.822574 | 2.202864e-53 | -8.615850e-47 |
| Msa0057710 | Msa0726090 | 0.811159 | 8.050178e-51 | -8.615850e-47 |
| Msa0073670 | Msa0726090 | 0.810861 | 9.340114e-51 | -8.615850e-47 |
| Msa0076040 | Msa0726090 | 0.813059 | 3.100598e-51 | -8.615850e-47 |
| Msa0093850 | Msa0726090 | 0.807578 | 4.721235e-50 | -8.615850e-47 |
| Msa0666230 | Msa0726090 | 0.824389 | 8.286527e-54 | -8.615850e-47 |
| Msa0669520 | Msa0726090 | 0.852934 | 3.332561e-61 | -8.615850e-47 |
| Msa0702340 | Msa0726090 | 0.800117 | 1.675343e-48 | -8.615850e-47 |
| Msa0709780 | Msa0726090 | 0.815790 | 7.719665e-52 | -8.615850e-47 |
| Msa0726090 | Msa0738040 | 0.816110 | 6.547038e-52 | -8.615850e-47 |
| Msa0726090 | Msa0738100 | 0.823800 | 1.139754e-53 | -8.615850e-47 |
| Msa0726090 | Msa0766680 | 0.821806 | 3.319991e-53 | -8.615850e-47 |
| Msa0726090 | Msa0785130 | 0.832492 | 9.167603e-56 | -8.615850e-47 |
| Msa0726090 | Msa0788770 | 0.812330 | 4.475947e-51 | -8.615850e-47 |
| Msa0726090 | Msa0790400 | 0.800240 | 1.581193e-48 | -8.615850e-47 |
| Msa0726090 | Msa0817540 | 0.826145 | 3.185863e-54 | -8.615850e-47 |
| Msa0726090 | Msa0826500 | 0.806994 | 6.277231e-50 | -8.615850e-47 |
| Msa0726090 | Msa0846240 | 0.992833 | 9.977496e-196 | -8.615850e-47 |
| Msa0726090 | Msa0861510 | 0.801659 | 8.111597e-49 | -8.615850e-47 |
| Msa0726090 | Msa0963020 | 0.800166 | 1.637036e-48 | -8.615850e-47 |
| Msa0726090 | Msa1005820 | 0.813560 | 2.406580e-51 | -8.615850e-47 |
| Msa0726090 | Msa1006840 | 0.800394 | 1.471263e-48 | -8.615850e-47 |
| Msa0726090 | Msa1012720 | 0.807174 | 5.748478e-50 | -8.615850e-47 |
| Msa0726090 | Msa1019240 | 0.829796 | 4.211374e-55 | -8.615850e-47 |
| Msa0726090 | Msa1019260 | 0.832125 | 1.129878e-55 | -8.615850e-47 |
| Msa0726090 | Msa1079230 | 0.824782 | 6.699470e-54 | -8.615850e-47 |
| Msa0726090 | Msa1104140 | 0.801154 | 1.029459e-48 | -8.615850e-47 |
| Msa0726090 | Msa1104210 | 0.827407 | 1.591163e-54 | -8.615850e-47 |
| Msa0726090 | Msa1117550 | 0.823425 | 1.394881e-53 | -8.615850e-47 |
| Msa0726090 | Msa1124110 | 0.816243 | 6.114104e-52 | -8.615850e-47 |
| Msa0726090 | Msa1126510 | 0.808456 | 3.069904e-50 | -8.615850e-47 |
| Msa0726090 | Msa1127590 | 0.804706 | 1.899297e-49 | -8.615850e-47 |
| Msa0726090 | Msa1131560 | 0.817541 | 3.126021e-52 | -8.615850e-47 |
| Msa0726090 | Msa1145240 | 0.819592 | 1.070931e-52 | -8.615850e-47 |
| Msa0726090 | Msa1166870 | 0.810405 | 1.171720e-50 | -8.615850e-47 |
| Msa0726090 | Msa1168950 | 0.812160 | 4.875977e-51 | -8.615850e-47 |
| Msa0726090 | Msa1169040 | 0.821798 | 3.333005e-53 | -8.615850e-47 |
| Msa0726090 | Msa1174530 | 0.809056 | 2.285165e-50 | -8.615850e-47 |
| Msa0726090 | Msa1184370 | 0.808682 | 2.746502e-50 | -8.615850e-47 |
| Msa0726090 | Msa1227690 | 0.803462 | 3.445859e-49 | -8.615850e-47 |
| Msa0726090 | Msa1235250 | 0.808046 | 3.753277e-50 | -8.615850e-47 |
| Msa0726090 | Msa1271580 | 0.800016 | 1.756287e-48 | -8.615850e-47 |
| Msa0726090 | Msa1333560 | 0.824211 | 9.127048e-54 | -8.615850e-47 |
| Msa0726090 | Msa1349570 | 0.801626 | 8.238086e-49 | -8.615850e-47 |
| Msa0726090 | Msa1363330 | 0.818480 | 1.917895e-52 | -8.615850e-47 |
| Msa0726090 | Msa1379760 | 0.807057 | 6.086430e-50 | -8.615850e-47 |
| Msa0726090 | Msa1386600 | 0.818921 | 1.523087e-52 | -8.615850e-47 |
| Msa0726090 | Msa1427560 | 0.805060 | 1.601764e-49 | -8.615850e-47 |
| Msa0726090 | Msa1443930 | 0.813708 | 2.232540e-51 | -8.615850e-47 |
| Msa0726090 | Msa1449930 | 0.800071 | 1.711302e-48 | -8.615850e-47 |
| Msa0726090 | Msa1457400 | 0.800913 | 1.152932e-48 | -8.615850e-47 |
| Msa0128860 | Msa0726090 | 0.802907 | 4.488573e-49 | -8.615850e-47 |
| Msa0152870 | Msa0726090 | 0.808957 | 2.398602e-50 | -8.615850e-47 |
| Msa0167480 | Msa0726090 | 0.833924 | 4.031396e-56 | -8.615850e-47 |
| Msa0173890 | Msa0726090 | 0.815204 | 1.042154e-51 | -8.615850e-47 |
| Msa0174730 | Msa0726090 | 0.803737 | 3.022155e-49 | -8.615850e-47 |
| Msa0181610 | Msa0726090 | 0.815779 | 7.760645e-52 | -8.615850e-47 |
| Msa0196190 | Msa0726090 | 0.817875 | 2.628080e-52 | -8.615850e-47 |
| Msa0206840 | Msa0726090 | 0.803337 | 3.658433e-49 | -8.615850e-47 |
| Msa0231100 | Msa0726090 | 0.815490 | 9.003309e-52 | -8.615850e-47 |
| Msa0405650 | Msa0726090 | 0.802612 | 5.165455e-49 | -8.615850e-47 |
| Msa0423750 | Msa0726090 | 0.801195 | 1.009492e-48 | -8.615850e-47 |
| Msa0434920 | Msa0726090 | 0.801436 | 9.012161e-49 | -8.615850e-47 |
| Msa0435370 | Msa0726090 | 0.805573 | 1.250705e-49 | -8.615850e-47 |
| Msa0435420 | Msa0726090 | 0.807288 | 5.439101e-50 | -8.615850e-47 |
| Msa0443390 | Msa0726090 | 0.831733 | 1.411898e-55 | -8.615850e-47 |
| Msa0453230 | Msa0726090 | 0.801180 | 1.016634e-48 | -8.615850e-47 |
| Msa0241830 | Msa0726090 | 0.814912 | 1.209526e-51 | -8.615850e-47 |
| Msa0249540 | Msa0726090 | 0.815762 | 7.830111e-52 | -8.615850e-47 |
| Msa0262480 | Msa0726090 | 0.803592 | 3.238819e-49 | -8.615850e-47 |
| Msa0292400 | Msa0726090 | 0.804044 | 2.609392e-49 | -8.615850e-47 |
| Msa0296250 | Msa0726090 | 0.822846 | 1.903921e-53 | -8.615850e-47 |
| Msa0307850 | Msa0726090 | 0.807744 | 4.352403e-50 | -8.615850e-47 |
| Msa0326590 | Msa0726090 | 0.811563 | 6.577479e-51 | -8.615850e-47 |
| Msa0348830 | Msa0726090 | 0.807226 | 5.605441e-50 | -8.615850e-47 |
| Msa0518030 | Msa0726090 | 0.812804 | 3.525105e-51 | -8.615850e-47 |
| Msa0526540 | Msa0726090 | 0.822949 | 1.801256e-53 | -8.615850e-47 |
| Msa0527150 | Msa0726090 | 0.814091 | 1.837979e-51 | -8.615850e-47 |
| Msa0534750 | Msa0726090 | 0.829987 | 3.784961e-55 | -8.615850e-47 |
| Msa0576940 | Msa0726090 | 0.812624 | 3.860178e-51 | -8.615850e-47 |
| Msa0593700 | Msa0726090 | 0.801738 | 7.813006e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726090 | MtrunA17_Chr5g0417871 | 96.761 | 494 | 12 | 2 | 1 | 490 | 1 | 494 | 0.0 | 997 |
| Msa0726090 | MtrunA17_Chr4g0042711 | 79.668 | 482 | 95 | 2 | 9 | 490 | 28 | 506 | 0.0 | 821 |
| Msa0726090 | MtrunA17_Chr4g0061781 | 61.194 | 469 | 173 | 4 | 10 | 472 | 43 | 508 | 0.0 | 603 |
| Msa0726090 | MtrunA17_Chr6g0455571 | 59.871 | 466 | 182 | 3 | 9 | 472 | 45 | 507 | 0.0 | 600 |
| Msa0726090 | MtrunA17_Chr2g0307971 | 60.805 | 472 | 173 | 4 | 3 | 472 | 46 | 507 | 0.0 | 599 |
| Msa0726090 | MtrunA17_Chr5g0426591 | 49.392 | 411 | 196 | 4 | 75 | 473 | 101 | 511 | 1.92e-139 | 411 |
| Msa0726090 | MtrunA17_Chr4g0070551 | 47.739 | 398 | 201 | 5 | 81 | 476 | 228 | 620 | 7.52e-134 | 400 |
| Msa0726090 | MtrunA17_Chr4g0008451 | 47.912 | 407 | 200 | 6 | 76 | 475 | 222 | 623 | 9.58e-134 | 401 |
| Msa0726090 | MtrunA17_Chr3g0132371 | 47.887 | 426 | 203 | 6 | 68 | 477 | 120 | 542 | 2.39e-132 | 394 |
| Msa0726090 | MtrunA17_Chr5g0436321 | 46.482 | 398 | 206 | 5 | 80 | 475 | 160 | 552 | 5.55e-129 | 386 |
