Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453230 | XP_003600113.1 | 90.710 | 183 | 3 | 1 | 1 | 169 | 1 | 183 | 1.80e-114 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453230 | G7IY22 | 90.710 | 183 | 3 | 1 | 1 | 169 | 1 | 183 | 8.58e-115 | 332 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0453230 | 0.807623 | 4.617423e-50 | -8.615850e-47 |
| Msa0006290 | Msa0453230 | 0.807370 | 5.226129e-50 | -8.615850e-47 |
| Msa0008090 | Msa0453230 | 0.811220 | 7.808642e-51 | -8.615850e-47 |
| Msa0026660 | Msa0453230 | 0.800217 | 1.598431e-48 | -8.615850e-47 |
| Msa0027260 | Msa0453230 | 0.843906 | 1.050342e-58 | -8.615850e-47 |
| Msa0032260 | Msa0453230 | 0.831822 | 1.342632e-55 | -8.615850e-47 |
| Msa0040690 | Msa0453230 | 0.802520 | 5.396443e-49 | -8.615850e-47 |
| Msa0042280 | Msa0453230 | 0.814216 | 1.724821e-51 | -8.615850e-47 |
| Msa0047160 | Msa0453230 | 0.842088 | 3.201966e-58 | -8.615850e-47 |
| Msa0048180 | Msa0453230 | 0.827625 | 1.410769e-54 | -8.615850e-47 |
| Msa0052610 | Msa0453230 | 0.806713 | 7.196616e-50 | -8.615850e-47 |
| Msa0057710 | Msa0453230 | 0.829088 | 6.260973e-55 | -8.615850e-47 |
| Msa0060770 | Msa0453230 | 0.800356 | 1.498038e-48 | -8.615850e-47 |
| Msa0073670 | Msa0453230 | 0.847172 | 1.368258e-59 | -8.615850e-47 |
| Msa0076000 | Msa0453230 | 0.806586 | 7.656288e-50 | -8.615850e-47 |
| Msa0094470 | Msa0453230 | 0.847858 | 8.862561e-60 | -8.615850e-47 |
| Msa0094950 | Msa0453230 | 0.803156 | 3.987811e-49 | -8.615850e-47 |
| Msa0097810 | Msa0453230 | 0.804956 | 1.684328e-49 | -8.615850e-47 |
| Msa0097850 | Msa0453230 | 0.808341 | 3.248413e-50 | -8.615850e-47 |
| Msa0100300 | Msa0453230 | 0.802877 | 4.554319e-49 | -8.615850e-47 |
| Msa0111330 | Msa0453230 | 0.803625 | 3.187929e-49 | -8.615850e-47 |
| Msa0124990 | Msa0453230 | 0.800582 | 1.347039e-48 | -8.615850e-47 |
| Msa0127040 | Msa0453230 | 0.812094 | 5.040687e-51 | -8.615850e-47 |
| Msa0127310 | Msa0453230 | 0.850789 | 1.352870e-60 | -8.615850e-47 |
| Msa0128860 | Msa0453230 | 0.819667 | 1.029523e-52 | -8.615850e-47 |
| Msa0137040 | Msa0453230 | 0.801914 | 7.190111e-49 | -8.615850e-47 |
| Msa0137610 | Msa0453230 | -0.810998 | 8.720120e-51 | -8.615850e-47 |
| Msa0141340 | Msa0453230 | 0.813915 | 2.009581e-51 | -8.615850e-47 |
| Msa0144540 | Msa0453230 | 0.809528 | 1.809742e-50 | -8.615850e-47 |
| Msa0165950 | Msa0453230 | 0.801289 | 9.657880e-49 | -8.615850e-47 |
| Msa0167480 | Msa0453230 | 0.834755 | 2.494769e-56 | -8.615850e-47 |
| Msa0174730 | Msa0453230 | 0.818113 | 2.321848e-52 | -8.615850e-47 |
| Msa0180020 | Msa0453230 | 0.802643 | 5.089866e-49 | -8.615850e-47 |
| Msa0194480 | Msa0453230 | 0.805535 | 1.273642e-49 | -8.615850e-47 |
| Msa0194540 | Msa0453230 | 0.803760 | 2.988844e-49 | -8.615850e-47 |
| Msa0199690 | Msa0453230 | 0.824079 | 9.803715e-54 | -8.615850e-47 |
| Msa0199880 | Msa0453230 | 0.824998 | 5.955457e-54 | -8.615850e-47 |
| Msa0226470 | Msa0453230 | 0.815800 | 7.676479e-52 | -8.615850e-47 |
| Msa0227400 | Msa0453230 | 0.819868 | 9.263314e-53 | -8.615850e-47 |
| Msa0228070 | Msa0453230 | 0.804044 | 2.609294e-49 | -8.615850e-47 |
| Msa0231100 | Msa0453230 | 0.843339 | 1.489295e-58 | -8.615850e-47 |
| Msa0231880 | Msa0453230 | 0.811186 | 7.939980e-51 | -8.615850e-47 |
| Msa0236270 | Msa0453230 | 0.803292 | 3.737767e-49 | -8.615850e-47 |
| Msa0369220 | Msa0453230 | 0.826207 | 3.079760e-54 | -8.615850e-47 |
| Msa0369450 | Msa0453230 | 0.823077 | 1.681970e-53 | -8.615850e-47 |
| Msa0376300 | Msa0453230 | 0.814190 | 1.748191e-51 | -8.615850e-47 |
| Msa0392940 | Msa0453230 | 0.801201 | 1.006906e-48 | -8.615850e-47 |
| Msa0413450 | Msa0453230 | 0.802744 | 4.852240e-49 | -8.615850e-47 |
| Msa0436200 | Msa0453230 | 0.800174 | 1.630841e-48 | -8.615850e-47 |
| Msa0437690 | Msa0453230 | -0.812528 | 4.052225e-51 | -8.615850e-47 |
| Msa0443390 | Msa0453230 | 0.835153 | 1.980805e-56 | -8.615850e-47 |
| Msa0453230 | Msa0458060 | 0.836116 | 1.130106e-56 | -8.615850e-47 |
| Msa0453230 | Msa0471590 | 0.808645 | 2.797996e-50 | -8.615850e-47 |
| Msa0453230 | Msa0484290 | 0.800201 | 1.610272e-48 | -8.615850e-47 |
| Msa0453230 | Msa0505150 | 0.815194 | 1.047188e-51 | -8.615850e-47 |
| Msa0453230 | Msa0508590 | 0.807213 | 5.641861e-50 | -8.615850e-47 |
| Msa0453230 | Msa0508870 | 0.817680 | 2.909079e-52 | -8.615850e-47 |
| Msa0453230 | Msa0509950 | -0.811462 | 6.916898e-51 | -8.615850e-47 |
| Msa0453230 | Msa0524500 | 0.816942 | 4.264063e-52 | -8.615850e-47 |
| Msa0453230 | Msa0524590 | 0.803717 | 3.051790e-49 | -8.615850e-47 |
| Msa0453230 | Msa0526540 | 0.822323 | 2.519378e-53 | -8.615850e-47 |
| Msa0453230 | Msa0534900 | 0.810963 | 8.875166e-51 | -8.615850e-47 |
| Msa0453230 | Msa0546360 | 0.836782 | 7.649738e-57 | -8.615850e-47 |
| Msa0453230 | Msa0552810 | 0.803454 | 3.458940e-49 | -8.615850e-47 |
| Msa0453230 | Msa0558810 | 0.805220 | 1.482982e-49 | -8.615850e-47 |
| Msa0453230 | Msa0560470 | 0.824015 | 1.014474e-53 | -8.615850e-47 |
| Msa0453230 | Msa0571920 | 0.802544 | 5.335444e-49 | -8.615850e-47 |
| Msa0453230 | Msa0576940 | 0.819414 | 1.175847e-52 | -8.615850e-47 |
| Msa0453230 | Msa0581070 | 0.819458 | 1.149532e-52 | -8.615850e-47 |
| Msa0453230 | Msa0581110 | 0.806816 | 6.845826e-50 | -8.615850e-47 |
| Msa0453230 | Msa0581130 | 0.810525 | 1.103888e-50 | -8.615850e-47 |
| Msa0453230 | Msa0600600 | 0.803839 | 2.877841e-49 | -8.615850e-47 |
| Msa0453230 | Msa0610390 | 0.823659 | 1.229346e-53 | -8.615850e-47 |
| Msa0453230 | Msa0613970 | 0.810732 | 9.956978e-51 | -8.615850e-47 |
| Msa0453230 | Msa0615440 | 0.805466 | 1.317000e-49 | -8.615850e-47 |
| Msa0453230 | Msa0615490 | 0.805679 | 1.188214e-49 | -8.615850e-47 |
| Msa0453230 | Msa0615580 | 0.827169 | 1.814877e-54 | -8.615850e-47 |
| Msa0453230 | Msa0616240 | 0.805319 | 1.413714e-49 | -8.615850e-47 |
| Msa0453230 | Msa0621950 | 0.821285 | 4.378400e-53 | -8.615850e-47 |
| Msa0453230 | Msa0639120 | 0.828484 | 8.762764e-55 | -8.615850e-47 |
| Msa0453230 | Msa0650920 | 0.829695 | 4.457570e-55 | -8.615850e-47 |
| Msa0453230 | Msa0654870 | 0.817934 | 2.548367e-52 | -8.615850e-47 |
| Msa0453230 | Msa0663900 | 0.812146 | 4.909712e-51 | -8.615850e-47 |
| Msa0453230 | Msa0666230 | 0.820667 | 6.078165e-53 | -8.615850e-47 |
| Msa0453230 | Msa0677290 | 0.812830 | 3.479419e-51 | -8.615850e-47 |
| Msa0453230 | Msa0684500 | 0.807091 | 5.986687e-50 | -8.615850e-47 |
| Msa0453230 | Msa0687630 | 0.830254 | 3.257772e-55 | -8.615850e-47 |
| Msa0453230 | Msa0689500 | 0.810632 | 1.046852e-50 | -8.615850e-47 |
| Msa0453230 | Msa0691900 | 0.809585 | 1.759683e-50 | -8.615850e-47 |
| Msa0453230 | Msa0692840 | 0.805015 | 1.636601e-49 | -8.615850e-47 |
| Msa0453230 | Msa0692940 | 0.815630 | 8.377276e-52 | -8.615850e-47 |
| Msa0453230 | Msa0694990 | 0.807263 | 5.504797e-50 | -8.615850e-47 |
| Msa0453230 | Msa0695130 | 0.800200 | 1.611223e-48 | -8.615850e-47 |
| Msa0453230 | Msa0698490 | 0.804545 | 2.052390e-49 | -8.615850e-47 |
| Msa0453230 | Msa0698660 | 0.807287 | 5.440849e-50 | -8.615850e-47 |
| Msa0453230 | Msa0699570 | 0.805830 | 1.104403e-49 | -8.615850e-47 |
| Msa0453230 | Msa0711490 | 0.808507 | 2.994451e-50 | -8.615850e-47 |
| Msa0453230 | Msa0722020 | 0.828884 | 7.013089e-55 | -8.615850e-47 |
| Msa0453230 | Msa0726090 | 0.801180 | 1.016634e-48 | -8.615850e-47 |
| Msa0453230 | Msa0733480 | 0.832963 | 7.001852e-56 | -8.615850e-47 |
