Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735130 | RHN56708.1 | 94.249 | 313 | 18 | 0 | 1 | 313 | 42 | 354 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735130 | sp|P22195|PER1_ARAHY | 58.333 | 300 | 119 | 4 | 13 | 311 | 22 | 316 | 9.31e-122 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735130 | A0A396HW23 | 94.249 | 313 | 18 | 0 | 1 | 313 | 42 | 354 | 0.0 | 619 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024280 | Msa0735130 | 0.834189 | 3.461676e-56 | -8.615850e-47 |
| Msa0059880 | Msa0735130 | 0.838860 | 2.237957e-57 | -8.615850e-47 |
| Msa0072030 | Msa0735130 | 0.808088 | 3.677597e-50 | -8.615850e-47 |
| Msa0120050 | Msa0735130 | 0.808281 | 3.345176e-50 | -8.615850e-47 |
| Msa0605470 | Msa0735130 | 0.820557 | 6.441722e-53 | -8.615850e-47 |
| Msa0631700 | Msa0735130 | 0.803508 | 3.371690e-49 | -8.615850e-47 |
| Msa0639410 | Msa0735130 | 0.804195 | 2.427566e-49 | -8.615850e-47 |
| Msa0640290 | Msa0735130 | 0.807619 | 4.627572e-50 | -8.615850e-47 |
| Msa0643840 | Msa0735130 | 0.806313 | 8.742156e-50 | -8.615850e-47 |
| Msa0645150 | Msa0735130 | 0.829997 | 3.763684e-55 | -8.615850e-47 |
| Msa0670360 | Msa0735130 | 0.810057 | 1.393025e-50 | -8.615850e-47 |
| Msa0671490 | Msa0735130 | 0.822810 | 1.940446e-53 | -8.615850e-47 |
| Msa0671640 | Msa0735130 | 0.814054 | 1.872716e-51 | -8.615850e-47 |
| Msa0678620 | Msa0735130 | 0.824533 | 7.664568e-54 | -8.615850e-47 |
| Msa0684620 | Msa0735130 | 0.854415 | 1.249908e-61 | -8.615850e-47 |
| Msa0711240 | Msa0735130 | 0.814914 | 1.208750e-51 | -8.615850e-47 |
| Msa0727480 | Msa0735130 | 0.816386 | 5.680023e-52 | -8.615850e-47 |
| Msa0735130 | Msa0735140 | 0.824483 | 7.875777e-54 | -8.615850e-47 |
| Msa0735130 | Msa0741360 | 0.808917 | 2.446675e-50 | -8.615850e-47 |
| Msa0735130 | Msa0743380 | 0.806267 | 8.937038e-50 | -8.615850e-47 |
| Msa0735130 | Msa0768670 | 0.825293 | 5.073880e-54 | -8.615850e-47 |
| Msa0735130 | Msa0768720 | 0.803816 | 2.909688e-49 | -8.615850e-47 |
| Msa0735130 | Msa0777060 | 0.845435 | 4.068109e-59 | -8.615850e-47 |
| Msa0735130 | Msa0777070 | 0.832028 | 1.193835e-55 | -8.615850e-47 |
| Msa0735130 | Msa0814160 | 0.842675 | 2.237550e-58 | -8.615850e-47 |
| Msa0735130 | Msa0824860 | 0.808085 | 3.683208e-50 | -8.615850e-47 |
| Msa0735130 | Msa0854840 | 0.845105 | 4.995848e-59 | -8.615850e-47 |
| Msa0735130 | Msa0855270 | 0.833887 | 4.119023e-56 | -8.615850e-47 |
| Msa0735130 | Msa0883640 | 0.826809 | 2.212538e-54 | -8.615850e-47 |
| Msa0735130 | Msa0896920 | 0.833428 | 5.364789e-56 | -8.615850e-47 |
| Msa0735130 | Msa0910830 | 0.828358 | 9.400453e-55 | -8.615850e-47 |
| Msa0735130 | Msa0933590 | 0.805274 | 1.444509e-49 | -8.615850e-47 |
| Msa0735130 | Msa0941120 | 0.835562 | 1.560763e-56 | -8.615850e-47 |
| Msa0735130 | Msa0960090 | 0.829194 | 5.898516e-55 | -8.615850e-47 |
| Msa0735130 | Msa0967820 | 0.802147 | 6.439078e-49 | -8.615850e-47 |
| Msa0735130 | Msa0985700 | 0.829272 | 5.646740e-55 | -8.615850e-47 |
| Msa0735130 | Msa1006170 | 0.820381 | 7.068338e-53 | -8.615850e-47 |
| Msa0735130 | Msa1021620 | 0.815569 | 8.643916e-52 | -8.615850e-47 |
| Msa0735130 | Msa1022510 | 0.802453 | 5.569976e-49 | -8.615850e-47 |
| Msa0735130 | Msa1024350 | 0.873417 | 1.494504e-67 | -8.615850e-47 |
| Msa0735130 | Msa1026050 | 0.848028 | 7.956319e-60 | -8.615850e-47 |
| Msa0735130 | Msa1061670 | 0.851008 | 1.173870e-60 | -8.615850e-47 |
| Msa0735130 | Msa1064940 | 0.821182 | 4.625457e-53 | -8.615850e-47 |
| Msa0735130 | Msa1087380 | 0.808655 | 2.783420e-50 | -8.615850e-47 |
| Msa0735130 | Msa1104960 | 0.819262 | 1.273793e-52 | -8.615850e-47 |
| Msa0735130 | Msa1106680 | 0.813163 | 2.941156e-51 | -8.615850e-47 |
| Msa0735130 | Msa1106960 | 0.834414 | 3.039247e-56 | -8.615850e-47 |
| Msa0735130 | Msa1109880 | 0.821394 | 4.132395e-53 | -8.615850e-47 |
| Msa0735130 | Msa1109890 | 0.849891 | 2.416375e-60 | -8.615850e-47 |
| Msa0735130 | Msa1147030 | 0.838718 | 2.434608e-57 | -8.615850e-47 |
| Msa0735130 | Msa1149020 | 0.805454 | 1.324507e-49 | -8.615850e-47 |
| Msa0735130 | Msa1152180 | 0.832604 | 8.599596e-56 | -8.615850e-47 |
| Msa0735130 | Msa1214960 | 0.800510 | 1.393336e-48 | -8.615850e-47 |
| Msa0735130 | Msa1256300 | 0.801934 | 7.123852e-49 | -8.615850e-47 |
| Msa0735130 | Msa1278640 | 0.801510 | 8.701850e-49 | -8.615850e-47 |
| Msa0735130 | Msa1286420 | 0.813610 | 2.346563e-51 | -8.615850e-47 |
| Msa0735130 | Msa1300610 | 0.804498 | 2.098836e-49 | -8.615850e-47 |
| Msa0735130 | Msa1323120 | 0.822338 | 2.499241e-53 | -8.615850e-47 |
| Msa0735130 | Msa1355330 | 0.814264 | 1.683302e-51 | -8.615850e-47 |
| Msa0735130 | Msa1355340 | 0.800829 | 1.199281e-48 | -8.615850e-47 |
| Msa0735130 | Msa1377520 | 0.821950 | 3.074560e-53 | -8.615850e-47 |
| Msa0735130 | Msa1411550 | 0.809130 | 2.203196e-50 | -8.615850e-47 |
| Msa0735130 | Msa1431330 | 0.811231 | 7.763845e-51 | -8.615850e-47 |
| Msa0735130 | Msa1456600 | 0.832143 | 1.118669e-55 | -8.615850e-47 |
| Msa0735130 | Msa1459610 | 0.849649 | 2.824606e-60 | -8.615850e-47 |
| Msa0121910 | Msa0735130 | 0.805971 | 1.031527e-49 | -8.615850e-47 |
| Msa0129850 | Msa0735130 | 0.806052 | 9.919673e-50 | -8.615850e-47 |
| Msa0130350 | Msa0735130 | 0.823231 | 1.548283e-53 | -8.615850e-47 |
| Msa0147670 | Msa0735130 | 0.804068 | 2.579329e-49 | -8.615850e-47 |
| Msa0150910 | Msa0735130 | 0.825008 | 5.924439e-54 | -8.615850e-47 |
| Msa0163340 | Msa0735130 | 0.841116 | 5.775374e-58 | -8.615850e-47 |
| Msa0177550 | Msa0735130 | 0.800279 | 1.552603e-48 | -8.615850e-47 |
| Msa0212550 | Msa0735130 | 0.813149 | 2.961733e-51 | -8.615850e-47 |
| Msa0366510 | Msa0735130 | 0.806395 | 8.401014e-50 | -8.615850e-47 |
| Msa0397190 | Msa0735130 | 0.806184 | 9.304231e-50 | -8.615850e-47 |
| Msa0409490 | Msa0735130 | 0.838060 | 3.599238e-57 | -8.615850e-47 |
| Msa0414480 | Msa0735130 | 0.820283 | 7.443785e-53 | -8.615850e-47 |
| Msa0418150 | Msa0735130 | 0.815745 | 7.896535e-52 | -8.615850e-47 |
| Msa0420890 | Msa0735130 | 0.800628 | 1.318140e-48 | -8.615850e-47 |
| Msa0464300 | Msa0735130 | 0.809223 | 2.103740e-50 | -8.615850e-47 |
| Msa0252930 | Msa0735130 | 0.833994 | 3.873342e-56 | -8.615850e-47 |