| Msa0726090 | MtrunA17_Chr3g0129981 | 47.433 | 409 | 190 | 7 | 84 | 477 | 117 | 515 | 3.15e-128 | 382 |
| Msa0726090 | MtrunA17_Chr5g0399311 | 43.099 | 413 | 212 | 9 | 77 | 483 | 120 | 515 | 1.00e-100 | 312 |
| Msa0726090 | MtrunA17_Chr4g0056061 | 41.606 | 411 | 217 | 8 | 77 | 481 | 104 | 497 | 4.29e-99 | 308 |
| Msa0726090 | MtrunA17_Chr3g0143821 | 43.434 | 396 | 209 | 9 | 82 | 475 | 112 | 494 | 2.58e-98 | 307 |
| Msa0726090 | MtrunA17_Chr5g0448581 | 44.192 | 396 | 199 | 9 | 84 | 474 | 122 | 500 | 1.81e-97 | 305 |
| Msa0726090 | MtrunA17_Chr1g0204121 | 38.498 | 426 | 228 | 10 | 70 | 478 | 77 | 485 | 1.38e-87 | 277 |
| Msa0726090 | MtrunA17_Chr3g0123521 | 39.295 | 397 | 213 | 10 | 71 | 448 | 141 | 528 | 4.88e-86 | 275 |
| Msa0726090 | MtrunA17_Chr5g0412251 | 37.442 | 430 | 220 | 10 | 81 | 474 | 86 | 502 | 4.78e-85 | 271 |
| Msa0726090 | MtrunA17_Chr3g0132951 | 36.652 | 442 | 228 | 11 | 68 | 473 | 90 | 515 | 3.28e-84 | 269 |
| Msa0726090 | MtrunA17_Chr4g0043911 | 35.024 | 414 | 246 | 10 | 81 | 480 | 150 | 554 | 4.96e-80 | 259 |
| Msa0726090 | MtrunA17_Chr5g0424241 | 37.864 | 412 | 226 | 11 | 82 | 473 | 158 | 559 | 1.74e-79 | 258 |
| Msa0726090 | MtrunA17_Chr4g0075311 | 37.642 | 441 | 220 | 11 | 78 | 473 | 161 | 591 | 9.28e-78 | 254 |
| Msa0726090 | MtrunA17_Chr1g0204141 | 36.300 | 427 | 239 | 10 | 70 | 478 | 77 | 488 | 2.29e-77 | 251 |
| Msa0726090 | MtrunA17_Chr2g0284071 | 35.520 | 442 | 236 | 8 | 75 | 475 | 209 | 642 | 6.42e-77 | 253 |
| Msa0726090 | MtrunA17_Chr1g0160781 | 34.474 | 409 | 241 | 9 | 81 | 473 | 149 | 546 | 3.42e-76 | 249 |
| Msa0726090 | MtrunA17_Chr7g0240241 | 91.129 | 124 | 7 | 1 | 240 | 359 | 1 | 124 | 7.19e-73 | 226 |
| Msa0726090 | MtrunA17_Chr3g0077321 | 34.719 | 409 | 244 | 11 | 81 | 475 | 147 | 546 | 1.47e-72 | 239 |
| Msa0726090 | MtrunA17_Chr4g0010511 | 36.386 | 404 | 232 | 9 | 84 | 479 | 236 | 622 | 8.88e-68 | 228 |
| Msa0726090 | MtrunA17_Chr3g0087291 | 35.264 | 397 | 238 | 8 | 84 | 475 | 176 | 558 | 2.17e-67 | 226 |
| Msa0726090 | MtrunA17_Chr4g0003561 | 32.603 | 365 | 224 | 8 | 81 | 441 | 75 | 421 | 2.44e-57 | 196 |
| Msa0726090 | MtrunA17_Chr1g0146501 | 31.715 | 309 | 183 | 9 | 78 | 363 | 82 | 385 | 1.54e-40 | 154 |
| Msa0726090 | MtrunA17_Chr3g0127811 | 29.722 | 360 | 214 | 10 | 22 | 363 | 7 | 345 | 1.34e-39 | 149 |
| Msa0726090 | MtrunA17_Chr7g0220381 | 30.693 | 303 | 191 | 6 | 70 | 356 | 87 | 386 | 2.26e-39 | 151 |
| Msa0726090 | MtrunA17_Chr4g0002361 | 26.888 | 331 | 193 | 14 | 81 | 400 | 86 | 378 | 3.13e-23 | 101 |
| Msa0726090 | MtrunA17_Chr2g0298881 | 25.000 | 344 | 201 | 10 | 81 | 410 | 35 | 335 | 4.11e-22 | 97.8 |
| Msa0726090 | MtrunA17_Chr1g0172911 | 50.000 | 68 | 10 | 1 | 79 | 122 | 19 | 86 | 4.45e-13 | 66.2 |
| Msa0726090 | MtrunA17_Chr1g0172911 | 59.184 | 49 | 20 | 0 | 193 | 241 | 80 | 128 | 3.97e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726090 | AT1G14020.1 | 70.711 | 478 | 132 | 1 | 9 | 486 | 27 | 496 | 0.0 | 730 |
| Msa0726090 | AT2G03280.1 | 68.172 | 465 | 133 | 4 | 9 | 472 | 30 | 480 | 0.0 | 673 |
| Msa0726090 | AT2G03280.2 | 64.431 | 492 | 133 | 5 | 9 | 472 | 30 | 507 | 0.0 | 659 |
| Msa0726090 | AT5G15740.1 | 58.925 | 465 | 186 | 3 | 9 | 472 | 38 | 498 | 0.0 | 582 |
| Msa0726090 | AT3G02250.1 | 57.849 | 465 | 191 | 3 | 9 | 472 | 38 | 498 | 0.0 | 570 |
| Msa0726090 | AT1G22460.1 | 46.925 | 439 | 219 | 6 | 45 | 474 | 125 | 558 | 1.49e-135 | 403 |
| Msa0726090 | AT2G37980.1 | 47.202 | 411 | 210 | 5 | 81 | 489 | 226 | 631 | 2.03e-134 | 403 |
| Msa0726090 | AT3G54100.1 | 46.731 | 413 | 208 | 6 | 76 | 481 | 212 | 619 | 1.25e-132 | 398 |
| Msa0726090 | AT5G35570.1 | 47.355 | 397 | 202 | 5 | 80 | 474 | 250 | 641 | 2.17e-129 | 390 |
| Msa0726090 | AT5G01100.1 | 48.241 | 398 | 198 | 5 | 81 | 474 | 216 | 609 | 8.85e-128 | 385 |
| Msa0726090 | AT5G64600.1 | 46.699 | 409 | 205 | 6 | 81 | 480 | 117 | 521 | 8.51e-126 | 377 |
| Msa0726090 | AT4G38390.1 | 44.670 | 394 | 206 | 6 | 81 | 473 | 123 | 505 | 2.25e-103 | 320 |
| Msa0726090 | AT1G76270.1 | 44.162 | 394 | 204 | 8 | 84 | 475 | 109 | 488 | 6.44e-103 | 319 |
| Msa0726090 | AT1G20550.1 | 41.176 | 408 | 224 | 7 | 84 | 489 | 112 | 505 | 6.49e-102 | 317 |
| Msa0726090 | AT4G16650.2 | 44.390 | 410 | 204 | 10 | 72 | 474 | 112 | 504 | 1.29e-94 | 297 |
| Msa0726090 | AT4G16650.1 | 44.390 | 410 | 204 | 10 | 72 | 474 | 112 | 504 | 1.29e-94 | 297 |
| Msa0726090 | AT4G24530.1 | 37.674 | 430 | 219 | 10 | 81 | 474 | 101 | 517 | 2.10e-86 | 275 |
| Msa0726090 | AT3G26370.1 | 38.287 | 397 | 217 | 9 | 71 | 448 | 149 | 536 | 2.62e-86 | 276 |
| Msa0726090 | AT1G04910.1 | 36.087 | 460 | 274 | 9 | 21 | 474 | 30 | 475 | 5.21e-86 | 274 |
| Msa0726090 | AT1G62330.1 | 35.682 | 440 | 227 | 10 | 82 | 475 | 222 | 651 | 6.11e-83 | 270 |
| Msa0726090 | AT1G38065.2 | 37.681 | 414 | 226 | 11 | 81 | 473 | 26 | 428 | 6.25e-83 | 264 |
| Msa0726090 | AT1G38065.1 | 37.681 | 414 | 226 | 11 | 81 | 473 | 36 | 438 | 8.41e-83 | 264 |
| Msa0726090 | AT5G65470.1 | 35.431 | 429 | 226 | 10 | 83 | 473 | 87 | 502 | 2.56e-82 | 264 |
| Msa0726090 | AT1G11990.1 | 39.706 | 408 | 220 | 11 | 82 | 473 | 191 | 588 | 3.40e-82 | 266 |
| Msa0726090 | AT1G38131.1 | 37.681 | 414 | 226 | 11 | 81 | 473 | 155 | 557 | 1.78e-81 | 264 |
| Msa0726090 | AT1G11990.2 | 36.629 | 445 | 219 | 11 | 82 | 473 | 176 | 610 | 3.05e-77 | 254 |
| Msa0726090 | AT1G14970.3 | 35.036 | 411 | 240 | 10 | 81 | 475 | 9 | 408 | 1.65e-76 | 246 |
| Msa0726090 | AT1G35510.1 | 35.366 | 410 | 242 | 9 | 80 | 475 | 158 | 558 | 4.08e-76 | 249 |
| Msa0726090 | AT1G14970.2 | 35.036 | 411 | 240 | 10 | 81 | 475 | 35 | 434 | 4.49e-76 | 246 |
| Msa0726090 | AT1G29200.4 | 37.644 | 433 | 223 | 10 | 81 | 474 | 70 | 494 | 4.63e-76 | 247 |
| Msa0726090 | AT1G29200.1 | 37.644 | 433 | 223 | 10 | 81 | 474 | 70 | 494 | 4.63e-76 | 247 |
| Msa0726090 | AT5G63390.1 | 37.845 | 399 | 228 | 8 | 84 | 476 | 167 | 551 | 1.61e-75 | 248 |
| Msa0726090 | AT1G14970.1 | 35.036 | 411 | 240 | 10 | 81 | 475 | 155 | 554 | 4.90e-75 | 246 |
| Msa0726090 | AT1G29200.2 | 37.644 | 433 | 223 | 10 | 81 | 474 | 186 | 610 | 5.41e-75 | 248 |
| Msa0726090 | AT2G01480.1 | 35.049 | 408 | 238 | 10 | 81 | 472 | 154 | 550 | 2.64e-74 | 244 |
| Msa0726090 | AT1G29200.3 | 37.471 | 427 | 220 | 10 | 87 | 474 | 2 | 420 | 5.24e-74 | 240 |
| Msa0726090 | AT2G01480.2 | 37.255 | 357 | 205 | 6 | 81 | 421 | 154 | 507 | 7.48e-74 | 243 |
| Msa0726090 | AT3G07900.1 | 34.596 | 396 | 247 | 5 | 84 | 477 | 191 | 576 | 3.96e-68 | 229 |
| Msa0726090 | AT2G44500.1 | 32.900 | 462 | 271 | 11 | 45 | 480 | 120 | 568 | 5.85e-67 | 225 |
| Msa0726090 | AT1G52630.1 | 33.333 | 372 | 226 | 9 | 74 | 442 | 67 | 419 | 7.34e-59 | 201 |
| Msa0726090 | AT1G52630.2 | 31.445 | 353 | 214 | 9 | 96 | 442 | 1 | 331 | 7.46e-50 | 174 |
| Msa0726090 | AT3G03810.2 | 33.981 | 309 | 187 | 6 | 70 | 363 | 78 | 384 | 3.63e-47 | 173 |