| Msa0453230 | Msa0734960 | 0.824744 | 6.837063e-54 | -8.615850e-47 |
| Msa0453230 | Msa0738100 | 0.814965 | 1.177697e-51 | -8.615850e-47 |
| Msa0453230 | Msa0749760 | 0.806302 | 8.789031e-50 | -8.615850e-47 |
| Msa0453230 | Msa0751010 | 0.819605 | 1.063638e-52 | -8.615850e-47 |
| Msa0453230 | Msa0763020 | 0.823293 | 1.497852e-53 | -8.615850e-47 |
| Msa0453230 | Msa0763070 | 0.827471 | 1.535931e-54 | -8.615850e-47 |
| Msa0453230 | Msa0774540 | 0.830832 | 2.351157e-55 | -8.615850e-47 |
| Msa0453230 | Msa0785130 | 0.805153 | 1.531328e-49 | -8.615850e-47 |
| Msa0453230 | Msa0786270 | 0.808599 | 2.861136e-50 | -8.615850e-47 |
| Msa0453230 | Msa0787750 | 0.811282 | 7.570191e-51 | -8.615850e-47 |
| Msa0453230 | Msa0794050 | 0.815819 | 7.605159e-52 | -8.615850e-47 |
| Msa0453230 | Msa0805500 | 0.844953 | 5.491622e-59 | -8.615850e-47 |
| Msa0453230 | Msa0812140 | 0.806191 | 9.273107e-50 | -8.615850e-47 |
| Msa0453230 | Msa0812570 | 0.813102 | 3.033033e-51 | -8.615850e-47 |
| Msa0453230 | Msa0814250 | 0.802012 | 6.865025e-49 | -8.615850e-47 |
| Msa0453230 | Msa0818770 | 0.814690 | 1.354994e-51 | -8.615850e-47 |
| Msa0453230 | Msa0823090 | 0.809550 | 1.790665e-50 | -8.615850e-47 |
| Msa0453230 | Msa0824640 | 0.802218 | 6.225713e-49 | -8.615850e-47 |
| Msa0453230 | Msa0826500 | 0.840170 | 1.021463e-57 | -8.615850e-47 |
| Msa0453230 | Msa0830880 | 0.803521 | 3.350292e-49 | -8.615850e-47 |
| Msa0453230 | Msa0839200 | 0.801892 | 7.265165e-49 | -8.615850e-47 |
| Msa0453230 | Msa0847080 | 0.803524 | 3.346084e-49 | -8.615850e-47 |
| Msa0453230 | Msa0852390 | 0.822123 | 2.803557e-53 | -8.615850e-47 |
| Msa0453230 | Msa0852860 | 0.800502 | 1.398707e-48 | -8.615850e-47 |
| Msa0453230 | Msa0864010 | 0.805480 | 1.308060e-49 | -8.615850e-47 |
| Msa0453230 | Msa0888940 | 0.807025 | 6.182750e-50 | -8.615850e-47 |
| Msa0453230 | Msa0900630 | 0.814721 | 1.333745e-51 | -8.615850e-47 |
| Msa0453230 | Msa0902760 | 0.809673 | 1.684764e-50 | -8.615850e-47 |
| Msa0453230 | Msa0926460 | 0.820672 | 6.060094e-53 | -8.615850e-47 |
| Msa0453230 | Msa0959840 | 0.815219 | 1.034104e-51 | -8.615850e-47 |
| Msa0453230 | Msa0965860 | 0.804311 | 2.295916e-49 | -8.615850e-47 |
| Msa0453230 | Msa0968590 | 0.800241 | 1.580598e-48 | -8.615850e-47 |
| Msa0453230 | Msa0974810 | 0.803033 | 4.229040e-49 | -8.615850e-47 |
| Msa0453230 | Msa1006840 | 0.831818 | 1.345652e-55 | -8.615850e-47 |
| Msa0453230 | Msa1013040 | 0.803887 | 2.812465e-49 | -8.615850e-47 |
| Msa0453230 | Msa1013400 | 0.804198 | 2.423313e-49 | -8.615850e-47 |
| Msa0453230 | Msa1013770 | 0.815430 | 9.283807e-52 | -8.615850e-47 |
| Msa0453230 | Msa1019240 | 0.853807 | 1.871280e-61 | -8.615850e-47 |
| Msa0453230 | Msa1019260 | 0.852471 | 4.518032e-61 | -8.615850e-47 |
| Msa0453230 | Msa1040400 | 0.819171 | 1.336169e-52 | -8.615850e-47 |
| Msa0453230 | Msa1055410 | 0.848066 | 7.767883e-60 | -8.615850e-47 |
| Msa0453230 | Msa1073900 | 0.809357 | 1.969476e-50 | -8.615850e-47 |
| Msa0453230 | Msa1081150 | 0.805624 | 1.219896e-49 | -8.615850e-47 |
| Msa0453230 | Msa1084470 | 0.822531 | 2.254225e-53 | -8.615850e-47 |
| Msa0453230 | Msa1093330 | 0.815363 | 9.604998e-52 | -8.615850e-47 |
| Msa0453230 | Msa1093530 | 0.807971 | 3.895240e-50 | -8.615850e-47 |
| Msa0453230 | Msa1093840 | 0.814450 | 1.530861e-51 | -8.615850e-47 |
| Msa0453230 | Msa1104140 | 0.830507 | 2.824844e-55 | -8.615850e-47 |
| Msa0453230 | Msa1104210 | 0.845019 | 5.270162e-59 | -8.615850e-47 |
| Msa0453230 | Msa1119200 | 0.829658 | 4.550833e-55 | -8.615850e-47 |
| Msa0453230 | Msa1122820 | 0.805368 | 1.381001e-49 | -8.615850e-47 |
| Msa0453230 | Msa1126510 | 0.824877 | 6.361182e-54 | -8.615850e-47 |
| Msa0453230 | Msa1126770 | 0.804027 | 2.629997e-49 | -8.615850e-47 |
| Msa0453230 | Msa1126830 | 0.809372 | 1.955063e-50 | -8.615850e-47 |
| Msa0453230 | Msa1131560 | 0.842515 | 2.467782e-58 | -8.615850e-47 |
| Msa0453230 | Msa1143840 | 0.808146 | 3.573677e-50 | -8.615850e-47 |
| Msa0453230 | Msa1165780 | 0.816690 | 4.857119e-52 | -8.615850e-47 |
| Msa0453230 | Msa1165870 | 0.817434 | 3.304638e-52 | -8.615850e-47 |
| Msa0453230 | Msa1165960 | 0.813450 | 2.543897e-51 | -8.615850e-47 |
| Msa0453230 | Msa1166330 | 0.801353 | 9.370721e-49 | -8.615850e-47 |
| Msa0453230 | Msa1166860 | 0.815974 | 7.020531e-52 | -8.615850e-47 |
| Msa0453230 | Msa1166870 | 0.836718 | 7.938156e-57 | -8.615850e-47 |
| Msa0453230 | Msa1169550 | 0.803645 | 3.158317e-49 | -8.615850e-47 |
| Msa0453230 | Msa1174100 | 0.807229 | 5.597174e-50 | -8.615850e-47 |
| Msa0453230 | Msa1179950 | 0.834752 | 2.498947e-56 | -8.615850e-47 |
| Msa0453230 | Msa1179980 | 0.834783 | 2.454633e-56 | -8.615850e-47 |
| Msa0453230 | Msa1183660 | 0.833985 | 3.893149e-56 | -8.615850e-47 |
| Msa0453230 | Msa1184370 | 0.815688 | 8.133355e-52 | -8.615850e-47 |
| Msa0453230 | Msa1201830 | 0.823896 | 1.081879e-53 | -8.615850e-47 |
| Msa0453230 | Msa1202580 | 0.834796 | 2.436409e-56 | -8.615850e-47 |
| Msa0453230 | Msa1204250 | 0.844407 | 7.705445e-59 | -8.615850e-47 |
| Msa0453230 | Msa1207270 | 0.800050 | 1.728699e-48 | -8.615850e-47 |
| Msa0453230 | Msa1211830 | 0.816102 | 6.575908e-52 | -8.615850e-47 |
| Msa0453230 | Msa1218600 | 0.837131 | 6.229305e-57 | -8.615850e-47 |
| Msa0453230 | Msa1227690 | 0.837479 | 5.074521e-57 | -8.615850e-47 |
| Msa0453230 | Msa1237940 | 0.834452 | 2.973859e-56 | -8.615850e-47 |
| Msa0453230 | Msa1265630 | 0.840658 | 7.617710e-58 | -8.615850e-47 |
| Msa0453230 | Msa1270620 | 0.847754 | 9.467531e-60 | -8.615850e-47 |
| Msa0453230 | Msa1270690 | 0.838507 | 2.759931e-57 | -8.615850e-47 |
| Msa0453230 | Msa1271580 | 0.827733 | 1.329145e-54 | -8.615850e-47 |
| Msa0453230 | Msa1281190 | 0.804963 | 1.678341e-49 | -8.615850e-47 |
| Msa0453230 | Msa1286510 | 0.805458 | 1.321808e-49 | -8.615850e-47 |
| Msa0453230 | Msa1294840 | 0.815671 | 8.202694e-52 | -8.615850e-47 |
| Msa0453230 | Msa1295110 | 0.838262 | 3.192678e-57 | -8.615850e-47 |
| Msa0453230 | Msa1296830 | 0.801096 | 1.058071e-48 | -8.615850e-47 |
| Msa0453230 | Msa1299700 | 0.824404 | 8.223256e-54 | -8.615850e-47 |
| Msa0453230 | Msa1306990 | 0.836761 | 7.742839e-57 | -8.615850e-47 |
| Msa0453230 | Msa1331710 | 0.807875 | 4.081522e-50 | -8.615850e-47 |
| Msa0453230 | Msa1332220 | 0.806874 | 6.654526e-50 | -8.615850e-47 |
| Msa0453230 | Msa1332590 | 0.815083 | 1.108462e-51 | -8.615850e-47 |
| Msa0453230 | Msa1333110 | 0.843651 | 1.229272e-58 | -8.615850e-47 |
| Msa0453230 | Msa1341070 | 0.807648 | 4.562410e-50 | -8.615850e-47 |
| Msa0453230 | Msa1349570 | 0.803150 | 3.999083e-49 | -8.615850e-47 |
| Msa0453230 | Msa1351540 | 0.807188 | 5.710944e-50 | -8.615850e-47 |
| Msa0453230 | Msa1355700 | 0.800015 | 1.757228e-48 | -8.615850e-47 |
| Msa0453230 | Msa1356440 | 0.800685 | 1.283446e-48 | -8.615850e-47 |
| Msa0453230 | Msa1359390 | 0.800898 | 1.161151e-48 | -8.615850e-47 |
| Msa0453230 | Msa1363330 | 0.819855 | 9.328037e-53 | -8.615850e-47 |
| Msa0453230 | Msa1365150 | 0.820413 | 6.951023e-53 | -8.615850e-47 |
| Msa0453230 | Msa1367880 | 0.815525 | 8.841058e-52 | -8.615850e-47 |
| Msa0453230 | Msa1368210 | 0.823695 | 1.205721e-53 | -8.615850e-47 |
| Msa0453230 | Msa1376650 | 0.818083 | 2.357934e-52 | -8.615850e-47 |
| Msa0453230 | Msa1379760 | 0.823436 | 1.386846e-53 | -8.615850e-47 |
| Msa0453230 | Msa1386600 | 0.819961 | 8.822268e-53 | -8.615850e-47 |
