AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1005820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1005820 MtrunA17_Chr7g0215791 94.348 920 47 3 1 916 39 957 0.0 1710
Msa1005820 MtrunA17_Chr4g0055841 32.117 274 129 7 27 293 33 256 1.29e-26 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1005820 AT3G60380.1 36.201 279 126 14 47 320 51 282 1.24e-28 123
Msa1005820 AT4G16790.1 46.018 113 39 4 17 110 9 118 9.90e-18 87.8

Find 193 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGAATTCTGATGATAATTT+TGG 0.153084 7_1:-3842923 Msa1005820:CDS
GGTAAATATTTCAATGAAAA+TGG 0.170433 7_1:-3842701 Msa1005820:CDS
GTGAGTGAAGATAGGGAATT+TGG 0.171279 7_1:-3842632 Msa1005820:CDS
TTTCTCATCCTTCGCATTTC+AGG 0.172291 7_1:-3841575 Msa1005820:CDS
CAAATTAGGCTTCAGAAAAT+TGG 0.181564 7_1:-3840718 Msa1005820:CDS
CTCCCATAACTTGGTGAGTA+TGG 0.203790 7_1:+3843225 None:intergenic
GGAAATGGATCCTTCGAATT+TGG 0.209241 7_1:-3842609 Msa1005820:CDS
ATTGGCATTGTTGTTGCTTA+TGG 0.216714 7_1:-3843184 Msa1005820:CDS
GGAAACATGCTGCACATTTA+AGG 0.232974 7_1:-3842040 Msa1005820:CDS
TCCACACTCTTTGATGGTTC+TGG 0.237883 7_1:+3840874 None:intergenic
CGGTTTCCAAGTGGAAGATT+TGG 0.247884 7_1:-3841727 Msa1005820:CDS
AATGGAAGTGATTCGAGTTT+AGG 0.267445 7_1:-3842683 Msa1005820:CDS
ACCGGTTCGAAGTTTGAAAT+TGG 0.270312 7_1:-3842747 Msa1005820:CDS
AATCCGCTGCAGGAAGGTTT+AGG 0.273976 7_1:-3841420 Msa1005820:CDS
TGAGTTTCATCAACAGATAT+TGG 0.296093 7_1:+3841552 None:intergenic
ATGGAAAGGGAGAAAGTTTA+TGG 0.296203 7_1:-3842503 Msa1005820:CDS
AAGATTTCTCAGGTGTCTTC+AGG 0.298935 7_1:-3841636 Msa1005820:CDS
TCTGAATATGTCAATGATTC+AGG 0.305872 7_1:-3840796 Msa1005820:CDS
CGCAAATGGGGTTTCGAGAT+TGG 0.308229 7_1:+3843376 None:intergenic
AAGTCTTCCACACTCTTTGA+TGG 0.315244 7_1:+3840868 None:intergenic
AGAGCCAGTGGATTGCCTTC+AGG 0.329099 7_1:-3841108 Msa1005820:CDS
TGAGTGAAGATAGGGAATTT+GGG 0.332634 7_1:-3842631 Msa1005820:CDS
GAATTTCCATGAGATGGATT+TGG 0.336254 7_1:-3841664 Msa1005820:CDS
AAAGTTTATGGCAATGATAA+TGG 0.342619 7_1:-3842491 Msa1005820:CDS
TTCGCAGTTTAGGCCTCTTT+CGG 0.342647 7_1:-3842465 Msa1005820:CDS
AAATTCATATCTTCAGAAAA+AGG 0.344657 7_1:+3841681 None:intergenic
AGGATTCAAAGAAGAGATTC+GGG 0.347970 7_1:-3842116 Msa1005820:CDS
GGTTGGATGTGAGTGAAGAT+AGG 0.353006 7_1:-3842640 Msa1005820:CDS
CACCTTCATCTTCGGCTAGA+AGG 0.353682 7_1:-3841341 Msa1005820:CDS
AACGAAACCTCATCATGATT+TGG 0.365971 7_1:+3840922 None:intergenic
TTCGGAAAATATGAATTTCC+AGG 0.367259 7_1:-3841841 Msa1005820:CDS
TCATAAACCTCTCGGATTAC+CGG 0.367581 7_1:-3842765 Msa1005820:CDS
ATCCGCTGCAGGAAGGTTTA+GGG 0.369848 7_1:-3841419 Msa1005820:CDS
GCAAATGGGGTTTCGAGATT+GGG 0.376529 7_1:+3843377 None:intergenic
GGTTTCCAAGTGGAAGATTT+GGG 0.381927 7_1:-3841726 Msa1005820:CDS
TTCAAGTTCACCTTCATCTT+CGG 0.382503 7_1:-3841349 Msa1005820:CDS
GAACAAATGTGGTTCAATCT+TGG 0.382568 7_1:-3842868 Msa1005820:CDS
CCAGGTTCAAAGCTCAAATT+AGG 0.386811 7_1:-3840732 Msa1005820:CDS
ATAATGGTTCTTCGCAGTTT+AGG 0.387328 7_1:-3842475 Msa1005820:CDS
AAGGATTCAAAGAAGAGATT+CGG 0.388441 7_1:-3842117 Msa1005820:CDS
AGAATAAGATGATGCATTGT+TGG 0.390686 7_1:-3843021 Msa1005820:CDS
AGATAGGGAATTTGGGGAAA+TGG 0.394135 7_1:-3842624 Msa1005820:CDS
GGATTCCTATGTGCCTGCTT+TGG 0.394775 7_1:-3842240 Msa1005820:CDS
CTTCTCCTTCGCCTATTGAC+TGG 0.400771 7_1:-3842544 Msa1005820:CDS
ACCAATTTCAAACTTCGAAC+CGG 0.402025 7_1:+3842746 None:intergenic
TCTTTGGTGACAACAATGTT+AGG 0.406561 7_1:-3840666 Msa1005820:CDS
AACCCATACTCACCAAGTTA+TGG 0.407274 7_1:-3843228 Msa1005820:CDS
AATGAAACGATTGAACTTAG+AGG 0.411541 7_1:-3841612 Msa1005820:CDS
AAATGGCTGCAATGAAGTTT+CGG 0.412708 7_1:+3841314 None:intergenic
ACCCATACTCACCAAGTTAT+GGG 0.418982 7_1:-3843227 Msa1005820:CDS
GAATTTCCAAGAGGAAGATA+TGG 0.421942 7_1:-3841790 Msa1005820:CDS
TGTGCTCCATATCTTCCTCT+TGG 0.423735 7_1:+3841784 None:intergenic
TGGGGTTTCGAGATTGGGAT+TGG 0.426577 7_1:+3843382 None:intergenic
TTTGTTCCACAACTTCCTCT+TGG 0.428444 7_1:+3841886 None:intergenic
CGCCTATTGACTGGAATTCG+AGG 0.430155 7_1:-3842535 Msa1005820:CDS
GAGCCAGTGGATTGCCTTCA+GGG 0.430324 7_1:-3841107 Msa1005820:CDS
GACTTCCCCTTTGCATACTT+CGG 0.437419 7_1:-3841859 Msa1005820:CDS
TTTAATGATGCTGCTGTTGA+TGG 0.438444 7_1:-3842578 Msa1005820:CDS