| Msa0278950 | Msa0735130 | 0.800320 | 1.523175e-48 | -8.615850e-47 |
| Msa0343720 | Msa0735130 | 0.840717 | 7.350701e-58 | -8.615850e-47 |
| Msa0491770 | Msa0735130 | 0.803713 | 3.056370e-49 | -8.615850e-47 |
| Msa0535570 | Msa0735130 | 0.808998 | 2.350599e-50 | -8.615850e-47 |
| Msa0538440 | Msa0735130 | 0.806052 | 9.917808e-50 | -8.615850e-47 |
| Msa0538450 | Msa0735130 | 0.801484 | 8.811070e-49 | -8.615850e-47 |
| Msa0538530 | Msa0735130 | 0.803987 | 2.681719e-49 | -8.615850e-47 |
| Msa0548820 | Msa0735130 | 0.801476 | 8.842618e-49 | -8.615850e-47 |
| Msa0554660 | Msa0735130 | 0.819645 | 1.041554e-52 | -8.615850e-47 |
| Msa0579530 | Msa0735130 | 0.842931 | 1.912533e-58 | -8.615850e-47 |
| Msa0589740 | Msa0735130 | 0.806725 | 7.154439e-50 | -8.615850e-47 |
| Msa0591490 | Msa0735130 | 0.813050 | 3.113480e-51 | -8.615850e-47 |
| Msa0594320 | Msa0735130 | 0.804915 | 1.717524e-49 | -8.615850e-47 |
| Msa0599600 | Msa0735130 | 0.809029 | 2.315628e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735130 | MtrunA17_Chr5g0432331 | 94.249 | 313 | 18 | 0 | 1 | 313 | 42 | 354 | 0.0 | 619 |
| Msa0735130 | MtrunA17_Chr5g0432351 | 88.462 | 312 | 36 | 0 | 1 | 312 | 11 | 322 | 0.0 | 585 |
| Msa0735130 | MtrunA17_Chr5g0432341 | 88.179 | 313 | 37 | 0 | 1 | 313 | 11 | 323 | 0.0 | 583 |
| Msa0735130 | MtrunA17_Chr3g0107881 | 65.385 | 312 | 105 | 2 | 1 | 311 | 15 | 324 | 2.73e-145 | 412 |
| Msa0735130 | MtrunA17_Chr5g0432401 | 62.258 | 310 | 78 | 1 | 1 | 310 | 15 | 285 | 1.99e-137 | 390 |
| Msa0735130 | MtrunA17_Chr4g0013171 | 61.218 | 312 | 115 | 4 | 2 | 311 | 14 | 321 | 1.74e-132 | 379 |
| Msa0735130 | MtrunA17_Chr4g0013181 | 63.851 | 296 | 101 | 4 | 18 | 311 | 62 | 353 | 2.34e-128 | 370 |
| Msa0735130 | MtrunA17_Chr5g0432441 | 56.774 | 310 | 124 | 7 | 7 | 311 | 22 | 326 | 1.60e-118 | 344 |
| Msa0735130 | MtrunA17_Chr3g0129051 | 54.459 | 314 | 135 | 5 | 1 | 311 | 14 | 322 | 6.03e-114 | 332 |
| Msa0735130 | MtrunA17_Chr5g0438021 | 54.403 | 318 | 133 | 6 | 1 | 311 | 13 | 325 | 2.12e-113 | 331 |
| Msa0735130 | MtrunA17_Chr3g0106921 | 53.968 | 315 | 136 | 7 | 1 | 311 | 11 | 320 | 1.89e-112 | 328 |
| Msa0735130 | MtrunA17_Chr3g0114451 | 55.853 | 299 | 126 | 4 | 14 | 311 | 25 | 318 | 2.42e-111 | 325 |
| Msa0735130 | MtrunA17_Chr2g0320071 | 53.722 | 309 | 137 | 5 | 4 | 311 | 14 | 317 | 1.30e-110 | 323 |
| Msa0735130 | MtrunA17_Chr2g0320061 | 53.722 | 309 | 138 | 4 | 4 | 311 | 14 | 318 | 1.42e-109 | 321 |
| Msa0735130 | MtrunA17_Chr4g0013201 | 52.288 | 306 | 140 | 5 | 7 | 311 | 38 | 338 | 9.94e-109 | 319 |
| Msa0735130 | MtrunA17_Chr2g0320051 | 54.305 | 302 | 133 | 4 | 11 | 311 | 21 | 318 | 1.37e-108 | 318 |
| Msa0735130 | MtrunA17_Chr2g0320031 | 53.226 | 310 | 139 | 5 | 4 | 311 | 14 | 319 | 4.80e-108 | 317 |
| Msa0735130 | MtrunA17_Chr1g0213061 | 52.632 | 304 | 136 | 5 | 11 | 311 | 23 | 321 | 7.53e-108 | 317 |
| Msa0735130 | MtrunA17_Chr2g0320101 | 53.074 | 309 | 139 | 5 | 4 | 311 | 14 | 317 | 1.24e-107 | 316 |
| Msa0735130 | MtrunA17_Chr3g0129061 | 53.822 | 314 | 137 | 5 | 1 | 311 | 14 | 322 | 8.89e-106 | 311 |
| Msa0735130 | MtrunA17_Chr2g0320091 | 52.581 | 310 | 140 | 6 | 4 | 311 | 14 | 318 | 1.40e-105 | 311 |
| Msa0735130 | MtrunA17_Chr7g0244461 | 50.962 | 312 | 144 | 5 | 1 | 311 | 9 | 312 | 2.72e-105 | 310 |
| Msa0735130 | MtrunA17_Chr3g0129041 | 54.459 | 314 | 135 | 5 | 1 | 311 | 14 | 322 | 6.53e-105 | 309 |
| Msa0735130 | MtrunA17_Chr3g0106901 | 53.376 | 311 | 139 | 4 | 2 | 311 | 18 | 323 | 1.88e-104 | 308 |
| Msa0735130 | MtrunA17_Chr7g0244451 | 53.333 | 300 | 134 | 4 | 13 | 311 | 22 | 316 | 2.75e-104 | 307 |
| Msa0735130 | MtrunA17_Chr4g0043391 | 50.316 | 316 | 148 | 6 | 1 | 311 | 13 | 324 | 2.63e-103 | 305 |
| Msa0735130 | MtrunA17_Chr5g0404721 | 52.787 | 305 | 132 | 5 | 15 | 311 | 30 | 330 | 2.93e-103 | 305 |
| Msa0735130 | MtrunA17_Chr4g0038171 | 50.000 | 316 | 149 | 6 | 1 | 311 | 10 | 321 | 6.90e-102 | 301 |
| Msa0735130 | MtrunA17_Chr4g0013191 | 50.165 | 303 | 142 | 6 | 13 | 311 | 43 | 340 | 1.24e-101 | 301 |
| Msa0735130 | MtrunA17_Chr8g0372601 | 51.475 | 305 | 136 | 5 | 15 | 311 | 30 | 330 | 2.04e-100 | 298 |
| Msa0735130 | MtrunA17_Chr7g0224371 | 47.910 | 311 | 156 | 5 | 2 | 311 | 17 | 322 | 2.13e-100 | 298 |
| Msa0735130 | MtrunA17_Chr4g0038161 | 48.254 | 315 | 151 | 7 | 4 | 311 | 11 | 320 | 8.96e-96 | 286 |
| Msa0735130 | MtrunA17_Chr4g0038151 | 48.684 | 304 | 146 | 6 | 13 | 311 | 23 | 321 | 2.38e-95 | 285 |
| Msa0735130 | MtrunA17_Chr2g0292091 | 46.984 | 315 | 156 | 5 | 5 | 311 | 14 | 325 | 2.95e-95 | 285 |
| Msa0735130 | MtrunA17_Chr2g0291751 | 47.649 | 319 | 156 | 5 | 2 | 312 | 16 | 331 | 1.25e-93 | 281 |
| Msa0735130 | MtrunA17_Chr2g0292181 | 49.837 | 307 | 143 | 5 | 13 | 311 | 36 | 339 | 1.17e-92 | 279 |
| Msa0735130 | MtrunA17_Chr4g0070951 | 49.355 | 310 | 142 | 6 | 13 | 312 | 26 | 330 | 1.92e-92 | 278 |
| Msa0735130 | MtrunA17_Chr2g0299691 | 47.319 | 317 | 151 | 7 | 6 | 311 | 47 | 358 | 7.62e-91 | 275 |
| Msa0735130 | MtrunA17_Chr7g0258811 | 44.904 | 314 | 161 | 5 | 7 | 311 | 61 | 371 | 2.59e-90 | 274 |
| Msa0735130 | MtrunA17_Chr1g0155611 | 46.557 | 305 | 152 | 4 | 15 | 311 | 46 | 347 | 1.06e-88 | 269 |
| Msa0735130 | MtrunA17_Chr1g0175561 | 43.949 | 314 | 164 | 5 | 7 | 311 | 16 | 326 | 1.21e-88 | 268 |
| Msa0735130 | MtrunA17_Chr2g0292211 | 45.886 | 316 | 160 | 4 | 4 | 311 | 29 | 341 | 9.23e-88 | 267 |
| Msa0735130 | MtrunA17_Chr2g0292111 | 45.312 | 320 | 164 | 4 | 1 | 312 | 15 | 331 | 1.63e-87 | 266 |
| Msa0735130 | MtrunA17_Chr2g0292251 | 46.906 | 307 | 152 | 5 | 13 | 311 | 26 | 329 | 2.38e-87 | 265 |
| Msa0735130 | MtrunA17_Chr2g0292101 | 46.349 | 315 | 158 | 5 | 5 | 311 | 15 | 326 | 5.13e-87 | 264 |
| Msa0735130 | MtrunA17_Chr5g0402571 | 48.889 | 315 | 145 | 10 | 7 | 311 | 18 | 326 | 5.45e-87 | 263 |
| Msa0735130 | MtrunA17_Chr2g0292241 | 46.580 | 307 | 153 | 4 | 13 | 311 | 27 | 330 | 2.25e-86 | 263 |
| Msa0735130 | MtrunA17_Chr2g0292271 | 45.277 | 307 | 157 | 4 | 13 | 311 | 27 | 330 | 4.14e-86 | 262 |
| Msa0735130 | MtrunA17_Chr5g0402581 | 48.254 | 315 | 147 | 10 | 7 | 311 | 18 | 326 | 4.38e-86 | 261 |
| Msa0735130 | MtrunA17_Chr4g0013721 | 46.405 | 306 | 150 | 5 | 13 | 311 | 98 | 396 | 2.22e-85 | 262 |