| Msa0453230 | Msa1394290 | 0.826903 | 2.100680e-54 | -8.615850e-47 |
| Msa0453230 | Msa1394500 | 0.805424 | 1.344074e-49 | -8.615850e-47 |
| Msa0453230 | Msa1397940 | 0.832222 | 1.069279e-55 | -8.615850e-47 |
| Msa0453230 | Msa1404190 | 0.818247 | 2.165036e-52 | -8.615850e-47 |
| Msa0453230 | Msa1432700 | 0.816289 | 5.972500e-52 | -8.615850e-47 |
| Msa0453230 | Msa1433600 | 0.805344 | 1.396626e-49 | -8.615850e-47 |
| Msa0453230 | Msa1438640 | 0.818729 | 1.683945e-52 | -8.615850e-47 |
| Msa0453230 | Msa1444310 | 0.848762 | 4.984031e-60 | -8.615850e-47 |
| Msa0453230 | Msa1450280 | 0.833701 | 4.585992e-56 | -8.615850e-47 |
| Msa0453230 | Msa1459960 | 0.801099 | 1.056202e-48 | -8.615850e-47 |
| Msa0453230 | Msa1461490 | 0.805575 | 1.249172e-49 | -8.615850e-47 |
| Msa0239450 | Msa0453230 | 0.817106 | 3.917397e-52 | -8.615850e-47 |
| Msa0241800 | Msa0453230 | 0.809574 | 1.769036e-50 | -8.615850e-47 |
| Msa0242230 | Msa0453230 | 0.801438 | 9.003471e-49 | -8.615850e-47 |
| Msa0260240 | Msa0453230 | 0.805282 | 1.439297e-49 | -8.615850e-47 |
| Msa0260280 | Msa0453230 | 0.800409 | 1.461152e-48 | -8.615850e-47 |
| Msa0262310 | Msa0453230 | 0.807094 | 5.979592e-50 | -8.615850e-47 |
| Msa0262480 | Msa0453230 | 0.829639 | 4.600908e-55 | -8.615850e-47 |
| Msa0275360 | Msa0453230 | 0.810300 | 1.234354e-50 | -8.615850e-47 |
| Msa0280430 | Msa0453230 | 0.838105 | 3.503635e-57 | -8.615850e-47 |
| Msa0291520 | Msa0453230 | 0.808539 | 2.947518e-50 | -8.615850e-47 |
| Msa0300350 | Msa0453230 | 0.826241 | 3.021824e-54 | -8.615850e-47 |
| Msa0304590 | Msa0453230 | 0.843809 | 1.115122e-58 | -8.615850e-47 |
| Msa0304660 | Msa0453230 | 0.844772 | 6.146689e-59 | -8.615850e-47 |
| Msa0331700 | Msa0453230 | 0.843636 | 1.240292e-58 | -8.615850e-47 |
| Msa0337650 | Msa0453230 | 0.835545 | 1.576469e-56 | -8.615850e-47 |
| Msa0355270 | Msa0453230 | 0.800349 | 1.502751e-48 | -8.615850e-47 |
| Msa0360990 | Msa0453230 | 0.943341 | 1.433134e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453230 | MtrunA17_Chr3g0099071 | 90.710 | 183 | 3 | 1 | 1 | 169 | 1 | 183 | 1.65e-118 | 332 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453230 | AT4G26965.1 | 58.065 | 186 | 59 | 2 | 1 | 169 | 1 | 184 | 1.25e-65 | 199 |
| Msa0453230 | AT4G26965.2 | 59.732 | 149 | 41 | 2 | 38 | 169 | 1 | 147 | 5.01e-48 | 153 |
Find 77 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGATGGGTGGTGTTTA+AGG | 0.097388 | 3_3:-43265332 | Msa0453230:CDS |
| ACCATCAATTTGTTCATTTC+TGG | 0.124667 | 3_3:+43266509 | None:intergenic |
| CCTGACTCTACTTCCTTCTT+TGG | 0.206566 | 3_3:+43262837 | None:intergenic |
| TAGTTATTTGTCTGAAAATA+TGG | 0.219909 | 3_3:-43260914 | Msa0453230:three_prime_UTR |
| GGTTGAATGGGCAGCGTAAA+AGG | 0.231907 | 3_3:-43265147 | Msa0453230:CDS |
| TTGGAATATAACGTTGATTC+TGG | 0.241713 | 3_3:+43266725 | None:intergenic |
| AGTTATCCTTTCCTTTCTAT+TGG | 0.245795 | 3_3:-43260791 | Msa0453230:three_prime_UTR |
| AGGGTACTTGGGAAGATTAC+TGG | 0.298626 | 3_3:-43266588 | Msa0453230:CDS |
| ATTAGAACACACAACAAGTT+TGG | 0.320829 | 3_3:+43266706 | None:intergenic |
| GTTGGAGGCTGCCAGGTTCC+AGG | 0.321767 | 3_3:+43261316 | None:intergenic |
| ACTAATTGCTCCAAGTGATA+TGG | 0.335532 | 3_3:+43260863 | None:intergenic |
| GTCTGAAAATATGGATGTAT+TGG | 0.340919 | 3_3:-43260905 | Msa0453230:three_prime_UTR |
| TGGCAGCCTCCAACTTGATC+TGG | 0.355187 | 3_3:-43261307 | Msa0453230:exon |
| ACCAGAAATGAACAAATTGA+TGG | 0.357823 | 3_3:-43266510 | Msa0453230:CDS |
| AAGAGATGGGTGGTGTTTAA+GGG | 0.371563 | 3_3:-43265331 | Msa0453230:CDS |
| TTCACATTATCATAGATAAC+AGG | 0.373890 | 3_3:-43260818 | Msa0453230:three_prime_UTR |
| TTCAGGACTTCAGAGCCAAC+TGG | 0.383317 | 3_3:-43261358 | Msa0453230:intron |
| GTTTCAGGAACAGATGGAAT+TGG | 0.393307 | 3_3:-43263119 | Msa0453230:intron |
| ATGGCTGGTGTGGATAAAAC+TGG | 0.401451 | 3_3:-43266546 | Msa0453230:CDS |
| TATGTGTGTCTGTGAGAAAC+AGG | 0.402264 | 3_3:+43266754 | None:intergenic |
| AATCAGAATGAGGCAAAATC+AGG | 0.414787 | 3_3:+43261260 | None:intergenic |
| TCCTAGTGAAAGAGAAGAGA+TGG | 0.447561 | 3_3:-43265345 | Msa0453230:intron |
| CATGATCCTACATCCATTCC+AGG | 0.453705 | 3_3:-43265304 | Msa0453230:intron |
| GAATGGATATGTTGGTTGAA+TGG | 0.457830 | 3_3:-43265160 | Msa0453230:CDS |
| GATATTATTTGTAAAGAACT+AGG | 0.464764 | 3_3:+43261065 | None:intergenic |
| ACTATCCTCTTATATATCTC+AGG | 0.470302 | 3_3:-43260768 | Msa0453230:three_prime_UTR |
| TTTCAATTTACCTCTGGAGT+TGG | 0.471997 | 3_3:+43265121 | None:intergenic |
| ACTTCAGAGCCAACTGGGTC+AGG | 0.472998 | 3_3:-43261352 | Msa0453230:CDS |
| AATGGATATGTTGGTTGAAT+GGG | 0.479178 | 3_3:-43265159 | Msa0453230:CDS |
| TGACTACCTTCGGAAGAAAC+CGG | 0.488607 | 3_3:+43262665 | None:intergenic |
| GTTGTTCACCAATCGAACTA+TGG | 0.489049 | 3_3:-43266565 | Msa0453230:CDS |
| AGATCAAGTTGGAGGCTGCC+AGG | 0.490958 | 3_3:+43261309 | None:intergenic |
| GGCAGCCTCCAACTTGATCT+GGG | 0.494082 | 3_3:-43261306 | Msa0453230:exon |
| CATAAAATATATACCTGGAA+TGG | 0.499350 | 3_3:+43265291 | None:intergenic |
| CCAAAGAAGGAAGTAGAGTC+AGG | 0.502701 | 3_3:-43262837 | Msa0453230:CDS |
| CAGGAATGTTGGTGTCAGTA+AGG | 0.508934 | 3_3:+43261279 | None:intergenic |
| CTCAAGTCATCCCTTGTGCC+AGG | 0.509785 | 3_3:+43262443 | None:intergenic |
| CAGTTTCCGGTTTCTTCCGA+AGG | 0.522530 | 3_3:-43262671 | Msa0453230:intron |
| TTCACCAATCGAACTATGGC+TGG | 0.525835 | 3_3:-43266561 | Msa0453230:CDS |
| TATATACCTGGAATGGATGT+AGG | 0.527072 | 3_3:+43265298 | None:intergenic |
| GGCAAGGGTCCTTGCTTGCA+AGG | 0.528303 | 3_3:+43260992 | None:intergenic |
| GTTGAATGGGCAGCGTAAAA+GGG | 0.537561 | 3_3:-43265146 | Msa0453230:CDS |
| AGTTCTCAAGAAAGAAGAAG+AGG | 0.538559 | 3_3:-43262869 | Msa0453230:CDS |
| AAGAGGATAGTCCAATAGAA+AGG | 0.540156 | 3_3:+43260780 | None:intergenic |
| GGGTACTTGGGAAGATTACT+GGG | 0.540612 | 3_3:-43266587 | Msa0453230:CDS |
| TGAGGCAAAATCAGGAATGT+TGG | 0.541862 | 3_3:+43261268 | None:intergenic |
| GAGGAAAGGAAAGCCAAAGA+AGG | 0.545436 | 3_3:-43262850 | Msa0453230:CDS |
| CACACCAGCCATAGTTCGAT+TGG | 0.548606 | 3_3:+43266557 | None:intergenic |
| CAATCGAACTATGGCTGGTG+TGG | 0.548825 | 3_3:-43266556 | Msa0453230:CDS |
| GTCCTCCCAGATCAAGTTGG+AGG | 0.564469 | 3_3:+43261301 | None:intergenic |
| ACAATCTTATCCATATCACT+TGG | 0.570544 | 3_3:-43260873 | Msa0453230:three_prime_UTR |
| TTATTCGTTTCAGGAACAGA+TGG | 0.571562 | 3_3:-43263125 | Msa0453230:intron |
| TCAAGAAAGAAGAAGAGGAA+AGG | 0.573085 | 3_3:-43262864 | Msa0453230:CDS |
| TTGAAGAATCACCTGGCACA+AGG | 0.573819 | 3_3:-43262454 | Msa0453230:CDS |
| TTGCACCTGAGATATATAAG+AGG | 0.577367 | 3_3:+43260763 | None:intergenic |
| TCAGGACTTCAGAGCCAACT+GGG | 0.578081 | 3_3:-43261357 | Msa0453230:intron |
| GATAGTCCAATAGAAAGGAA+AGG | 0.588422 | 3_3:+43260785 | None:intergenic |
| AATAAATAAAATATCACGCA+CGG | 0.590556 | 3_3:+43261231 | None:intergenic |
| GTCAGGCGTGTCGTCAACAC+TGG | 0.592271 | 3_3:-43262820 | Msa0453230:intron |
| CCTAGTGAAAGAGAAGAGAT+GGG | 0.599846 | 3_3:-43265344 | Msa0453230:intron |
| AAGGTCCTCCCAGATCAAGT+TGG | 0.610876 | 3_3:+43261298 | None:intergenic |
| AAAGATGCACCTGACCCAGT+TGG | 0.611828 | 3_3:+43261343 | None:intergenic |
| TCAAATCTAAACATTAACAA+AGG | 0.615999 | 3_3:-43261018 | Msa0453230:three_prime_UTR |
| AACGAGGTTGAAGAATCACC+TGG | 0.620751 | 3_3:-43262461 | Msa0453230:CDS |
| CTGGCACAAGGGATGACTTG+AGG | 0.632013 | 3_3:-43262442 | Msa0453230:intron |
| TGGTCATATTCGTCGAACAA+AGG | 0.634744 | 3_3:+43261142 | None:intergenic |
