Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639400 | XP_013455974.2 | 99.240 | 526 | 4 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1071 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639400 | sp|O82811|NRT21_ARATH | 78.828 | 529 | 109 | 1 | 1 | 526 | 1 | 529 | 0.0 | 882 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639400 | G7IRD1 | 99.240 | 526 | 4 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1071 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0639400 | 0.804318 | 2.288349e-49 | -8.615850e-47 |
| Msa0011040 | Msa0639400 | 0.800638 | 1.312327e-48 | -8.615850e-47 |
| Msa0014590 | Msa0639400 | 0.811206 | 7.861882e-51 | -8.615850e-47 |
| Msa0016830 | Msa0639400 | -0.801735 | 7.824157e-49 | -8.615850e-47 |
| Msa0019570 | Msa0639400 | 0.802238 | 6.167711e-49 | -8.615850e-47 |
| Msa0021570 | Msa0639400 | -0.800866 | 1.178691e-48 | -8.615850e-47 |
| Msa0027860 | Msa0639400 | 0.810360 | 1.198365e-50 | -8.615850e-47 |
| Msa0028410 | Msa0639400 | -0.818226 | 2.189579e-52 | -8.615850e-47 |
| Msa0028450 | Msa0639400 | -0.816802 | 4.584230e-52 | -8.615850e-47 |
| Msa0028940 | Msa0639400 | -0.801485 | 8.807269e-49 | -8.615850e-47 |
| Msa0059880 | Msa0639400 | 0.807854 | 4.124909e-50 | -8.615850e-47 |
| Msa0065190 | Msa0639400 | -0.810495 | 1.120234e-50 | -8.615850e-47 |
| Msa0067820 | Msa0639400 | -0.807939 | 3.955560e-50 | -8.615850e-47 |
| Msa0081300 | Msa0639400 | -0.802035 | 6.791641e-49 | -8.615850e-47 |
| Msa0092750 | Msa0639400 | -0.800846 | 1.189871e-48 | -8.615850e-47 |
| Msa0093530 | Msa0639400 | 0.829390 | 5.288407e-55 | -8.615850e-47 |
| Msa0095910 | Msa0639400 | 0.818023 | 2.432736e-52 | -8.615850e-47 |
| Msa0097490 | Msa0639400 | -0.811899 | 5.556454e-51 | -8.615850e-47 |
| Msa0102290 | Msa0639400 | -0.801591 | 8.375928e-49 | -8.615850e-47 |
| Msa0107830 | Msa0639400 | 0.818751 | 1.664785e-52 | -8.615850e-47 |
| Msa0117650 | Msa0639400 | 0.806884 | 6.623332e-50 | -8.615850e-47 |
| Msa0604280 | Msa0639400 | 0.819834 | 9.431640e-53 | -8.615850e-47 |
| Msa0624260 | Msa0639400 | -0.813388 | 2.625419e-51 | -8.615850e-47 |
| Msa0624360 | Msa0639400 | -0.815374 | 9.551608e-52 | -8.615850e-47 |
| Msa0628200 | Msa0639400 | 0.827566 | 1.457589e-54 | -8.615850e-47 |
| Msa0629040 | Msa0639400 | 0.810709 | 1.007326e-50 | -8.615850e-47 |
| Msa0633070 | Msa0639400 | 0.812423 | 4.272092e-51 | -8.615850e-47 |
| Msa0633940 | Msa0639400 | 0.807479 | 4.954285e-50 | -8.615850e-47 |
| Msa0633970 | Msa0639400 | 0.802658 | 5.054744e-49 | -8.615850e-47 |
| Msa0634290 | Msa0639400 | 0.827059 | 1.927673e-54 | -8.615850e-47 |
| Msa0637700 | Msa0639400 | 0.802192 | 6.305510e-49 | -8.615850e-47 |
| Msa0639400 | Msa0639410 | 0.931089 | 6.320864e-94 | -8.615850e-47 |
| Msa0639400 | Msa0640290 | 0.810330 | 1.216177e-50 | -8.615850e-47 |
| Msa0639400 | Msa0657260 | 0.804808 | 1.808205e-49 | -8.615850e-47 |
| Msa0639400 | Msa0668220 | 0.841854 | 3.692026e-58 | -8.615850e-47 |
| Msa0639400 | Msa0668230 | 0.807182 | 5.726727e-50 | -8.615850e-47 |
| Msa0639400 | Msa0670360 | 0.802074 | 6.665904e-49 | -8.615850e-47 |
| Msa0639400 | Msa0677110 | -0.800886 | 1.167844e-48 | -8.615850e-47 |
| Msa0639400 | Msa0679270 | -0.805820 | 1.109652e-49 | -8.615850e-47 |
| Msa0639400 | Msa0682410 | 0.916360 | 1.955593e-85 | -8.615850e-47 |