| Msa0735130 | MtrunA17_Chr5g0400331 | 46.945 | 311 | 146 | 7 | 15 | 311 | 26 | 331 | 3.30e-85 | 259 |
| Msa0735130 | MtrunA17_Chr4g0013821 | 45.455 | 308 | 154 | 5 | 11 | 311 | 24 | 324 | 5.01e-85 | 259 |
| Msa0735130 | MtrunA17_Chr2g0292151 | 45.000 | 320 | 165 | 5 | 1 | 312 | 15 | 331 | 5.83e-85 | 259 |
| Msa0735130 | MtrunA17_Chr4g0068621 | 44.951 | 307 | 159 | 5 | 11 | 311 | 34 | 336 | 1.30e-84 | 258 |
| Msa0735130 | MtrunA17_Chr2g0292291 | 44.516 | 310 | 160 | 6 | 13 | 313 | 28 | 334 | 2.25e-81 | 250 |
| Msa0735130 | MtrunA17_Chr2g0292261 | 44.625 | 307 | 159 | 4 | 13 | 311 | 27 | 330 | 1.36e-79 | 246 |
| Msa0735130 | MtrunA17_Chr5g0421411 | 47.368 | 285 | 136 | 8 | 38 | 311 | 4 | 285 | 1.21e-78 | 241 |
| Msa0735130 | MtrunA17_Chr1g0204011 | 43.949 | 314 | 159 | 10 | 6 | 311 | 18 | 322 | 6.73e-77 | 238 |
| Msa0735130 | MtrunA17_Chr3g0128061 | 42.208 | 308 | 164 | 6 | 13 | 311 | 24 | 326 | 6.69e-75 | 233 |
| Msa0735130 | MtrunA17_Chr1g0188431 | 41.611 | 298 | 164 | 7 | 15 | 311 | 39 | 327 | 1.03e-74 | 232 |
| Msa0735130 | MtrunA17_Chr1g0194271 | 39.394 | 330 | 179 | 6 | 1 | 313 | 17 | 342 | 1.80e-71 | 224 |
| Msa0735130 | MtrunA17_Chr1g0164891 | 40.594 | 303 | 167 | 6 | 19 | 311 | 93 | 392 | 6.85e-71 | 224 |
| Msa0735130 | MtrunA17_Chr7g0268501 | 42.188 | 320 | 166 | 8 | 1 | 311 | 11 | 320 | 2.15e-70 | 221 |
| Msa0735130 | MtrunA17_Chr7g0268521 | 42.188 | 320 | 166 | 8 | 1 | 311 | 11 | 320 | 2.15e-70 | 221 |
| Msa0735130 | MtrunA17_Chr1g0194151 | 38.629 | 321 | 183 | 5 | 1 | 311 | 17 | 333 | 2.18e-70 | 221 |
| Msa0735130 | MtrunA17_Chr6g0477071 | 40.000 | 300 | 170 | 8 | 13 | 311 | 52 | 342 | 3.51e-70 | 221 |
| Msa0735130 | MtrunA17_Chr4g0024121 | 39.688 | 320 | 178 | 8 | 1 | 311 | 13 | 326 | 8.39e-69 | 217 |
| Msa0735130 | MtrunA17_Chr2g0322861 | 40.446 | 314 | 172 | 9 | 7 | 311 | 79 | 386 | 1.29e-68 | 218 |
| Msa0735130 | MtrunA17_Chr5g0405991 | 41.104 | 326 | 164 | 10 | 1 | 311 | 4 | 316 | 1.01e-66 | 211 |
| Msa0735130 | MtrunA17_Chr8g0371381 | 41.368 | 307 | 157 | 9 | 15 | 311 | 26 | 319 | 7.53e-66 | 209 |
| Msa0735130 | MtrunA17_Chr1g0157051 | 40.514 | 311 | 167 | 8 | 8 | 310 | 17 | 317 | 1.23e-65 | 209 |
| Msa0735130 | MtrunA17_Chr7g0225221 | 39.557 | 316 | 180 | 7 | 1 | 311 | 11 | 320 | 3.67e-64 | 205 |
| Msa0735130 | MtrunA17_Chr6g0460711 | 37.342 | 316 | 185 | 7 | 1 | 311 | 7 | 314 | 4.67e-64 | 204 |
| Msa0735130 | MtrunA17_Chr4g0076211 | 40.461 | 304 | 159 | 11 | 19 | 313 | 45 | 335 | 7.43e-63 | 202 |
| Msa0735130 | MtrunA17_Chr5g0432321 | 77.586 | 116 | 26 | 0 | 139 | 254 | 17 | 132 | 1.68e-62 | 194 |
| Msa0735130 | MtrunA17_Chr2g0279041 | 39.672 | 305 | 162 | 9 | 19 | 311 | 31 | 325 | 1.83e-62 | 201 |
| Msa0735130 | MtrunA17_Chr2g0296621 | 42.345 | 307 | 152 | 10 | 15 | 311 | 50 | 341 | 1.03e-61 | 199 |
| Msa0735130 | MtrunA17_Chr1g0148021 | 40.064 | 312 | 164 | 10 | 14 | 311 | 26 | 328 | 2.77e-60 | 195 |
| Msa0735130 | MtrunA17_Chr5g0401431 | 38.511 | 309 | 174 | 7 | 10 | 307 | 22 | 325 | 7.30e-60 | 194 |
| Msa0735130 | MtrunA17_Chr8g0364291 | 37.700 | 313 | 180 | 6 | 11 | 313 | 19 | 326 | 9.10e-60 | 194 |
| Msa0735130 | MtrunA17_Chr4g0053871 | 38.339 | 313 | 180 | 7 | 2 | 307 | 14 | 320 | 1.19e-59 | 193 |
| Msa0735130 | MtrunA17_Chr4g0046131 | 39.739 | 307 | 167 | 9 | 14 | 307 | 41 | 342 | 1.03e-58 | 192 |
| Msa0735130 | MtrunA17_Chr3g0114461 | 51.309 | 191 | 89 | 3 | 122 | 311 | 5 | 192 | 1.79e-58 | 186 |
| Msa0735130 | MtrunA17_Chr4g0072091 | 39.617 | 313 | 162 | 10 | 14 | 311 | 23 | 323 | 1.93e-58 | 190 |
| Msa0735130 | MtrunA17_Chr7g0254201 | 36.601 | 306 | 178 | 8 | 13 | 312 | 18 | 313 | 4.08e-58 | 189 |
| Msa0735130 | MtrunA17_Chr7g0254231 | 36.789 | 299 | 178 | 8 | 15 | 311 | 22 | 311 | 2.65e-57 | 187 |
| Msa0735130 | MtrunA17_Chr1g0197411 | 35.577 | 312 | 185 | 7 | 13 | 313 | 26 | 332 | 4.72e-57 | 187 |
| Msa0735130 | MtrunA17_Chr4g0063671 | 36.111 | 324 | 181 | 10 | 4 | 311 | 7 | 320 | 8.89e-56 | 183 |
| Msa0735130 | MtrunA17_Chr6g0467161 | 36.482 | 307 | 181 | 11 | 10 | 311 | 39 | 336 | 3.57e-53 | 177 |
| Msa0735130 | MtrunA17_Chr2g0329641 | 35.577 | 312 | 178 | 9 | 14 | 312 | 35 | 336 | 5.20e-53 | 177 |
| Msa0735130 | MtrunA17_Chr2g0316481 | 35.799 | 338 | 171 | 10 | 13 | 310 | 74 | 405 | 5.49e-52 | 176 |
| Msa0735130 | MtrunA17_Chr2g0316791 | 35.503 | 338 | 172 | 10 | 13 | 310 | 74 | 405 | 1.29e-51 | 175 |
| Msa0735130 | MtrunA17_Chr6g0451571 | 34.951 | 309 | 185 | 8 | 13 | 311 | 32 | 334 | 3.04e-51 | 172 |
| Msa0735130 | MtrunA17_Chr2g0316831 | 34.615 | 338 | 175 | 9 | 13 | 310 | 110 | 441 | 4.07e-51 | 174 |
| Msa0735130 | MtrunA17_Chr2g0278671 | 36.538 | 312 | 175 | 10 | 13 | 311 | 22 | 323 | 5.22e-51 | 171 |
| Msa0735130 | MtrunA17_Chr2g0316191 | 34.808 | 339 | 174 | 10 | 13 | 310 | 74 | 406 | 1.17e-50 | 172 |
| Msa0735130 | MtrunA17_Chr1g0181511 | 34.967 | 306 | 185 | 7 | 13 | 311 | 25 | 323 | 4.35e-50 | 169 |
| Msa0735130 | MtrunA17_Chr2g0279061 | 40.000 | 265 | 137 | 9 | 59 | 311 | 12 | 266 | 1.02e-48 | 163 |
| Msa0735130 | MtrunA17_Chr3g0136751 | 35.669 | 314 | 183 | 6 | 8 | 311 | 18 | 322 | 2.68e-48 | 164 |
| Msa0735130 | MtrunA17_Chr6g0467121 | 35.948 | 306 | 181 | 10 | 10 | 311 | 69 | 363 | 4.07e-48 | 165 |
| Msa0735130 | MtrunA17_Chr1g0181431 | 33.550 | 307 | 190 | 7 | 12 | 311 | 24 | 323 | 9.63e-48 | 162 |
| Msa0735130 | MtrunA17_Chr1g0181481 | 33.333 | 306 | 190 | 7 | 13 | 311 | 25 | 323 | 3.80e-47 | 161 |
| Msa0735130 | MtrunA17_Chr6g0467251 | 32.667 | 300 | 194 | 6 | 10 | 307 | 31 | 324 | 2.35e-45 | 157 |
| Msa0735130 | MtrunA17_Chr2g0311251 | 33.432 | 338 | 178 | 10 | 13 | 310 | 9 | 339 | 3.26e-45 | 156 |
| Msa0735130 | MtrunA17_Chr5g0413051 | 31.935 | 310 | 193 | 8 | 15 | 311 | 73 | 377 | 2.51e-44 | 155 |
| Msa0735130 | MtrunA17_Chr2g0311241 | 30.504 | 377 | 178 | 9 | 13 | 310 | 58 | 429 | 4.06e-44 | 155 |
| Msa0735130 | MtrunA17_Chr4g0075241 | 29.180 | 305 | 204 | 5 | 14 | 311 | 28 | 327 | 8.19e-44 | 152 |
| Msa0735130 | MtrunA17_Chr2g0292281 | 41.784 | 213 | 106 | 4 | 108 | 313 | 17 | 218 | 1.31e-43 | 149 |
| Msa0735130 | MtrunA17_Chr3g0114491 | 61.818 | 110 | 41 | 1 | 14 | 123 | 17 | 125 | 2.80e-42 | 142 |