| TCCATTGTAGGAAACGCTAG+TGG | 0.650147 | 3_3:-43262719 | Msa0453230:intron |
| AACGCGTCAAGTTGTCATTG+TGG | 0.653574 | 3_3:+43261122 | None:intergenic |
| GGGGTAAAGAAATTCAATTG+TGG | 0.655027 | 3_3:+43266638 | None:intergenic |
| AGCCTCCAACTTGATCTGGG+AGG | 0.661097 | 3_3:-43261303 | Msa0453230:exon |
| GTGGTACAGTGACAGCATCA+TGG | 0.664664 | 3_3:+43266657 | None:intergenic |
| TAAAAGGGCTCCAACTCCAG+AGG | 0.675471 | 3_3:-43265131 | Msa0453230:intron |
| TTTCTTTAATATAGGTAACG+AGG | 0.678560 | 3_3:-43262477 | Msa0453230:intron |
| TGAAGAATCACCTGGCACAA+GGG | 0.690362 | 3_3:-43262453 | Msa0453230:CDS |
| TGGCTGGTGTGGATAAAACT+GGG | 0.698720 | 3_3:-43266545 | Msa0453230:CDS |
| ATGTGTGTCTGTGAGAAACA+GGG | 0.720896 | 3_3:+43266755 | None:intergenic |
| AGTGAAAGAGAAGAGATGGG+TGG | 0.731002 | 3_3:-43265341 | Msa0453230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTATTTATTTTATT+GGG | + | chr3_3:43260900-43260919 | None:intergenic | 0.0% |
| !!! | TTTTTATTTATTTATTTTAT+TGG | + | chr3_3:43260901-43260920 | None:intergenic | 0.0% |
| !!! | TTATTTATTTATTTTATTGG+GGG | + | chr3_3:43260898-43260917 | None:intergenic | 10.0% |
| !! | TTAAAAGTTTAAATTCAATA+GGG | + | chr3_3:43261920-43261939 | None:intergenic | 10.0% |
| !! | TAAATTGTTAAAGATAATTA+AGG | + | chr3_3:43263239-43263258 | None:intergenic | 10.0% |
| !!! | TGATTTTCTTAAATTATTAA+CGG | - | chr3_3:43263886-43263905 | Msa0453230:intron | 10.0% |
| !!! | AATAATTTAACTTTGAAAAA+AGG | + | chr3_3:43264931-43264950 | None:intergenic | 10.0% |
| !! | AAAGATTATATCAAAATTAT+TGG | + | chr3_3:43265752-43265771 | None:intergenic | 10.0% |
| !!! | AATTTTGATATAATCTTTTT+AGG | - | chr3_3:43265754-43265773 | Msa0453230:intron | 10.0% |
| !!! | ATTTTGATATAATCTTTTTA+GGG | - | chr3_3:43265755-43265774 | Msa0453230:intron | 10.0% |
| !! | CTTAAAAGTTTAAATTCAAT+AGG | + | chr3_3:43261921-43261940 | None:intergenic | 15.0% |
| !!! | TTGAATTTAAACTTTTAAGA+AGG | - | chr3_3:43261922-43261941 | Msa0453230:intron | 15.0% |
| !!! | TGAATTTAAACTTTTAAGAA+GGG | - | chr3_3:43261923-43261942 | Msa0453230:intron | 15.0% |
| !!! | TGTTAATTATTTTAGTTGAA+TGG | - | chr3_3:43262337-43262356 | Msa0453230:intron | 15.0% |
| !! | TTCAAAAAATTTGATAGATA+AGG | + | chr3_3:43264479-43264498 | None:intergenic | 15.0% |
| !! | ACATTTACTTTCTTTAATAT+AGG | - | chr3_3:43265029-43265048 | Msa0453230:intron | 15.0% |
| !! | AATGAAAATCCATTAAATTA+AGG | + | chr3_3:43265265-43265284 | None:intergenic | 15.0% |
| !!! | TATTTATTCCTCAAAAATTT+TGG | - | chr3_3:43266298-43266317 | Msa0453230:intron | 15.0% |
| !!! | AAATTATACCAAAATTTTTG+AGG | + | chr3_3:43266309-43266328 | None:intergenic | 15.0% |
| !! | ATAAATAAATAAAAATGCGG+AGG | - | chr3_3:43260906-43260925 | Msa0453230:three_prime_UTR | 20.0% |
| !! | TAAATAAATAAAAATGCGGA+GGG | - | chr3_3:43260907-43260926 | Msa0453230:three_prime_UTR | 20.0% |
| !! | CACAAGCATATATATATTAA+AGG | + | chr3_3:43261067-43261086 | None:intergenic | 20.0% |
| !! | ATATATATGCTTGTGTTTAT+TGG | - | chr3_3:43261072-43261091 | Msa0453230:three_prime_UTR | 20.0% |
| !!! | TTATGGGTTTTATTGATTTT+TGG | - | chr3_3:43261097-43261116 | Msa0453230:three_prime_UTR | 20.0% |
| !! | CTAATAGGAATTTAAGAAAA+TGG | - | chr3_3:43261367-43261386 | Msa0453230:intron | 20.0% |
| !!! | ATTTGGTAATACTTTGATAA+AGG | - | chr3_3:43261597-43261616 | Msa0453230:intron | 20.0% |
| !!! | TTTGGTAATACTTTGATAAA+GGG | - | chr3_3:43261598-43261617 | Msa0453230:intron | 20.0% |
| !!! | AATGTAACATTTTAAAACCA+TGG | - | chr3_3:43262049-43262068 | Msa0453230:intron | 20.0% |
| !! | ATTCTATTTCGTATTATTGA+TGG | - | chr3_3:43262306-43262325 | Msa0453230:intron | 20.0% |
| !!! | ATTTAACGATTTGTTCAATA+AGG | - | chr3_3:43262650-43262669 | Msa0453230:intron | 20.0% |
| !!! | TGTTTCTGAGATAATATATT+TGG | - | chr3_3:43263176-43263195 | Msa0453230:intron | 20.0% |
| !!! | ATTTAATAGTTGATACAAAG+AGG | + | chr3_3:43263561-43263580 | None:intergenic | 20.0% |
| !! | GAAAAATAAATTAAAGATGG+TGG | + | chr3_3:43263643-43263662 | None:intergenic | 20.0% |
| !! | GCTGAAAAATAAATTAAAGA+TGG | + | chr3_3:43263646-43263665 | None:intergenic | 20.0% |
| !! | TTGATAAAAATATAGTGTTC+CGG | - | chr3_3:43264052-43264071 | Msa0453230:intron | 20.0% |
| !! | AAATAATAATTTCACTTAGC+TGG | + | chr3_3:43264345-43264364 | None:intergenic | 20.0% |
| !! | AAAAAATTTGATAGATAAGG+TGG | + | chr3_3:43264476-43264495 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTTACTTACTCTT+AGG | - | chr3_3:43264752-43264771 | Msa0453230:intron | 20.0% |
| !! | CTAATTTATATTTCCATTGT+AGG | - | chr3_3:43264783-43264802 | Msa0453230:intron | 20.0% |
| !!! | GTCTTTTTTCCTTAATTTAA+TGG | - | chr3_3:43265253-43265272 | Msa0453230:intron | 20.0% |
| !! | AAATATCTAAACAAAAGGAT+TGG | + | chr3_3:43265302-43265321 | None:intergenic | 20.0% |
| !! | CATGAAAATATCTAAACAAA+AGG | + | chr3_3:43265307-43265326 | None:intergenic | 20.0% |
| !! | ATTAAAATCAATATAGTGAC+TGG | + | chr3_3:43265396-43265415 | None:intergenic | 20.0% |
| !! | CTTTGAACTTTAATTGTTAT+TGG | - | chr3_3:43265524-43265543 | Msa0453230:intron | 20.0% |
| !! | TTTCCTTTATAAAATAGTTC+AGG | - | chr3_3:43265580-43265599 | Msa0453230:intron | 20.0% |
| !! | AATAAATAAAATATCACGCA+CGG | + | chr3_3:43266286-43266305 | None:intergenic | 20.0% |
| !! | GATATTATTTGTAAAGAACT+AGG | + | chr3_3:43266452-43266471 | None:intergenic | 20.0% |
| !! | TCAAATCTAAACATTAACAA+AGG | - | chr3_3:43266496-43266515 | Msa0453230:intron | 20.0% |
| !! | TAGTTATTTGTCTGAAAATA+TGG | - | chr3_3:43266600-43266619 | Msa0453230:exon | 20.0% |
| !!! | CTGAGTTTTGTTTTTTATCT+TGG | + | chr3_3:43260729-43260748 | None:intergenic | 25.0% |
| ! | CTTGTGTTTATTGGATTTAT+GGG | - | chr3_3:43261081-43261100 | Msa0453230:three_prime_UTR | 25.0% |
| ! | CATAAAGTAATCATATGTGT+CGG | + | chr3_3:43261281-43261300 | None:intergenic | 25.0% |
| ! | ATATACTCATATGGTATACT+TGG | - | chr3_3:43261450-43261469 | Msa0453230:intron | 25.0% |
| ! | GAACATATATATCAAACCAT+AGG | + | chr3_3:43261551-43261570 | None:intergenic | 25.0% |
| !! | TCTTCTTAAGGTTTAGAATT+TGG | - | chr3_3:43261580-43261599 | Msa0453230:intron | 25.0% |
| ! | TAATACTTTGATAAAGGGTT+TGG | - | chr3_3:43261603-43261622 | Msa0453230:intron | 25.0% |
| ! | AAGTTTAAATTCAATAGGGT+TGG | + | chr3_3:43261916-43261935 | None:intergenic | 25.0% |
| ! | AGTAAAATAAGTAAGAACCA+TGG | + | chr3_3:43262069-43262088 | None:intergenic | 25.0% |
| !!! | TGTCTGATTATACTTGTTTT+TGG | - | chr3_3:43262144-43262163 | Msa0453230:intron | 25.0% |
| ! | CATAAAATATATACCTGGAA+TGG | + | chr3_3:43262226-43262245 | None:intergenic | 25.0% |
| !! | CATTCCAGGTATATATTTTA+TGG | - | chr3_3:43262224-43262243 | Msa0453230:intron | 25.0% |
| ! | ATCACATGTATTAATAGATG+TGG | + | chr3_3:43262288-43262307 | None:intergenic | 25.0% |
| !!! | TTTTAGTTGAATGGATATGT+TGG | - | chr3_3:43262346-43262365 | Msa0453230:intron | 25.0% |
| ! | TCGTTATATTGCTATAACAT+AGG | - | chr3_3:43262527-43262546 | Msa0453230:intron | 25.0% |
| ! | AGCAAAATGTTATCAAATAG+TGG | - | chr3_3:43262593-43262612 | Msa0453230:intron | 25.0% |
| !! | GTTCAATAAGGACAAAATTT+TGG | - | chr3_3:43262662-43262681 | Msa0453230:intron | 25.0% |
| !!! | ACAAAATTTTGGCTAAGATA+GGG | - | chr3_3:43262673-43262692 | Msa0453230:CDS | 25.0% |
| ! | TTTCTCTGAATATTACTTAG+AGG | - | chr3_3:43262918-43262937 | Msa0453230:intron | 25.0% |
| ! | TTCTCTGAATATTACTTAGA+GGG | - | chr3_3:43262919-43262938 | Msa0453230:intron | 25.0% |