| Msa0726090 | AT3G03810.1 | 33.981 | 309 | 187 | 6 | 70 | 363 | 78 | 384 | 3.63e-47 | 173 |
| Msa0726090 | AT3G26370.2 | 38.636 | 220 | 122 | 6 | 71 | 280 | 149 | 365 | 1.78e-43 | 158 |
| Msa0726090 | AT3G30300.2 | 32.602 | 319 | 183 | 10 | 72 | 363 | 82 | 395 | 1.77e-42 | 160 |
| Msa0726090 | AT3G30300.1 | 32.602 | 319 | 183 | 10 | 72 | 363 | 82 | 395 | 1.77e-42 | 160 |
| Msa0726090 | AT2G44500.2 | 34.733 | 262 | 147 | 6 | 67 | 310 | 150 | 405 | 5.91e-36 | 138 |
Find 124 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAGATTCTGCCGCTTTA+TGG | 0.087587 | 5_1:-26491944 | Msa0726090:intron |
| ACTCCTCAAATTGAGAATTT+AGG | 0.103676 | 5_1:-26491809 | Msa0726090:CDS |
| TGGCATTCACATTTCATTTC+TGG | 0.140172 | 5_1:-26494322 | Msa0726090:CDS |
| CTCCTCAAATTGAGAATTTA+GGG | 0.207048 | 5_1:-26491808 | Msa0726090:CDS |
| ATTGCAGCTGGTGAGATTTA+TGG | 0.210044 | 5_1:-26490814 | Msa0726090:CDS |
| ATTCGCTTCAAATTAAATTC+TGG | 0.238823 | 5_1:-26494634 | Msa0726090:five_prime_UTR |
| AGCTTGATAAGACATCATTT+TGG | 0.262663 | 5_1:-26493233 | Msa0726090:CDS |
| TTTGCAATTTCAGGTGAAAA+AGG | 0.267125 | 5_1:-26490559 | Msa0726090:intron |
| CCTACAAAATTCTTGTATAA+TGG | 0.268435 | 5_1:+26489906 | None:intergenic |
| AGGGTATACGTTTGAGGTTT+TGG | 0.275369 | 5_1:-26494414 | Msa0726090:CDS |
| GTTCTTCGAGCCTTAGGTTT+TGG | 0.287595 | 5_1:-26490856 | Msa0726090:CDS |
| GGATGCAAAGAAATAGAGTT+TGG | 0.295265 | 5_1:+26489927 | None:intergenic |
| GGCATTCACATTTCATTTCT+GGG | 0.303223 | 5_1:-26494321 | Msa0726090:CDS |
| CGCCCTAAATTCTCAATTTG+AGG | 0.307590 | 5_1:+26491806 | None:intergenic |
| TATTGTTCTTTGGATTTGTT+TGG | 0.312689 | 5_1:-26494371 | Msa0726090:CDS |
| AGAACTAAGGCCGCCTCTTC+TGG | 0.312939 | 5_1:+26490874 | None:intergenic |
| TGTGTTCAAGTATTGTTCTT+TGG | 0.316418 | 5_1:-26494381 | Msa0726090:CDS |
| TTCGCTTCAAATTAAATTCT+GGG | 0.322597 | 5_1:-26494633 | Msa0726090:five_prime_UTR |
| ATCATAATGGAACCCTAAAA+TGG | 0.324135 | 5_1:-26490154 | Msa0726090:CDS |
| CCATCTGCGATGAGTGATTC+TGG | 0.327493 | 5_1:+26490502 | None:intergenic |
| AGAAATTGTGATGAGTTTCT+AGG | 0.340861 | 5_1:-26489996 | Msa0726090:CDS |
| CAAGTTCATGAGAAGAGAAT+TGG | 0.350119 | 5_1:-26490107 | Msa0726090:CDS |
| CTTTCATTGGACCAGCTAAC+AGG | 0.361116 | 5_1:+26492986 | None:intergenic |
| TAGAAATAGTCCTCCTCCTT+TGG | 0.381323 | 5_1:+26490050 | None:intergenic |
| ACCTTTATCCCTACTTATGA+TGG | 0.388352 | 5_1:-26490444 | Msa0726090:CDS |
| AGCTAACAGGAGGCATCTCC+AGG | 0.388940 | 5_1:+26492999 | None:intergenic |
| CTCCAAGTAATATCTTTCAT+TGG | 0.409045 | 5_1:+26492973 | None:intergenic |
| GCCTTAGTTCTTCGAGCCTT+AGG | 0.411617 | 5_1:-26490862 | Msa0726090:CDS |
| TGTTGACAAACTCACAAGTT+GGG | 0.416079 | 5_1:+26490753 | None:intergenic |
| ATGGACATGTTGGCTTTCTC+AGG | 0.416770 | 5_1:-26491722 | Msa0726090:CDS |
| CCTAAAATGGCACGAGTTTG+CGG | 0.417592 | 5_1:-26490141 | Msa0726090:CDS |
| CTCATCGCAGATGGCCGCCT+TGG | 0.420168 | 5_1:-26490493 | Msa0726090:CDS |
| GGCTTTCTCAGGTTGTACTC+AGG | 0.430358 | 5_1:-26491711 | Msa0726090:CDS |
| TTCATTTCTGGGATTACTAC+TGG | 0.431994 | 5_1:-26494310 | Msa0726090:CDS |
| GATGCAAAGAAATAGAGTTT+GGG | 0.433046 | 5_1:+26489928 | None:intergenic |
| CTAAGAGTTTCTTGCAATGG+TGG | 0.441440 | 5_1:-26493414 | Msa0726090:CDS |
| GAGGCAATGAGGATAAGAAA+TGG | 0.442208 | 5_1:-26494449 | Msa0726090:exon |
| CCCATCATAAGTAGGGATAA+AGG | 0.444424 | 5_1:+26490443 | None:intergenic |
| GATCAGAGGGTATACGTTTG+AGG | 0.452447 | 5_1:-26494420 | Msa0726090:CDS |
| TCACCAGCTGCAATATATAT+CGG | 0.453493 | 5_1:+26490823 | None:intergenic |
| ATTTAGGGCGAAAATTGATT+CGG | 0.453678 | 5_1:-26491793 | Msa0726090:CDS |
| GAAATAAAAGAATGTAGTTA+CGG | 0.455310 | 5_1:+26494746 | None:intergenic |
| TAGTGACAGTGAGTGAACTA+TGG | 0.456536 | 5_1:-26494342 | Msa0726090:CDS |
| TGGAGATGCCTCCTGTTAGC+TGG | 0.458292 | 5_1:-26492997 | Msa0726090:CDS |
| TTTCTAAGAGTTTCTTGCAA+TGG | 0.464890 | 5_1:-26493417 | Msa0726090:CDS |
| GCTTTCTCAGGTTGTACTCA+GGG | 0.467938 | 5_1:-26491710 | Msa0726090:CDS |
| CTTGGAGGAAGAAAAGTAAT+CGG | 0.481816 | 5_1:+26494223 | None:intergenic |
| TTGGTTGATATGCATCATAA+TGG | 0.483990 | 5_1:-26490167 | Msa0726090:CDS |
| AGAAATGGAGGTTAGATCAG+AGG | 0.484479 | 5_1:-26494434 | Msa0726090:exon |
| TAATTAATAAAGGTAAATGA+AGG | 0.486861 | 5_1:+26489812 | None:intergenic |
| ACCTAAGGCTCGAAGAACTA+AGG | 0.487906 | 5_1:+26490861 | None:intergenic |
| AATTCAGGTATGCATTCCCT+TGG | 0.488348 | 5_1:-26490957 | Msa0726090:intron |
| TCAGGTATGCATTCCCTTGG+TGG | 0.491881 | 5_1:-26490954 | Msa0726090:intron |
| CTAAGATGCAGTGCCACAAA+AGG | 0.492255 | 5_1:+26491752 | None:intergenic |
| GTCCAATGAAAGATATTACT+TGG | 0.492504 | 5_1:-26492975 | Msa0726090:CDS |
| ACAGGAAATTATACAAGTAA+TGG | 0.492528 | 5_1:-26493441 | Msa0726090:intron |
| GCCATGTTCCCATCATAAGT+AGG | 0.492805 | 5_1:+26490435 | None:intergenic |
| AATGATGTCTTATCAAGCTC+TGG | 0.501078 | 5_1:+26493237 | None:intergenic |
| AGGAGATAATTTCTGAAGAG+AGG | 0.503455 | 5_1:-26490924 | Msa0726090:CDS |
| TAGATATGAGATGGACATGT+TGG | 0.506081 | 5_1:-26491732 | Msa0726090:CDS |
| CCATGTTCCCATCATAAGTA+GGG | 0.511468 | 5_1:+26490436 | None:intergenic |
| CTTCAAATTAAATTCTGGGT+CGG | 0.511953 | 5_1:-26494629 | Msa0726090:five_prime_UTR |
| GAAATGGAGGTTAGATCAGA+GGG | 0.517232 | 5_1:-26494433 | Msa0726090:CDS |
| ATTCCCTTGGTGGAGAGAAA+AGG | 0.524582 | 5_1:-26490944 | Msa0726090:CDS |
| TAATTTGAAGCGAATTAATG+TGG | 0.527626 | 5_1:+26494642 | None:intergenic |
| GCCGCCTCTTCTGGTGTCAA+AGG | 0.536521 | 5_1:+26490883 | None:intergenic |
| GATTCGGATGCTTCACGAGA+AGG | 0.536968 | 5_1:-26491777 | Msa0726090:CDS |
| CCTTTATCCCTACTTATGAT+GGG | 0.537062 | 5_1:-26490443 | Msa0726090:CDS |
| AGTAGGGATAAAGGTGTCAC+TGG | 0.538681 | 5_1:+26490452 | None:intergenic |
| TACGGAGAAAGATTGAGAGA+AGG | 0.540208 | 5_1:+26494764 | None:intergenic |
| TTCTGAAGAGAGGAGATCAC+AGG | 0.544928 | 5_1:-26490914 | Msa0726090:CDS |
| TGAAAGATATTACTTGGAGC+AGG | 0.549066 | 5_1:-26492969 | Msa0726090:intron |
| CCCTACTTATGATGGGAACA+TGG | 0.557915 | 5_1:-26490436 | Msa0726090:CDS |
| CTGAGTTTCTGTAGATCAAG+TGG | 0.559172 | 5_1:+26491863 | None:intergenic |
| ACCTTGTGCTTTCCATAAAG+CGG | 0.559211 | 5_1:+26491932 | None:intergenic |
| AGAGAAGGAGAAGAAGAAAG+AGG | 0.560418 | 5_1:+26494779 | None:intergenic |
| ATTCGGATGCTTCACGAGAA+GGG | 0.561013 | 5_1:-26491776 | Msa0726090:CDS |
| CCGAGGAACTCAAAAGATTG+AGG | 0.570538 | 5_1:-26491670 | Msa0726090:intron |
| AATTTGAAGCGAATTAATGT+GGG | 0.574222 | 5_1:+26494643 | None:intergenic |
| CCAGAATCACTCATCGCAGA+TGG | 0.574783 | 5_1:-26490502 | Msa0726090:CDS |
| TGGGAACATGGCAAAACTTG+TGG | 0.580054 | 5_1:-26490424 | Msa0726090:CDS |
| CACTTGATCTACAGAAACTC+AGG | 0.581030 | 5_1:-26491862 | Msa0726090:CDS |
| TACTGAAACCATAAAATCCA+AGG | 0.582440 | 5_1:+26490476 | None:intergenic |