AACAAAAGAATGGGTACTAA+AGG 0.441078 7_1:-3842062 Msa1005820:CDS
TAATCTGAATGATGGCTTCA+AGG 0.444395 7_1:-3841262 Msa1005820:CDS
TTCACGGTCTTTGCAGTCTG+TGG 0.446276 7_1:-3841514 Msa1005820:CDS
GTTGATGAGACTAAGTTTGA+AGG 0.446350 7_1:-3842443 Msa1005820:CDS
ACCGCAGGCGAGGATCCACC+TGG 0.451847 7_1:-3841228 Msa1005820:CDS
CATTCAACATTACCAAAGTA+AGG 0.454251 7_1:+3842803 None:intergenic
AACTTGAATCACGTATTTCA+CGG 0.455012 7_1:-3841530 Msa1005820:CDS
GTCTAGCAAAAGCTCTATCA+AGG 0.459498 7_1:-3841152 Msa1005820:CDS
ATTGACTGGAATTCGAGGTT+TGG 0.461403 7_1:-3842530 Msa1005820:CDS
ATCAAAGAGTGTGGAAGACT+TGG 0.462435 7_1:-3840866 Msa1005820:CDS
GGTGATGCATGGTTTGCATT+CGG 0.464325 7_1:-3841193 Msa1005820:CDS
GAGGCGTTCTTCTAAGAGGT+TGG 0.470996 7_1:-3842657 Msa1005820:CDS
CCTAATTTGAGCTTTGAACC+TGG 0.471755 7_1:+3840732 None:intergenic
GTTGCTGTATCAACATTATC+CGG 0.475864 7_1:+3841024 None:intergenic
ACAAAAGAATGGGTACTAAA+GGG 0.484475 7_1:-3842061 Msa1005820:CDS
TTTGGCGACAAAGATTTCTC+AGG 0.486752 7_1:-3841646 Msa1005820:CDS
GTTGTTGCTCAACCTTACTT+TGG 0.489447 7_1:-3842815 Msa1005820:CDS
AATCAGATCTTCTATTCAAA+GGG 0.490078 7_1:-3840975 Msa1005820:CDS
GAATTCGAGGTTTGGAAGGA+TGG 0.490098 7_1:-3842522 Msa1005820:CDS
TTCTTTAAGAAACAAAAGAA+TGG 0.490619 7_1:-3842072 Msa1005820:CDS
GTGAAGAAGCTCCCATAACT+TGG 0.491959 7_1:+3843216 None:intergenic
TTCTGATGAAACAGAATCTA+CGG 0.492039 7_1:+3841449 None:intergenic
AGATATGAATTTCCATGAGA+TGG 0.492777 7_1:-3841670 Msa1005820:CDS
GAGACTAAGTTTGAAGGACT+TGG 0.494783 7_1:-3842437 Msa1005820:CDS
TCACAGTCTTTCCAGTCGAC+AGG 0.495798 7_1:-3841975 Msa1005820:CDS
GTGATTCGAGTTTAGGTTCG+AGG 0.496075 7_1:-3842676 Msa1005820:CDS
TTAGTCTCATCAACCGAAAG+AGG 0.499913 7_1:+3842452 None:intergenic
AAGTATGCATATCTTCCTCC+TGG 0.500568 7_1:+3841823 None:intergenic
GTTGGATGTGAGTGAAGATA+GGG 0.500698 7_1:-3842639 Msa1005820:CDS
CAACAATGCCAATGAAAAGA+AGG 0.500909 7_1:+3843194 None:intergenic
AATTGTTTCTCCAAATTCGA+AGG 0.501586 7_1:+3842599 None:intergenic
GTTGAATGTGGCGAGGTTGT+TGG 0.503026 7_1:-3842788 Msa1005820:CDS
GAGGTTTGGAAGGATGGAAA+GGG 0.503693 7_1:-3842516 Msa1005820:CDS
AAGAAGAGATTCGGGGAAGA+AGG 0.503884 7_1:-3842108 Msa1005820:CDS
GAATCAGATCTTCTATTCAA+AGG 0.504619 7_1:-3840976 Msa1005820:CDS
TTTGTCCCAAATCTTCCACT+TGG 0.505382 7_1:+3841721 None:intergenic
ATGATGCATTGTTGGAATGA+TGG 0.506708 7_1:-3843013 Msa1005820:CDS
CAATCTCGAAACCCCATTTG+CGG 0.509692 7_1:-3843375 Msa1005820:CDS
CATCTTCAACTGAGCTACCC+TGG 0.511679 7_1:+3840824 None:intergenic
TCTTTAAGAAACAAAAGAAT+GGG 0.511855 7_1:-3842071 Msa1005820:CDS
AAATCATGATGAGGTTTCGT+TGG 0.512566 7_1:-3840920 Msa1005820:CDS
AGAAAATATGAATCCGCTGC+AGG 0.514221 7_1:-3841430 Msa1005820:CDS
TCGTGTAGCAAGCTAACAAA+TGG 0.514352 7_1:+3841297 None:intergenic
GGATCAATTGAAAGATCAAA+GGG 0.515027 7_1:-3840697 Msa1005820:CDS
TCACGGTCTTTGCAGTCTGT+GGG 0.516041 7_1:-3841513 Msa1005820:CDS
TAGCAAGCAAGCCGATGAAA+AGG 0.516544 7_1:-3841061 Msa1005820:CDS
CGAGGTTTGGAAGGATGGAA+AGG 0.516878 7_1:-3842517 Msa1005820:CDS
TAACAAGCTTGAGAGCCTCC+AGG 0.518168 7_1:-3840842 Msa1005820:CDS
ATATGTCAATGATTCAGGAT+TGG 0.521804 7_1:-3840791 Msa1005820:CDS
GCATCGGATAATATCAATAC+GGG 0.522599 7_1:-3842296 Msa1005820:CDS
AATCTGAATGATGGCTTCAA+GGG 0.525413 7_1:-3841261 Msa1005820:CDS
TGGATCAATTGAAAGATCAA+AGG 0.525605 7_1:-3840698 Msa1005820:CDS
TTGTCGCCAAATCCATCTCA+TGG 0.527693 7_1:+3841658 None:intergenic
GTTCGAGGCGTTCTTCTAAG+AGG 0.528027 7_1:-3842661 Msa1005820:CDS
GGGGAAAAGAAGAGCTTGCA+TGG 0.528358 7_1:-3841399 Msa1005820:CDS
TTCGTTTGATTCGATTGCAT+CGG 0.529575 7_1:-3842312 Msa1005820:CDS
TCCCATAACTTGGTGAGTAT+GGG 0.529608 7_1:+3843226 None:intergenic
GATGGCTTCAAGGGTAAAAG+TGG 0.530296 7_1:-3841252 Msa1005820:CDS
TGAGTTTCATCAACAGACAT+TGG 0.534052 7_1:+3842017 None:intergenic
GTTTGCATTCGGACTCAGAC+AGG 0.534931 7_1:-3841182 Msa1005820:CDS
AAGCTAGTGAATTTATCGCC+AGG 0.536727 7_1:-3840750 Msa1005820:CDS
TCCCCTAAACCTTCCTGCAG+CGG 0.539101 7_1:+3841417 None:intergenic
TGCATCGGATAATATCAATA+CGG 0.539163 7_1:-3842297 Msa1005820:CDS
TGAAGAAGACGAAGAAGAAG+AGG 0.540768 7_1:+3841368 None:intergenic
AACCTCGAATTCCAGTCAAT+AGG 0.541599 7_1:+3842533 None:intergenic
ACTGGAATTCGAGGTTTGGA+AGG 0.548857 7_1:-3842526 Msa1005820:CDS
ATCACCGACTCTTTGTTCCC+AGG 0.551407 7_1:+3841210 None:intergenic