| Msa0639400 | Msa0682420 | 0.940635 | 1.663796e-100 | -8.615850e-47 |
| Msa0639400 | Msa0715210 | 0.810494 | 1.120883e-50 | -8.615850e-47 |
| Msa0639400 | Msa0718770 | 0.811009 | 8.671733e-51 | -8.615850e-47 |
| Msa0639400 | Msa0721260 | 0.807326 | 5.339648e-50 | -8.615850e-47 |
| Msa0639400 | Msa0728520 | 0.834817 | 2.406154e-56 | -8.615850e-47 |
| Msa0639400 | Msa0741360 | 0.801722 | 7.875539e-49 | -8.615850e-47 |
| Msa0639400 | Msa0752830 | -0.805251 | 1.461008e-49 | -8.615850e-47 |
| Msa0639400 | Msa0753410 | 0.803067 | 4.160902e-49 | -8.615850e-47 |
| Msa0639400 | Msa0754530 | 0.822150 | 2.763469e-53 | -8.615850e-47 |
| Msa0639400 | Msa0757120 | 0.831579 | 1.540900e-55 | -8.615850e-47 |
| Msa0639400 | Msa0759610 | 0.812973 | 3.237246e-51 | -8.615850e-47 |
| Msa0639400 | Msa0776540 | 0.837820 | 4.147316e-57 | -8.615850e-47 |
| Msa0639400 | Msa0777070 | 0.806966 | 6.361623e-50 | -8.615850e-47 |
| Msa0639400 | Msa0777600 | 0.813708 | 2.232593e-51 | -8.615850e-47 |
| Msa0639400 | Msa0787860 | 0.821931 | 3.105410e-53 | -8.615850e-47 |
| Msa0639400 | Msa0792330 | 0.805787 | 1.127454e-49 | -8.615850e-47 |
| Msa0639400 | Msa0792410 | 0.810590 | 1.068865e-50 | -8.615850e-47 |
| Msa0639400 | Msa0795320 | 0.816863 | 4.440743e-52 | -8.615850e-47 |
| Msa0639400 | Msa0795330 | 0.808602 | 2.857790e-50 | -8.615850e-47 |
| Msa0639400 | Msa0798150 | 0.818929 | 1.516785e-52 | -8.615850e-47 |
| Msa0639400 | Msa0802600 | 0.827168 | 1.815799e-54 | -8.615850e-47 |
| Msa0639400 | Msa0814160 | 0.809313 | 2.012833e-50 | -8.615850e-47 |
| Msa0639400 | Msa0816140 | 0.821294 | 4.358524e-53 | -8.615850e-47 |
| Msa0639400 | Msa0824850 | 0.816971 | 4.200538e-52 | -8.615850e-47 |
| Msa0639400 | Msa0824860 | 0.817032 | 4.068528e-52 | -8.615850e-47 |
| Msa0639400 | Msa0827800 | 0.830506 | 2.826748e-55 | -8.615850e-47 |
| Msa0639400 | Msa0833230 | 0.823784 | 1.149529e-53 | -8.615850e-47 |
| Msa0639400 | Msa0839530 | 0.801973 | 6.992467e-49 | -8.615850e-47 |
| Msa0639400 | Msa0840450 | -0.802278 | 6.051434e-49 | -8.615850e-47 |
| Msa0639400 | Msa0854840 | 0.807182 | 5.726819e-50 | -8.615850e-47 |
| Msa0639400 | Msa0855260 | 0.808427 | 3.114439e-50 | -8.615850e-47 |
| Msa0639400 | Msa0863840 | 0.822431 | 2.377114e-53 | -8.615850e-47 |
| Msa0639400 | Msa0863850 | 0.813842 | 2.085623e-51 | -8.615850e-47 |
| Msa0639400 | Msa0863860 | 0.808403 | 3.150178e-50 | -8.615850e-47 |
| Msa0639400 | Msa0864160 | 0.824755 | 6.796881e-54 | -8.615850e-47 |
| Msa0639400 | Msa0868820 | 0.811997 | 5.289815e-51 | -8.615850e-47 |
| Msa0639400 | Msa0876150 | -0.807486 | 4.937623e-50 | -8.615850e-47 |
| Msa0639400 | Msa0896920 | 0.856755 | 2.596264e-62 | -8.615850e-47 |
| Msa0639400 | Msa0896950 | 0.806122 | 9.589950e-50 | -8.615850e-47 |
| Msa0639400 | Msa0927890 | -0.804369 | 2.233152e-49 | -8.615850e-47 |
| Msa0639400 | Msa0932900 | 0.835432 | 1.683970e-56 | -8.615850e-47 |
| Msa0639400 | Msa0932910 | 0.809958 | 1.462469e-50 | -8.615850e-47 |
| Msa0639400 | Msa0932930 | 0.827527 | 1.489627e-54 | -8.615850e-47 |
| Msa0639400 | Msa0933590 | 0.813357 | 2.666181e-51 | -8.615850e-47 |
| Msa0639400 | Msa0933610 | 0.815260 | 1.012782e-51 | -8.615850e-47 |
| Msa0639400 | Msa0964510 | 0.809954 | 1.465391e-50 | -8.615850e-47 |
| Msa0639400 | Msa0970790 | 0.808988 | 2.362414e-50 | -8.615850e-47 |