| ACACCGATATATATTGCAGC+TGG | 0.586158 | 5_1:-26490826 | Msa0726090:CDS |
| TCCTTTGACACCAGAAGAGG+CGG | 0.587100 | 5_1:-26490884 | Msa0726090:CDS |
| GACGCACGTCTAGCAAATAA+CGG | 0.591633 | 5_1:-26491890 | Msa0726090:CDS |
| AGAGAATTGGACAGCCAACT+CGG | 0.593176 | 5_1:-26490094 | Msa0726090:CDS |
| AATTAATAAAGGTAAATGAA+GGG | 0.593666 | 5_1:+26489813 | None:intergenic |
| CAAGTATAGTATGAGTTGAG+AGG | 0.595061 | 5_1:-26489957 | Msa0726090:exon |
| GCATATTCTGCAAGCCTCAG+TGG | 0.596243 | 5_1:+26489835 | None:intergenic |
| GCAATGAGGATAAGAAATGG+AGG | 0.598407 | 5_1:-26494446 | Msa0726090:exon |
| TGTCTCCCTACCAAAACCTA+AGG | 0.604346 | 5_1:+26490846 | None:intergenic |
| AGATTTATGGCGGTGAACGT+AGG | 0.606142 | 5_1:-26490801 | Msa0726090:CDS |
| TATAATCGACAGACCAAAGG+AGG | 0.606405 | 5_1:-26490063 | Msa0726090:CDS |
| TCCTAAACAAAATAATGTCG+TGG | 0.607462 | 5_1:-26494260 | Msa0726090:CDS |
| AACTTGTGGAAGGCCATCGA+AGG | 0.608718 | 5_1:-26490410 | Msa0726090:intron |
| AACATGGCAAAACTTGTGGA+AGG | 0.609196 | 5_1:-26490420 | Msa0726090:CDS |
| ACATAGACACTCATGAGGGT+TGG | 0.613452 | 5_1:+26490025 | None:intergenic |
| GTTGACAAACTCACAAGTTG+GGG | 0.614088 | 5_1:+26490754 | None:intergenic |
| AAATGGCACGAGTTTGCGGA+TGG | 0.616122 | 5_1:-26490137 | Msa0726090:CDS |
| ATGTCCTTTGACACCAGAAG+AGG | 0.616187 | 5_1:-26490887 | Msa0726090:CDS |
| TTGCTCAGAGAAAGAAGCCG+AGG | 0.622924 | 5_1:-26491687 | Msa0726090:CDS |
| GGAAGAAAAGTAATCGGAGG+CGG | 0.623913 | 5_1:+26494229 | None:intergenic |
| CTTGAATCAAATGCGTGCTG+CGG | 0.623967 | 5_1:-26493391 | Msa0726090:intron |
| AGTTATAATCGACAGACCAA+AGG | 0.626511 | 5_1:-26490066 | Msa0726090:CDS |
| CCCTCATGAGTGTCTATGTG+AGG | 0.627232 | 5_1:-26490021 | Msa0726090:CDS |
| ACTGCATCTTAGATATGAGA+TGG | 0.633287 | 5_1:-26491741 | Msa0726090:CDS |
| GGGTAAATACATACCTTCGA+TGG | 0.636072 | 5_1:+26490397 | None:intergenic |
| AATCGACAGACCAAAGGAGG+AGG | 0.642909 | 5_1:-26490060 | Msa0726090:CDS |
| TAAATATGGATATTCTACCC+TGG | 0.644817 | 5_1:-26493017 | Msa0726090:CDS |
| GCCGCTTTATGGAAAGCACA+AGG | 0.648292 | 5_1:-26491933 | Msa0726090:CDS |
| GTTTCAATGAAGAGGCAATG+AGG | 0.648573 | 5_1:-26494460 | Msa0726090:five_prime_UTR |
| AGGAAATATTTGTTCCACTG+AGG | 0.653180 | 5_1:-26489849 | Msa0726090:three_prime_UTR |
| TGAGTTTCTGTAGATCAAGT+GGG | 0.659206 | 5_1:+26491864 | None:intergenic |
| TCATTGGACCAGCTAACAGG+AGG | 0.662833 | 5_1:+26492989 | None:intergenic |
| TCCTCACATAGACACTCATG+AGG | 0.668777 | 5_1:+26490020 | None:intergenic |
| CCTCACATAGACACTCATGA+GGG | 0.677969 | 5_1:+26490021 | None:intergenic |
| GCTAACAGGAGGCATCTCCA+GGG | 0.682429 | 5_1:+26493000 | None:intergenic |
| CAGGTGTCGTGTCAATTACG+AGG | 0.683646 | 5_1:-26491843 | Msa0726090:CDS |
| TCTGAAGAGAGGAGATCACA+GGG | 0.690255 | 5_1:-26490913 | Msa0726090:CDS |
| GGAGGAAGAAAAGTAATCGG+AGG | 0.701615 | 5_1:+26494226 | None:intergenic |
| GCAGCTGGTGAGATTTATGG+CGG | 0.732613 | 5_1:-26490811 | Msa0726090:CDS |
| GGTATTTCAGATATGTGACA+TGG | 0.740956 | 5_1:-26493298 | Msa0726090:intron |
| TGAAACCATAAAATCCAAGG+CGG | 0.765862 | 5_1:+26490479 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTATTTAGAGATATTA+AGG | - | chr5_1:26493261-26493280 | Msa0726090:CDS | 10.0% |
| !! | GATCAATTAATTTATATCAA+AGG | + | chr5_1:26490585-26490604 | None:intergenic | 15.0% |
| !!! | GTTGGTAAATTTTATTTTTT+TGG | - | chr5_1:26490708-26490727 | Msa0726090:intron | 15.0% |
| !! | ATAAATCAATGTTCAATAAA+AGG | - | chr5_1:26490979-26490998 | Msa0726090:intron | 15.0% |
| !! | TAAATCAATGTTCAATAAAA+GGG | - | chr5_1:26490980-26490999 | Msa0726090:intron | 15.0% |
| !! | ATTGAAAAATTAACAATTTG+GGG | + | chr5_1:26491894-26491913 | None:intergenic | 15.0% |
| !! | CATTGAAAAATTAACAATTT+GGG | + | chr5_1:26491895-26491914 | None:intergenic | 15.0% |
| !! | TGGAATAAAATAGAATTATA+GGG | - | chr5_1:26492068-26492087 | Msa0726090:intron | 15.0% |
| !! | AAGGGAAAAAAAAAAAAAAA+AGG | + | chr5_1:26492305-26492324 | None:intergenic | 15.0% |
| !! | ATGAAGAAATTTATAGTTAT+GGG | - | chr5_1:26492538-26492557 | Msa0726090:intron | 15.0% |
| !! | AAATATCATTTACTAATATG+AGG | + | chr5_1:26493177-26493196 | None:intergenic | 15.0% |
| !! | AATACTAAAAACACAATAAA+TGG | + | chr5_1:26493511-26493530 | None:intergenic | 15.0% |
| !! | AATTAATAAAGGTAAATGAA+GGG | + | chr5_1:26494897-26494916 | None:intergenic | 15.0% |
| !! | TAATTAATAAAGGTAAATGA+AGG | + | chr5_1:26494898-26494917 | None:intergenic | 15.0% |
| !!! | TGGTTTCTTTTTTTTTTTTC+CGG | + | chr5_1:26489852-26489871 | None:intergenic | 20.0% |
| !!! | GTATAATGCAATTTTCTTTT+TGG | + | chr5_1:26489872-26489891 | None:intergenic | 20.0% |
| !! | GAAATAAAAGAATGTAGTTA+CGG | + | chr5_1:26489964-26489983 | None:intergenic | 20.0% |
| !! | TTTCAAGAATTGAGAAAAAA+GGG | + | chr5_1:26489999-26490018 | None:intergenic | 20.0% |
| !!! | TTTTCAAGAATTGAGAAAAA+AGG | + | chr5_1:26490000-26490019 | None:intergenic | 20.0% |
| !!! | TGCTCAAAATCAAATTTTTT+TGG | + | chr5_1:26490041-26490060 | None:intergenic | 20.0% |
| !! | AAAACATATCTGATACAAAA+AGG | + | chr5_1:26490535-26490554 | None:intergenic | 20.0% |
| !!! | TTTTATTTTCTCACTCATTT+TGG | - | chr5_1:26491212-26491231 | Msa0726090:intron | 20.0% |
| !!! | TATTTACTGCTAAACTTTTT+AGG | + | chr5_1:26491676-26491695 | None:intergenic | 20.0% |
| !! | AAAAAGTTTAGCAGTAAATA+TGG | - | chr5_1:26491676-26491695 | Msa0726090:CDS | 20.0% |
| !!! | TTCTAACTATTTGCATTTTA+AGG | - | chr5_1:26491809-26491828 | Msa0726090:CDS | 20.0% |
| !! | GCATTGAAAAATTAACAATT+TGG | + | chr5_1:26491896-26491915 | None:intergenic | 20.0% |
| !! | GTGGAATAAAATAGAATTAT+AGG | - | chr5_1:26492067-26492086 | Msa0726090:intron | 20.0% |
| !! | AGTCAATTATATGTTTGAAA+GGG | + | chr5_1:26492323-26492342 | None:intergenic | 20.0% |
| !! | AAGTCAATTATATGTTTGAA+AGG | + | chr5_1:26492324-26492343 | None:intergenic | 20.0% |
| !! | CATGAAGAAATTTATAGTTA+TGG | - | chr5_1:26492537-26492556 | Msa0726090:intron | 20.0% |
| !! | AAAAACCAAGTTTACTAAAT+AGG | + | chr5_1:26492584-26492603 | None:intergenic | 20.0% |
| !!! | AAACTAAAATAAGTTGCTTT+TGG | - | chr5_1:26492606-26492625 | Msa0726090:intron | 20.0% |
| !!! | GTATTTTTATGTTTCATGTT+TGG | - | chr5_1:26493059-26493078 | Msa0726090:CDS | 20.0% |
| !! | GCATATAATCAAGTAAATAA+GGG | + | chr5_1:26493616-26493635 | None:intergenic | 20.0% |
| !! | AGCATATAATCAAGTAAATA+AGG | + | chr5_1:26493617-26493636 | None:intergenic | 20.0% |
| !!! | CAAGATTGTTTTTCTAAAAT+CGG | + | chr5_1:26494496-26494515 | None:intergenic | 20.0% |
| !!! | TTTTAGAAAAACAATCTTGT+TGG | - | chr5_1:26494497-26494516 | Msa0726090:intron | 20.0% |
| !!! | AATTTTGTGTCTTTTTCGAT+TGG | + | chr5_1:26489826-26489845 | None:intergenic | 25.0% |
| !! | AAAAAGACACAAAATTTTCC+CGG | - | chr5_1:26489830-26489849 | Msa0726090:three_prime_UTR | 25.0% |
| !!! | GGTTTCTTTTTTTTTTTTCC+GGG | + | chr5_1:26489851-26489870 | None:intergenic | 25.0% |