GTTGTTGGTCATAAACCTCT+CGG 0.552677 7_1:-3842773 Msa1005820:CDS
CGTCCCTGAAGGCAATCCAC+TGG 0.554415 7_1:+3841104 None:intergenic
TTGCATGCTTCAGAAAATGT+CGG 0.555563 7_1:-3841747 Msa1005820:CDS
TGGAATGATGGGTCTAATGA+GGG 0.558146 7_1:-3843001 Msa1005820:CDS
ATAACTTGGTGAGTATGGGT+TGG 0.559562 7_1:+3843230 None:intergenic
CGCGAGAATGTATTCTTCGA+TGG 0.559797 7_1:-3841937 Msa1005820:CDS
ATGAAACGATTGAACTTAGA+GGG 0.560005 7_1:-3841611 Msa1005820:CDS
TGATGCATTGTTGGAATGAT+GGG 0.560209 7_1:-3843012 Msa1005820:CDS
AAAGGTTGTTGTAAAGAAGC+CGG 0.561512 7_1:-3841043 Msa1005820:CDS
AAGGGTAAAAGTGGGACCGC+AGG 0.562026 7_1:-3841243 Msa1005820:CDS
GAAATTGGTTGAAAGAGAAG+TGG 0.570222 7_1:-3842732 Msa1005820:CDS
GTTTCTTAAAGAACGGCCCT+CGG 0.572883 7_1:+3842082 None:intergenic
AACAAAGAGTCGGTGATGCA+TGG 0.575868 7_1:-3841204 Msa1005820:CDS
TCAACTTTCATCGTCCCTGA+AGG 0.578610 7_1:+3841093 None:intergenic
GGTGGTAATAGTAGTACTGT+TGG 0.578659 7_1:-3842980 Msa1005820:CDS
TTCCTTCTAGCCGAAGATGA+AGG 0.582847 7_1:+3841339 None:intergenic
ATGAAGAGTAATCTGAATGA+TGG 0.584563 7_1:-3841270 Msa1005820:CDS
CGAAGAATACATTCTCGCGT+TGG 0.584770 7_1:+3841941 None:intergenic
GATGCTGCTGTTGATGGTGG+TGG 0.584949 7_1:-3842572 Msa1005820:CDS
AACAAGCTTGAGAGCCTCCA+GGG 0.587449 7_1:-3840841 Msa1005820:CDS
GTTAGAACAAGAAGAGCCAG+TGG 0.587680 7_1:-3841120 Msa1005820:CDS
TTGGAATGATGGGTCTAATG+AGG 0.593162 7_1:-3843002 Msa1005820:CDS
AATGATGCTGCTGTTGATGG+TGG 0.595623 7_1:-3842575 Msa1005820:CDS
AGAAAATATGAATTTCCAAG+AGG 0.598753 7_1:-3841799 Msa1005820:CDS
TCTAGCAAAAGCTCTATCAA+GGG 0.599294 7_1:-3841151 Msa1005820:CDS
TGATTCAGGATTGGATTCTG+AGG 0.599780 7_1:-3840782 Msa1005820:CDS
TCCGCTGCAGGAAGGTTTAG+GGG 0.600140 7_1:-3841418 Msa1005820:CDS
ACCAGAACCATCAAAGAGTG+TGG 0.601044 7_1:-3840875 Msa1005820:CDS
TTCAGGATTGGATTCTGAGG+TGG 0.603058 7_1:-3840779 Msa1005820:CDS
TTCGAGACAACAGTGTGAGA+CGG 0.605971 7_1:-3842205 Msa1005820:CDS
GGGTAGCTCAGTTGAAGATG+TGG 0.607590 7_1:-3840821 Msa1005820:CDS
TACTTTGGTAATGTTGAATG+TGG 0.608205 7_1:-3842800 Msa1005820:CDS
GTGAAATTGAGAATTCATGT+GGG 0.608726 7_1:-3843051 Msa1005820:CDS
TTTGGTTGGATCCGCAAATG+GGG 0.609216 7_1:+3843364 None:intergenic
GAGTGAAGATAGGGAATTTG+GGG 0.611519 7_1:-3842630 Msa1005820:CDS
TGCAATCGAATCAAACGAAG+AGG 0.612298 7_1:+3842316 None:intergenic
AAGAGGAAGGGATGGAACAA+AGG 0.613436 7_1:-3842136 Msa1005820:CDS
CCCAGGTGGATCCTCGCCTG+CGG 0.615664 7_1:+3841227 None:intergenic
CGAAGAAATGAGACAACAGA+AGG 0.615667 7_1:-3842264 Msa1005820:CDS
AGAAATGAGACAACAGAAGG+AGG 0.616109 7_1:-3842261 Msa1005820:CDS
TAAAAGTGGGACCGCAGGCG+AGG 0.618491 7_1:-3841238 Msa1005820:CDS
ACCGACTCTTTGTTCCCAGG+TGG 0.618912 7_1:+3841213 None:intergenic
AGACTTCCAAGAGGAAGTTG+TGG 0.620957 7_1:-3841892 Msa1005820:CDS
AATATGAATCCGCTGCAGGA+AGG 0.621708 7_1:-3841426 Msa1005820:CDS
GAAAGAGAAGTGGATGGTGT+TGG 0.626607 7_1:-3842722 Msa1005820:CDS
GAATTCCAGTCAATAGGCGA+AGG 0.627295 7_1:+3842539 None:intergenic
TTCGGGGAAGAAGGTATCCG+AGG 0.630086 7_1:-3842099 Msa1005820:CDS
TGTGAAATTGAGAATTCATG+TGG 0.631268 7_1:-3843052 Msa1005820:CDS
GATATTGGCCTGAAATGCGA+AGG 0.633118 7_1:+3841567 None:intergenic
CTAGCAAAAGCTCTATCAAG+GGG 0.633511 7_1:-3841150 Msa1005820:CDS
TCGGGGAAGAAGGTATCCGA+GGG 0.635783 7_1:-3842098 Msa1005820:CDS
AGAAAATGTCGGTTTCCAAG+TGG 0.639123 7_1:-3841736 Msa1005820:CDS
AATGATGGGTCTAATGAGGG+TGG 0.648862 7_1:-3842998 Msa1005820:CDS
TCCACCTGGGAACAAAGAGT+CGG 0.658869 7_1:-3841214 Msa1005820:CDS
ATGGCTTCAAGGGTAAAAGT+GGG 0.660908 7_1:-3841251 Msa1005820:CDS
CCGCAGGCGAGGATCCACCT+GGG 0.665123 7_1:-3841227 Msa1005820:CDS
AAACGAAGAAGAATACATAC+CGG 0.666042 7_1:+3842373 None:intergenic
GGAAAATATGAATTTCCAGG+AGG 0.667610 7_1:-3841838 Msa1005820:CDS
GAGACAACAGTGTGAGACGG+AGG 0.678381 7_1:-3842202 Msa1005820:CDS
TTGGTTGAAAGAGAAGTGGA+TGG 0.691598 7_1:-3842728 Msa1005820:CDS
TGGTAATGTTGAATGTGGCG+AGG 0.695118 7_1:-3842795 Msa1005820:CDS
TGGAAATGATGGAACAAATG+TGG 0.696111 7_1:-3842879 Msa1005820:CDS
CTTCGAACCGGTAATCCGAG+AGG 0.707153 7_1:+3842758 None:intergenic
ACGTCGTTCTCTTCTCACGC+CGG 0.709362 7_1:-3842392 Msa1005820:CDS
AGACACTATAGACTTCCAAG+AGG 0.725110 7_1:-3841901 Msa1005820:CDS
CTTCAACTGAGCTACCCTGG+AGG 0.729906 7_1:+3840827 None:intergenic