| Msa0735130 | MtrunA17_Chr4g0074851 | 31.908 | 304 | 195 | 6 | 15 | 312 | 32 | 329 | 4.98e-42 | 148 |
| Msa0735130 | MtrunA17_Chr5g0432361 | 57.143 | 112 | 43 | 1 | 199 | 310 | 2 | 108 | 1.02e-38 | 132 |
| Msa0735130 | MtrunA17_Chr4g0004591 | 28.086 | 324 | 160 | 7 | 15 | 310 | 77 | 355 | 2.34e-34 | 128 |
| Msa0735130 | MtrunA17_Chr2g0316811 | 35.341 | 249 | 128 | 8 | 13 | 232 | 48 | 292 | 6.79e-33 | 124 |
| Msa0735130 | MtrunA17_Chr2g0316141 | 33.333 | 273 | 153 | 9 | 61 | 310 | 11 | 277 | 6.14e-30 | 114 |
| Msa0735130 | MtrunA17_Chr2g0316181 | 33.333 | 273 | 153 | 9 | 61 | 310 | 11 | 277 | 6.14e-30 | 114 |
| Msa0735130 | MtrunA17_Chr1g0181491 | 40.870 | 115 | 63 | 4 | 13 | 126 | 10 | 120 | 1.80e-20 | 86.3 |
| Msa0735130 | MtrunA17_Chr3g0104101 | 39.007 | 141 | 75 | 5 | 182 | 311 | 9 | 149 | 3.42e-20 | 85.5 |
| Msa0735130 | MtrunA17_Chr1g0181501 | 28.889 | 180 | 119 | 4 | 138 | 311 | 13 | 189 | 1.02e-16 | 77.0 |
| Msa0735130 | MtrunA17_Chr6g0468731 | 50.685 | 73 | 31 | 3 | 54 | 126 | 22 | 89 | 1.44e-16 | 73.9 |
| Msa0735130 | MtrunA17_Chr1g0196191 | 52.941 | 68 | 30 | 2 | 57 | 124 | 27 | 92 | 1.01e-14 | 70.5 |
| Msa0735130 | MtrunA17_Chr4g0013811 | 43.243 | 74 | 41 | 1 | 128 | 201 | 6 | 78 | 4.13e-11 | 58.5 |
| Msa0735130 | MtrunA17_Chr4g0037131 | 29.381 | 194 | 98 | 6 | 104 | 293 | 85 | 243 | 6.24e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735130 | AT5G05340.1 | 53.311 | 302 | 133 | 5 | 13 | 311 | 28 | 324 | 5.42e-110 | 322 |
| Msa0735130 | AT2G18150.1 | 50.325 | 308 | 141 | 5 | 13 | 312 | 34 | 337 | 1.05e-103 | 307 |
| Msa0735130 | AT1G14550.1 | 50.949 | 316 | 146 | 7 | 1 | 311 | 10 | 321 | 3.57e-102 | 302 |
| Msa0735130 | AT2G18140.1 | 50.492 | 305 | 139 | 5 | 15 | 311 | 35 | 335 | 9.09e-100 | 297 |
| Msa0735130 | AT5G58390.1 | 52.063 | 315 | 142 | 6 | 1 | 311 | 7 | 316 | 1.30e-98 | 293 |
| Msa0735130 | AT5G58400.1 | 50.165 | 303 | 142 | 6 | 13 | 311 | 28 | 325 | 1.80e-98 | 293 |
| Msa0735130 | AT5G66390.1 | 50.327 | 306 | 140 | 5 | 15 | 312 | 33 | 334 | 8.60e-98 | 292 |
| Msa0735130 | AT4G36430.1 | 49.511 | 307 | 143 | 5 | 13 | 311 | 28 | 330 | 2.25e-97 | 291 |
| Msa0735130 | AT1G14540.1 | 48.173 | 301 | 150 | 5 | 13 | 311 | 19 | 315 | 3.02e-95 | 285 |
| Msa0735130 | AT1G44970.1 | 49.186 | 307 | 145 | 5 | 13 | 311 | 43 | 346 | 1.16e-93 | 281 |
| Msa0735130 | AT5G06720.1 | 44.514 | 319 | 166 | 4 | 1 | 311 | 18 | 333 | 9.03e-92 | 276 |
| Msa0735130 | AT3G50990.1 | 46.154 | 312 | 156 | 5 | 9 | 312 | 35 | 342 | 1.41e-91 | 276 |
| Msa0735130 | AT4G08770.1 | 48.220 | 309 | 147 | 6 | 13 | 311 | 22 | 327 | 3.11e-91 | 275 |
| Msa0735130 | AT3G32980.1 | 47.249 | 309 | 150 | 6 | 13 | 311 | 29 | 334 | 9.31e-89 | 269 |
| Msa0735130 | AT4G08780.1 | 47.249 | 309 | 150 | 6 | 13 | 311 | 22 | 327 | 4.30e-88 | 267 |
| Msa0735130 | AT2G38390.1 | 47.078 | 308 | 151 | 5 | 13 | 311 | 29 | 333 | 1.14e-87 | 266 |
| Msa0735130 | AT5G19890.1 | 46.417 | 321 | 151 | 10 | 3 | 312 | 18 | 328 | 3.18e-87 | 265 |
| Msa0735130 | AT3G49110.1 | 46.602 | 309 | 152 | 6 | 13 | 311 | 31 | 336 | 3.29e-87 | 265 |
| Msa0735130 | AT5G06730.1 | 43.260 | 319 | 170 | 4 | 1 | 311 | 19 | 334 | 4.29e-87 | 265 |
| Msa0735130 | AT3G49120.1 | 46.006 | 313 | 156 | 6 | 9 | 311 | 26 | 335 | 5.93e-87 | 265 |
| Msa0735130 | AT2G38380.1 | 46.753 | 308 | 152 | 5 | 13 | 311 | 29 | 333 | 7.73e-86 | 262 |
| Msa0735130 | AT4G16270.1 | 46.512 | 301 | 145 | 7 | 20 | 311 | 55 | 348 | 4.52e-82 | 252 |
| Msa0735130 | AT2G35380.1 | 46.129 | 310 | 150 | 6 | 15 | 311 | 30 | 335 | 1.06e-81 | 251 |
| Msa0735130 | AT1G49570.1 | 46.078 | 306 | 149 | 8 | 13 | 307 | 46 | 346 | 2.14e-81 | 250 |
| Msa0735130 | AT2G22420.1 | 40.994 | 322 | 172 | 8 | 1 | 312 | 7 | 320 | 9.21e-80 | 246 |
| Msa0735130 | AT1G68850.1 | 44.013 | 309 | 158 | 8 | 15 | 311 | 30 | 335 | 1.53e-79 | 245 |
| Msa0735130 | AT5G51890.1 | 44.268 | 314 | 157 | 10 | 7 | 311 | 18 | 322 | 9.40e-79 | 243 |
| Msa0735130 | AT1G71695.1 | 42.671 | 307 | 167 | 6 | 9 | 311 | 38 | 339 | 9.91e-79 | 244 |
| Msa0735130 | AT3G01190.1 | 43.750 | 304 | 156 | 7 | 15 | 311 | 26 | 321 | 2.22e-75 | 234 |
| Msa0735130 | AT5G19880.1 | 42.492 | 313 | 160 | 7 | 13 | 311 | 23 | 329 | 1.80e-74 | 232 |
| Msa0735130 | AT5G15180.1 | 43.269 | 312 | 163 | 7 | 8 | 311 | 24 | 329 | 1.60e-73 | 229 |
| Msa0735130 | AT1G05240.1 | 43.000 | 300 | 154 | 7 | 18 | 307 | 29 | 321 | 7.18e-73 | 228 |
| Msa0735130 | AT1G05250.1 | 43.000 | 300 | 154 | 7 | 18 | 307 | 29 | 321 | 7.18e-73 | 228 |
| Msa0735130 | AT5G42180.1 | 41.509 | 318 | 168 | 9 | 1 | 310 | 9 | 316 | 2.19e-70 | 221 |
| Msa0735130 | AT4G33420.1 | 40.940 | 298 | 166 | 7 | 15 | 311 | 37 | 325 | 2.32e-68 | 216 |
| Msa0735130 | AT4G11290.1 | 39.938 | 323 | 169 | 10 | 1 | 311 | 17 | 326 | 2.81e-68 | 216 |
| Msa0735130 | AT5G64120.1 | 41.667 | 300 | 158 | 8 | 19 | 311 | 39 | 328 | 5.93e-68 | 215 |
| Msa0735130 | AT3G03670.1 | 37.975 | 316 | 176 | 8 | 7 | 311 | 15 | 321 | 7.22e-68 | 215 |
| Msa0735130 | AT4G33420.2 | 40.940 | 298 | 166 | 7 | 15 | 311 | 84 | 372 | 1.28e-67 | 216 |
| Msa0735130 | AT3G21770.1 | 40.323 | 310 | 170 | 8 | 7 | 307 | 21 | 324 | 2.52e-66 | 211 |
| Msa0735130 | AT1G05260.1 | 37.898 | 314 | 180 | 8 | 7 | 311 | 18 | 325 | 4.42e-66 | 210 |
| Msa0735130 | AT5G17820.1 | 37.380 | 313 | 173 | 9 | 7 | 311 | 16 | 313 | 2.29e-61 | 198 |
| Msa0735130 | AT5G17820.2 | 37.380 | 313 | 173 | 9 | 7 | 311 | 69 | 366 | 1.65e-60 | 197 |
| Msa0735130 | AT5G40150.1 | 36.624 | 314 | 189 | 6 | 3 | 311 | 20 | 328 | 4.90e-60 | 195 |
| Msa0735130 | AT1G30870.1 | 40.584 | 308 | 159 | 11 | 15 | 311 | 51 | 345 | 7.63e-60 | 195 |
| Msa0735130 | AT3G28200.1 | 36.634 | 303 | 183 | 6 | 13 | 311 | 19 | 316 | 1.90e-59 | 193 |
| Msa0735130 | AT4G26010.1 | 36.808 | 307 | 180 | 10 | 8 | 311 | 14 | 309 | 5.24e-59 | 192 |
| Msa0735130 | AT4G26010.2 | 36.808 | 307 | 180 | 10 | 8 | 311 | 42 | 337 | 7.86e-59 | 192 |
| Msa0735130 | AT5G39580.1 | 39.203 | 301 | 165 | 9 | 19 | 311 | 29 | 319 | 5.47e-58 | 189 |
| Msa0735130 | AT4G37530.1 | 38.339 | 313 | 171 | 8 | 13 | 311 | 25 | 329 | 7.34e-58 | 189 |
| Msa0735130 | AT4G17690.1 | 37.580 | 314 | 184 | 7 | 6 | 313 | 17 | 324 | 7.37e-58 | 189 |