| ! | TTCAAGAATTGAGAAAAAAG+GGG | + | chr5_1:26489998-26490017 | None:intergenic | 25.0% |
| !! | AATTTGAAGCGAATTAATGT+GGG | + | chr5_1:26490067-26490086 | None:intergenic | 25.0% |
| !! | TAATTTGAAGCGAATTAATG+TGG | + | chr5_1:26490068-26490087 | None:intergenic | 25.0% |
| ! | ATTCGCTTCAAATTAAATTC+TGG | - | chr5_1:26490073-26490092 | Msa0726090:CDS | 25.0% |
| ! | TTCGCTTCAAATTAAATTCT+GGG | - | chr5_1:26490074-26490093 | Msa0726090:CDS | 25.0% |
| !!! | AATTTTCATTTTTGTGTCAG+AGG | - | chr5_1:26490115-26490134 | Msa0726090:CDS | 25.0% |
| ! | GTGTTTATGTGATACTAATT+TGG | - | chr5_1:26490199-26490218 | Msa0726090:CDS | 25.0% |
| !!! | TTTGGTTTTTTGTTATGTGA+AGG | - | chr5_1:26490217-26490236 | Msa0726090:CDS | 25.0% |
| !!! | TTTGTTATGTGAAGGTTTTA+AGG | - | chr5_1:26490225-26490244 | Msa0726090:intron | 25.0% |
| !! | TATTGTTCTTTGGATTTGTT+TGG | - | chr5_1:26490336-26490355 | Msa0726090:intron | 25.0% |
| ! | AGTGTAAATTGTATTTGTGT+TGG | - | chr5_1:26490690-26490709 | Msa0726090:intron | 25.0% |
| !!! | CTTGTTTTAATGTTGAATTG+TGG | - | chr5_1:26490738-26490757 | Msa0726090:intron | 25.0% |
| ! | TTTCAAATTATAATAACCCC+AGG | + | chr5_1:26490840-26490859 | None:intergenic | 25.0% |
| !!! | TAATTTGAAATGCTGATTCT+AGG | - | chr5_1:26490850-26490869 | Msa0726090:CDS | 25.0% |
| !!! | AATTTGAAATGCTGATTCTA+GGG | - | chr5_1:26490851-26490870 | Msa0726090:CDS | 25.0% |
| ! | GAGATGTACCTTATTAAAAA+GGG | + | chr5_1:26491019-26491038 | None:intergenic | 25.0% |
| ! | TGAGATGTACCTTATTAAAA+AGG | + | chr5_1:26491020-26491039 | None:intergenic | 25.0% |
| !! | TTTTTAATAAGGTACATCTC+AGG | - | chr5_1:26491019-26491038 | Msa0726090:intron | 25.0% |
| ! | ATACCTATCCTCAAAATTAA+TGG | + | chr5_1:26491119-26491138 | None:intergenic | 25.0% |
| !!! | TTAATTTTGAGGATAGGTAT+AGG | - | chr5_1:26491119-26491138 | Msa0726090:intron | 25.0% |
| ! | TTACTTGTATAATTTCCTGT+AGG | + | chr5_1:26491266-26491285 | None:intergenic | 25.0% |
| ! | ACAGGAAATTATACAAGTAA+TGG | - | chr5_1:26491266-26491285 | Msa0726090:intron | 25.0% |
| ! | AAGCTTAAATACTCATTTAG+TGG | - | chr5_1:26491383-26491402 | Msa0726090:intron | 25.0% |
| !!! | TACACAACTTTAGAATGATA+TGG | + | chr5_1:26491562-26491581 | None:intergenic | 25.0% |
| !! | TTCTTTTTGCAGTAATTTTG+AGG | - | chr5_1:26491585-26491604 | Msa0726090:intron | 25.0% |
| !! | TGATTCTTGACCTATATTTT+TGG | - | chr5_1:26491855-26491874 | Msa0726090:CDS | 25.0% |
| !!! | ACCTATATTTTTGGATAGTA+TGG | - | chr5_1:26491864-26491883 | Msa0726090:CDS | 25.0% |
| !! | CAGTTTTCTAATAAGACAAT+AGG | + | chr5_1:26492144-26492163 | None:intergenic | 25.0% |
| ! | AATAGGTCATGTTCTTTAAA+AGG | + | chr5_1:26492210-26492229 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGGCTTACATATA+TGG | + | chr5_1:26492235-26492254 | None:intergenic | 25.0% |
| !!! | AACATGGCTTATATTTTGAA+AGG | + | chr5_1:26492248-26492267 | None:intergenic | 25.0% |
| ! | ATGTTGCAGACAAATAAAAA+GGG | + | chr5_1:26492281-26492300 | None:intergenic | 25.0% |
| ! | AAAATCAGTGTTATCAATAG+TGG | + | chr5_1:26492439-26492458 | None:intergenic | 25.0% |
| !!! | ACTGATTTTCAAAGAAGTTA+TGG | - | chr5_1:26492450-26492469 | Msa0726090:intron | 25.0% |
| !! | CTGATTTTCAAAGAAGTTAT+GGG | - | chr5_1:26492451-26492470 | Msa0726090:intron | 25.0% |
| !! | GTTTTCCTATTTAGTAAACT+TGG | - | chr5_1:26492576-26492595 | Msa0726090:intron | 25.0% |
| !!! | CTGTTTTTATTTTCCTTCTA+CGG | - | chr5_1:26493309-26493328 | Msa0726090:intron | 25.0% |
| ! | AAGTCTATGAAAACAAGAAA+TGG | + | chr5_1:26493368-26493387 | None:intergenic | 25.0% |
| !! | TATTAAAGCCCTTTTACTTT+TGG | - | chr5_1:26493431-26493450 | Msa0726090:CDS | 25.0% |
| !!! | ATTAAAGCCCTTTTACTTTT+GGG | - | chr5_1:26493432-26493451 | Msa0726090:CDS | 25.0% |
| !! | TATTGTGATTTAAGATTCTG+TGG | - | chr5_1:26493646-26493665 | Msa0726090:intron | 25.0% |
| ! | TAGATATCTAATTGCTGTAA+GGG | + | chr5_1:26493674-26493693 | None:intergenic | 25.0% |
| ! | ATAGATATCTAATTGCTGTA+AGG | + | chr5_1:26493675-26493694 | None:intergenic | 25.0% |
| ! | AATTTCAAAGACTGAAAATG+AGG | + | chr5_1:26494098-26494117 | None:intergenic | 25.0% |
| ! | CCTACAAAATTCTTGTATAA+TGG | + | chr5_1:26494804-26494823 | None:intergenic | 25.0% |
| !! | CCATTATACAAGAATTTTGT+AGG | - | chr5_1:26494801-26494820 | Msa0726090:five_prime_UTR | 25.0% |
| !! | GAAAAAAGTGTAAAAAAGAG+AGG | - | chr5_1:26494838-26494857 | Msa0726090:five_prime_UTR | 25.0% |
| CTTCAAATTAAATTCTGGGT+CGG | - | chr5_1:26490078-26490097 | Msa0726090:CDS | 30.0% | |
| !!! | GTTTTAAGGTTTCAATGAAG+AGG | - | chr5_1:26490239-26490258 | Msa0726090:intron | 30.0% |
| ! | TGTGTTCAAGTATTGTTCTT+TGG | - | chr5_1:26490326-26490345 | Msa0726090:intron | 30.0% |
| TCCTAAACAAAATAATGTCG+TGG | - | chr5_1:26490447-26490466 | Msa0726090:CDS | 30.0% | |
| !! | ACCACGACATTATTTTGTTT+AGG | + | chr5_1:26490451-26490470 | None:intergenic | 30.0% |
| TTAGAGTCAAGAAACTAACT+TGG | + | chr5_1:26490505-26490524 | None:intergenic | 30.0% | |
| !! | GCTTTTGTGTATTGTTGATT+AGG | - | chr5_1:26490611-26490630 | Msa0726090:intron | 30.0% |
| ! | GGTGTTATGTGACTTATATT+AGG | - | chr5_1:26490632-26490651 | Msa0726090:intron | 30.0% |
| GACTTATATTAGGTGTTAGA+TGG | - | chr5_1:26490642-26490661 | Msa0726090:intron | 30.0% | |
| ! | TGTTAAGTGTTGTTCTATAG+TGG | - | chr5_1:26490801-26490820 | Msa0726090:CDS | 30.0% |
| ! | CTTATTAAAAAGGGCATATC+CGG | + | chr5_1:26491010-26491029 | None:intergenic | 30.0% |
| !! | AAGTGTTGCCATTAATTTTG+AGG | - | chr5_1:26491108-26491127 | Msa0726090:intron | 30.0% |
| !! | TTGCCATTAATTTTGAGGAT+AGG | - | chr5_1:26491113-26491132 | Msa0726090:intron | 30.0% |
| CAATATTGCTTATCGATGAA+TGG | - | chr5_1:26491150-26491169 | Msa0726090:intron | 30.0% | |
| ! | TTTCTAAGAGTTTCTTGCAA+TGG | - | chr5_1:26491290-26491309 | Msa0726090:intron | 30.0% |
| TAAATACTCATTTAGTGGCA+TGG | - | chr5_1:26491388-26491407 | Msa0726090:intron | 30.0% | |
| ! | AGCTTGATAAGACATCATTT+TGG | - | chr5_1:26491474-26491493 | Msa0726090:intron | 30.0% |
| ! | GCTTGATAAGACATCATTTT+GGG | - | chr5_1:26491475-26491494 | Msa0726090:intron | 30.0% |
| CAGAACAAAGTATATACCTA+GGG | + | chr5_1:26491505-26491524 | None:intergenic | 30.0% | |
| TCAGAACAAAGTATATACCT+AGG | + | chr5_1:26491506-26491525 | None:intergenic | 30.0% | |
| TGATATGGAGGTTAAATTAG+AGG | + | chr5_1:26491547-26491566 | None:intergenic | 30.0% | |
| !! | ACAACTTTAGAATGATATGG+AGG | + | chr5_1:26491559-26491578 | None:intergenic | 30.0% |
| TAAATATGGATATTCTACCC+TGG | - | chr5_1:26491690-26491709 | Msa0726090:CDS | 30.0% | |
| GTCCAATGAAAGATATTACT+TGG | - | chr5_1:26491732-26491751 | Msa0726090:CDS | 30.0% | |
| CTCCAAGTAATATCTTTCAT+TGG | + | chr5_1:26491737-26491756 | None:intergenic | 30.0% | |
| GCCATACTATCCAAAAATAT+AGG | + | chr5_1:26491868-26491887 | None:intergenic | 30.0% | |