GGATTCAAAGAAGAGATTCG+GGG 0.744273 7_1:-3842115 Msa1005820:CDS
TAGCAAAAGCTCTATCAAGG+GGG 0.752717 7_1:-3841149 Msa1005820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGTAAATATTTCAATGAAAA+TGG - chr7_1:3841353-3841372 Msa1005820:CDS 20.0%
!!! TTCTTTTGTTTCTTAAAGAA+CGG + chr7_1:3841982-3842001 None:intergenic 20.0%
!!! TTCTTTAAGAAACAAAAGAA+TGG - chr7_1:3841982-3842001 Msa1005820:CDS 20.0%
!!! TCTTTAAGAAACAAAAGAAT+GGG - chr7_1:3841983-3842002 Msa1005820:CDS 20.0%
!! AAATTCATATCTTCAGAAAA+AGG + chr7_1:3842376-3842395 None:intergenic 20.0%
!!! TTACCTTTTTTGATTGGTTT+TGG + chr7_1:3840711-3840730 None:intergenic 25.0%
!! ATCAGAATTCGACAATTTTT+CGG + chr7_1:3841123-3841142 None:intergenic 25.0%
!! TCGAATTCTGATGATAATTT+TGG - chr7_1:3841131-3841150 Msa1005820:CDS 25.0%
!!! GATAATTTTGGTTATTCAGT+TGG - chr7_1:3841143-3841162 Msa1005820:CDS 25.0%
! AAAGTTTATGGCAATGATAA+TGG - chr7_1:3841563-3841582 Msa1005820:CDS 25.0%
!! AGAAAATATGATTTTCGAAG+AGG - chr7_1:3841901-3841920 Msa1005820:CDS 25.0%
! AGAAAATATGAATTTCCAAG+AGG - chr7_1:3842255-3842274 Msa1005820:CDS 25.0%
! AATCAGATCTTCTATTCAAA+GGG - chr7_1:3843079-3843098 Msa1005820:CDS 25.0%
!!! CTTTTTTGATTGGTTTTGGT+TGG + chr7_1:3840707-3840726 None:intergenic 30.0%
CAACCAAAACCAATCAAAAA+AGG - chr7_1:3840705-3840724 Msa1005820:CDS 30.0%
!!! CAAGAGTTACCTTTTTTGAT+TGG + chr7_1:3840717-3840736 None:intergenic 30.0%
! TTTCCTGCTTCAACTATTTT+TGG - chr7_1:3840972-3840991 Msa1005820:CDS 30.0%
TGTGAAATTGAGAATTCATG+TGG - chr7_1:3841002-3841021 Msa1005820:CDS 30.0%
GTGAAATTGAGAATTCATGT+GGG - chr7_1:3841003-3841022 Msa1005820:CDS 30.0%
AGAATAAGATGATGCATTGT+TGG - chr7_1:3841033-3841052 Msa1005820:CDS 30.0%
CATTCAACATTACCAAAGTA+AGG + chr7_1:3841254-3841273 None:intergenic 30.0%
!! TACTTTGGTAATGTTGAATG+TGG - chr7_1:3841254-3841273 Msa1005820:CDS 30.0%
! AATTGTTTCTCCAAATTCGA+AGG + chr7_1:3841458-3841477 None:intergenic 30.0%
AAACGAAGAAGAATACATAC+CGG + chr7_1:3841684-3841703 None:intergenic 30.0%
TGCATCGGATAATATCAATA+CGG - chr7_1:3841757-3841776 Msa1005820:CDS 30.0%
! AAATTCTTCTTTTCCAAAGC+AGG + chr7_1:3841830-3841849 None:intergenic 30.0%
! AAAATCATATTTTCTCGAGC+AGG + chr7_1:3841896-3841915 None:intergenic 30.0%
! AATATGATTTTCGAAGAGGA+AGG - chr7_1:3841905-3841924 Msa1005820:CDS 30.0%
! ATATGATTTTCGAAGAGGAA+GGG - chr7_1:3841906-3841925 Msa1005820:CDS 30.0%
AAGGATTCAAAGAAGAGATT+CGG - chr7_1:3841937-3841956 Msa1005820:CDS 30.0%
AACAAAAGAATGGGTACTAA+AGG - chr7_1:3841992-3842011 Msa1005820:CDS 30.0%
ACAAAAGAATGGGTACTAAA+GGG - chr7_1:3841993-3842012 Msa1005820:CDS 30.0%
! TATTTTCCGAAGTATGCAAA+GGG + chr7_1:3842204-3842223 None:intergenic 30.0%
! ATATTTTCCGAAGTATGCAA+AGG + chr7_1:3842205-3842224 None:intergenic 30.0%
TTCGGAAAATATGAATTTCC+AGG - chr7_1:3842213-3842232 Msa1005820:CDS 30.0%
!!! ATTTTCTGAAGCATGCAAAT+AGG + chr7_1:3842305-3842324 None:intergenic 30.0%
AGATATGAATTTCCATGAGA+TGG - chr7_1:3842384-3842403 Msa1005820:CDS 30.0%
AATGAAACGATTGAACTTAG+AGG - chr7_1:3842442-3842461 Msa1005820:CDS 30.0%
ATGAAACGATTGAACTTAGA+GGG - chr7_1:3842443-3842462 Msa1005820:CDS 30.0%
TGAGTTTCATCAACAGATAT+TGG + chr7_1:3842505-3842524 None:intergenic 30.0%
AACTTGAATCACGTATTTCA+CGG - chr7_1:3842524-3842543 Msa1005820:CDS 30.0%
TTCTGATGAAACAGAATCTA+CGG + chr7_1:3842608-3842627 None:intergenic 30.0%
ATGAAGAGTAATCTGAATGA+TGG - chr7_1:3842784-3842803 Msa1005820:CDS 30.0%
! CTTTACAACAACCTTTTCAT+CGG + chr7_1:3843007-3843026 None:intergenic 30.0%
GAATCAGATCTTCTATTCAA+AGG - chr7_1:3843078-3843097 Msa1005820:CDS 30.0%
! CTATTTTCCAAATCATGATG+AGG - chr7_1:3843125-3843144 Msa1005820:CDS 30.0%
TCTGAATATGTCAATGATTC+AGG - chr7_1:3843258-3843277 Msa1005820:CDS 30.0%
ATATGTCAATGATTCAGGAT+TGG - chr7_1:3843263-3843282 Msa1005820:CDS 30.0%
CAAATTAGGCTTCAGAAAAT+TGG - chr7_1:3843336-3843355 Msa1005820:CDS 30.0%
TGGATCAATTGAAAGATCAA+AGG - chr7_1:3843356-3843375 Msa1005820:CDS 30.0%
GGATCAATTGAAAGATCAAA+GGG - chr7_1:3843357-3843376 Msa1005820:CDS 30.0%
TCAAAGGGTCAAAAAATCTT+TGG - chr7_1:3843372-3843391 Msa1005820:CDS 30.0%
AAAAATTCAGGAGCTTGTGA+AGG + chr7_1:3840801-3840820 None:intergenic 35.0%
!! ATGGGTTGGTTCAAAAATTC+AGG + chr7_1:3840813-3840832 None:intergenic 35.0%
! CTTCTTCACCTTCTTTTCAT+TGG - chr7_1:3840852-3840871 Msa1005820:CDS 35.0%