| Msa0639400 | Msa0970820 | 0.821064 | 4.924970e-53 | -8.615850e-47 |
| Msa0639400 | Msa0976400 | 0.801641 | 8.181378e-49 | -8.615850e-47 |
| Msa0639400 | Msa0996980 | 0.830993 | 2.146815e-55 | -8.615850e-47 |
| Msa0639400 | Msa1006030 | 0.832492 | 9.166116e-56 | -8.615850e-47 |
| Msa0639400 | Msa1006170 | 0.836384 | 9.659068e-57 | -8.615850e-47 |
| Msa0639400 | Msa1007930 | 0.802248 | 6.138569e-49 | -8.615850e-47 |
| Msa0639400 | Msa1014530 | -0.817193 | 3.743316e-52 | -8.615850e-47 |
| Msa0639400 | Msa1018590 | 0.803390 | 3.567161e-49 | -8.615850e-47 |
| Msa0639400 | Msa1024350 | 0.812054 | 5.142908e-51 | -8.615850e-47 |
| Msa0639400 | Msa1035050 | 0.818320 | 2.084334e-52 | -8.615850e-47 |
| Msa0639400 | Msa1035090 | -0.801124 | 1.044014e-48 | -8.615850e-47 |
| Msa0639400 | Msa1037360 | 0.822055 | 2.907313e-53 | -8.615850e-47 |
| Msa0639400 | Msa1040030 | -0.811165 | 8.025105e-51 | -8.615850e-47 |
| Msa0639400 | Msa1048350 | 0.841593 | 4.325793e-58 | -8.615850e-47 |
| Msa0639400 | Msa1048390 | 0.817460 | 3.260180e-52 | -8.615850e-47 |
| Msa0639400 | Msa1055490 | -0.818751 | 1.664155e-52 | -8.615850e-47 |
| Msa0639400 | Msa1061670 | 0.831926 | 1.265016e-55 | -8.615850e-47 |
| Msa0639400 | Msa1061840 | 0.813002 | 3.191121e-51 | -8.615850e-47 |
| Msa0639400 | Msa1064940 | 0.853600 | 2.147476e-61 | -8.615850e-47 |
| Msa0639400 | Msa1075090 | 0.808584 | 2.883272e-50 | -8.615850e-47 |
| Msa0639400 | Msa1076070 | -0.802656 | 5.059027e-49 | -8.615850e-47 |
| Msa0639400 | Msa1087370 | 0.805198 | 1.498751e-49 | -8.615850e-47 |
| Msa0639400 | Msa1087380 | 0.823831 | 1.120876e-53 | -8.615850e-47 |
| Msa0639400 | Msa1099640 | 0.807705 | 4.437070e-50 | -8.615850e-47 |
| Msa0639400 | Msa1100030 | 0.830794 | 2.403151e-55 | -8.615850e-47 |
| Msa0639400 | Msa1100330 | 0.817623 | 2.995432e-52 | -8.615850e-47 |
| Msa0639400 | Msa1103450 | 0.804479 | 2.118567e-49 | -8.615850e-47 |
| Msa0639400 | Msa1104960 | 0.808175 | 3.523337e-50 | -8.615850e-47 |
| Msa0639400 | Msa1106680 | 0.814955 | 1.183610e-51 | -8.615850e-47 |
| Msa0639400 | Msa1106960 | 0.819918 | 9.024090e-53 | -8.615850e-47 |
| Msa0639400 | Msa1110040 | 0.807299 | 5.408885e-50 | -8.615850e-47 |
| Msa0639400 | Msa1123000 | 0.823929 | 1.062965e-53 | -8.615850e-47 |
| Msa0639400 | Msa1127940 | 0.805868 | 1.084224e-49 | -8.615850e-47 |
| Msa0639400 | Msa1138110 | 0.810247 | 1.267656e-50 | -8.615850e-47 |
| Msa0639400 | Msa1147030 | 0.815464 | 9.122575e-52 | -8.615850e-47 |
| Msa0639400 | Msa1150130 | -0.807611 | 4.644707e-50 | -8.615850e-47 |
| Msa0639400 | Msa1153690 | 0.803553 | 3.300367e-49 | -8.615850e-47 |
| Msa0639400 | Msa1161550 | -0.801685 | 8.011670e-49 | -8.615850e-47 |
| Msa0639400 | Msa1165860 | 0.806030 | 1.002449e-49 | -8.615850e-47 |
| Msa0639400 | Msa1167960 | 0.800213 | 1.601441e-48 | -8.615850e-47 |
| Msa0639400 | Msa1169630 | -0.813380 | 2.635165e-51 | -8.615850e-47 |
| Msa0639400 | Msa1170340 | 0.803193 | 3.918559e-49 | -8.615850e-47 |
| Msa0639400 | Msa1173410 | -0.800621 | 1.322473e-48 | -8.615850e-47 |
| Msa0639400 | Msa1177090 | 0.800109 | 1.681841e-48 | -8.615850e-47 |
| Msa0639400 | Msa1177300 | -0.808859 | 2.518268e-50 | -8.615850e-47 |
| Msa0639400 | Msa1182950 | -0.803044 | 4.206172e-49 | -8.615850e-47 |