| ! | CATTCTGTTCTTGTAATATT+CGG | - | chr3_3:43263021-43263040 | Msa0453230:intron | 25.0% |
| ! | GAAGTTAATTTCAGAATGAA+CGG | + | chr3_3:43263215-43263234 | None:intergenic | 25.0% |
| ! | CTAACATTAAAACCTATTAG+AGG | - | chr3_3:43263356-43263375 | Msa0453230:intron | 25.0% |
| ! | ATGAGAACAATAAGATTAGT+AGG | - | chr3_3:43263760-43263779 | Msa0453230:intron | 25.0% |
| ! | TGAGAACAATAAGATTAGTA+GGG | - | chr3_3:43263761-43263780 | Msa0453230:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr3_3:43263861-43263880 | None:intergenic | 25.0% |
| ! | TCTTAAATTATTAACGGTGT+CGG | - | chr3_3:43263892-43263911 | Msa0453230:intron | 25.0% |
| ! | TGAATTGGAAGAAAATTTCA+TGG | - | chr3_3:43264192-43264211 | Msa0453230:intron | 25.0% |
| !!! | ATTGCTTTTTTATTCGTTTC+AGG | - | chr3_3:43264380-43264399 | Msa0453230:intron | 25.0% |
| ! | TTTCTTTAATATAGGTAACG+AGG | - | chr3_3:43265037-43265056 | Msa0453230:intron | 25.0% |
| ! | CTTAGTAATGATTCTACTTA+GGG | + | chr3_3:43265366-43265385 | None:intergenic | 25.0% |
| ! | TCTTAGTAATGATTCTACTT+AGG | + | chr3_3:43265367-43265386 | None:intergenic | 25.0% |
| !! | AAATGACATTCTTTTGTTGA+AGG | - | chr3_3:43265439-43265458 | Msa0453230:intron | 25.0% |
| !! | ACTCCTGAACTATTTTATAA+AGG | + | chr3_3:43265586-43265605 | None:intergenic | 25.0% |
| ! | TATGTCCAAGTGTTTATATT+TGG | - | chr3_3:43265685-43265704 | Msa0453230:intron | 25.0% |
| ! | AGTAATGATATGAACTATGA+GGG | + | chr3_3:43266103-43266122 | None:intergenic | 25.0% |
| !! | GTTTGTAAAATTTTGCTTTC+AGG | - | chr3_3:43266139-43266158 | Msa0453230:intron | 25.0% |
| ! | AAAATTGGAATCAGAATTAC+TGG | - | chr3_3:43266575-43266594 | Msa0453230:CDS | 25.0% |
| ! | TTCACATTATCATAGATAAC+AGG | - | chr3_3:43266696-43266715 | Msa0453230:five_prime_UTR | 25.0% |
| !! | TTGGAATATAACGTTGATTC+TGG | + | chr3_3:43260792-43260811 | None:intergenic | 30.0% |
| ATTAGAACACACAACAAGTT+TGG | + | chr3_3:43260811-43260830 | None:intergenic | 30.0% | |
| ACCAGAAATGAACAAATTGA+TGG | - | chr3_3:43261004-43261023 | Msa0453230:intron | 30.0% | |
| ! | ACCATCAATTTGTTCATTTC+TGG | + | chr3_3:43261008-43261027 | None:intergenic | 30.0% |
| GCTTGTGTTTATTGGATTTA+TGG | - | chr3_3:43261080-43261099 | Msa0453230:three_prime_UTR | 30.0% | |
| AGATACTATCTATGCTTCAT+AGG | + | chr3_3:43261200-43261219 | None:intergenic | 30.0% | |
| ATCTAATAGAAGATACTCCT+CGG | - | chr3_3:43261216-43261235 | Msa0453230:three_prime_UTR | 30.0% | |
| CTTCATAAGTAGACACTAAT+AGG | - | chr3_3:43261352-43261371 | Msa0453230:CDS | 30.0% | |
| GGTGCTAAAATATACTCATA+TGG | - | chr3_3:43261441-43261460 | Msa0453230:intron | 30.0% | |
| ! | TGTTTTATAAATGCTGAGCT+TGG | - | chr3_3:43261484-43261503 | Msa0453230:intron | 30.0% |
| !!! | CAAGGTTTTTTTGTGGTTAA+TGG | - | chr3_3:43261523-43261542 | Msa0453230:intron | 30.0% |
| ! | TCAGGACCTTTATTTAAATC+TGG | - | chr3_3:43261766-43261785 | Msa0453230:intron | 30.0% |
| ! | CAGGACCTTTATTTAAATCT+GGG | - | chr3_3:43261767-43261786 | Msa0453230:intron | 30.0% |
| TTCTCATTGATCACTAAGAT+TGG | + | chr3_3:43261802-43261821 | None:intergenic | 30.0% | |
| GGTTCATTCATGATATCATT+TGG | - | chr3_3:43262012-43262031 | Msa0453230:intron | 30.0% | |
| GCTACCATAAAATATATACC+TGG | + | chr3_3:43262231-43262250 | None:intergenic | 30.0% | |
| CGTTCAACTGCTAAAATTAT+TGG | - | chr3_3:43262254-43262273 | Msa0453230:intron | 30.0% | |
| ! | AATGGATATGTTGGTTGAAT+GGG | - | chr3_3:43262355-43262374 | Msa0453230:intron | 30.0% |
| AATGCATTTCAATTTACCTC+TGG | + | chr3_3:43262402-43262421 | None:intergenic | 30.0% | |
| TAACCACTATTTAACAACAC+TGG | + | chr3_3:43262502-43262521 | None:intergenic | 30.0% | |
| TTGAACAAATCGCTATTGTT+TGG | - | chr3_3:43262555-43262574 | Msa0453230:intron | 30.0% | |
| !!! | GACAAAATTTTGGCTAAGAT+AGG | - | chr3_3:43262672-43262691 | Msa0453230:CDS | 30.0% |
| TAACATATTCTTGCAGACTA+AGG | - | chr3_3:43262956-43262975 | Msa0453230:intron | 30.0% | |
| ATTTCAGAATGAACGGTAAT+TGG | + | chr3_3:43263208-43263227 | None:intergenic | 30.0% | |
| AATGTTAGAACTGTTTCAAC+AGG | + | chr3_3:43263344-43263363 | None:intergenic | 30.0% | |
| ! | ACTAGATTTTCCTTTTCTCA+GGG | - | chr3_3:43263410-43263429 | Msa0453230:intron | 30.0% |
| GTGCATTATAACTAATGCTT+GGG | - | chr3_3:43263489-43263508 | Msa0453230:intron | 30.0% | |
| ATTCTATACAAAGAGACAGA+GGG | + | chr3_3:43263529-43263548 | None:intergenic | 30.0% | |
| TTGATACAAAGAGGACATTT+GGG | + | chr3_3:43263552-43263571 | None:intergenic | 30.0% | |
| !! | AGCTTTAAAATGCAATGCTT+TGG | - | chr3_3:43263702-43263721 | Msa0453230:intron | 30.0% |
| !! | GCTTTAAAATGCAATGCTTT+GGG | - | chr3_3:43263703-43263722 | Msa0453230:intron | 30.0% |
| !! | CTTTAAAATGCAATGCTTTG+GGG | - | chr3_3:43263704-43263723 | Msa0453230:intron | 30.0% |
| ACCTAATTGTATCATCAAAC+CGG | + | chr3_3:43264074-43264093 | None:intergenic | 30.0% | |
| ! | GTTTGATGATACAATTAGGT+GGG | - | chr3_3:43264074-43264093 | Msa0453230:intron | 30.0% |
| ATATGACTGTAAATGCACAT+GGG | - | chr3_3:43264102-43264121 | Msa0453230:intron | 30.0% | |
| ATTTCATGGCCTTTAATCAT+AGG | - | chr3_3:43264206-43264225 | Msa0453230:intron | 30.0% | |
| CCTATGATTCCTATGATTAA+AGG | + | chr3_3:43264218-43264237 | None:intergenic | 30.0% | |
| CCTTTAATCATAGGAATCAT+AGG | - | chr3_3:43264215-43264234 | Msa0453230:intron | 30.0% | |
| TGCGAAACTTATTCATGAAT+TGG | - | chr3_3:43264259-43264278 | Msa0453230:intron | 30.0% | |
| TCTCTGTATAGAACTAAACT+TGG | + | chr3_3:43264595-43264614 | None:intergenic | 30.0% | |
| !!! | TGCATAAAACTTTTCAAGTC+TGG | + | chr3_3:43264822-43264841 | None:intergenic | 30.0% |
| AACTTGAATCACACATATAC+TGG | - | chr3_3:43264957-43264976 | Msa0453230:intron | 30.0% | |
| AAGGAAAAAAGACATGAGAA+AGG | + | chr3_3:43265246-43265265 | None:intergenic | 30.0% | |
| TATATGCTCGTTCATAAATC+TGG | - | chr3_3:43266013-43266032 | Msa0453230:intron | 30.0% | |
| GAGTAATGATATGAACTATG+AGG | + | chr3_3:43266104-43266123 | None:intergenic | 30.0% | |
| AACCTGAAATGGCAAAAAAT+TGG | - | chr3_3:43266560-43266579 | Msa0453230:CDS | 30.0% | |
| !!! | TTCCAATTTTTTGCCATTTC+AGG | + | chr3_3:43266565-43266584 | None:intergenic | 30.0% |
| GTCTGAAAATATGGATGTAT+TGG | - | chr3_3:43266609-43266628 | Msa0453230:exon | 30.0% | |
| ACAATCTTATCCATATCACT+TGG | - | chr3_3:43266641-43266660 | Msa0453230:five_prime_UTR | 30.0% | |
| AGTTATCCTTTCCTTTCTAT+TGG | - | chr3_3:43266723-43266742 | Msa0453230:five_prime_UTR | 30.0% | |
| ACTATCCTCTTATATATCTC+AGG | - | chr3_3:43266746-43266765 | Msa0453230:five_prime_UTR | 30.0% | |
| GGGGTAAAGAAATTCAATTG+TGG | + | chr3_3:43260879-43260898 | None:intergenic | 35.0% | |
| !!! | GATTTTTGGTGTATGCCAAA+AGG | - | chr3_3:43261111-43261130 | Msa0453230:three_prime_UTR | 35.0% |
| ! | AGCAATGCAAAAACACCTTT+TGG | + | chr3_3:43261129-43261148 | None:intergenic | 35.0% |
| TCTAATAGAAGATACTCCTC+GGG | - | chr3_3:43261217-43261236 | Msa0453230:three_prime_UTR | 35.0% | |
| TAGTGTCTACTTATGAAGCA+CGG | + | chr3_3:43261350-43261369 | None:intergenic | 35.0% | |
| TAACTGCACTGAAATGTGTT+TGG | - | chr3_3:43261403-43261422 | Msa0453230:intron | 35.0% | |
| TTTGTGGTTAATGGTTCCTA+TGG | - | chr3_3:43261532-43261551 | Msa0453230:intron | 35.0% | |
| TTCTACTGTCACTCTTCTTA+AGG | - | chr3_3:43261568-43261587 | Msa0453230:intron | 35.0% | |
| TAAGTAGTAAGTAGTAACCG+TGG | - | chr3_3:43261654-43261673 | Msa0453230:intron | 35.0% | |
| AAGTAGTAAGTAGTAACCGT+GGG | - | chr3_3:43261655-43261674 | Msa0453230:intron | 35.0% | |