CAACAATGCCAATGAAAAGA+AGG + chr7_1:3840863-3840882 None:intergenic 35.0%
! ATTGGCATTGTTGTTGCTTA+TGG - chr7_1:3840870-3840889 Msa1005820:CDS 35.0%
TCACCAAAAATAGTTGAAGC+AGG + chr7_1:3840978-3840997 None:intergenic 35.0%
ATGATGCATTGTTGGAATGA+TGG - chr7_1:3841041-3841060 Msa1005820:CDS 35.0%
TGATGCATTGTTGGAATGAT+GGG - chr7_1:3841042-3841061 Msa1005820:CDS 35.0%
!!! GGTTATTCAGTTGGTTTTGA+TGG - chr7_1:3841152-3841171 Msa1005820:CDS 35.0%
!!! TATTCAGTTGGTTTTGATGG+TGG - chr7_1:3841155-3841174 Msa1005820:CDS 35.0%
! TGGAAATGATGGAACAAATG+TGG - chr7_1:3841175-3841194 Msa1005820:CDS 35.0%
GAACAAATGTGGTTCAATCT+TGG - chr7_1:3841186-3841205 Msa1005820:CDS 35.0%
ACCAATTTCAAACTTCGAAC+CGG + chr7_1:3841311-3841330 None:intergenic 35.0%
GAAATTGGTTGAAAGAGAAG+TGG - chr7_1:3841322-3841341 Msa1005820:CDS 35.0%
! AATGGAAGTGATTCGAGTTT+AGG - chr7_1:3841371-3841390 Msa1005820:CDS 35.0%
TGAGTGAAGATAGGGAATTT+GGG - chr7_1:3841423-3841442 Msa1005820:CDS 35.0%
TTTAATGATGCTGCTGTTGA+TGG - chr7_1:3841476-3841495 Msa1005820:CDS 35.0%
ATGGAAAGGGAGAAAGTTTA+TGG - chr7_1:3841551-3841570 Msa1005820:CDS 35.0%
ATAATGGTTCTTCGCAGTTT+AGG - chr7_1:3841579-3841598 Msa1005820:CDS 35.0%
! GTTGATGAGACTAAGTTTGA+AGG - chr7_1:3841611-3841630 Msa1005820:CDS 35.0%
! TTCGTTTGATTCGATTGCAT+CGG - chr7_1:3841697-3841716 Msa1005820:CDS 35.0%
GCATCGGATAATATCAATAC+GGG - chr7_1:3841758-3841777 Msa1005820:CDS 35.0%
AGGATTCAAAGAAGAGATTC+GGG - chr7_1:3841938-3841957 Msa1005820:CDS 35.0%
TGAGTTTCATCAACAGACAT+TGG + chr7_1:3842040-3842059 None:intergenic 35.0%
! ATTTTCCGAAGTATGCAAAG+GGG + chr7_1:3842203-3842222 None:intergenic 35.0%
GGAAAATATGAATTTCCAGG+AGG - chr7_1:3842216-3842235 Msa1005820:CDS 35.0%
GAATTTCCAAGAGGAAGATA+TGG - chr7_1:3842264-3842283 Msa1005820:CDS 35.0%
TTGCATGCTTCAGAAAATGT+CGG - chr7_1:3842307-3842326 Msa1005820:CDS 35.0%
! GAATTTCCATGAGATGGATT+TGG - chr7_1:3842390-3842409 Msa1005820:CDS 35.0%
! TTCAAGTTCACCTTCATCTT+CGG - chr7_1:3842705-3842724 Msa1005820:CDS 35.0%
AAATGGCTGCAATGAAGTTT+CGG + chr7_1:3842743-3842762 None:intergenic 35.0%
TAATCTGAATGATGGCTTCA+AGG - chr7_1:3842792-3842811 Msa1005820:CDS 35.0%
AATCTGAATGATGGCTTCAA+GGG - chr7_1:3842793-3842812 Msa1005820:CDS 35.0%
TCTAGCAAAAGCTCTATCAA+GGG - chr7_1:3842903-3842922 Msa1005820:CDS 35.0%
AAAGGTTGTTGTAAAGAAGC+CGG - chr7_1:3843011-3843030 Msa1005820:CDS 35.0%
GTTGCTGTATCAACATTATC+CGG + chr7_1:3843033-3843052 None:intergenic 35.0%
AACGAAACCTCATCATGATT+TGG + chr7_1:3843135-3843154 None:intergenic 35.0%
AAATCATGATGAGGTTTCGT+TGG - chr7_1:3843134-3843153 Msa1005820:CDS 35.0%
! TCTTTGGTGACAACAATGTT+AGG - chr7_1:3843388-3843407 Msa1005820:CDS 35.0%
!! TTTTGGTTGGATCCGCAAAT+GGG + chr7_1:3840694-3840713 None:intergenic 40.0%
! ATAACTTGGTGAGTATGGGT+TGG + chr7_1:3840827-3840846 None:intergenic 40.0%
AACCCATACTCACCAAGTTA+TGG - chr7_1:3840826-3840845 Msa1005820:CDS 40.0%
ACCCATACTCACCAAGTTAT+GGG - chr7_1:3840827-3840846 Msa1005820:CDS 40.0%
! TCCCATAACTTGGTGAGTAT+GGG + chr7_1:3840831-3840850 None:intergenic 40.0%
!! TTGGAATGATGGGTCTAATG+AGG - chr7_1:3841052-3841071 Msa1005820:CDS 40.0%
!! TGGAATGATGGGTCTAATGA+GGG - chr7_1:3841053-3841072 Msa1005820:CDS 40.0%
GGTGGTAATAGTAGTACTGT+TGG - chr7_1:3841074-3841093 Msa1005820:CDS 40.0%
!!! GGTTTTGATGGTGGAAATGA+TGG - chr7_1:3841164-3841183 Msa1005820:CDS 40.0%
GTTGTTGCTCAACCTTACTT+TGG - chr7_1:3841239-3841258 Msa1005820:CDS 40.0%
GTTGTTGGTCATAAACCTCT+CGG - chr7_1:3841281-3841300 Msa1005820:CDS 40.0%
TCATAAACCTCTCGGATTAC+CGG - chr7_1:3841289-3841308 Msa1005820:CDS 40.0%
!! ACCGGTTCGAAGTTTGAAAT+TGG - chr7_1:3841307-3841326 Msa1005820:CDS 40.0%
TTGGTTGAAAGAGAAGTGGA+TGG - chr7_1:3841326-3841345 Msa1005820:CDS 40.0%
GTTGGATGTGAGTGAAGATA+GGG - chr7_1:3841415-3841434 Msa1005820:CDS 40.0%
GTGAGTGAAGATAGGGAATT+TGG - chr7_1:3841422-3841441 Msa1005820:CDS 40.0%
GAGTGAAGATAGGGAATTTG+GGG - chr7_1:3841424-3841443 Msa1005820:CDS 40.0%
AGATAGGGAATTTGGGGAAA+TGG - chr7_1:3841430-3841449 Msa1005820:CDS 40.0%
GGAAATGGATCCTTCGAATT+TGG - chr7_1:3841445-3841464 Msa1005820:CDS 40.0%
AACCTCGAATTCCAGTCAAT+AGG + chr7_1:3841524-3841543 None:intergenic 40.0%
ATTGACTGGAATTCGAGGTT+TGG - chr7_1:3841524-3841543 Msa1005820:CDS 40.0%