| Msa0735130 | AT2G35380.2 | 44.800 | 250 | 121 | 6 | 75 | 311 | 2 | 247 | 1.53e-57 | 186 |
| Msa0735130 | AT5G47000.1 | 36.250 | 320 | 191 | 7 | 1 | 313 | 19 | 332 | 1.53e-57 | 189 |
| Msa0735130 | AT2G41480.1 | 37.742 | 310 | 170 | 9 | 15 | 311 | 29 | 328 | 2.76e-57 | 188 |
| Msa0735130 | AT2G39040.1 | 38.978 | 313 | 171 | 8 | 13 | 311 | 44 | 350 | 9.84e-57 | 187 |
| Msa0735130 | AT5G22410.1 | 34.528 | 307 | 180 | 9 | 13 | 308 | 26 | 322 | 1.66e-56 | 186 |
| Msa0735130 | AT1G24110.1 | 36.250 | 320 | 186 | 8 | 4 | 311 | 9 | 322 | 1.86e-56 | 186 |
| Msa0735130 | AT5G64100.1 | 37.624 | 303 | 169 | 9 | 18 | 311 | 40 | 331 | 3.06e-56 | 185 |
| Msa0735130 | AT1G34510.1 | 35.599 | 309 | 188 | 8 | 4 | 311 | 11 | 309 | 1.33e-55 | 183 |
| Msa0735130 | AT5G64110.1 | 39.274 | 303 | 164 | 9 | 19 | 311 | 38 | 330 | 2.36e-55 | 183 |
| Msa0735130 | AT5G67400.1 | 39.172 | 314 | 171 | 9 | 11 | 311 | 23 | 329 | 2.45e-55 | 183 |
| Msa0735130 | AT4G30170.1 | 38.585 | 311 | 169 | 10 | 13 | 311 | 25 | 325 | 3.00e-55 | 182 |
| Msa0735130 | AT2G18980.1 | 38.050 | 318 | 169 | 11 | 9 | 311 | 19 | 323 | 3.72e-55 | 182 |
| Msa0735130 | AT3G49960.1 | 38.924 | 316 | 169 | 11 | 11 | 311 | 23 | 329 | 1.13e-53 | 178 |
| Msa0735130 | AT4G37520.1 | 35.987 | 314 | 177 | 7 | 13 | 311 | 25 | 329 | 2.34e-53 | 177 |
| Msa0735130 | AT2G34060.1 | 37.338 | 308 | 175 | 9 | 14 | 308 | 41 | 343 | 1.01e-52 | 176 |
| Msa0735130 | AT5G14130.1 | 35.737 | 319 | 181 | 9 | 6 | 311 | 23 | 330 | 5.85e-52 | 174 |
| Msa0735130 | AT4G31760.1 | 34.579 | 321 | 191 | 7 | 1 | 311 | 15 | 326 | 7.75e-52 | 174 |
| Msa0735130 | AT4G33870.1 | 32.641 | 337 | 176 | 9 | 18 | 310 | 71 | 400 | 7.95e-52 | 176 |
| Msa0735130 | AT2G24800.1 | 35.897 | 312 | 178 | 7 | 12 | 311 | 28 | 329 | 1.09e-51 | 173 |
| Msa0735130 | AT5G14130.2 | 35.737 | 319 | 181 | 9 | 6 | 311 | 64 | 371 | 1.43e-51 | 174 |
| Msa0735130 | AT4G37520.2 | 35.669 | 314 | 175 | 8 | 13 | 311 | 25 | 326 | 2.91e-51 | 172 |
| Msa0735130 | AT1G77100.1 | 36.335 | 322 | 182 | 12 | 1 | 311 | 10 | 319 | 3.35e-51 | 172 |
| Msa0735130 | AT4G25980.1 | 34.295 | 312 | 187 | 8 | 11 | 311 | 22 | 326 | 9.95e-50 | 168 |
| Msa0735130 | AT4G37530.2 | 38.846 | 260 | 139 | 7 | 13 | 258 | 25 | 278 | 1.41e-48 | 164 |
| Msa0735130 | AT2G43480.1 | 32.919 | 322 | 190 | 10 | 5 | 311 | 25 | 335 | 2.33e-48 | 165 |
| Msa0735130 | AT5G24070.1 | 33.538 | 325 | 189 | 11 | 2 | 311 | 23 | 335 | 3.37e-47 | 162 |
| Msa0735130 | AT3G17070.1 | 31.410 | 312 | 189 | 8 | 15 | 311 | 38 | 339 | 8.11e-44 | 153 |
| Msa0735130 | AT2G37130.2 | 33.333 | 300 | 189 | 6 | 18 | 311 | 2 | 296 | 8.82e-44 | 152 |
| Msa0735130 | AT2G37130.1 | 33.115 | 305 | 193 | 6 | 13 | 311 | 28 | 327 | 9.25e-44 | 152 |
| Msa0735130 | AT4G21960.1 | 31.250 | 304 | 197 | 6 | 15 | 312 | 31 | 328 | 6.32e-42 | 148 |
| Msa0735130 | AT4G25980.2 | 40.782 | 179 | 99 | 5 | 11 | 189 | 67 | 238 | 6.98e-36 | 131 |
| Msa0735130 | AT5G39580.2 | 41.379 | 174 | 94 | 5 | 19 | 192 | 29 | 194 | 1.45e-32 | 121 |
| Msa0735130 | AT2G24800.2 | 40.116 | 172 | 96 | 3 | 12 | 183 | 28 | 192 | 1.04e-30 | 116 |
| Msa0735130 | AT3G17070.2 | 28.169 | 284 | 178 | 9 | 43 | 311 | 4 | 276 | 7.40e-29 | 112 |
| Msa0735130 | AT4G35000.1 | 27.734 | 256 | 127 | 10 | 49 | 293 | 34 | 242 | 9.66e-12 | 65.1 |
Find 48 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAACAACTAAGTCTTTA+AGG | 0.059473 | 5_1:+50160282 | None:intergenic |
| TAAGGCTTTGTTGCATAAAA+AGG | 0.123833 | 5_1:-50160081 | Msa0735130:CDS |
| CCACTAAGTGAATTGATATT+TGG | 0.177899 | 5_1:+50160827 | None:intergenic |
| TATTCTTCTTCATTCATATT+TGG | 0.210525 | 5_1:+50159871 | None:intergenic |
| TTGCAAATGGGCTGCATAAT+TGG | 0.262012 | 5_1:+50160184 | None:intergenic |
| CCAAATATCAATTCACTTAG+TGG | 0.276195 | 5_1:-50160827 | Msa0735130:CDS |
| AAAGACTTAGTTGTTCTATC+AGG | 0.308669 | 5_1:-50160278 | Msa0735130:CDS |
| GTCTTTAAGGTTTAGTCCTT+GGG | 0.314864 | 5_1:+50160295 | None:intergenic |
| AGTTGGGCGGGCACAAATAT+TGG | 0.345153 | 5_1:-50160430 | Msa0735130:CDS |
| TTAACAACTGACTTTATGAT+TGG | 0.366348 | 5_1:+50161507 | None:intergenic |
| GGTAACATAAAGCCACTTAC+TGG | 0.367876 | 5_1:-50159933 | Msa0735130:CDS |
| AGTCTTTAAGGTTTAGTCCT+TGG | 0.380171 | 5_1:+50160294 | None:intergenic |
| CAAAAGGCATGCCCTCGAAT+TGG | 0.405243 | 5_1:-50160164 | Msa0735130:CDS |
| GTGAGATCAGGTGCAATTGC+AGG | 0.409083 | 5_1:-50159902 | Msa0735130:CDS |
| AGTTGACACAAAATACTATA+AGG | 0.410019 | 5_1:-50160099 | Msa0735130:CDS |
| CTATCAGGTGGTCACACAAT+TGG | 0.412653 | 5_1:-50160263 | Msa0735130:CDS |
| TTTATGATTGGCAATGCCTT+AGG | 0.413524 | 5_1:+50161519 | None:intergenic |
| GATGACACCCCTACCTTCAT+TGG | 0.418695 | 5_1:-50160866 | Msa0735130:CDS |
| TGCATAATTGGTGTCTATGC+TGG | 0.422494 | 5_1:+50160196 | None:intergenic |
| TGGAGTTTCTATGATTAAGA+TGG | 0.424465 | 5_1:-50159955 | Msa0735130:CDS |
| TATTGGTACCAAGTGTTACT+AGG | 0.448839 | 5_1:-50160413 | Msa0735130:CDS |
| GATGCACTAAGTTTAGAGAT+AGG | 0.461488 | 5_1:-50160232 | Msa0735130:CDS |
| GGAGTTTCTATGATTAAGAT+GGG | 0.461747 | 5_1:-50159954 | Msa0735130:CDS |
| TTATGACAAAATTTGTCCTA+AGG | 0.469907 | 5_1:-50161535 | Msa0735130:CDS |
| ATATCTGCACATGATATGAT+AGG | 0.478245 | 5_1:+50160752 | None:intergenic |
| TGCAGTCTTCTCACCAATGA+AGG | 0.489963 | 5_1:+50160853 | None:intergenic |
| CTTGAAGGAGTAGAATCAAA+TGG | 0.501343 | 5_1:+50160122 | None:intergenic |
| AAGGCATGCCCTCGAATTGG+CGG | 0.502746 | 5_1:-50160161 | Msa0735130:CDS |
| CTCTTCTGCCTAGTAACACT+TGG | 0.506991 | 5_1:+50160405 | None:intergenic |
| TTATGCAGCCCATTTGCAAA+AGG | 0.509133 | 5_1:-50160180 | Msa0735130:CDS |
| TTGTCATCGCCGCCAATTCG+AGG | 0.516204 | 5_1:+50160152 | None:intergenic |
| GACTTAGTTGTTCTATCAGG+TGG | 0.517937 | 5_1:-50160275 | Msa0735130:CDS |
| GCATCAATTAACAGTTGGGC+GGG | 0.532226 | 5_1:-50160442 | Msa0735130:intron |
| TCTTCTCACCAATGAAGGTA+GGG | 0.536322 | 5_1:+50160858 | None:intergenic |
| AAAGCTCTTGATCAGAATGA+AGG | 0.549289 | 5_1:+50160054 | None:intergenic |
| AATTATTCGTGAGCCACGCA+TGG | 0.561525 | 5_1:-50161478 | Msa0735130:CDS |
| TGGTTCACAAAGTGATAGAT+TGG | 0.576525 | 5_1:-50160021 | Msa0735130:CDS |
| GTAACATAAAGCCACTTACT+GGG | 0.585077 | 5_1:-50159932 | Msa0735130:CDS |