| Msa0639400 | Msa1190300 | -0.801778 | 7.669535e-49 | -8.615850e-47 |
| Msa0639400 | Msa1193680 | -0.804170 | 2.456395e-49 | -8.615850e-47 |
| Msa0639400 | Msa1198420 | -0.808953 | 2.404005e-50 | -8.615850e-47 |
| Msa0639400 | Msa1203320 | -0.814526 | 1.473107e-51 | -8.615850e-47 |
| Msa0639400 | Msa1206330 | 0.835045 | 2.108806e-56 | -8.615850e-47 |
| Msa0639400 | Msa1206380 | 0.834500 | 2.891995e-56 | -8.615850e-47 |
| Msa0639400 | Msa1208830 | 0.808798 | 2.595119e-50 | -8.615850e-47 |
| Msa0639400 | Msa1208910 | 0.814732 | 1.326429e-51 | -8.615850e-47 |
| Msa0639400 | Msa1212070 | -0.800445 | 1.436811e-48 | -8.615850e-47 |
| Msa0639400 | Msa1224310 | -0.805019 | 1.633852e-49 | -8.615850e-47 |
| Msa0639400 | Msa1239050 | 0.808214 | 3.456302e-50 | -8.615850e-47 |
| Msa0639400 | Msa1239190 | 0.803373 | 3.595363e-49 | -8.615850e-47 |
| Msa0639400 | Msa1254870 | 0.800165 | 1.638190e-48 | -8.615850e-47 |
| Msa0639400 | Msa1292700 | -0.823924 | 1.065643e-53 | -8.615850e-47 |
| Msa0639400 | Msa1316960 | 0.805837 | 1.100973e-49 | -8.615850e-47 |
| Msa0639400 | Msa1317090 | -0.811407 | 7.109662e-51 | -8.615850e-47 |
| Msa0639400 | Msa1319760 | 0.813551 | 2.417186e-51 | -8.615850e-47 |
| Msa0639400 | Msa1328430 | 0.801803 | 7.576940e-49 | -8.615850e-47 |
| Msa0639400 | Msa1341030 | 0.802157 | 6.410107e-49 | -8.615850e-47 |
| Msa0639400 | Msa1350870 | 0.824996 | 5.961136e-54 | -8.615850e-47 |
| Msa0639400 | Msa1355330 | 0.813935 | 1.989939e-51 | -8.615850e-47 |
| Msa0639400 | Msa1355340 | 0.830293 | 3.186981e-55 | -8.615850e-47 |
| Msa0639400 | Msa1357840 | 0.815565 | 8.660348e-52 | -8.615850e-47 |
| Msa0639400 | Msa1364690 | 0.808580 | 2.888953e-50 | -8.615850e-47 |
| Msa0639400 | Msa1374610 | -0.801186 | 1.014117e-48 | -8.615850e-47 |
| Msa0639400 | Msa1398110 | 0.807643 | 4.573039e-50 | -8.615850e-47 |
| Msa0639400 | Msa1398120 | 0.806662 | 7.378100e-50 | -8.615850e-47 |
| Msa0639400 | Msa1411550 | 0.837401 | 5.312115e-57 | -8.615850e-47 |
| Msa0639400 | Msa1412360 | 0.823410 | 1.406365e-53 | -8.615850e-47 |
| Msa0639400 | Msa1412750 | -0.808888 | 2.482005e-50 | -8.615850e-47 |
| Msa0639400 | Msa1418010 | -0.802191 | 6.307495e-49 | -8.615850e-47 |
| Msa0639400 | Msa1419210 | 0.813784 | 2.147665e-51 | -8.615850e-47 |
| Msa0639400 | Msa1419930 | -0.803730 | 3.031509e-49 | -8.615850e-47 |
| Msa0639400 | Msa1438780 | -0.801624 | 8.248092e-49 | -8.615850e-47 |
| Msa0639400 | Msa1441300 | 0.804738 | 1.870247e-49 | -8.615850e-47 |
| Msa0639400 | Msa1446090 | 0.808536 | 2.951667e-50 | -8.615850e-47 |
| Msa0639400 | Msa1456600 | 0.817841 | 2.675082e-52 | -8.615850e-47 |
| Msa0639400 | Msa1459610 | 0.803183 | 3.937632e-49 | -8.615850e-47 |
| Msa0639400 | Msa1462610 | 0.811997 | 5.291335e-51 | -8.615850e-47 |
| Msa0639400 | Msa1465380 | -0.806627 | 7.502667e-50 | -8.615850e-47 |
| Msa0124070 | Msa0639400 | -0.826835 | 2.180925e-54 | -8.615850e-47 |
| Msa0126960 | Msa0639400 | 0.829775 | 4.263439e-55 | -8.615850e-47 |
| Msa0127110 | Msa0639400 | -0.804414 | 2.184869e-49 | -8.615850e-47 |
| Msa0129850 | Msa0639400 | 0.803011 | 4.272833e-49 | -8.615850e-47 |
| Msa0141090 | Msa0639400 | -0.808038 | 3.768615e-50 | -8.615850e-47 |
| Msa0147070 | Msa0639400 | -0.803245 | 3.821423e-49 | -8.615850e-47 |
| Msa0171740 | Msa0639400 | 0.801649 | 8.150105e-49 | -8.615850e-47 |