TTAGTCTCATCAACCGAAAG+AGG + chr7_1:3841605-3841624 None:intergenic 40.0%
GAGACTAAGTTTGAAGGACT+TGG - chr7_1:3841617-3841636 Msa1005820:CDS 40.0%
TGCAATCGAATCAAACGAAG+AGG + chr7_1:3841696-3841715 None:intergenic 40.0%
CGAAGAAATGAGACAACAGA+AGG - chr7_1:3841790-3841809 Msa1005820:CDS 40.0%
AGAAATGAGACAACAGAAGG+AGG - chr7_1:3841793-3841812 Msa1005820:CDS 40.0%
GGATTCAAAGAAGAGATTCG+GGG - chr7_1:3841939-3841958 Msa1005820:CDS 40.0%
GGAAACATGCTGCACATTTA+AGG - chr7_1:3842014-3842033 Msa1005820:CDS 40.0%
AGACACTATAGACTTCCAAG+AGG - chr7_1:3842153-3842172 Msa1005820:CDS 40.0%
TTTGTTCCACAACTTCCTCT+TGG + chr7_1:3842171-3842190 None:intergenic 40.0%
AAGTATGCATATCTTCCTCC+TGG + chr7_1:3842234-3842253 None:intergenic 40.0%
!! AGAAAATGTCGGTTTCCAAG+TGG - chr7_1:3842318-3842337 Msa1005820:CDS 40.0%
GGTTTCCAAGTGGAAGATTT+GGG - chr7_1:3842328-3842347 Msa1005820:CDS 40.0%
TTTGTCCCAAATCTTCCACT+TGG + chr7_1:3842336-3842355 None:intergenic 40.0%
TTTGGCGACAAAGATTTCTC+AGG - chr7_1:3842408-3842427 Msa1005820:CDS 40.0%
AAGATTTCTCAGGTGTCTTC+AGG - chr7_1:3842418-3842437 Msa1005820:CDS 40.0%
TTTCTCATCCTTCGCATTTC+AGG - chr7_1:3842479-3842498 Msa1005820:CDS 40.0%
AGAAAATATGAATCCGCTGC+AGG - chr7_1:3842624-3842643 Msa1005820:CDS 40.0%
TGAAGAAGACGAAGAAGAAG+AGG + chr7_1:3842689-3842708 None:intergenic 40.0%
TCGTGTAGCAAGCTAACAAA+TGG + chr7_1:3842760-3842779 None:intergenic 40.0%
ATGGCTTCAAGGGTAAAAGT+GGG - chr7_1:3842803-3842822 Msa1005820:CDS 40.0%
! AGAGCTTTTGCTAGACTTGT+TGG + chr7_1:3842898-3842917 None:intergenic 40.0%
GTCTAGCAAAAGCTCTATCA+AGG - chr7_1:3842902-3842921 Msa1005820:CDS 40.0%
CTAGCAAAAGCTCTATCAAG+GGG - chr7_1:3842904-3842923 Msa1005820:CDS 40.0%
TAGCAAAAGCTCTATCAAGG+GGG - chr7_1:3842905-3842924 Msa1005820:CDS 40.0%
AAGTCTTCCACACTCTTTGA+TGG + chr7_1:3843189-3843208 None:intergenic 40.0%
! ATCAAAGAGTGTGGAAGACT+TGG - chr7_1:3843188-3843207 Msa1005820:CDS 40.0%
TGATTCAGGATTGGATTCTG+AGG - chr7_1:3843272-3843291 Msa1005820:CDS 40.0%
AAGCTAGTGAATTTATCGCC+AGG - chr7_1:3843304-3843323 Msa1005820:CDS 40.0%
!! CCTAATTTGAGCTTTGAACC+TGG + chr7_1:3843325-3843344 None:intergenic 40.0%
CCAGGTTCAAAGCTCAAATT+AGG - chr7_1:3843322-3843341 Msa1005820:CDS 40.0%
GCAAATGGGGTTTCGAGATT+GGG + chr7_1:3840680-3840699 None:intergenic 45.0%
CAATCTCGAAACCCCATTTG+CGG - chr7_1:3840679-3840698 Msa1005820:CDS 45.0%
TTTGGTTGGATCCGCAAATG+GGG + chr7_1:3840693-3840712 None:intergenic 45.0%
!!! GTTTTGGTTGGATCCGCAAA+TGG + chr7_1:3840695-3840714 None:intergenic 45.0%
GGAGCTTGTGAAGGAAAAAG+TGG + chr7_1:3840792-3840811 None:intergenic 45.0%
! CTCCCATAACTTGGTGAGTA+TGG + chr7_1:3840832-3840851 None:intergenic 45.0%
GTGAAGAAGCTCCCATAACT+TGG + chr7_1:3840841-3840860 None:intergenic 45.0%
!! AATGATGGGTCTAATGAGGG+TGG - chr7_1:3841056-3841075 Msa1005820:CDS 45.0%
! TGGTAATGTTGAATGTGGCG+AGG - chr7_1:3841259-3841278 Msa1005820:CDS 45.0%
GAAAGAGAAGTGGATGGTGT+TGG - chr7_1:3841332-3841351 Msa1005820:CDS 45.0%
! GTGATTCGAGTTTAGGTTCG+AGG - chr7_1:3841378-3841397 Msa1005820:CDS 45.0%
GGTTGGATGTGAGTGAAGAT+AGG - chr7_1:3841414-3841433 Msa1005820:CDS 45.0%
! AATGATGCTGCTGTTGATGG+TGG - chr7_1:3841479-3841498 Msa1005820:CDS 45.0%
GAATTCCAGTCAATAGGCGA+AGG + chr7_1:3841518-3841537 None:intergenic 45.0%
ACTGGAATTCGAGGTTTGGA+AGG - chr7_1:3841528-3841547 Msa1005820:CDS 45.0%
GAATTCGAGGTTTGGAAGGA+TGG - chr7_1:3841532-3841551 Msa1005820:CDS 45.0%
GAGGTTTGGAAGGATGGAAA+GGG - chr7_1:3841538-3841557 Msa1005820:CDS 45.0%
TTCGCAGTTTAGGCCTCTTT+CGG - chr7_1:3841589-3841608 Msa1005820:CDS 45.0%
! CTTTTCCAAAGCAGGCACAT+AGG + chr7_1:3841822-3841841 None:intergenic 45.0%
TTCGAGACAACAGTGTGAGA+CGG - chr7_1:3841849-3841868 Msa1005820:CDS 45.0%
! GATTTTCGAAGAGGAAGGGA+TGG - chr7_1:3841910-3841929 Msa1005820:CDS 45.0%
AAGAGGAAGGGATGGAACAA+AGG - chr7_1:3841918-3841937 Msa1005820:CDS 45.0%
AAGAAGAGATTCGGGGAAGA+AGG - chr7_1:3841946-3841965 Msa1005820:CDS 45.0%
GTTTCTTAAAGAACGGCCCT+CGG + chr7_1:3841975-3841994 None:intergenic 45.0%
CAGAAAAAGATCCTGTCGAC+TGG + chr7_1:3842093-3842112 None:intergenic 45.0%
CGAAGAATACATTCTCGCGT+TGG + chr7_1:3842116-3842135 None:intergenic 45.0%
CGCGAGAATGTATTCTTCGA+TGG - chr7_1:3842117-3842136 Msa1005820:CDS 45.0%
AGACTTCCAAGAGGAAGTTG+TGG - chr7_1:3842162-3842181 Msa1005820:CDS 45.0%