| CTATCCTAGTTTCGTTATTA+GGG | - | chr5_1:26491996-26492015 | Msa0726090:intron | 30.0% | |
| ATAAGACAATAGGTCATGTT+TGG | + | chr5_1:26492134-26492153 | None:intergenic | 30.0% | |
| CATGTTGCAGACAAATAAAA+AGG | + | chr5_1:26492282-26492301 | None:intergenic | 30.0% | |
| GAAATACAAGATAGCATTGT+GGG | + | chr5_1:26492378-26492397 | None:intergenic | 30.0% | |
| TGAAATACAAGATAGCATTG+TGG | + | chr5_1:26492379-26492398 | None:intergenic | 30.0% | |
| CTATCTTGTATTTCACATAG+CGG | - | chr5_1:26492384-26492403 | Msa0726090:intron | 30.0% | |
| !!! | TATTTCACATAGCGGATTTT+TGG | - | chr5_1:26492392-26492411 | Msa0726090:intron | 30.0% |
| !! | TAGTGGATTGCAGAAAATAA+AGG | + | chr5_1:26492422-26492441 | None:intergenic | 30.0% |
| !! | TTCTAAAGTTCCAATCAAGT+TGG | + | chr5_1:26492493-26492512 | None:intergenic | 30.0% |
| !!! | AAATAAGTTGCTTTTGGTGT+AGG | - | chr5_1:26492612-26492631 | Msa0726090:intron | 30.0% |
| ACTCCTCAAATTGAGAATTT+AGG | - | chr5_1:26492898-26492917 | Msa0726090:intron | 30.0% | |
| CTCCTCAAATTGAGAATTTA+GGG | - | chr5_1:26492899-26492918 | Msa0726090:intron | 30.0% | |
| ! | ATTTAGGGCGAAAATTGATT+CGG | - | chr5_1:26492914-26492933 | Msa0726090:intron | 30.0% |
| TTCTGTAATTGAGGATAAGA+GGG | - | chr5_1:26493113-26493132 | Msa0726090:CDS | 30.0% | |
| AACGTTTCCCAAAAGTAAAA+GGG | + | chr5_1:26493442-26493461 | None:intergenic | 30.0% | |
| AAACGTTTCCCAAAAGTAAA+AGG | + | chr5_1:26493443-26493462 | None:intergenic | 30.0% | |
| ! | GGTGGATTTGTAATTCAAAA+AGG | - | chr5_1:26493546-26493565 | Msa0726090:intron | 30.0% |
| GCATACCTGAATTACAAAAA+GGG | + | chr5_1:26493743-26493762 | None:intergenic | 30.0% | |
| TGCATACCTGAATTACAAAA+AGG | + | chr5_1:26493744-26493763 | None:intergenic | 30.0% | |
| ! | TTTGCAATTTCAGGTGAAAA+AGG | - | chr5_1:26494148-26494167 | Msa0726090:intron | 30.0% |
| TACTGAAACCATAAAATCCA+AGG | + | chr5_1:26494234-26494253 | None:intergenic | 30.0% | |
| AATAACATGTCAGCAACATT+CGG | + | chr5_1:26494334-26494353 | None:intergenic | 30.0% | |
| AATCTTGTTGGATCGAAAAA+AGG | - | chr5_1:26494509-26494528 | Msa0726090:intron | 30.0% | |
| ! | TTGGTTGATATGCATCATAA+TGG | - | chr5_1:26494540-26494559 | Msa0726090:intron | 30.0% |
| ! | ATCATAATGGAACCCTAAAA+TGG | - | chr5_1:26494553-26494572 | Msa0726090:intron | 30.0% |
| AGAAATTGTGATGAGTTTCT+AGG | - | chr5_1:26494711-26494730 | Msa0726090:five_prime_UTR | 30.0% | |
| GATGCAAAGAAATAGAGTTT+GGG | + | chr5_1:26494782-26494801 | None:intergenic | 30.0% | |
| ! | AAGAATTTTGTAGGAAACCA+GGG | - | chr5_1:26494810-26494829 | Msa0726090:five_prime_UTR | 30.0% |
| !! | TTCATTTTTGTGTCAGAGGT+AGG | - | chr5_1:26490119-26490138 | Msa0726090:CDS | 35.0% |
| !! | TCATTTTTGTGTCAGAGGTA+GGG | - | chr5_1:26490120-26490139 | Msa0726090:CDS | 35.0% |
| TGGCATTCACATTTCATTTC+TGG | - | chr5_1:26490385-26490404 | Msa0726090:intron | 35.0% | |
| GGCATTCACATTTCATTTCT+GGG | - | chr5_1:26490386-26490405 | Msa0726090:intron | 35.0% | |
| !! | TTCATTTCTGGGATTACTAC+TGG | - | chr5_1:26490397-26490416 | Msa0726090:intron | 35.0% |
| CTTGGAGGAAGAAAAGTAAT+CGG | + | chr5_1:26490487-26490506 | None:intergenic | 35.0% | |
| ! | TTGTGGATTGTGAAATCTGT+TGG | - | chr5_1:26490755-26490774 | Msa0726090:intron | 35.0% |
| ! | TGTGGATTGTGAAATCTGTT+GGG | - | chr5_1:26490756-26490775 | Msa0726090:intron | 35.0% |
| !!! | AGTGGTTTTTGAAATTGTCC+TGG | - | chr5_1:26490819-26490838 | Msa0726090:CDS | 35.0% |
| !!! | GTGGTTTTTGAAATTGTCCT+GGG | - | chr5_1:26490820-26490839 | Msa0726090:CDS | 35.0% |
| !!! | TGGTTTTTGAAATTGTCCTG+GGG | - | chr5_1:26490821-26490840 | Msa0726090:CDS | 35.0% |
| TGTTCAATAAAAGGGATCTC+CGG | - | chr5_1:26490988-26491007 | Msa0726090:intron | 35.0% | |
| ! | CGGATATGCCCTTTTTAATA+AGG | - | chr5_1:26491008-26491027 | Msa0726090:intron | 35.0% |
| !! | TTATCGATGAATGGTTCTGA+TGG | - | chr5_1:26491159-26491178 | Msa0726090:intron | 35.0% |
| ATAATTTCCTGTAGGTTGTC+AGG | + | chr5_1:26491258-26491277 | None:intergenic | 35.0% | |
| GGTATTTCAGATATGTGACA+TGG | - | chr5_1:26491409-26491428 | Msa0726090:intron | 35.0% | |
| AATGATGTCTTATCAAGCTC+TGG | + | chr5_1:26491473-26491492 | None:intergenic | 35.0% | |
| TGAAAGATATTACTTGGAGC+AGG | - | chr5_1:26491738-26491757 | Msa0726090:CDS | 35.0% | |
| GCTATCCTAGTTTCGTTATT+AGG | - | chr5_1:26491995-26492014 | Msa0726090:intron | 35.0% | |
| TTGAATCAACTAGCAGAAAC+TGG | + | chr5_1:26492039-26492058 | None:intergenic | 35.0% | |
| ! | GTTTCTGCTAGTTGATTCAA+TGG | - | chr5_1:26492039-26492058 | Msa0726090:intron | 35.0% |
| ! | AGTTGATTCAATGGCAATAG+TGG | - | chr5_1:26492048-26492067 | Msa0726090:intron | 35.0% |
| GGCTTACATATATGGTGAAT+AGG | + | chr5_1:26492227-26492246 | None:intergenic | 35.0% | |
| AAAGGGAATAAAGCAGAACA+TGG | + | chr5_1:26492264-26492283 | None:intergenic | 35.0% | |
| GACTTATTTCAACTGCTATG+CGG | - | chr5_1:26492339-26492358 | Msa0726090:intron | 35.0% | |
| !! | AAGTTCCAATCAAGTTGGAA+AGG | + | chr5_1:26492488-26492507 | None:intergenic | 35.0% |
| !!! | CTACTTTTTGGAACCTATGT+TGG | + | chr5_1:26492642-26492661 | None:intergenic | 35.0% |
| TGAGTTTCTGTAGATCAAGT+GGG | + | chr5_1:26492846-26492865 | None:intergenic | 35.0% | |
| ACTGCATCTTAGATATGAGA+TGG | - | chr5_1:26492966-26492985 | Msa0726090:intron | 35.0% | |
| TAGATATGAGATGGACATGT+TGG | - | chr5_1:26492975-26492994 | Msa0726090:CDS | 35.0% | |
| CATTCTTGCTTCTGTAATTG+AGG | - | chr5_1:26493104-26493123 | Msa0726090:CDS | 35.0% | |
| CTTCTGTAATTGAGGATAAG+AGG | - | chr5_1:26493112-26493131 | Msa0726090:CDS | 35.0% | |
| AATTGAGGATAAGAGGGATT+TGG | - | chr5_1:26493119-26493138 | Msa0726090:intron | 35.0% | |
| TTGTAACGAAAAACCGTAGA+AGG | + | chr5_1:26493325-26493344 | None:intergenic | 35.0% | |
| AGTATTATCTCTTGTACACG+TGG | - | chr5_1:26493525-26493544 | Msa0726090:intron | 35.0% | |
| ! | ACTGTCCCTTTTTGTAATTC+AGG | - | chr5_1:26493735-26493754 | Msa0726090:intron | 35.0% |
| ! | AGGAGATAATTTCTGAAGAG+AGG | - | chr5_1:26493783-26493802 | Msa0726090:intron | 35.0% |
| TCACCAGCTGCAATATATAT+CGG | + | chr5_1:26493887-26493906 | None:intergenic | 35.0% | |
| TGTTGACAAACTCACAAGTT+GGG | + | chr5_1:26493957-26493976 | None:intergenic | 35.0% | |
| ATGTTGACAAACTCACAAGT+TGG | + | chr5_1:26493958-26493977 | None:intergenic | 35.0% | |
| ! | CATTTTTCTGCTCGTTGTTT+GGG | - | chr5_1:26493991-26494010 | Msa0726090:intron | 35.0% |
| ATTGTTCTTGCGCTCATTAA+TGG | - | chr5_1:26494034-26494053 | Msa0726090:intron | 35.0% | |
| GAAAATGCATCTTTCAGATC+AGG | + | chr5_1:26494065-26494084 | None:intergenic | 35.0% | |
| CTTTCTGTGTTTGCAATTTC+AGG | - | chr5_1:26494139-26494158 | Msa0726090:intron | 35.0% | |
| TGAAACCATAAAATCCAAGG+CGG | + | chr5_1:26494231-26494250 | None:intergenic | 35.0% | |
| ACCTTTATCCCTACTTATGA+TGG | - | chr5_1:26494263-26494282 | Msa0726090:CDS | 35.0% | |
| CCTTTATCCCTACTTATGAT+GGG | - | chr5_1:26494264-26494283 | Msa0726090:CDS | 35.0% | |