| Msa0177550 | Msa0639400 | 0.803954 | 2.724528e-49 | -8.615850e-47 |
| Msa0179830 | Msa0639400 | 0.802676 | 5.011001e-49 | -8.615850e-47 |
| Msa0190670 | Msa0639400 | 0.802983 | 4.330225e-49 | -8.615850e-47 |
| Msa0197600 | Msa0639400 | -0.805227 | 1.477898e-49 | -8.615850e-47 |
| Msa0199860 | Msa0639400 | 0.803483 | 3.412307e-49 | -8.615850e-47 |
| Msa0207640 | Msa0639400 | 0.812619 | 3.871001e-51 | -8.615850e-47 |
| Msa0207930 | Msa0639400 | 0.811560 | 6.586319e-51 | -8.615850e-47 |
| Msa0207970 | Msa0639400 | 0.807837 | 4.158101e-50 | -8.615850e-47 |
| Msa0227290 | Msa0639400 | -0.804711 | 1.894382e-49 | -8.615850e-47 |
| Msa0231180 | Msa0639400 | -0.802656 | 5.059027e-49 | -8.615850e-47 |
| Msa0232160 | Msa0639400 | -0.804799 | 1.816372e-49 | -8.615850e-47 |
| Msa0364910 | Msa0639400 | -0.801781 | 7.657443e-49 | -8.615850e-47 |
| Msa0366510 | Msa0639400 | 0.806546 | 7.806853e-50 | -8.615850e-47 |
| Msa0371050 | Msa0639400 | -0.811410 | 7.100152e-51 | -8.615850e-47 |
| Msa0374840 | Msa0639400 | -0.806647 | 7.430409e-50 | -8.615850e-47 |
| Msa0375100 | Msa0639400 | -0.803890 | 2.808970e-49 | -8.615850e-47 |
| Msa0390200 | Msa0639400 | 0.814668 | 1.370393e-51 | -8.615850e-47 |
| Msa0396700 | Msa0639400 | 0.803998 | 2.667685e-49 | -8.615850e-47 |
| Msa0404880 | Msa0639400 | -0.802219 | 6.222606e-49 | -8.615850e-47 |
| Msa0409490 | Msa0639400 | 0.802066 | 6.692867e-49 | -8.615850e-47 |
| Msa0414480 | Msa0639400 | 0.813990 | 1.934916e-51 | -8.615850e-47 |
| Msa0418150 | Msa0639400 | 0.827490 | 1.519953e-54 | -8.615850e-47 |
| Msa0418160 | Msa0639400 | 0.827320 | 1.669540e-54 | -8.615850e-47 |
| Msa0443250 | Msa0639400 | -0.806939 | 6.446901e-50 | -8.615850e-47 |
| Msa0454770 | Msa0639400 | 0.825702 | 4.057750e-54 | -8.615850e-47 |
| Msa0463140 | Msa0639400 | -0.809355 | 1.971626e-50 | -8.615850e-47 |
| Msa0464300 | Msa0639400 | 0.827325 | 1.664943e-54 | -8.615850e-47 |
| Msa0464310 | Msa0639400 | 0.832825 | 7.577964e-56 | -8.615850e-47 |
| Msa0469770 | Msa0639400 | -0.803560 | 3.288274e-49 | -8.615850e-47 |
| Msa0469840 | Msa0639400 | -0.811587 | 6.496521e-51 | -8.615850e-47 |
| Msa0240290 | Msa0639400 | -0.805093 | 1.576608e-49 | -8.615850e-47 |
| Msa0242830 | Msa0639400 | 0.807236 | 5.577428e-50 | -8.615850e-47 |
| Msa0245660 | Msa0639400 | 0.814606 | 1.413902e-51 | -8.615850e-47 |
| Msa0266640 | Msa0639400 | 0.805530 | 1.277060e-49 | -8.615850e-47 |
| Msa0266650 | Msa0639400 | 0.801144 | 1.034175e-48 | -8.615850e-47 |
| Msa0269710 | Msa0639400 | 0.812948 | 3.279540e-51 | -8.615850e-47 |
| Msa0271700 | Msa0639400 | 0.809943 | 1.473679e-50 | -8.615850e-47 |
| Msa0271720 | Msa0639400 | 0.803994 | 2.672307e-49 | -8.615850e-47 |
| Msa0272210 | Msa0639400 | 0.804423 | 2.175360e-49 | -8.615850e-47 |
| Msa0274250 | Msa0639400 | 0.818478 | 1.919493e-52 | -8.615850e-47 |
| Msa0274260 | Msa0639400 | 0.847903 | 8.611155e-60 | -8.615850e-47 |
| Msa0278080 | Msa0639400 | -0.814743 | 1.319052e-51 | -8.615850e-47 |
| Msa0278950 | Msa0639400 | 0.805274 | 1.444573e-49 | -8.615850e-47 |
| Msa0287630 | Msa0639400 | 0.813233 | 2.839508e-51 | -8.615850e-47 |
| Msa0296100 | Msa0639400 | -0.802780 | 4.768099e-49 | -8.615850e-47 |
| Msa0307630 | Msa0639400 | 0.808924 | 2.438443e-50 | -8.615850e-47 |
| Msa0307750 | Msa0639400 | -0.801526 | 8.637506e-49 | -8.615850e-47 |