| CGACACCCAGATTTAAATAA+AGG | + | chr3_3:43261775-43261794 | None:intergenic | 35.0% | |
| ! | ACTTGTGATTTGTAAGTTGC+AGG | - | chr3_3:43261873-43261892 | Msa0453230:intron | 35.0% |
| TATATACCTGGAATGGATGT+AGG | + | chr3_3:43262219-43262238 | None:intergenic | 35.0% | |
| ! | GAATGGATATGTTGGTTGAA+TGG | - | chr3_3:43262354-43262373 | Msa0453230:intron | 35.0% |
| !! | TTTCAATTTACCTCTGGAGT+TGG | + | chr3_3:43262396-43262415 | None:intergenic | 35.0% |
| ! | TAGCCAGTGTTGTTAAATAG+TGG | - | chr3_3:43262496-43262515 | Msa0453230:intron | 35.0% |
| TAGTGGTTATAGCATAGCAT+AGG | - | chr3_3:43262610-43262629 | Msa0453230:intron | 35.0% | |
| AGTGGTTATAGCATAGCATA+GGG | - | chr3_3:43262611-43262630 | Msa0453230:intron | 35.0% | |
| TCGCAGATTTCAGAAAATAG+CGG | + | chr3_3:43262815-43262834 | None:intergenic | 35.0% | |
| GAATATTACTTAGAGGGCAA+TGG | - | chr3_3:43262925-43262944 | Msa0453230:intron | 35.0% | |
| !!! | TATTTTTTGTCTCAACGCTC+TGG | - | chr3_3:43263072-43263091 | Msa0453230:intron | 35.0% |
| ! | GATTGCAATCAACTTCCTTT+TGG | + | chr3_3:43263136-43263155 | None:intergenic | 35.0% |
| ! | AAGGAAGTTGATTGCAATCA+TGG | - | chr3_3:43263137-43263156 | Msa0453230:intron | 35.0% |
| !! | TGTTTCAACAGGATTTGCTA+CGG | + | chr3_3:43263333-43263352 | None:intergenic | 35.0% |
| ! | GACTAGATTTTCCTTTTCTC+AGG | - | chr3_3:43263409-43263428 | Msa0453230:intron | 35.0% |
| ! | CTAGATTTTCCTTTTCTCAG+GGG | - | chr3_3:43263411-43263430 | Msa0453230:intron | 35.0% |
| TGAACTGAGGAAAGTTATGA+AGG | + | chr3_3:43263463-43263482 | None:intergenic | 35.0% | |
| AACTTTCCTCAGTTCATATG+AGG | - | chr3_3:43263467-43263486 | Msa0453230:intron | 35.0% | |
| GGTGCATTATAACTAATGCT+TGG | - | chr3_3:43263488-43263507 | Msa0453230:intron | 35.0% | |
| TTCTATACAAAGAGACAGAG+GGG | + | chr3_3:43263528-43263547 | None:intergenic | 35.0% | |
| GATTCTATACAAAGAGACAG+AGG | + | chr3_3:43263530-43263549 | None:intergenic | 35.0% | |
| GTTGATACAAAGAGGACATT+TGG | + | chr3_3:43263553-43263572 | None:intergenic | 35.0% | |
| ! | TCCGGTTTGATGATACAATT+AGG | - | chr3_3:43264070-43264089 | Msa0453230:intron | 35.0% |
| ! | GGTTTGATGATACAATTAGG+TGG | - | chr3_3:43264073-43264092 | Msa0453230:intron | 35.0% |
| GATATGACTGTAAATGCACA+TGG | - | chr3_3:43264101-43264120 | Msa0453230:intron | 35.0% | |
| ! | TAGGCATGGATGTGATTTTA+AGG | - | chr3_3:43264135-43264154 | Msa0453230:intron | 35.0% |
| ! | AGGCATGGATGTGATTTTAA+GGG | - | chr3_3:43264136-43264155 | Msa0453230:intron | 35.0% |
| !! | ATGTGATTTTAAGGGTAGCA+TGG | - | chr3_3:43264144-43264163 | Msa0453230:intron | 35.0% |
| TAGGTAGGTGTTTAGTGAAT+TGG | - | chr3_3:43264177-43264196 | Msa0453230:intron | 35.0% | |
| ! | TTGGTTGCTCGATTTTGTAA+TGG | - | chr3_3:43264278-43264297 | Msa0453230:intron | 35.0% |
| ! | TGGTTGCTCGATTTTGTAAT+GGG | - | chr3_3:43264279-43264298 | Msa0453230:intron | 35.0% |
| TTATTCGTTTCAGGAACAGA+TGG | - | chr3_3:43264389-43264408 | Msa0453230:intron | 35.0% | |
| AGTTCTCAAGAAAGAAGAAG+AGG | - | chr3_3:43264645-43264664 | Msa0453230:intron | 35.0% | |
| TCAAGAAAGAAGAAGAGGAA+AGG | - | chr3_3:43264650-43264669 | Msa0453230:intron | 35.0% | |
| !! | AAGTTTTATGCAGCAGTTTC+CGG | - | chr3_3:43264830-43264849 | Msa0453230:intron | 35.0% |
| AACAGTAAGATGACTACCTT+CGG | + | chr3_3:43264862-43264881 | None:intergenic | 35.0% | |
| TCGTTTGATGCATGTTCTTA+TGG | - | chr3_3:43265133-43265152 | Msa0453230:CDS | 35.0% | |
| GATTCTACTTAGGGATTTAC+AGG | + | chr3_3:43265357-43265376 | None:intergenic | 35.0% | |
| AAATAGCTCGAAGAAACACA+TGG | + | chr3_3:43265496-43265515 | None:intergenic | 35.0% | |
| TAACCATTTCATCTTTCTGC+AGG | - | chr3_3:43265617-43265636 | Msa0453230:intron | 35.0% | |
| ACTGGCCAAATATAAACACT+TGG | + | chr3_3:43265693-43265712 | None:intergenic | 35.0% | |
| AACTATGAGGGTTAGAACTT+GGG | + | chr3_3:43266091-43266110 | None:intergenic | 35.0% | |
| AATCAGAATGAGGCAAAATC+AGG | + | chr3_3:43266257-43266276 | None:intergenic | 35.0% | |
| TCTCAACTGTAAACCTGAAA+TGG | - | chr3_3:43266549-43266568 | Msa0453230:CDS | 35.0% | |
| ACTAATTGCTCCAAGTGATA+TGG | + | chr3_3:43266654-43266673 | None:intergenic | 35.0% | |
| GATAGTCCAATAGAAAGGAA+AGG | + | chr3_3:43266732-43266751 | None:intergenic | 35.0% | |
| AAGAGGATAGTCCAATAGAA+AGG | + | chr3_3:43266737-43266756 | None:intergenic | 35.0% | |
| TTGCACCTGAGATATATAAG+AGG | + | chr3_3:43266754-43266773 | None:intergenic | 35.0% | |
| ATGTGTGTCTGTGAGAAACA+GGG | + | chr3_3:43260762-43260781 | None:intergenic | 40.0% | |
| TATGTGTGTCTGTGAGAAAC+AGG | + | chr3_3:43260763-43260782 | None:intergenic | 40.0% | |
| !! | ATAAAAATGCGGAGGGTACT+TGG | - | chr3_3:43260914-43260933 | Msa0453230:three_prime_UTR | 40.0% |
| !! | TAAAAATGCGGAGGGTACTT+GGG | - | chr3_3:43260915-43260934 | Msa0453230:intron | 40.0% |
| GTTGTTCACCAATCGAACTA+TGG | - | chr3_3:43260949-43260968 | Msa0453230:intron | 40.0% | |
| ! | GTAATCATATGTGTCGGTGT+CGG | + | chr3_3:43261275-43261294 | None:intergenic | 40.0% |
| ! | GTTTGGTCGATCAAAAGTGT+TGG | - | chr3_3:43261420-43261439 | Msa0453230:intron | 40.0% |
| !!! | GGAAAGGCAAGGTTTTTTTG+TGG | - | chr3_3:43261516-43261535 | Msa0453230:intron | 40.0% |
| !! | GTTTGGTAGTGAAACTCTCA+TGG | - | chr3_3:43261620-43261639 | Msa0453230:intron | 40.0% |
| CATCTTGCAAAACCACAATG+CGG | + | chr3_3:43261720-43261739 | None:intergenic | 40.0% | |
| TGCAAGATGAAAAATTGCCG+TGG | - | chr3_3:43261731-43261750 | Msa0453230:intron | 40.0% | |
| ! | ATTTTATTCACCTCACTCCG+AGG | - | chr3_3:43261833-43261852 | Msa0453230:intron | 40.0% |
| !! | GCTATTTTCTGCTGCTAGAT+TGG | - | chr3_3:43261991-43262010 | Msa0453230:intron | 40.0% |
| TCCTAGTGAAAGAGAAGAGA+TGG | - | chr3_3:43262169-43262188 | Msa0453230:intron | 40.0% | |
| CCTAGTGAAAGAGAAGAGAT+GGG | - | chr3_3:43262170-43262189 | Msa0453230:intron | 40.0% | |
| AAGAGATGGGTGGTGTTTAA+GGG | - | chr3_3:43262183-43262202 | Msa0453230:intron | 40.0% | |
| AGATAGGGACAACTTTGTAG+CGG | - | chr3_3:43262688-43262707 | Msa0453230:CDS | 40.0% | |
| ! | GGAGTTTGTTCAGAAAACAG+TGG | - | chr3_3:43262709-43262728 | Msa0453230:CDS | 40.0% |
| AAATCTGCGATTGCTAACAC+TGG | - | chr3_3:43262825-43262844 | Msa0453230:CDS | 40.0% | |
| TCTTGCAGACTAAGGAAACA+AGG | - | chr3_3:43262964-43262983 | Msa0453230:intron | 40.0% | |
| AAGGAAACAAGGAATGCAGT+AGG | - | chr3_3:43262975-43262994 | Msa0453230:intron | 40.0% | |
| TAATCCGGAATTCGACCAAA+AGG | - | chr3_3:43263118-43263137 | Msa0453230:intron | 40.0% | |
| ! | ACTTCCTTTTGGTCGAATTC+CGG | + | chr3_3:43263125-43263144 | None:intergenic | 40.0% |
| GGATGTTCGATACCTCTAAT+AGG | + | chr3_3:43263371-43263390 | None:intergenic | 40.0% | |
| AATGCACCTCATATGAACTG+AGG | + | chr3_3:43263476-43263495 | None:intergenic | 40.0% | |
| !! | ATGGTGGTGCAACTTTTATG+AGG | + | chr3_3:43263627-43263646 | None:intergenic | 40.0% |
| TGTCCATATCTGTGCTTCAT+AGG | - | chr3_3:43263929-43263948 | Msa0453230:intron | 40.0% | |
| GTCCATATCTGTGCTTCATA+GGG | - | chr3_3:43263930-43263949 | Msa0453230:intron | 40.0% | |
| TCCATATCTGTGCTTCATAG+GGG | - | chr3_3:43263931-43263950 | Msa0453230:intron | 40.0% | |
| TCCATGTATCACTTCATCCT+TGG | - | chr3_3:43264016-43264035 | Msa0453230:intron | 40.0% | |
| ACCAAGGATGAAGTGATACA+TGG | + | chr3_3:43264020-43264039 | None:intergenic | 40.0% | |
| TATCACTTCATCCTTGGTGA+TGG | - | chr3_3:43264022-43264041 | Msa0453230:intron | 40.0% | |
| !! | GATTTTAAGGGTAGCATGGT+TGG | - | chr3_3:43264148-43264167 | Msa0453230:intron | 40.0% |