| ATAACATGTCAGCAACATTC+GGG | + | chr5_1:26494333-26494352 | None:intergenic | 35.0% | |
| TAACAGTGTAAGTGCATTGT+TGG | - | chr5_1:26494423-26494442 | Msa0726090:CDS | 35.0% | |
| !! | TAACTAATTTGTTCGTCTGC+AGG | - | chr5_1:26494466-26494485 | Msa0726090:five_prime_UTR | 35.0% |
| CAAGTTCATGAGAAGAGAAT+TGG | - | chr5_1:26494600-26494619 | Msa0726090:five_prime_UTR | 35.0% | |
| ! | ATTATAACTTTTCGCCGAGT+TGG | + | chr5_1:26494630-26494649 | None:intergenic | 35.0% |
| AGTTATAATCGACAGACCAA+AGG | - | chr5_1:26494641-26494660 | Msa0726090:five_prime_UTR | 35.0% | |
| ! | CAAGTATAGTATGAGTTGAG+AGG | - | chr5_1:26494750-26494769 | Msa0726090:five_prime_UTR | 35.0% |
| GGATGCAAAGAAATAGAGTT+TGG | + | chr5_1:26494783-26494802 | None:intergenic | 35.0% | |
| ! | CAAGAATTTTGTAGGAAACC+AGG | - | chr5_1:26494809-26494828 | Msa0726090:five_prime_UTR | 35.0% |
| AGGAAATATTTGTTCCACTG+AGG | - | chr5_1:26494858-26494877 | Msa0726090:five_prime_UTR | 35.0% | |
| AGAGAAGGAGAAGAAGAAAG+AGG | + | chr5_1:26489931-26489950 | None:intergenic | 40.0% | |
| TACGGAGAAAGATTGAGAGA+AGG | + | chr5_1:26489946-26489965 | None:intergenic | 40.0% | |
| GTTTCAATGAAGAGGCAATG+AGG | - | chr5_1:26490247-26490266 | Msa0726090:intron | 40.0% | |
| GAGGCAATGAGGATAAGAAA+TGG | - | chr5_1:26490258-26490277 | Msa0726090:intron | 40.0% | |
| GCAATGAGGATAAGAAATGG+AGG | - | chr5_1:26490261-26490280 | Msa0726090:intron | 40.0% | |
| AGAAATGGAGGTTAGATCAG+AGG | - | chr5_1:26490273-26490292 | Msa0726090:intron | 40.0% | |
| GAAATGGAGGTTAGATCAGA+GGG | - | chr5_1:26490274-26490293 | Msa0726090:intron | 40.0% | |
| !! | AGGGTATACGTTTGAGGTTT+TGG | - | chr5_1:26490293-26490312 | Msa0726090:intron | 40.0% |
| TAGTGACAGTGAGTGAACTA+TGG | - | chr5_1:26490365-26490384 | Msa0726090:intron | 40.0% | |
| GAGTCAAGAAACTAACTTGG+AGG | + | chr5_1:26490502-26490521 | None:intergenic | 40.0% | |
| !! | GATGAATGGTTCTGATGGAT+AGG | - | chr5_1:26491164-26491183 | Msa0726090:intron | 40.0% |
| CTAAGAGTTTCTTGCAATGG+TGG | - | chr5_1:26491293-26491312 | Msa0726090:intron | 40.0% | |
| ACTGCCCTAATAACGAAACT+AGG | + | chr5_1:26492003-26492022 | None:intergenic | 40.0% | |
| ACTAGCAGAAACTGGAATAG+CGG | + | chr5_1:26492031-26492050 | None:intergenic | 40.0% | |
| ATAGCATTGTGGGCAAATAG+TGG | + | chr5_1:26492368-26492387 | None:intergenic | 40.0% | |
| TGTGTCCTTTCCAACTTGAT+TGG | - | chr5_1:26492480-26492499 | Msa0726090:intron | 40.0% | |
| !!! | CTCAGTGAAGTGCTACTTTT+TGG | + | chr5_1:26492654-26492673 | None:intergenic | 40.0% |
| CAGTGTAGAGTCAATAGTGT+TGG | + | chr5_1:26492746-26492765 | None:intergenic | 40.0% | |
| ACCTTGTGCTTTCCATAAAG+CGG | + | chr5_1:26492778-26492797 | None:intergenic | 40.0% | |
| CTGAGTTTCTGTAGATCAAG+TGG | + | chr5_1:26492847-26492866 | None:intergenic | 40.0% | |
| CACTTGATCTACAGAAACTC+AGG | - | chr5_1:26492845-26492864 | Msa0726090:intron | 40.0% | |
| CGCCCTAAATTCTCAATTTG+AGG | + | chr5_1:26492904-26492923 | None:intergenic | 40.0% | |
| !!! | CCTCAATCTTTTGAGTTCCT+CGG | + | chr5_1:26493040-26493059 | None:intergenic | 40.0% |
| CAAGAATGAATTAGAAGCCG+AGG | + | chr5_1:26493092-26493111 | None:intergenic | 40.0% | |
| AAGAGGGATTTGGATCTTCT+CGG | - | chr5_1:26493129-26493148 | Msa0726090:intron | 40.0% | |
| CTTCTCGGTTTCTGAATAAC+AGG | - | chr5_1:26493144-26493163 | Msa0726090:intron | 40.0% | |
| ! | GCTCTGATAGAGAAACCTTT+TGG | - | chr5_1:26493203-26493222 | Msa0726090:intron | 40.0% |
| ATTATCTCTTGTACACGTGG+TGG | - | chr5_1:26493528-26493547 | Msa0726090:intron | 40.0% | |
| AATTCAGGTATGCATTCCCT+TGG | - | chr5_1:26493750-26493769 | Msa0726090:intron | 40.0% | |
| ACACCGATATATATTGCAGC+TGG | - | chr5_1:26493881-26493900 | Msa0726090:intron | 40.0% | |
| ATTGCAGCTGGTGAGATTTA+TGG | - | chr5_1:26493893-26493912 | Msa0726090:intron | 40.0% | |
| GTTGACAAACTCACAAGTTG+GGG | + | chr5_1:26493956-26493975 | None:intergenic | 40.0% | |
| ACAACGAGCAGAAAAATGGA+AGG | + | chr5_1:26493989-26494008 | None:intergenic | 40.0% | |
| CCAAACAACGAGCAGAAAAA+TGG | + | chr5_1:26493993-26494012 | None:intergenic | 40.0% | |
| !! | CCATTTTTCTGCTCGTTGTT+TGG | - | chr5_1:26493990-26494009 | Msa0726090:intron | 40.0% |
| TTCTTGCGCTCATTAATGGT+TGG | - | chr5_1:26494038-26494057 | Msa0726090:intron | 40.0% | |
| CCCATCATAAGTAGGGATAA+AGG | + | chr5_1:26494267-26494286 | None:intergenic | 40.0% | |
| CCATGTTCCCATCATAAGTA+GGG | + | chr5_1:26494274-26494293 | None:intergenic | 40.0% | |
| GGGTAAATACATACCTTCGA+TGG | + | chr5_1:26494313-26494332 | None:intergenic | 40.0% | |
| TCGAAAAAAGGTCGTGGAAT+TGG | - | chr5_1:26494521-26494540 | Msa0726090:intron | 40.0% | |
| TATAATCGACAGACCAAAGG+AGG | - | chr5_1:26494644-26494663 | Msa0726090:five_prime_UTR | 40.0% | |
| TAGAAATAGTCCTCCTCCTT+TGG | + | chr5_1:26494660-26494679 | None:intergenic | 40.0% | |
| !!! | TACACTTTTTTCAGCTACCC+TGG | + | chr5_1:26494830-26494849 | None:intergenic | 40.0% |
| ! | GATCAGAGGGTATACGTTTG+AGG | - | chr5_1:26490287-26490306 | Msa0726090:intron | 45.0% |
| GGAAGAAAAGTAATCGGAGG+CGG | + | chr5_1:26490481-26490500 | None:intergenic | 45.0% | |
| GGAGGAAGAAAAGTAATCGG+AGG | + | chr5_1:26490484-26490503 | None:intergenic | 45.0% | |
| TCTTTGACCTGACAACCTAC+AGG | - | chr5_1:26491248-26491267 | Msa0726090:intron | 45.0% | |
| CTTGAATCAAATGCGTGCTG+CGG | - | chr5_1:26491316-26491335 | Msa0726090:intron | 45.0% | |
| CTTTCATTGGACCAGCTAAC+AGG | + | chr5_1:26491724-26491743 | None:intergenic | 45.0% | |
| GCACTGTTGTCAAATAGCAG+CGG | - | chr5_1:26491922-26491941 | Msa0726090:CDS | 45.0% | |
| TGGTGTAGGATAGCCAACAT+AGG | - | chr5_1:26492626-26492645 | Msa0726090:intron | 45.0% | |
| GACGCACGTCTAGCAAATAA+CGG | - | chr5_1:26492817-26492836 | Msa0726090:intron | 45.0% | |
| ATTCGGATGCTTCACGAGAA+GGG | - | chr5_1:26492931-26492950 | Msa0726090:intron | 45.0% | |
| CTAAGATGCAGTGCCACAAA+AGG | + | chr5_1:26492958-26492977 | None:intergenic | 45.0% | |
| !! | ATGGACATGTTGGCTTTCTC+AGG | - | chr5_1:26492985-26493004 | Msa0726090:CDS | 45.0% |
| ! | GCTTTCTCAGGTTGTACTCA+GGG | - | chr5_1:26492997-26493016 | Msa0726090:CDS | 45.0% |
| CCGAGGAACTCAAAAGATTG+AGG | - | chr5_1:26493037-26493056 | Msa0726090:CDS | 45.0% | |
| ATGAATTAGAAGCCGAGGCA+TGG | + | chr5_1:26493087-26493106 | None:intergenic | 45.0% | |
| CCACTACTCTCGTATCCAAA+AGG | + | chr5_1:26493221-26493240 | None:intergenic | 45.0% | |
| ! | CCTTTTGGATACGAGAGTAG+TGG | - | chr5_1:26493218-26493237 | Msa0726090:intron | 45.0% |
| ATTCCCTTGGTGGAGAGAAA+AGG | - | chr5_1:26493763-26493782 | Msa0726090:intron | 45.0% | |
| ! | TCTCCTTTTCTCTCCACCAA+GGG | + | chr5_1:26493769-26493788 | None:intergenic | 45.0% |
| ! | ATCTCCTTTTCTCTCCACCA+AGG | + | chr5_1:26493770-26493789 | None:intergenic | 45.0% |
| ! | TTCTGAAGAGAGGAGATCAC+AGG | - | chr5_1:26493793-26493812 | Msa0726090:intron | 45.0% |