GACTTCCCCTTTGCATACTT+CGG - chr7_1:3842195-3842214 Msa1005820:CDS 45.0%
TGTGCTCCATATCTTCCTCT+TGG + chr7_1:3842273-3842292 None:intergenic 45.0%
CGGTTTCCAAGTGGAAGATT+TGG - chr7_1:3842327-3842346 Msa1005820:CDS 45.0%
TTGTCGCCAAATCCATCTCA+TGG + chr7_1:3842399-3842418 None:intergenic 45.0%
! GATATTGGCCTGAAATGCGA+AGG + chr7_1:3842490-3842509 None:intergenic 45.0%
AATATGAATCCGCTGCAGGA+AGG - chr7_1:3842628-3842647 Msa1005820:CDS 45.0%
TTCCTTCTAGCCGAAGATGA+AGG + chr7_1:3842718-3842737 None:intergenic 45.0%
GATGGCTTCAAGGGTAAAAG+TGG - chr7_1:3842802-3842821 Msa1005820:CDS 45.0%
AACAAAGAGTCGGTGATGCA+TGG - chr7_1:3842850-3842869 Msa1005820:CDS 45.0%
! GGTGATGCATGGTTTGCATT+CGG - chr7_1:3842861-3842880 Msa1005820:CDS 45.0%
GTTAGAACAAGAAGAGCCAG+TGG - chr7_1:3842934-3842953 Msa1005820:CDS 45.0%
TCAACTTTCATCGTCCCTGA+AGG + chr7_1:3842964-3842983 None:intergenic 45.0%
TAGCAAGCAAGCCGATGAAA+AGG - chr7_1:3842993-3843012 Msa1005820:CDS 45.0%
ACCAGAACCATCAAAGAGTG+TGG - chr7_1:3843179-3843198 Msa1005820:CDS 45.0%
! TCCACACTCTTTGATGGTTC+TGG + chr7_1:3843183-3843202 None:intergenic 45.0%
! TTCAGGATTGGATTCTGAGG+TGG - chr7_1:3843275-3843294 Msa1005820:CDS 45.0%
TGGGGTTTCGAGATTGGGAT+TGG + chr7_1:3840675-3840694 None:intergenic 50.0%
CGCAAATGGGGTTTCGAGAT+TGG + chr7_1:3840681-3840700 None:intergenic 50.0%
GTTGAATGTGGCGAGGTTGT+TGG - chr7_1:3841266-3841285 Msa1005820:CDS 50.0%
! GTTCGAGGCGTTCTTCTAAG+AGG - chr7_1:3841393-3841412 Msa1005820:CDS 50.0%
! GAGGCGTTCTTCTAAGAGGT+TGG - chr7_1:3841397-3841416 Msa1005820:CDS 50.0%
CTTCTCCTTCGCCTATTGAC+TGG - chr7_1:3841510-3841529 Msa1005820:CDS 50.0%
! CGCCTATTGACTGGAATTCG+AGG - chr7_1:3841519-3841538 Msa1005820:CDS 50.0%
CGAGGTTTGGAAGGATGGAA+AGG - chr7_1:3841537-3841556 Msa1005820:CDS 50.0%
GGATTCCTATGTGCCTGCTT+TGG - chr7_1:3841814-3841833 Msa1005820:CDS 50.0%
TCACAGTCTTTCCAGTCGAC+AGG - chr7_1:3842079-3842098 Msa1005820:CDS 50.0%
TTCACGGTCTTTGCAGTCTG+TGG - chr7_1:3842540-3842559 Msa1005820:CDS 50.0%
TCACGGTCTTTGCAGTCTGT+GGG - chr7_1:3842541-3842560 Msa1005820:CDS 50.0%
AATCCGCTGCAGGAAGGTTT+AGG - chr7_1:3842634-3842653 Msa1005820:CDS 50.0%
ATCCGCTGCAGGAAGGTTTA+GGG - chr7_1:3842635-3842654 Msa1005820:CDS 50.0%
GGGGAAAAGAAGAGCTTGCA+TGG - chr7_1:3842655-3842674 Msa1005820:CDS 50.0%
CACCTTCATCTTCGGCTAGA+AGG - chr7_1:3842713-3842732 Msa1005820:CDS 50.0%
TCCACCTGGGAACAAAGAGT+CGG - chr7_1:3842840-3842859 Msa1005820:CDS 50.0%
!! ATCACCGACTCTTTGTTCCC+AGG + chr7_1:3842847-3842866 None:intergenic 50.0%
GTTTGCATTCGGACTCAGAC+AGG - chr7_1:3842872-3842891 Msa1005820:CDS 50.0%
TAACAAGCTTGAGAGCCTCC+AGG - chr7_1:3843212-3843231 Msa1005820:CDS 50.0%
AACAAGCTTGAGAGCCTCCA+GGG - chr7_1:3843213-3843232 Msa1005820:CDS 50.0%
CATCTTCAACTGAGCTACCC+TGG + chr7_1:3843233-3843252 None:intergenic 50.0%
GGGTAGCTCAGTTGAAGATG+TGG - chr7_1:3843233-3843252 Msa1005820:CDS 50.0%
CTTCGAACCGGTAATCCGAG+AGG + chr7_1:3841299-3841318 None:intergenic 55.0%
!! GATGCTGCTGTTGATGGTGG+TGG - chr7_1:3841482-3841501 Msa1005820:CDS 55.0%
ACGTCGTTCTCTTCTCACGC+CGG - chr7_1:3841662-3841681 Msa1005820:CDS 55.0%
GAGACAACAGTGTGAGACGG+AGG - chr7_1:3841852-3841871 Msa1005820:CDS 55.0%
!! TTCGGGGAAGAAGGTATCCG+AGG - chr7_1:3841955-3841974 Msa1005820:CDS 55.0%
!! TCGGGGAAGAAGGTATCCGA+GGG - chr7_1:3841956-3841975 Msa1005820:CDS 55.0%
TCCGCTGCAGGAAGGTTTAG+GGG - chr7_1:3842636-3842655 Msa1005820:CDS 55.0%
TCCCCTAAACCTTCCTGCAG+CGG + chr7_1:3842640-3842659 None:intergenic 55.0%
AAGGGTAAAAGTGGGACCGC+AGG - chr7_1:3842811-3842830 Msa1005820:CDS 55.0%
! ACCGACTCTTTGTTCCCAGG+TGG + chr7_1:3842844-3842863 None:intergenic 55.0%
!! AGAGCCAGTGGATTGCCTTC+AGG - chr7_1:3842946-3842965 Msa1005820:CDS 55.0%
!! GAGCCAGTGGATTGCCTTCA+GGG - chr7_1:3842947-3842966 Msa1005820:CDS 55.0%
CTTCAACTGAGCTACCCTGG+AGG + chr7_1:3843230-3843249 None:intergenic 55.0%
TAAAAGTGGGACCGCAGGCG+AGG - chr7_1:3842816-3842835 Msa1005820:CDS 60.0%
CGTCCCTGAAGGCAATCCAC+TGG + chr7_1:3842953-3842972 None:intergenic 60.0%
ACCGCAGGCGAGGATCCACC+TGG - chr7_1:3842826-3842845 Msa1005820:CDS 70.0%
CCCAGGTGGATCCTCGCCTG+CGG + chr7_1:3842830-3842849 None:intergenic 70.0%
CCGCAGGCGAGGATCCACCT+GGG - chr7_1:3842827-3842846 Msa1005820:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 3840663 3843413 3840663 ID=Msa1005820;Name=Msa1005820