| ! | GGTTGCTCGATTTTGTAATG+GGG | - | chr3_3:43264280-43264299 | Msa0453230:intron | 40.0% |
| GTTTCAGGAACAGATGGAAT+TGG | - | chr3_3:43264395-43264414 | Msa0453230:intron | 40.0% | |
| ATGAGAACCATCTCATGCAA+CGG | + | chr3_3:43264548-43264567 | None:intergenic | 40.0% | |
| GGCACTTACTTTGTAGTTTG+TGG | - | chr3_3:43265200-43265219 | Msa0453230:intron | 40.0% | |
| ACTTGTGATTGTGTGTACTC+TGG | - | chr3_3:43265416-43265435 | Msa0453230:intron | 40.0% | |
| ! | TTGGAGTCTTTTGTTCTCTG+TGG | - | chr3_3:43265543-43265562 | Msa0453230:intron | 40.0% |
| ACTCCTGCAGAAAGATGAAA+TGG | + | chr3_3:43265623-43265642 | None:intergenic | 40.0% | |
| GAACTATGAGGGTTAGAACT+TGG | + | chr3_3:43266092-43266111 | None:intergenic | 40.0% | |
| ! | TCAGGTGCATCTTTTAAACC+TGG | - | chr3_3:43266180-43266199 | Msa0453230:intron | 40.0% |
| ! | CATCTTTTAAACCTGGAACC+TGG | - | chr3_3:43266187-43266206 | Msa0453230:intron | 40.0% |
| TGAGGCAAAATCAGGAATGT+TGG | + | chr3_3:43266249-43266268 | None:intergenic | 40.0% | |
| ! | ACGGTTTTCGAATCAGAATG+AGG | + | chr3_3:43266267-43266286 | None:intergenic | 40.0% |
| TGGTCATATTCGTCGAACAA+AGG | + | chr3_3:43266375-43266394 | None:intergenic | 40.0% | |
| ! | AGGGTACTTGGGAAGATTAC+TGG | - | chr3_3:43260926-43260945 | Msa0453230:intron | 45.0% |
| GGGTACTTGGGAAGATTACT+GGG | - | chr3_3:43260927-43260946 | Msa0453230:intron | 45.0% | |
| TTCACCAATCGAACTATGGC+TGG | - | chr3_3:43260953-43260972 | Msa0453230:intron | 45.0% | |
| ATGGCTGGTGTGGATAAAAC+TGG | - | chr3_3:43260968-43260987 | Msa0453230:intron | 45.0% | |
| TGGCTGGTGTGGATAAAACT+GGG | - | chr3_3:43260969-43260988 | Msa0453230:intron | 45.0% | |
| ATAGGTGTCTACGACGTATC+AGG | + | chr3_3:43261182-43261201 | None:intergenic | 45.0% | |
| TAGAAGATACTCCTCGGGTT+AGG | - | chr3_3:43261222-43261241 | Msa0453230:three_prime_UTR | 45.0% | |
| TGTTATCGCTGTCAACGTGT+CGG | - | chr3_3:43261315-43261334 | Msa0453230:CDS | 45.0% | |
| TAAATGCTGAGCTTGGAGAC+TGG | - | chr3_3:43261491-43261510 | Msa0453230:intron | 45.0% | |
| AAGTAGTAACCGTGGGTGTT+TGG | - | chr3_3:43261662-43261681 | Msa0453230:intron | 45.0% | |
| CTCAATTCTCCAAACACCCA+CGG | + | chr3_3:43261674-43261693 | None:intergenic | 45.0% | |
| !! | ATTCAATAGGGTTGGCCAAG+TGG | + | chr3_3:43261908-43261927 | None:intergenic | 45.0% |
| CCCATCTCTTCTCTTTCACT+AGG | + | chr3_3:43262173-43262192 | None:intergenic | 45.0% | |
| AGTGAAAGAGAAGAGATGGG+TGG | - | chr3_3:43262173-43262192 | Msa0453230:intron | 45.0% | |
| GAAGAGATGGGTGGTGTTTA+AGG | - | chr3_3:43262182-43262201 | Msa0453230:intron | 45.0% | |
| CATGATCCTACATCCATTCC+AGG | - | chr3_3:43262210-43262229 | Msa0453230:intron | 45.0% | |
| GTTGAATGGGCAGCGTAAAA+GGG | - | chr3_3:43262368-43262387 | Msa0453230:intron | 45.0% | |
| CACTAGTCACTACTGAGTAG+CGG | - | chr3_3:43262777-43262796 | Msa0453230:intron | 45.0% | |
| GGTCGAATTCCGGATTACTA+GGG | + | chr3_3:43263115-43263134 | None:intergenic | 45.0% | |
| TGGTCGAATTCCGGATTACT+AGG | + | chr3_3:43263116-43263135 | None:intergenic | 45.0% | |
| !! | TTCAACAGGATTTGCTACGG+TGG | + | chr3_3:43263330-43263349 | None:intergenic | 45.0% |
| !! | TTAGAGGTATCGAACATCCG+TGG | - | chr3_3:43263372-43263391 | Msa0453230:intron | 45.0% |
| TATCGAACATCCGTGGCATT+AGG | - | chr3_3:43263379-43263398 | Msa0453230:intron | 45.0% | |
| GTCAGACTTACCTAATGCCA+CGG | + | chr3_3:43263392-43263411 | None:intergenic | 45.0% | |
| ! | CAAGTTGAAGAATTCGCCCA+TGG | - | chr3_3:43263590-43263609 | Msa0453230:intron | 45.0% |
| TGAGGTCACAGTCAATCCAT+GGG | + | chr3_3:43263609-43263628 | None:intergenic | 45.0% | |
| ATGAGGTCACAGTCAATCCA+TGG | + | chr3_3:43263610-43263629 | None:intergenic | 45.0% | |
| !! | TGCAATGCTTTGGGGATGTT+TGG | - | chr3_3:43263712-43263731 | Msa0453230:intron | 45.0% |
| !! | TATATGTGTCGGTGTCGTGT+CGG | + | chr3_3:43263850-43263869 | None:intergenic | 45.0% |
| TCCCCTATGAAGCACAGATA+TGG | + | chr3_3:43263935-43263954 | None:intergenic | 45.0% | |
| !! | TCATCCTTGGTGATGGTCAT+CGG | - | chr3_3:43264029-43264048 | Msa0453230:intron | 45.0% |
| GACTGTAAATGCACATGGGT+TGG | - | chr3_3:43264106-43264125 | Msa0453230:intron | 45.0% | |
| GTAGCATGGTTGGAGACATT+AGG | - | chr3_3:43264158-43264177 | Msa0453230:intron | 45.0% | |
| CATGGTTGGAGACATTAGGT+AGG | - | chr3_3:43264162-43264181 | Msa0453230:intron | 45.0% | |
| TTTGTTGCCGTTGCATGAGA+TGG | - | chr3_3:43264538-43264557 | Msa0453230:intron | 45.0% | |
| GAGGAAAGGAAAGCCAAAGA+AGG | - | chr3_3:43264664-43264683 | Msa0453230:intron | 45.0% | |
| CCTGACTCTACTTCCTTCTT+TGG | + | chr3_3:43264680-43264699 | None:intergenic | 45.0% | |
| CCAAAGAAGGAAGTAGAGTC+AGG | - | chr3_3:43264677-43264696 | Msa0453230:intron | 45.0% | |
| TCCATTGTAGGAAACGCTAG+TGG | - | chr3_3:43264795-43264814 | Msa0453230:intron | 45.0% | |
| ACCACTAGCGTTTCCTACAA+TGG | + | chr3_3:43264799-43264818 | None:intergenic | 45.0% | |
| TGACTACCTTCGGAAGAAAC+CGG | + | chr3_3:43264852-43264871 | None:intergenic | 45.0% | |
| AACGAGGTTGAAGAATCACC+TGG | - | chr3_3:43265053-43265072 | Msa0453230:intron | 45.0% | |
| TTGAAGAATCACCTGGCACA+AGG | - | chr3_3:43265060-43265079 | Msa0453230:intron | 45.0% | |
| TGAAGAATCACCTGGCACAA+GGG | - | chr3_3:43265061-43265080 | Msa0453230:intron | 45.0% | |
| TTTGTGCGTGTGTCTGTGTT+CGG | + | chr3_3:43265170-43265189 | None:intergenic | 45.0% | |
| ACACGCACAAAAGCTCTTGT+TGG | - | chr3_3:43265179-43265198 | Msa0453230:intron | 45.0% | |
| !! | CAGGAATGTTGGTGTCAGTA+AGG | + | chr3_3:43266238-43266257 | None:intergenic | 45.0% |
| ! | AACGCGTCAAGTTGTCATTG+TGG | + | chr3_3:43266395-43266414 | None:intergenic | 45.0% |
| TACAGTTGAGACTCAGGCAA+GGG | + | chr3_3:43266540-43266559 | None:intergenic | 45.0% | |
| TTACAGTTGAGACTCAGGCA+AGG | + | chr3_3:43266541-43266560 | None:intergenic | 45.0% | |
| CAGGTTTACAGTTGAGACTC+AGG | + | chr3_3:43266546-43266565 | None:intergenic | 45.0% | |
| !!! | TTTATTTATTTATTTTATTG+GGG | + | chr3_3:43260899-43260918 | None:intergenic | 5.0% |
| !! | AAAATAAATAAATAAAAATG+CGG | - | chr3_3:43260903-43260922 | Msa0453230:three_prime_UTR | 5.0% |
| !!! | ATCATAAATAAAATTATTTT+TGG | - | chr3_3:43264569-43264588 | Msa0453230:intron | 5.0% |
| !!! | AATTTTTTTTTTTTTTTTGA+AGG | - | chr3_3:43265885-43265904 | Msa0453230:intron | 5.0% |
| GTGGTACAGTGACAGCATCA+TGG | + | chr3_3:43260860-43260879 | None:intergenic | 50.0% | |
| CACACCAGCCATAGTTCGAT+TGG | + | chr3_3:43260960-43260979 | None:intergenic | 50.0% | |
| CAATCGAACTATGGCTGGTG+TGG | - | chr3_3:43260958-43260977 | Msa0453230:intron | 50.0% | |
| CGTGGGTGTTTGGAGAATTG+AGG | - | chr3_3:43261672-43261691 | Msa0453230:intron | 50.0% | |
| CCACAATGCGGACGAGATTA+AGG | + | chr3_3:43261708-43261727 | None:intergenic | 50.0% | |
| CCTTAATCTCGTCCGCATTG+TGG | - | chr3_3:43261705-43261724 | Msa0453230:intron | 50.0% | |
| AATTGCCGTGGCTCAAATCG+CGG | - | chr3_3:43261743-43261762 | Msa0453230:intron | 50.0% | |
| TCAAACCCCCACTATCTCCT+CGG | + | chr3_3:43261853-43261872 | None:intergenic | 50.0% | |
| ! | TGCAGGTGTTATGCTCCACT+TGG | - | chr3_3:43261890-43261909 | Msa0453230:intron | 50.0% |
| GGTTGAATGGGCAGCGTAAA+AGG | - | chr3_3:43262367-43262386 | Msa0453230:intron | 50.0% | |
| TAAAAGGGCTCCAACTCCAG+AGG | - | chr3_3:43262383-43262402 | Msa0453230:intron | 50.0% | |
| ! | TCTCAACGCTCTGGTTCCTA+TGG | - | chr3_3:43263081-43263100 | Msa0453230:intron | 50.0% |
| ! | CTCAACGCTCTGGTTCCTAT+GGG | - | chr3_3:43263082-43263101 | Msa0453230:intron | 50.0% |