| TCTGAAGAGAGGAGATCACA+GGG | - | chr5_1:26493794-26493813 | Msa0726090:intron | 45.0% | |
| ATGTCCTTTGACACCAGAAG+AGG | - | chr5_1:26493820-26493839 | Msa0726090:intron | 45.0% | |
| ACCTAAGGCTCGAAGAACTA+AGG | + | chr5_1:26493849-26493868 | None:intergenic | 45.0% | |
| ! | GTTCTTCGAGCCTTAGGTTT+TGG | - | chr5_1:26493851-26493870 | Msa0726090:intron | 45.0% |
| !! | TTCGAGCCTTAGGTTTTGGT+AGG | - | chr5_1:26493855-26493874 | Msa0726090:intron | 45.0% |
| !! | TCGAGCCTTAGGTTTTGGTA+GGG | - | chr5_1:26493856-26493875 | Msa0726090:intron | 45.0% |
| TGTCTCCCTACCAAAACCTA+AGG | + | chr5_1:26493864-26493883 | None:intergenic | 45.0% | |
| AGATTTATGGCGGTGAACGT+AGG | - | chr5_1:26493906-26493925 | Msa0726090:intron | 45.0% | |
| !! | AGTAGGGATAAAGGTGTCAC+TGG | + | chr5_1:26494258-26494277 | None:intergenic | 45.0% |
| ! | CCCTACTTATGATGGGAACA+TGG | - | chr5_1:26494271-26494290 | Msa0726090:CDS | 45.0% |
| GCCATGTTCCCATCATAAGT+AGG | + | chr5_1:26494275-26494294 | None:intergenic | 45.0% | |
| GTTGGATCGAAAAAAGGTCG+TGG | - | chr5_1:26494515-26494534 | Msa0726090:intron | 45.0% | |
| !!! | CGCAAACTCGTGCCATTTTA+GGG | + | chr5_1:26494568-26494587 | None:intergenic | 45.0% |
| CCTAAAATGGCACGAGTTTG+CGG | - | chr5_1:26494566-26494585 | Msa0726090:intron | 45.0% | |
| AGAGAATTGGACAGCCAACT+CGG | - | chr5_1:26494613-26494632 | Msa0726090:five_prime_UTR | 45.0% | |
| ACATAGACACTCATGAGGGT+TGG | + | chr5_1:26494685-26494704 | None:intergenic | 45.0% | |
| CCTCACATAGACACTCATGA+GGG | + | chr5_1:26494689-26494708 | None:intergenic | 45.0% | |
| TCCTCACATAGACACTCATG+AGG | + | chr5_1:26494690-26494709 | None:intergenic | 45.0% | |
| !! | GTATTATAATTAAATAATAA+CGG | - | chr5_1:26490897-26490916 | Msa0726090:CDS | 5.0% |
| ! | CATCATTTTGGGCAGACCCT+AGG | - | chr5_1:26491486-26491505 | Msa0726090:intron | 50.0% |
| TCATTGGACCAGCTAACAGG+AGG | + | chr5_1:26491721-26491740 | None:intergenic | 50.0% | |
| !! | CTGCAGATTCTGCCGCTTTA+TGG | - | chr5_1:26492763-26492782 | Msa0726090:intron | 50.0% |
| ! | GCCGCTTTATGGAAAGCACA+AGG | - | chr5_1:26492774-26492793 | Msa0726090:intron | 50.0% |
| ! | CAGGTGTCGTGTCAATTACG+AGG | - | chr5_1:26492864-26492883 | Msa0726090:intron | 50.0% |
| GATTCGGATGCTTCACGAGA+AGG | - | chr5_1:26492930-26492949 | Msa0726090:intron | 50.0% | |
| ! | TCACGAGAAGGGACCTTTTG+TGG | - | chr5_1:26492942-26492961 | Msa0726090:intron | 50.0% |
| ! | GGCTTTCTCAGGTTGTACTC+AGG | - | chr5_1:26492996-26493015 | Msa0726090:CDS | 50.0% |
| TTGCTCAGAGAAAGAAGCCG+AGG | - | chr5_1:26493020-26493039 | Msa0726090:CDS | 50.0% | |
| ! | TCATGTTTGGCTCCATGCCT+CGG | - | chr5_1:26493072-26493091 | Msa0726090:CDS | 50.0% |
| TCAGGTATGCATTCCCTTGG+TGG | - | chr5_1:26493753-26493772 | Msa0726090:intron | 50.0% | |
| TCCTTTGACACCAGAAGAGG+CGG | - | chr5_1:26493823-26493842 | Msa0726090:intron | 50.0% | |
| ! | GCCTTAGTTCTTCGAGCCTT+AGG | - | chr5_1:26493845-26493864 | Msa0726090:intron | 50.0% |
| GCAGCTGGTGAGATTTATGG+CGG | - | chr5_1:26493896-26493915 | Msa0726090:intron | 50.0% | |
| CCATCTGCGATGAGTGATTC+TGG | + | chr5_1:26494208-26494227 | None:intergenic | 50.0% | |
| CCAGAATCACTCATCGCAGA+TGG | - | chr5_1:26494205-26494224 | Msa0726090:intron | 50.0% | |
| ! | GATGGCCGCCTTGGATTTTA+TGG | - | chr5_1:26494223-26494242 | Msa0726090:intron | 50.0% |
| !!! | CCGCAAACTCGTGCCATTTT+AGG | + | chr5_1:26494569-26494588 | None:intergenic | 50.0% |
| AAATGGCACGAGTTTGCGGA+TGG | - | chr5_1:26494570-26494589 | Msa0726090:intron | 50.0% | |
| AATCGACAGACCAAAGGAGG+AGG | - | chr5_1:26494647-26494666 | Msa0726090:five_prime_UTR | 50.0% | |
| CCCTCATGAGTGTCTATGTG+AGG | - | chr5_1:26494686-26494705 | Msa0726090:five_prime_UTR | 50.0% | |
| GCATATTCTGCAAGCCTCAG+TGG | + | chr5_1:26494875-26494894 | None:intergenic | 50.0% | |
| !! | GCTAACAGGAGGCATCTCCA+GGG | + | chr5_1:26491710-26491729 | None:intergenic | 55.0% |
| !! | AGCTAACAGGAGGCATCTCC+AGG | + | chr5_1:26491711-26491730 | None:intergenic | 55.0% |
| TGGAGATGCCTCCTGTTAGC+TGG | - | chr5_1:26491710-26491729 | Msa0726090:CDS | 55.0% | |
| AGAACTAAGGCCGCCTCTTC+TGG | + | chr5_1:26493836-26493855 | None:intergenic | 55.0% | |
| ! | GCCGCCTCTTCTGGTGTCAA+AGG | + | chr5_1:26493827-26493846 | None:intergenic | 60.0% |
| CTCATCGCAGATGGCCGCCT+TGG | - | chr5_1:26494214-26494233 | Msa0726090:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 26489804 | 26494925 | 26489804 | ID=Msa0726090;Name=Msa0726090 |
| chr5_1 | mRNA | 26489804 | 26494925 | 26489804 | ID=Msa0726090-mRNA-1;Parent=Msa0726090;Name=Msa0726090-mRNA-1;_AED=0.07;_eAED=0.07;_QI=371|1|1|1|0.87|0.77|9|167|490 |
| chr5_1 | exon | 26489804 | 26490241 | 26489804 | ID=Msa0726090-mRNA-1:exon:9427;Parent=Msa0726090-mRNA-1 |
| chr5_1 | exon | 26490411 | 26490568 | 26490411 | ID=Msa0726090-mRNA-1:exon:9426;Parent=Msa0726090-mRNA-1 |
| chr5_1 | exon | 26490768 | 26490972 | 26490768 | ID=Msa0726090-mRNA-1:exon:9425;Parent=Msa0726090-mRNA-1 |
| chr5_1 | exon | 26491671 | 26491960 | 26491671 | ID=Msa0726090-mRNA-1:exon:9424;Parent=Msa0726090-mRNA-1 |
| chr5_1 | exon | 26492970 | 26493132 | 26492970 | ID=Msa0726090-mRNA-1:exon:9423;Parent=Msa0726090-mRNA-1 |
| chr5_1 | exon | 26493222 | 26493310 | 26493222 | ID=Msa0726090-mRNA-1:exon:9422;Parent=Msa0726090-mRNA-1 |
| chr5_1 | exon | 26493392 | 26493459 | 26493392 | ID=Msa0726090-mRNA-1:exon:9421;Parent=Msa0726090-mRNA-1 |
| chr5_1 | exon | 26494224 | 26494490 | 26494224 | ID=Msa0726090-mRNA-1:exon:9420;Parent=Msa0726090-mRNA-1 |
| chr5_1 | exon | 26494593 | 26494925 | 26494593 | ID=Msa0726090-mRNA-1:exon:9419;Parent=Msa0726090-mRNA-1 |
| chr5_1 | five_prime_UTR | 26494593 | 26494925 | 26494593 | ID=Msa0726090-mRNA-1:five_prime_utr;Parent=Msa0726090-mRNA-1 |
| chr5_1 | five_prime_UTR | 26494453 | 26494490 | 26494453 | ID=Msa0726090-mRNA-1:five_prime_utr;Parent=Msa0726090-mRNA-1 |
| chr5_1 | CDS | 26494224 | 26494452 | 26494224 | ID=Msa0726090-mRNA-1:cds;Parent=Msa0726090-mRNA-1 |
| chr5_1 | CDS | 26493392 | 26493459 | 26493392 | ID=Msa0726090-mRNA-1:cds;Parent=Msa0726090-mRNA-1 |
| chr5_1 | CDS | 26493222 | 26493310 | 26493222 | ID=Msa0726090-mRNA-1:cds;Parent=Msa0726090-mRNA-1 |
| chr5_1 | CDS | 26492970 | 26493132 | 26492970 | ID=Msa0726090-mRNA-1:cds;Parent=Msa0726090-mRNA-1 |
| chr5_1 | CDS | 26491671 | 26491960 | 26491671 | ID=Msa0726090-mRNA-1:cds;Parent=Msa0726090-mRNA-1 |
| chr5_1 | CDS | 26490768 | 26490972 | 26490768 | ID=Msa0726090-mRNA-1:cds;Parent=Msa0726090-mRNA-1 |
| chr5_1 | CDS | 26490411 | 26490568 | 26490411 | ID=Msa0726090-mRNA-1:cds;Parent=Msa0726090-mRNA-1 |
| chr5_1 | CDS | 26489971 | 26490241 | 26489971 | ID=Msa0726090-mRNA-1:cds;Parent=Msa0726090-mRNA-1 |
| chr5_1 | three_prime_UTR | 26489804 | 26489970 | 26489804 | ID=Msa0726090-mRNA-1:three_prime_utr;Parent=Msa0726090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