| GTCTTCTCACCAATGAAGGT+AGG | 0.586272 | 5_1:+50160857 | None:intergenic |
| GTGAAACTACAGGGTTGTGA+TGG | 0.586550 | 5_1:-50160902 | Msa0735130:intron |
| TGTCATCGCCGCCAATTCGA+GGG | 0.587668 | 5_1:+50160153 | None:intergenic |
| ATTAGGAGTGAGCTTTGCAA+TGG | 0.596037 | 5_1:+50161560 | None:intergenic |
| AGCAACGATGCTCCCATGCG+TGG | 0.600639 | 5_1:+50161465 | None:intergenic |
| GGAGTGAGCTTTGCAATGGT+AGG | 0.607452 | 5_1:+50161564 | None:intergenic |
| TGCATCAATTAACAGTTGGG+CGG | 0.611593 | 5_1:-50160443 | Msa0735130:intron |
| ATTATTCGTGAGCCACGCAT+GGG | 0.612352 | 5_1:-50161477 | Msa0735130:CDS |
| CTTCTCACCAATGAAGGTAG+GGG | 0.615489 | 5_1:+50160859 | None:intergenic |
| TTTACAAGCTTTGTCGACAG+CGG | 0.657875 | 5_1:+50160778 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACAAATTTTGAATAAAAA+AGG | + | chr5_1:50160444-50160463 | None:intergenic | 10.0% |
| !! | ATGTATTAATTATTCTATAA+TGG | + | chr5_1:50160546-50160565 | None:intergenic | 10.0% |
| !!! | ATACAAATTTTGAATAAAAA+AGG | + | chr5_1:50160444-50160463 | None:intergenic | 10.0% |
| !! | ATGTATTAATTATTCTATAA+TGG | + | chr5_1:50160546-50160565 | None:intergenic | 10.0% |
| !!! | CAAATTTTGTCATAATAATT+AGG | + | chr5_1:50159935-50159954 | None:intergenic | 15.0% |
| !!! | CAAATTTTGTCATAATAATT+AGG | + | chr5_1:50159935-50159954 | None:intergenic | 15.0% |
| !! | AAATTATAGTTGCAACATAT+TGG | + | chr5_1:50160793-50160812 | None:intergenic | 20.0% |
| !! | AAATTATAGTTGCAACATAT+TGG | + | chr5_1:50160793-50160812 | None:intergenic | 20.0% |
| ! | TTATGACAAAATTTGTCCTA+AGG | - | chr5_1:50159940-50159959 | Msa0735130:CDS | 25.0% |
| !! | TTAACAACTGACTTTATGAT+TGG | + | chr5_1:50159971-50159990 | None:intergenic | 25.0% |
| !! | AGCTATAAGAAAAAAGTACA+TGG | + | chr5_1:50160120-50160139 | None:intergenic | 25.0% |
| !! | AACAAGTTGAATACATAACA+TGG | - | chr5_1:50160216-50160235 | Msa0735130:CDS | 25.0% |
| !!! | GGAAACCTAATTTATTTTTC+CGG | + | chr5_1:50160318-50160337 | None:intergenic | 25.0% |
| ! | CATATTGGAAATACTTACTA+TGG | + | chr5_1:50160778-50160797 | None:intergenic | 25.0% |
| !! | TTTTATATTGTGGTAAAGTG+CGG | + | chr5_1:50160819-50160838 | None:intergenic | 25.0% |
| !!! | GCTTCTAGTTCTTAATAATT+TGG | - | chr5_1:50160884-50160903 | Msa0735130:CDS | 25.0% |
| !! | ATTTTGCATCAATTAACAGT+TGG | - | chr5_1:50161028-50161047 | Msa0735130:intron | 25.0% |
| !! | TTTTGCATCAATTAACAGTT+GGG | - | chr5_1:50161029-50161048 | Msa0735130:intron | 25.0% |
| ! | ATAGAACAACTAAGTCTTTA+AGG | + | chr5_1:50161196-50161215 | None:intergenic | 25.0% |
| ! | AGTTGACACAAAATACTATA+AGG | - | chr5_1:50161376-50161395 | Msa0735130:intron | 25.0% |
| ! | TTATGACAAAATTTGTCCTA+AGG | - | chr5_1:50159940-50159959 | Msa0735130:CDS | 25.0% |
| !! | TTAACAACTGACTTTATGAT+TGG | + | chr5_1:50159971-50159990 | None:intergenic | 25.0% |
| !! | AGCTATAAGAAAAAAGTACA+TGG | + | chr5_1:50160120-50160139 | None:intergenic | 25.0% |
| !! | AACAAGTTGAATACATAACA+TGG | - | chr5_1:50160216-50160235 | Msa0735130:CDS | 25.0% |
| !!! | GGAAACCTAATTTATTTTTC+CGG | + | chr5_1:50160318-50160337 | None:intergenic | 25.0% |
| ! | CATATTGGAAATACTTACTA+TGG | + | chr5_1:50160778-50160797 | None:intergenic | 25.0% |
| !! | TTTTATATTGTGGTAAAGTG+CGG | + | chr5_1:50160819-50160838 | None:intergenic | 25.0% |
| !!! | GCTTCTAGTTCTTAATAATT+TGG | - | chr5_1:50160884-50160903 | Msa0735130:CDS | 25.0% |
| !! | ATTTTGCATCAATTAACAGT+TGG | - | chr5_1:50161028-50161047 | Msa0735130:intron | 25.0% |
| !! | TTTTGCATCAATTAACAGTT+GGG | - | chr5_1:50161029-50161048 | Msa0735130:intron | 25.0% |
| ! | ATAGAACAACTAAGTCTTTA+AGG | + | chr5_1:50161196-50161215 | None:intergenic | 25.0% |
| ! | AGTTGACACAAAATACTATA+AGG | - | chr5_1:50161376-50161395 | Msa0735130:intron | 25.0% |
| TAAAAAAGTTGAATTGTCGC+CGG | - | chr5_1:50160296-50160315 | Msa0735130:CDS | 30.0% | |
| AACATGAAATCCACTTGTAA+GGG | + | chr5_1:50160358-50160377 | None:intergenic | 30.0% | |
| TAGAGCAACATAAGAATAGT+AGG | - | chr5_1:50160383-50160402 | Msa0735130:CDS | 30.0% | |
| ATGAACTATGTGAAACTACA+GGG | - | chr5_1:50160564-50160583 | Msa0735130:intron | 30.0% | |
| CCACTAAGTGAATTGATATT+TGG | + | chr5_1:50160651-50160670 | None:intergenic | 30.0% | |
| CCAAATATCAATTCACTTAG+TGG | - | chr5_1:50160648-50160667 | Msa0735130:intron | 30.0% | |
| ATATCTGCACATGATATGAT+AGG | + | chr5_1:50160726-50160745 | None:intergenic | 30.0% | |
| ! | CGCTGTAAACTTTTATATTG+TGG | + | chr5_1:50160829-50160848 | None:intergenic | 30.0% |
| !! | AGAAGCGTGATTTTAAATTG+CGG | + | chr5_1:50160870-50160889 | None:intergenic | 30.0% |
| GATATTACAAAAACTTCGAG+AGG | - | chr5_1:50160943-50160962 | Msa0735130:intron | 30.0% | |
| TGTGAGAAGTTAAAAAATGC+TGG | + | chr5_1:50161140-50161159 | None:intergenic | 30.0% | |
| AAAGACTTAGTTGTTCTATC+AGG | - | chr5_1:50161197-50161216 | Msa0735130:intron | 30.0% | |
| ! | TATTTTGTGTCAACTCTTGA+AGG | + | chr5_1:50161371-50161390 | None:intergenic | 30.0% |
| !! | TAAGGCTTTGTTGCATAAAA+AGG | - | chr5_1:50161394-50161413 | Msa0735130:intron | 30.0% |
| !! | AAGGCTTTGTTGCATAAAAA+GGG | - | chr5_1:50161395-50161414 | Msa0735130:intron | 30.0% |
| ! | CATGCTTTTGCTTATGATTT+TGG | - | chr5_1:50161500-50161519 | Msa0735130:CDS | 30.0% |
| TGGAGTTTCTATGATTAAGA+TGG | - | chr5_1:50161520-50161539 | Msa0735130:CDS | 30.0% | |
| GGAGTTTCTATGATTAAGAT+GGG | - | chr5_1:50161521-50161540 | Msa0735130:CDS | 30.0% | |
| TAAAAAAGTTGAATTGTCGC+CGG | - | chr5_1:50160296-50160315 | Msa0735130:CDS | 30.0% | |
| AACATGAAATCCACTTGTAA+GGG | + | chr5_1:50160358-50160377 | None:intergenic | 30.0% | |
| TAGAGCAACATAAGAATAGT+AGG | - | chr5_1:50160383-50160402 | Msa0735130:CDS | 30.0% | |
| ATGAACTATGTGAAACTACA+GGG | - | chr5_1:50160564-50160583 | Msa0735130:intron | 30.0% | |
| CCACTAAGTGAATTGATATT+TGG | + | chr5_1:50160651-50160670 | None:intergenic | 30.0% | |
| CCAAATATCAATTCACTTAG+TGG | - | chr5_1:50160648-50160667 | Msa0735130:intron | 30.0% | |
| ATATCTGCACATGATATGAT+AGG | + | chr5_1:50160726-50160745 | None:intergenic | 30.0% | |
| ! | CGCTGTAAACTTTTATATTG+TGG | + | chr5_1:50160829-50160848 | None:intergenic | 30.0% |
| !! | AGAAGCGTGATTTTAAATTG+CGG | + | chr5_1:50160870-50160889 | None:intergenic | 30.0% |