chr7_1 mRNA 3840663 3843413 3840663 ID=Msa1005820-mRNA-1;Parent=Msa1005820;Name=Msa1005820-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|916
chr7_1 exon 3840663 3843413 3840663 ID=Msa1005820-mRNA-1:exon:1466;Parent=Msa1005820-mRNA-1
chr7_1 CDS 3840663 3843413 3840663 ID=Msa1005820-mRNA-1:cds;Parent=Msa1005820-mRNA-1
Gene Sequence

>Msa1005820

ATGGCGGATCCAATCCCAATCTCGAAACCCCATTTGCGGATCCAACCAAAACCAATCAAAAAAGGTAACTCTTGTTCAGATTTCATCATAAAGTTTCTATTTTTAGCAGTTTTCATCATTGTTCTTCCACTTTTTCCTTCACAAGCTCCTGAATTTTTGAACCAACCCATACTCACCAAGTTATGGGAGCTTCTTCACCTTCTTTTCATTGGCATTGTTGTTGCTTATGGTCTTTTTAGTAGAAGAAATGCTGAATTAGAAACTAATGATAGTGATAATAATAATAGTGCTAATTATGTTTCTAAGTTTTTTCCTGCTTCAACTATTTTTGGTGATGAATGTGAAATTGAGAATTCATGTGGGTTTGATGAGAATAAGATGATGCATTGTTGGAATGATGGGTCTAATGAGGGTGGTAATAGTAGTACTGTTGGTGTTTTTGATGAACAGTACAATACCGAAAAATTGTCGAATTCTGATGATAATTTTGGTTATTCAGTTGGTTTTGATGGTGGAAATGATGGAACAAATGTGGTTCAATCTTGGAATTCTGAGTATTTTTATAGTGAGTCTGTTGTTGTTGCTCAACCTTACTTTGGTAATGTTGAATGTGGCGAGGTTGTTGGTCATAAACCTCTCGGATTACCGGTTCGAAGTTTGAAATTGGTTGAAAGAGAAGTGGATGGTGTTGGTAAATATTTCAATGAAAATGGAAGTGATTCGAGTTTAGGTTCGAGGCGTTCTTCTAAGAGGTTGGATGTGAGTGAAGATAGGGAATTTGGGGAAATGGATCCTTCGAATTTGGAGAAACAATTTAATGATGCTGCTGTTGATGGTGGTGGAATTGCTTCTCCTTCGCCTATTGACTGGAATTCGAGGTTTGGAAGGATGGAAAGGGAGAAAGTTTATGGCAATGATAATGGTTCTTCGCAGTTTAGGCCTCTTTCGGTTGATGAGACTAAGTTTGAAGGACTTGGCTCGTACTCTTCACAGTCTACAACGTCGTTCTCTTCTCACGCCGGTATGTATTCTTCTTCGTTTGATTCGATTGCATCTGATAATATCAATATGTATTCCTCTTCGTTTGATTCGATTGCATCGGATAATATCAATACGGGTTTTCAAGACGAAGAAATGAGACAACAGAAGGAGGATTCCTATGTGCCTGCTTTGGAAAAGAAGAATTTTCGAGACAACAGTGTGAGACGGAGGAAGACTTCTTCGTTTGTGCCTGCTCGAGAAAATATGATTTTCGAAGAGGAAGGGATGGAACAAAGGATTCAAAGAAGAGATTCGGGGAAGAAGGTATCCGAGGGCCGTTCTTTAAGAAACAAAAGAATGGGTACTAAAGGGAAACATGCTGCACATTTAAGGCCAATGTCTGTTGATGAAACTCAATTTGTCGAATCGCTTAGTTCACAGTCTTTCCAGTCGACAGGATCTTTTTCTGCCAACGCGAGAATGTATTCTTCGATGGACTCGATTTCTTCAGACACTATAGACTTCCAAGAGGAAGTTGTGGAACAAAAAGAGACTTCCCCTTTGCATACTTCGGAAAATATGAATTTCCAGGAGGAAGATATGCATACTTCAGAAAATATGAATTTCCAAGAGGAAGATATGGAGCACAATAACACTTCCTATTTGCATGCTTCAGAAAATGTCGGTTTCCAAGTGGAAGATTTGGGACAAAAGAAGACTTCATTTGTGCCTTTTTCTGAAGATATGAATTTCCATGAGATGGATTTGGCGACAAAGATTTCTCAGGTGTCTTCAGGAAATGAAACGATTGAACTTAGAGGGAAATATGCTGCTGTTTCTCATCCTTCGCATTTCAGGCCAATATCTGTTGATGAAACTCAACTTGAATCACGTATTTCACGGTCTTTGCAGTCTGTGGGATCTTTCTCATCTCACACGAGTAACACGAGTTTGCGTTCTTCCGTAGATTCTGTTTCATCAGAAAATATGAATCCGCTGCAGGAAGGTTTAGGGGAAAAGAAGAGCTTGCATGGATCTTCTTCCTCTTCTTCTTCGTCTTCTTCAAGTTCACCTTCATCTTCGGCTAGAAGGAACGCCGAAACTTCATTGCAGCCATTTGTTAGCTTGCTACACGATGACATGAAGAGTAATCTGAATGATGGCTTCAAGGGTAAAAGTGGGACCGCAGGCGAGGATCCACCTGGGAACAAAGAGTCGGTGATGCATGGTTTGCATTCGGACTCAGACAGGCCAACAAGTCTAGCAAAAGCTCTATCAAGGGGGAAATCAGTTAGAACAAGAAGAGCCAGTGGATTGCCTTCAGGGACGATGAAAGTTGATGAAACGTCTAGCAAGCAAGCCGATGAAAAGGTTGTTGTAAAGAAGCCGGATAATGTTGATACAGCAACGAGAAAAGATAAAATGAAAAGTAGAGAATCAGATCTTCTATTCAAAGGGATCAGTAAGAAAACTCTTGATTGCTATTTTCCAAATCATGATGAGGTTTCGTTGGCGAGTCATCGTAAGAGAGATAAACCAGAACCATCAAAGAGTGTGGAAGACTTGGATAACAAGCTTGAGAGCCTCCAGGGTAGCTCAGTTGAAGATGTGGTGTCTGAATATGTCAATGATTCAGGATTGGATTCTGAGGTGGATAAGAAAGCTAGTGAATTTATCGCCAGGTTCAAAGCTCAAATTAGGCTTCAGAAAATTGGATCAATTGAAAGATCAAAGGGTCAAAAAATCTTTGGTGACAACAATGTTAGGTGA

Protein sequence

>Msa1005820

MADPIPISKPHLRIQPKPIKKGNSCSDFIIKFLFLAVFIIVLPLFPSQAPEFLNQPILTKLWELLHLLFIGIVVAYGLFSRRNAELETNDSDNNNSANYVSKFFPASTIFGDECEIENSCGFDENKMMHCWNDGSNEGGNSSTVGVFDEQYNTEKLSNSDDNFGYSVGFDGGNDGTNVVQSWNSEYFYSESVVVAQPYFGNVECGEVVGHKPLGLPVRSLKLVEREVDGVGKYFNENGSDSSLGSRRSSKRLDVSEDREFGEMDPSNLEKQFNDAAVDGGGIASPSPIDWNSRFGRMEREKVYGNDNGSSQFRPLSVDETKFEGLGSYSSQSTTSFSSHAGMYSSSFDSIASDNINMYSSSFDSIASDNINTGFQDEEMRQQKEDSYVPALEKKNFRDNSVRRRKTSSFVPARENMIFEEEGMEQRIQRRDSGKKVSEGRSLRNKRMGTKGKHAAHLRPMSVDETQFVESLSSQSFQSTGSFSANARMYSSMDSISSDTIDFQEEVVEQKETSPLHTSENMNFQEEDMHTSENMNFQEEDMEHNNTSYLHASENVGFQVEDLGQKKTSFVPFSEDMNFHEMDLATKISQVSSGNETIELRGKYAAVSHPSHFRPISVDETQLESRISRSLQSVGSFSSHTSNTSLRSSVDSVSSENMNPLQEGLGEKKSLHGSSSSSSSSSSSSPSSSARRNAETSLQPFVSLLHDDMKSNLNDGFKGKSGTAGEDPPGNKESVMHGLHSDSDRPTSLAKALSRGKSVRTRRASGLPSGTMKVDETSSKQADEKVVVKKPDNVDTATRKDKMKSRESDLLFKGISKKTLDCYFPNHDEVSLASHRKRDKPEPSKSVEDLDNKLESLQGSSVEDVVSEYVNDSGLDSEVDKKASEFIARFKAQIRLQKIGSIERSKGQKIFGDNNVR*