| Msa0310270 | Msa0639400 | -0.800103 | 1.686039e-48 | -8.615850e-47 |
| Msa0316080 | Msa0639400 | -0.806038 | 9.985169e-50 | -8.615850e-47 |
| Msa0316230 | Msa0639400 | 0.830148 | 3.457774e-55 | -8.615850e-47 |
| Msa0318370 | Msa0639400 | 0.810823 | 9.516931e-51 | -8.615850e-47 |
| Msa0322460 | Msa0639400 | 0.821072 | 4.903526e-53 | -8.615850e-47 |
| Msa0338900 | Msa0639400 | -0.806151 | 9.453644e-50 | -8.615850e-47 |
| Msa0346170 | Msa0639400 | 0.806124 | 9.580759e-50 | -8.615850e-47 |
| Msa0356320 | Msa0639400 | 0.806623 | 7.518611e-50 | -8.615850e-47 |
| Msa0489370 | Msa0639400 | 0.828274 | 9.845527e-55 | -8.615850e-47 |
| Msa0490740 | Msa0639400 | -0.801011 | 1.101202e-48 | -8.615850e-47 |
| Msa0491800 | Msa0639400 | 0.803372 | 3.597974e-49 | -8.615850e-47 |
| Msa0510870 | Msa0639400 | 0.809194 | 2.134158e-50 | -8.615850e-47 |
| Msa0515400 | Msa0639400 | -0.803361 | 3.616646e-49 | -8.615850e-47 |
| Msa0515420 | Msa0639400 | -0.815145 | 1.073800e-51 | -8.615850e-47 |
| Msa0517820 | Msa0639400 | -0.800628 | 1.318324e-48 | -8.615850e-47 |
| Msa0529420 | Msa0639400 | 0.815530 | 8.816682e-52 | -8.615850e-47 |
| Msa0533510 | Msa0639400 | 0.811518 | 6.725204e-51 | -8.615850e-47 |
| Msa0533520 | Msa0639400 | 0.804636 | 1.964135e-49 | -8.615850e-47 |
| Msa0535570 | Msa0639400 | 0.818280 | 2.128038e-52 | -8.615850e-47 |
| Msa0537960 | Msa0639400 | -0.813499 | 2.481342e-51 | -8.615850e-47 |
| Msa0538440 | Msa0639400 | 0.858359 | 8.697532e-63 | -8.615850e-47 |
| Msa0538450 | Msa0639400 | 0.832451 | 9.380820e-56 | -8.615850e-47 |
| Msa0538520 | Msa0639400 | 0.831553 | 1.563679e-55 | -8.615850e-47 |
| Msa0538530 | Msa0639400 | 0.839914 | 1.191076e-57 | -8.615850e-47 |
| Msa0546750 | Msa0639400 | 0.869324 | 3.371210e-66 | -8.615850e-47 |
| Msa0546760 | Msa0639400 | 0.926294 | 5.713797e-91 | -8.615850e-47 |
| Msa0554660 | Msa0639400 | 0.845043 | 5.194138e-59 | -8.615850e-47 |
| Msa0565930 | Msa0639400 | -0.813240 | 2.828665e-51 | -8.615850e-47 |
| Msa0571220 | Msa0639400 | -0.803796 | 2.937333e-49 | -8.615850e-47 |
| Msa0583810 | Msa0639400 | -0.805000 | 1.649082e-49 | -8.615850e-47 |
| Msa0588600 | Msa0639400 | -0.802886 | 4.534580e-49 | -8.615850e-47 |
| Msa0589720 | Msa0639400 | 0.805262 | 1.453256e-49 | -8.615850e-47 |
| Msa0589730 | Msa0639400 | 0.809745 | 1.625315e-50 | -8.615850e-47 |
| Msa0589740 | Msa0639400 | 0.838795 | 2.324991e-57 | -8.615850e-47 |
| Msa0591490 | Msa0639400 | 0.814672 | 1.367321e-51 | -8.615850e-47 |
| Msa0593870 | Msa0639400 | 0.814240 | 1.704265e-51 | -8.615850e-47 |
| Msa0594320 | Msa0639400 | 0.822750 | 2.004838e-53 | -8.615850e-47 |
| Msa0594330 | Msa0639400 | 0.835540 | 1.581669e-56 | -8.615850e-47 |
| Msa0597800 | Msa0639400 | 0.831084 | 2.039547e-55 | -8.615850e-47 |
| Msa0597820 | Msa0639400 | 0.830949 | 2.201922e-55 | -8.615850e-47 |
| Msa0598610 | Msa0639400 | -0.805715 | 1.167628e-49 | -8.615850e-47 |
| Msa0601400 | Msa0639400 | 0.801088 | 1.061898e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639400 | MtrunA17_Chr4g0028551 | 99.240 | 526 | 4 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1071 |
| Msa0639400 | MtrunA17_Chr4g0028541 | 99.240 | 526 | 4 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1071 |