| ! | GCTCTGGTTCCTATGGGAAA+GGG | - | chr3_3:43263088-43263107 | Msa0453230:CDS | 50.0% |
| TACTAGGGTCCCTTTCCCAT+AGG | + | chr3_3:43263100-43263119 | None:intergenic | 50.0% | |
| GGAAAGGGACCCTAGTAATC+CGG | - | chr3_3:43263103-43263122 | Msa0453230:CDS | 50.0% | |
| GCTTGAGATCCCCTGAGAAA+AGG | + | chr3_3:43263423-43263442 | None:intergenic | 50.0% | |
| AGCCCCTTCTTGCTTAACGA+AGG | - | chr3_3:43263663-43263682 | Msa0453230:intron | 50.0% | |
| GCCCCTTCTTGCTTAACGAA+GGG | - | chr3_3:43263664-43263683 | Msa0453230:intron | 50.0% | |
| CCCCTTCGTTAAGCAAGAAG+GGG | + | chr3_3:43263668-43263687 | None:intergenic | 50.0% | |
| CCCCTTCTTGCTTAACGAAG+GGG | - | chr3_3:43263665-43263684 | Msa0453230:intron | 50.0% | |
| CCCCCTTCGTTAAGCAAGAA+GGG | + | chr3_3:43263669-43263688 | None:intergenic | 50.0% | |
| CCCTTCTTGCTTAACGAAGG+GGG | - | chr3_3:43263666-43263685 | Msa0453230:intron | 50.0% | |
| TCCCCCTTCGTTAAGCAAGA+AGG | + | chr3_3:43263670-43263689 | None:intergenic | 50.0% | |
| TGCTTAACGAAGGGGGACAA+TGG | - | chr3_3:43263673-43263692 | Msa0453230:intron | 50.0% | |
| GCTTAACGAAGGGGGACAAT+GGG | - | chr3_3:43263674-43263693 | Msa0453230:intron | 50.0% | |
| ACATGTTCGACACTGGGACA+CGG | + | chr3_3:43263814-43263833 | None:intergenic | 50.0% | |
| CACGACACATGTTCGACACT+GGG | + | chr3_3:43263820-43263839 | None:intergenic | 50.0% | |
| ACACGACACATGTTCGACAC+TGG | + | chr3_3:43263821-43263840 | None:intergenic | 50.0% | |
| GCTTCATAGGGGAGACTTGA+AGG | - | chr3_3:43263942-43263961 | Msa0453230:intron | 50.0% | |
| TCAACCGATGACCATCACCA+AGG | + | chr3_3:43264036-43264055 | None:intergenic | 50.0% | |
| !! | GCACATGGGTTGGACTTTGT+AGG | - | chr3_3:43264116-43264135 | Msa0453230:intron | 50.0% |
| ! | TGGGTTGGACTTTGTAGGCA+TGG | - | chr3_3:43264121-43264140 | Msa0453230:intron | 50.0% |
| CAGTTTCCGGTTTCTTCCGA+AGG | - | chr3_3:43264843-43264862 | Msa0453230:intron | 50.0% | |
| CACAAGGGATGACTTGAGGT+TGG | - | chr3_3:43265076-43265095 | Msa0453230:intron | 50.0% | |
| TGTGTCTGTGTTCGGAGTGA+GGG | + | chr3_3:43265162-43265181 | None:intergenic | 50.0% | |
| TTCAGGACTTCAGAGCCAAC+TGG | - | chr3_3:43266156-43266175 | Msa0453230:intron | 50.0% | |
| TCAGGACTTCAGAGCCAACT+GGG | - | chr3_3:43266157-43266176 | Msa0453230:intron | 50.0% | |
| AAAGATGCACCTGACCCAGT+TGG | + | chr3_3:43266174-43266193 | None:intergenic | 50.0% | |
| AAGGTCCTCCCAGATCAAGT+TGG | + | chr3_3:43266219-43266238 | None:intergenic | 50.0% | |
| CAAAGGTGACCTTGCAAGCA+AGG | - | chr3_3:43266513-43266532 | Msa0453230:CDS | 50.0% | |
| TATCTGACACGCCTAACCCG+AGG | + | chr3_3:43261236-43261255 | None:intergenic | 55.0% | |
| ATGCTGAGCTTGGAGACTGG+TGG | - | chr3_3:43261494-43261513 | Msa0453230:intron | 55.0% | |
| TGCTGAGCTTGGAGACTGGT+GGG | - | chr3_3:43261495-43261514 | Msa0453230:intron | 55.0% | |
| AGCTTGGAGACTGGTGGGAA+AGG | - | chr3_3:43261500-43261519 | Msa0453230:intron | 55.0% | |
| ACCTCACTCCGAGGAGATAG+TGG | - | chr3_3:43261842-43261861 | Msa0453230:intron | 55.0% | |
| CCTCACTCCGAGGAGATAGT+GGG | - | chr3_3:43261843-43261862 | Msa0453230:intron | 55.0% | |
| CTCACTCCGAGGAGATAGTG+GGG | - | chr3_3:43261844-43261863 | Msa0453230:intron | 55.0% | |
| ! | TCACTCCGAGGAGATAGTGG+GGG | - | chr3_3:43261845-43261864 | Msa0453230:intron | 55.0% |
| ! | CGCTCTGGTTCCTATGGGAA+AGG | - | chr3_3:43263087-43263106 | Msa0453230:CDS | 55.0% |
| CTCAAGTCATCCCTTGTGCC+AGG | + | chr3_3:43265074-43265093 | None:intergenic | 55.0% | |
| CTGGCACAAGGGATGACTTG+AGG | - | chr3_3:43265072-43265091 | Msa0453230:intron | 55.0% | |
| GTGTGTCTGTGTTCGGAGTG+AGG | + | chr3_3:43265163-43265182 | None:intergenic | 55.0% | |
| ACTTCAGAGCCAACTGGGTC+AGG | - | chr3_3:43266162-43266181 | Msa0453230:intron | 55.0% | |
| !! | AGATCAAGTTGGAGGCTGCC+AGG | + | chr3_3:43266208-43266227 | None:intergenic | 55.0% |
| TGGCAGCCTCCAACTTGATC+TGG | - | chr3_3:43266207-43266226 | Msa0453230:intron | 55.0% | |
| GGCAGCCTCCAACTTGATCT+GGG | - | chr3_3:43266208-43266227 | Msa0453230:intron | 55.0% | |
| AGCCTCCAACTTGATCTGGG+AGG | - | chr3_3:43266211-43266230 | Msa0453230:intron | 55.0% | |
| !! | GTCCTCCCAGATCAAGTTGG+AGG | + | chr3_3:43266216-43266235 | None:intergenic | 55.0% |
| GGAGACTGGTGGGAAAGGCA+AGG | - | chr3_3:43261505-43261524 | Msa0453230:intron | 60.0% | |
| CCTGACCGCGATTTGAGCCA+CGG | + | chr3_3:43261751-43261770 | None:intergenic | 60.0% | |
| CCCACTATCTCCTCGGAGTG+AGG | + | chr3_3:43261846-43261865 | None:intergenic | 60.0% | |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | + | chr3_3:43263844-43263863 | None:intergenic | 60.0% |
| GTCAGGCGTGTCGTCAACAC+TGG | - | chr3_3:43264694-43264713 | Msa0453230:intron | 60.0% | |
| GGCAAGGGTCCTTGCTTGCA+AGG | + | chr3_3:43266525-43266544 | None:intergenic | 60.0% | |
| CCGTGGCTCAAATCGCGGTC+AGG | - | chr3_3:43261748-43261767 | Msa0453230:intron | 65.0% | |
| GTTGGAGGCTGCCAGGTTCC+AGG | + | chr3_3:43266201-43266220 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 43260724 | 43266812 | 43260724 | ID=Msa0453230;Name=Msa0453230 |
| chr3_3 | mRNA | 43260724 | 43266812 | 43260724 | ID=Msa0453230-mRNA-1;Parent=Msa0453230;Name=Msa0453230-mRNA-1;_AED=0.39;_eAED=0.39;_QI=196|0.87|1|1|0.87|0.77|9|515|169 |
| chr3_3 | exon | 43260724 | 43260933 | 43260724 | ID=Msa0453230-mRNA-1:exon:7901;Parent=Msa0453230-mRNA-1 |
| chr3_3 | exon | 43261007 | 43261375 | 43261007 | ID=Msa0453230-mRNA-1:exon:7900;Parent=Msa0453230-mRNA-1 |
| chr3_3 | exon | 43262443 | 43262485 | 43262443 | ID=Msa0453230-mRNA-1:exon:7899;Parent=Msa0453230-mRNA-1 |
| chr3_3 | exon | 43262672 | 43262731 | 43262672 | ID=Msa0453230-mRNA-1:exon:7898;Parent=Msa0453230-mRNA-1 |
| chr3_3 | exon | 43262821 | 43262889 | 43262821 | ID=Msa0453230-mRNA-1:exon:7897;Parent=Msa0453230-mRNA-1 |
| chr3_3 | exon | 43263083 | 43263134 | 43263083 | ID=Msa0453230-mRNA-1:exon:7896;Parent=Msa0453230-mRNA-1 |
| chr3_3 | exon | 43265132 | 43265184 | 43265132 | ID=Msa0453230-mRNA-1:exon:7895;Parent=Msa0453230-mRNA-1 |
| chr3_3 | exon | 43265305 | 43265361 | 43265305 | ID=Msa0453230-mRNA-1:exon:7894;Parent=Msa0453230-mRNA-1 |
| chr3_3 | exon | 43266505 | 43266812 | 43266505 | ID=Msa0453230-mRNA-1:exon:7893;Parent=Msa0453230-mRNA-1 |
| chr3_3 | five_prime_UTR | 43266617 | 43266812 | 43266617 | ID=Msa0453230-mRNA-1:five_prime_utr;Parent=Msa0453230-mRNA-1 |
| chr3_3 | CDS | 43266505 | 43266616 | 43266505 | ID=Msa0453230-mRNA-1:cds;Parent=Msa0453230-mRNA-1 |
| chr3_3 | CDS | 43265305 | 43265361 | 43265305 | ID=Msa0453230-mRNA-1:cds;Parent=Msa0453230-mRNA-1 |
| chr3_3 | CDS | 43265132 | 43265184 | 43265132 | ID=Msa0453230-mRNA-1:cds;Parent=Msa0453230-mRNA-1 |
| chr3_3 | CDS | 43263083 | 43263134 | 43263083 | ID=Msa0453230-mRNA-1:cds;Parent=Msa0453230-mRNA-1 |
| chr3_3 | CDS | 43262821 | 43262889 | 43262821 | ID=Msa0453230-mRNA-1:cds;Parent=Msa0453230-mRNA-1 |
| chr3_3 | CDS | 43262672 | 43262731 | 43262672 | ID=Msa0453230-mRNA-1:cds;Parent=Msa0453230-mRNA-1 |
| chr3_3 | CDS | 43262443 | 43262485 | 43262443 | ID=Msa0453230-mRNA-1:cds;Parent=Msa0453230-mRNA-1 |
| chr3_3 | CDS | 43261312 | 43261375 | 43261312 | ID=Msa0453230-mRNA-1:cds;Parent=Msa0453230-mRNA-1 |
| chr3_3 | three_prime_UTR | 43261007 | 43261311 | 43261007 | ID=Msa0453230-mRNA-1:three_prime_utr;Parent=Msa0453230-mRNA-1 |
| chr3_3 | three_prime_UTR | 43260724 | 43260933 | 43260724 | ID=Msa0453230-mRNA-1:three_prime_utr;Parent=Msa0453230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