| GATATTACAAAAACTTCGAG+AGG | - | chr5_1:50160943-50160962 | Msa0735130:intron | 30.0% | |
| TGTGAGAAGTTAAAAAATGC+TGG | + | chr5_1:50161140-50161159 | None:intergenic | 30.0% | |
| AAAGACTTAGTTGTTCTATC+AGG | - | chr5_1:50161197-50161216 | Msa0735130:intron | 30.0% | |
| ! | TATTTTGTGTCAACTCTTGA+AGG | + | chr5_1:50161371-50161390 | None:intergenic | 30.0% |
| !! | TAAGGCTTTGTTGCATAAAA+AGG | - | chr5_1:50161394-50161413 | Msa0735130:intron | 30.0% |
| !! | AAGGCTTTGTTGCATAAAAA+GGG | - | chr5_1:50161395-50161414 | Msa0735130:intron | 30.0% |
| ! | CATGCTTTTGCTTATGATTT+TGG | - | chr5_1:50161500-50161519 | Msa0735130:CDS | 30.0% |
| TGGAGTTTCTATGATTAAGA+TGG | - | chr5_1:50161520-50161539 | Msa0735130:CDS | 30.0% | |
| GGAGTTTCTATGATTAAGAT+GGG | - | chr5_1:50161521-50161540 | Msa0735130:CDS | 30.0% | |
| TTTATGATTGGCAATGCCTT+AGG | + | chr5_1:50159959-50159978 | None:intergenic | 35.0% | |
| ! | TCAACTTGTTTGATGAGCTA+AGG | + | chr5_1:50160206-50160225 | None:intergenic | 35.0% |
| TGTCGCCGGAAAAATAAATT+AGG | - | chr5_1:50160310-50160329 | Msa0735130:CDS | 35.0% | |
| CAACATGAAATCCACTTGTA+AGG | + | chr5_1:50160359-50160378 | None:intergenic | 35.0% | |
| AGCAACATAAGAATAGTAGG+TGG | - | chr5_1:50160386-50160405 | Msa0735130:CDS | 35.0% | |
| CATGAACTATGTGAAACTAC+AGG | - | chr5_1:50160563-50160582 | Msa0735130:intron | 35.0% | |
| !! | CAATTCACTTAGTGGTTTTG+AGG | - | chr5_1:50160656-50160675 | Msa0735130:intron | 35.0% |
| ! | GAAGCGTGATTTTAAATTGC+GGG | + | chr5_1:50160869-50160888 | None:intergenic | 35.0% |
| AACTTGCGATTACAATTGGA+GGG | + | chr5_1:50160983-50161002 | None:intergenic | 35.0% | |
| GAACAACTTGCGATTACAAT+TGG | + | chr5_1:50160987-50161006 | None:intergenic | 35.0% | |
| ! | TATTGGTACCAAGTGTTACT+AGG | - | chr5_1:50161062-50161081 | Msa0735130:intron | 35.0% |
| GAGAAGTTAAAAAATGCTGG+TGG | + | chr5_1:50161137-50161156 | None:intergenic | 35.0% | |
| ! | ATCACAAATTTTCAGTCCCA+AGG | - | chr5_1:50161164-50161183 | Msa0735130:intron | 35.0% |
| !! | GTCTTTAAGGTTTAGTCCTT+GGG | + | chr5_1:50161183-50161202 | None:intergenic | 35.0% |
| !! | AGTCTTTAAGGTTTAGTCCT+TGG | + | chr5_1:50161184-50161203 | None:intergenic | 35.0% |
| GATGCACTAAGTTTAGAGAT+AGG | - | chr5_1:50161243-50161262 | Msa0735130:intron | 35.0% | |
| CTTGAAGGAGTAGAATCAAA+TGG | + | chr5_1:50161356-50161375 | None:intergenic | 35.0% | |
| AAAGCTCTTGATCAGAATGA+AGG | + | chr5_1:50161424-50161443 | None:intergenic | 35.0% | |
| ! | TCTGATCAAGAGCTTTTCAA+AGG | - | chr5_1:50161428-50161447 | Msa0735130:intron | 35.0% |
| TGGTTCACAAAGTGATAGAT+TGG | - | chr5_1:50161454-50161473 | Msa0735130:CDS | 35.0% | |
| GTAACATAAAGCCACTTACT+GGG | - | chr5_1:50161543-50161562 | Msa0735130:CDS | 35.0% | |
| TTTATGATTGGCAATGCCTT+AGG | + | chr5_1:50159959-50159978 | None:intergenic | 35.0% | |
| ! | TCAACTTGTTTGATGAGCTA+AGG | + | chr5_1:50160206-50160225 | None:intergenic | 35.0% |
| TGTCGCCGGAAAAATAAATT+AGG | - | chr5_1:50160310-50160329 | Msa0735130:CDS | 35.0% | |
| CAACATGAAATCCACTTGTA+AGG | + | chr5_1:50160359-50160378 | None:intergenic | 35.0% | |
| AGCAACATAAGAATAGTAGG+TGG | - | chr5_1:50160386-50160405 | Msa0735130:CDS | 35.0% | |
| CATGAACTATGTGAAACTAC+AGG | - | chr5_1:50160563-50160582 | Msa0735130:intron | 35.0% | |
| !! | CAATTCACTTAGTGGTTTTG+AGG | - | chr5_1:50160656-50160675 | Msa0735130:intron | 35.0% |
| ! | GAAGCGTGATTTTAAATTGC+GGG | + | chr5_1:50160869-50160888 | None:intergenic | 35.0% |
| AACTTGCGATTACAATTGGA+GGG | + | chr5_1:50160983-50161002 | None:intergenic | 35.0% | |
| GAACAACTTGCGATTACAAT+TGG | + | chr5_1:50160987-50161006 | None:intergenic | 35.0% | |
| ! | TATTGGTACCAAGTGTTACT+AGG | - | chr5_1:50161062-50161081 | Msa0735130:intron | 35.0% |
| GAGAAGTTAAAAAATGCTGG+TGG | + | chr5_1:50161137-50161156 | None:intergenic | 35.0% | |
| ! | ATCACAAATTTTCAGTCCCA+AGG | - | chr5_1:50161164-50161183 | Msa0735130:intron | 35.0% |
| !! | GTCTTTAAGGTTTAGTCCTT+GGG | + | chr5_1:50161183-50161202 | None:intergenic | 35.0% |
| !! | AGTCTTTAAGGTTTAGTCCT+TGG | + | chr5_1:50161184-50161203 | None:intergenic | 35.0% |
| GATGCACTAAGTTTAGAGAT+AGG | - | chr5_1:50161243-50161262 | Msa0735130:intron | 35.0% | |
| CTTGAAGGAGTAGAATCAAA+TGG | + | chr5_1:50161356-50161375 | None:intergenic | 35.0% | |
| AAAGCTCTTGATCAGAATGA+AGG | + | chr5_1:50161424-50161443 | None:intergenic | 35.0% | |
| ! | TCTGATCAAGAGCTTTTCAA+AGG | - | chr5_1:50161428-50161447 | Msa0735130:intron | 35.0% |
| TGGTTCACAAAGTGATAGAT+TGG | - | chr5_1:50161454-50161473 | Msa0735130:CDS | 35.0% | |
| GTAACATAAAGCCACTTACT+GGG | - | chr5_1:50161543-50161562 | Msa0735130:CDS | 35.0% | |
| ATTAGGAGTGAGCTTTGCAA+TGG | + | chr5_1:50159918-50159937 | None:intergenic | 40.0% | |
| TCTTCTCACCAATGAAGGTA+GGG | + | chr5_1:50160620-50160639 | None:intergenic | 40.0% | |
| ! | TTTACAAGCTTTGTCGACAG+CGG | + | chr5_1:50160700-50160719 | None:intergenic | 40.0% |
| CAACTTGCGATTACAATTGG+AGG | + | chr5_1:50160984-50161003 | None:intergenic | 40.0% | |
| TGCATCAATTAACAGTTGGG+CGG | - | chr5_1:50161032-50161051 | Msa0735130:intron | 40.0% | |
| GACTTAGTTGTTCTATCAGG+TGG | - | chr5_1:50161200-50161219 | Msa0735130:intron | 40.0% | |
| ! | TGCATAATTGGTGTCTATGC+TGG | + | chr5_1:50161282-50161301 | None:intergenic | 40.0% |
| !! | TTGCAAATGGGCTGCATAAT+TGG | + | chr5_1:50161294-50161313 | None:intergenic | 40.0% |
| TTATGCAGCCCATTTGCAAA+AGG | - | chr5_1:50161295-50161314 | Msa0735130:intron | 40.0% | |
| ! | CAAGAGCTTTTCAAAGGTGA+TGG | - | chr5_1:50161434-50161453 | Msa0735130:CDS | 40.0% |
| GGTAACATAAAGCCACTTAC+TGG | - | chr5_1:50161542-50161561 | Msa0735130:CDS | 40.0% | |
| AAGCCACTTACTGGGAAAAA+TGG | - | chr5_1:50161551-50161570 | Msa0735130:CDS | 40.0% | |
| !! | TCACCATTTTTCCCAGTAAG+TGG | + | chr5_1:50161557-50161576 | None:intergenic | 40.0% |
| ATTAGGAGTGAGCTTTGCAA+TGG | + | chr5_1:50159918-50159937 | None:intergenic | 40.0% | |
| TCTTCTCACCAATGAAGGTA+GGG | + | chr5_1:50160620-50160639 | None:intergenic | 40.0% | |
| ! | TTTACAAGCTTTGTCGACAG+CGG | + | chr5_1:50160700-50160719 | None:intergenic | 40.0% |
| CAACTTGCGATTACAATTGG+AGG | + | chr5_1:50160984-50161003 | None:intergenic | 40.0% | |
| TGCATCAATTAACAGTTGGG+CGG | - | chr5_1:50161032-50161051 | Msa0735130:intron | 40.0% | |