| Msa0639400 | MtrunA17_Chr8g0368421 | 61.554 | 489 | 186 | 2 | 38 | 524 | 18 | 506 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639400 | AT1G08090.1 | 78.828 | 529 | 109 | 1 | 1 | 526 | 1 | 529 | 0.0 | 882 |
| Msa0639400 | AT5G60770.1 | 79.017 | 529 | 105 | 2 | 1 | 526 | 1 | 526 | 0.0 | 877 |
| Msa0639400 | AT1G08100.1 | 74.855 | 517 | 127 | 2 | 7 | 521 | 6 | 521 | 0.0 | 818 |
| Msa0639400 | AT5G60780.1 | 72.983 | 533 | 136 | 3 | 2 | 526 | 6 | 538 | 0.0 | 792 |
| Msa0639400 | AT3G45060.1 | 72.285 | 534 | 135 | 4 | 5 | 526 | 9 | 541 | 0.0 | 782 |
| Msa0639400 | AT1G12940.1 | 59.259 | 486 | 194 | 2 | 38 | 522 | 20 | 502 | 0.0 | 605 |
| Msa0639400 | AT5G14570.1 | 48.723 | 470 | 219 | 4 | 41 | 493 | 18 | 482 | 3.17e-152 | 444 |
Find 138 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGTTATCATGGGTATTT+TGG | 0.143284 | 4_3:+35243302 | Msa0639400:CDS |
| GCCGGAGTCGCTTCGGTTTC+AGG | 0.162646 | 4_3:+35242907 | Msa0639400:CDS |
| TGCTGCTGGTTGGGGTAATA+TGG | 0.200878 | 4_3:+35243170 | Msa0639400:CDS |
| ATCAACTGGTAATGCAAATT+TGG | 0.211102 | 4_3:-35242710 | None:intergenic |
| CCTGCTTTATGGTTACTCTA+TGG | 0.215654 | 4_3:+35243546 | Msa0639400:CDS |
| ATGTTTAATAGTAAAATTAT+TGG | 0.221351 | 4_3:+35243132 | Msa0639400:CDS |
| AAAATTATTGGACTTGTAAA+TGG | 0.231743 | 4_3:+35243144 | Msa0639400:CDS |
| ATTCATATCAAGAAGATCTT+TGG | 0.235165 | 4_3:+35244108 | Msa0639400:CDS |
| CATTTGTTTCATGCCAATAT+TGG | 0.240129 | 4_3:+35243100 | Msa0639400:CDS |
| GGTTGCATCAACCAAGTCTT+AGG | 0.277283 | 4_3:+35244383 | Msa0639400:CDS |
| GGAATCATTGCTGCCTCCTT+TGG | 0.289222 | 4_3:+35243857 | Msa0639400:CDS |
| CAACAGCTTCAGGTCTTTCA+TGG | 0.291908 | 4_3:+35244215 | Msa0639400:CDS |
| CACTCAGCTTATTATGCCTT+TGG | 0.295935 | 4_3:+35243203 | Msa0639400:CDS |
| GTTTATGATTGGTTTCTCTT+TGG | 0.307610 | 4_3:+35243074 | Msa0639400:CDS |
| AGCTCCATGCATGGAGTAAC+TGG | 0.308320 | 4_3:+35242628 | Msa0639400:CDS |
| AGATCTTTGGGAATTATATC+AGG | 0.310342 | 4_3:+35244121 | Msa0639400:CDS |
| AAATGGTACTGCTGCTGGTT+GGG | 0.317688 | 4_3:+35243161 | Msa0639400:CDS |
| GATGTTGCAGCAAGATTATT+CGG | 0.318773 | 4_3:+35243923 | Msa0639400:CDS |
| ACATTGTACTCATCCAATAT+TGG | 0.319895 | 4_3:-35243113 | None:intergenic |
| GGAATTATATCAGGTTTAAC+TGG | 0.331122 | 4_3:+35244130 | Msa0639400:CDS |
| TGAAAAGAGTTTGAAAACTT+TGG | 0.345000 | 4_3:-35242746 | None:intergenic |
| CACCATTAGTCCCGATCATT+CGG | 0.347577 | 4_3:+35242848 | Msa0639400:CDS |
| GGTGCAATTTGTGACCTATT+AGG | 0.354243 | 4_3:+35242955 | Msa0639400:CDS |
| TCATTTGTTGAAAATGCTTC+TGG | 0.358655 | 4_3:+35243036 | Msa0639400:CDS |
| AGAAAGATATCCATGATAAA+TGG | 0.374158 | 4_3:-35242795 | None:intergenic |
| TTCCGGCTGTGTGTAGCTTT+AGG | 0.375698 | 4_3:-35243838 | None:intergenic |
| CTTCTGGTTATATAGCAGTT+AGG | 0.379548 | 4_3:+35243052 | Msa0639400:CDS |
| TGGTTGGTTGCATGTTATCA+TGG | 0.382144 | 4_3:+35243293 | Msa0639400:CDS |
| GTGCTACTCCTTTCACTGCT+TGG | 0.383160 | 4_3:+35243250 | Msa0639400:CDS |
| GGTATGCTATAACAAATTAT+AGG | 0.383668 | 4_3:+35243509 | Msa0639400:CDS |
| TTCATATCAAGAAGATCTTT+GGG | 0.385193 | 4_3:+35244109 | Msa0639400:CDS |
| TAGTGGGTAGGAGTTGTATT+TGG | 0.393817 | 4_3:-35244463 | None:intergenic |
| ACTCCATGCATGGAGCTTCC+AGG | 0.398090 | 4_3:-35242622 | None:intergenic |
| GGTTGGGGTAATATGGGTGG+TGG | 0.398747 | 4_3:+35243177 | Msa0639400:CDS |