| GACTTAGTTGTTCTATCAGG+TGG | - | chr5_1:50161200-50161219 | Msa0735130:intron | 40.0% | |
| ! | TGCATAATTGGTGTCTATGC+TGG | + | chr5_1:50161282-50161301 | None:intergenic | 40.0% |
| !! | TTGCAAATGGGCTGCATAAT+TGG | + | chr5_1:50161294-50161313 | None:intergenic | 40.0% |
| TTATGCAGCCCATTTGCAAA+AGG | - | chr5_1:50161295-50161314 | Msa0735130:intron | 40.0% | |
| ! | CAAGAGCTTTTCAAAGGTGA+TGG | - | chr5_1:50161434-50161453 | Msa0735130:CDS | 40.0% |
| GGTAACATAAAGCCACTTAC+TGG | - | chr5_1:50161542-50161561 | Msa0735130:CDS | 40.0% | |
| AAGCCACTTACTGGGAAAAA+TGG | - | chr5_1:50161551-50161570 | Msa0735130:CDS | 40.0% | |
| !! | TCACCATTTTTCCCAGTAAG+TGG | + | chr5_1:50161557-50161576 | None:intergenic | 40.0% |
| AATTATTCGTGAGCCACGCA+TGG | - | chr5_1:50159997-50160016 | Msa0735130:CDS | 45.0% | |
| ATTATTCGTGAGCCACGCAT+GGG | - | chr5_1:50159998-50160017 | Msa0735130:CDS | 45.0% | |
| ! | AGGGCAAGAGGTGCAAAAAT+CGG | + | chr5_1:50160339-50160358 | None:intergenic | 45.0% |
| AATCCACTTGTAAGGGCAAG+AGG | + | chr5_1:50160351-50160370 | None:intergenic | 45.0% | |
| GTGAAACTACAGGGTTGTGA+TGG | - | chr5_1:50160573-50160592 | Msa0735130:intron | 45.0% | |
| CTTCTCACCAATGAAGGTAG+GGG | + | chr5_1:50160619-50160638 | None:intergenic | 45.0% | |
| GTCTTCTCACCAATGAAGGT+AGG | + | chr5_1:50160621-50160640 | None:intergenic | 45.0% | |
| TGCAGTCTTCTCACCAATGA+AGG | + | chr5_1:50160625-50160644 | None:intergenic | 45.0% | |
| GCATCAATTAACAGTTGGGC+GGG | - | chr5_1:50161033-50161052 | Msa0735130:intron | 45.0% | |
| CTCTTCTGCCTAGTAACACT+TGG | + | chr5_1:50161073-50161092 | None:intergenic | 45.0% | |
| CTATCAGGTGGTCACACAAT+TGG | - | chr5_1:50161212-50161231 | Msa0735130:intron | 45.0% | |
| ! | AGGGCATGCCTTTTGCAAAT+GGG | + | chr5_1:50161306-50161325 | None:intergenic | 45.0% |
| CTGGGAAAAATGGTGAGATC+AGG | - | chr5_1:50161561-50161580 | Msa0735130:CDS | 45.0% | |
| AATTATTCGTGAGCCACGCA+TGG | - | chr5_1:50159997-50160016 | Msa0735130:CDS | 45.0% | |
| ATTATTCGTGAGCCACGCAT+GGG | - | chr5_1:50159998-50160017 | Msa0735130:CDS | 45.0% | |
| ! | AGGGCAAGAGGTGCAAAAAT+CGG | + | chr5_1:50160339-50160358 | None:intergenic | 45.0% |
| AATCCACTTGTAAGGGCAAG+AGG | + | chr5_1:50160351-50160370 | None:intergenic | 45.0% | |
| GTGAAACTACAGGGTTGTGA+TGG | - | chr5_1:50160573-50160592 | Msa0735130:intron | 45.0% | |
| CTTCTCACCAATGAAGGTAG+GGG | + | chr5_1:50160619-50160638 | None:intergenic | 45.0% | |
| GTCTTCTCACCAATGAAGGT+AGG | + | chr5_1:50160621-50160640 | None:intergenic | 45.0% | |
| TGCAGTCTTCTCACCAATGA+AGG | + | chr5_1:50160625-50160644 | None:intergenic | 45.0% | |
| GCATCAATTAACAGTTGGGC+GGG | - | chr5_1:50161033-50161052 | Msa0735130:intron | 45.0% | |
| CTCTTCTGCCTAGTAACACT+TGG | + | chr5_1:50161073-50161092 | None:intergenic | 45.0% | |
| CTATCAGGTGGTCACACAAT+TGG | - | chr5_1:50161212-50161231 | Msa0735130:intron | 45.0% | |
| ! | AGGGCATGCCTTTTGCAAAT+GGG | + | chr5_1:50161306-50161325 | None:intergenic | 45.0% |
| CTGGGAAAAATGGTGAGATC+AGG | - | chr5_1:50161561-50161580 | Msa0735130:CDS | 45.0% | |
| GGAGTGAGCTTTGCAATGGT+AGG | + | chr5_1:50159914-50159933 | None:intergenic | 50.0% | |
| GATGAGCTAAGGAACGTCGA+AGG | + | chr5_1:50160195-50160214 | None:intergenic | 50.0% | |
| GATGACACCCCTACCTTCAT+TGG | - | chr5_1:50160609-50160628 | Msa0735130:intron | 50.0% | |
| AGTTGGGCGGGCACAAATAT+TGG | - | chr5_1:50161045-50161064 | Msa0735130:intron | 50.0% | |
| !! | GAGGGCATGCCTTTTGCAAA+TGG | + | chr5_1:50161307-50161326 | None:intergenic | 50.0% |
| ! | CAAAAGGCATGCCCTCGAAT+TGG | - | chr5_1:50161311-50161330 | Msa0735130:intron | 50.0% |
| GTGAGATCAGGTGCAATTGC+AGG | - | chr5_1:50161573-50161592 | Msa0735130:CDS | 50.0% | |
| GGAGTGAGCTTTGCAATGGT+AGG | + | chr5_1:50159914-50159933 | None:intergenic | 50.0% | |
| GATGAGCTAAGGAACGTCGA+AGG | + | chr5_1:50160195-50160214 | None:intergenic | 50.0% | |
| GATGACACCCCTACCTTCAT+TGG | - | chr5_1:50160609-50160628 | Msa0735130:intron | 50.0% | |
| AGTTGGGCGGGCACAAATAT+TGG | - | chr5_1:50161045-50161064 | Msa0735130:intron | 50.0% | |
| !! | GAGGGCATGCCTTTTGCAAA+TGG | + | chr5_1:50161307-50161326 | None:intergenic | 50.0% |
| ! | CAAAAGGCATGCCCTCGAAT+TGG | - | chr5_1:50161311-50161330 | Msa0735130:intron | 50.0% |
| GTGAGATCAGGTGCAATTGC+AGG | - | chr5_1:50161573-50161592 | Msa0735130:CDS | 50.0% | |
| GCACCTCTTGCCCTTACAAG+TGG | - | chr5_1:50160345-50160364 | Msa0735130:CDS | 55.0% | |
| AAGGCATGCCCTCGAATTGG+CGG | - | chr5_1:50161314-50161333 | Msa0735130:intron | 55.0% | |
| TGTCATCGCCGCCAATTCGA+GGG | + | chr5_1:50161325-50161344 | None:intergenic | 55.0% | |
| TTGTCATCGCCGCCAATTCG+AGG | + | chr5_1:50161326-50161345 | None:intergenic | 55.0% | |
| GCACCTCTTGCCCTTACAAG+TGG | - | chr5_1:50160345-50160364 | Msa0735130:CDS | 55.0% | |
| AAGGCATGCCCTCGAATTGG+CGG | - | chr5_1:50161314-50161333 | Msa0735130:intron | 55.0% | |
| TGTCATCGCCGCCAATTCGA+GGG | + | chr5_1:50161325-50161344 | None:intergenic | 55.0% | |
| TTGTCATCGCCGCCAATTCG+AGG | + | chr5_1:50161326-50161345 | None:intergenic | 55.0% | |
| AGCAACGATGCTCCCATGCG+TGG | + | chr5_1:50160013-50160032 | None:intergenic | 60.0% | |
| AGCAACGATGCTCCCATGCG+TGG | + | chr5_1:50160013-50160032 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 50159884 | 50161613 | 50159884 | ID=Msa0735130;Name=Msa0735130 |
| chr5_1 | mRNA | 50159884 | 50161613 | 50159884 | ID=Msa0735130-mRNA-1;Parent=Msa0735130;Name=Msa0735130-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|1|1|3|0|313 |
| chr5_1 | exon | 50161434 | 50161613 | 50161434 | ID=Msa0735130-mRNA-1:exon:14175;Parent=Msa0735130-mRNA-1 |
| chr5_1 | exon | 50160718 | 50160912 | 50160718 | ID=Msa0735130-mRNA-1:exon:14174;Parent=Msa0735130-mRNA-1 |
| chr5_1 | exon | 50159884 | 50160450 | 50159884 | ID=Msa0735130-mRNA-1:exon:14173;Parent=Msa0735130-mRNA-1 |
| chr5_1 | CDS | 50161434 | 50161613 | 50161434 | ID=Msa0735130-mRNA-1:cds;Parent=Msa0735130-mRNA-1 |
| chr5_1 | CDS | 50160718 | 50160912 | 50160718 | ID=Msa0735130-mRNA-1:cds;Parent=Msa0735130-mRNA-1 |
| chr5_1 | CDS | 50159884 | 50160450 | 50159884 | ID=Msa0735130-mRNA-1:cds;Parent=Msa0735130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