| GCAGGTGGAAACTTTGGTTC+CGG | 0.404321 | 4_3:+35244154 | Msa0639400:CDS |
| AACCATAACGTGGACCTAAT+AGG | 0.411808 | 4_3:-35242969 | None:intergenic |
| CTGCTTTATGGTTACTCTAT+GGG | 0.414595 | 4_3:+35243547 | Msa0639400:CDS |
| GCTGCTGGTTGGGGTAATAT+GGG | 0.417787 | 4_3:+35243171 | Msa0639400:CDS |
| GCTGCATGTGGTGCAACATT+TGG | 0.420104 | 4_3:+35244076 | Msa0639400:CDS |
| CCTTGGTGCTTTGCAGAAGA+AGG | 0.426831 | 4_3:+35243359 | Msa0639400:CDS |
| AACATAGTTGCTCGTCCATT+CGG | 0.426966 | 4_3:+35243887 | Msa0639400:CDS |
| CGCGAATGTCGAGACGAAAC+AGG | 0.435192 | 4_3:-35242821 | None:intergenic |
| GTTGGGGTAATATGGGTGGT+GGG | 0.435234 | 4_3:+35243178 | Msa0639400:CDS |
| ATAGCAGTTAGGTTTATGAT+TGG | 0.436014 | 4_3:+35243063 | Msa0639400:CDS |
| TGGATGGGTGCAATGATTGT+TGG | 0.437054 | 4_3:+35244235 | Msa0639400:CDS |
| TATATCAATGGCTGATATTG+AGG | 0.442270 | 4_3:+35242594 | None:intergenic |
| AAATATCAACTGTGTTAATC+CGG | 0.442980 | 4_3:-35244173 | None:intergenic |
| AAAGATCTTCTTGATATGAA+TGG | 0.444365 | 4_3:-35244106 | None:intergenic |
| GAGGAAGACTATGGACACTA+TGG | 0.445715 | 4_3:+35243951 | Msa0639400:CDS |
| GACCTATTAGGTCCACGTTA+TGG | 0.448846 | 4_3:+35242967 | Msa0639400:CDS |
| ACTGGTGCAGGTGGAAACTT+TGG | 0.451991 | 4_3:+35244148 | Msa0639400:CDS |
| TCGGCATGAGAGGAAGACTA+TGG | 0.452862 | 4_3:+35243942 | Msa0639400:CDS |
| GGAAAATGAACAAATGCAAC+AGG | 0.456403 | 4_3:-35244268 | None:intergenic |
| TGAGAACCTTCCATTTATCA+TGG | 0.456413 | 4_3:+35242785 | Msa0639400:CDS |
| GCTGATATTGAGGGTTCACC+TGG | 0.463825 | 4_3:+35242604 | Msa0639400:CDS |
| AGCTTCAGGTCTTTCATGGA+TGG | 0.465615 | 4_3:+35244219 | Msa0639400:CDS |
| ATATCAGGTTTAACTGGTGC+AGG | 0.466260 | 4_3:+35244136 | Msa0639400:CDS |
| AGAAAACTCCTCCTAGGGTT+TGG | 0.467221 | 4_3:-35243979 | None:intergenic |
| ATATGCAGAAAACTCCTCCT+AGG | 0.470665 | 4_3:-35243985 | None:intergenic |
| AACACTATTACACTTCTGAA+TGG | 0.470788 | 4_3:+35244338 | Msa0639400:CDS |
| TGGTAACGCCGGAGTCGCTT+CGG | 0.471102 | 4_3:+35242900 | Msa0639400:CDS |
| TCCCGAATGATCGGGACTAA+TGG | 0.475992 | 4_3:-35242850 | None:intergenic |
| GGTTACCATCAGGTAAATCT+TGG | 0.480850 | 4_3:-35243338 | None:intergenic |
| CTTGTAAATGGTACTGCTGC+TGG | 0.488890 | 4_3:+35243156 | Msa0639400:CDS |
| AATGGTACTGCTGCTGGTTG+GGG | 0.493227 | 4_3:+35243162 | Msa0639400:CDS |
| AAAGGAGGCAGCAATGATTC+CGG | 0.493669 | 4_3:-35243855 | None:intergenic |
| AAACTCCTCCTAGGGTTTGG+AGG | 0.497227 | 4_3:-35243976 | None:intergenic |
| TTGCTGAGTATTTCTATGAC+AGG | 0.498846 | 4_3:+35243596 | Msa0639400:CDS |
| TAAATGGTACTGCTGCTGGT+TGG | 0.504033 | 4_3:+35243160 | Msa0639400:CDS |
| CTGTTTCGTCTCGACATTCG+CGG | 0.504824 | 4_3:+35242822 | Msa0639400:CDS |
| TCTTCCAGTTACTCCATGCA+TGG | 0.504862 | 4_3:-35242632 | None:intergenic |
| TTGGGGTAATATGGGTGGTG+GGG | 0.507796 | 4_3:+35243179 | Msa0639400:CDS |
| CCATAGAGTAACCATAAAGC+AGG | 0.508140 | 4_3:-35243546 | None:intergenic |
| TTAAGGTTGTCCCGAATGAT+CGG | 0.520419 | 4_3:-35242859 | None:intergenic |
| ACCATTAGTCCCGATCATTC+GGG | 0.520929 | 4_3:+35242849 | Msa0639400:CDS |
| CTATAACAAATTATAGGACA+TGG | 0.524591 | 4_3:+35243515 | Msa0639400:CDS |
| GTGGTATCAGTTGGAACCAT+TGG | 0.524676 | 4_3:-35242685 | None:intergenic |
| GATTTGTGTTCAGAATCAAC+TGG | 0.525048 | 4_3:-35242724 | None:intergenic |
| ATGAAGATGAAGTACAGAAA+GGG | 0.525551 | 4_3:+35244362 | Msa0639400:CDS |
| TAAGGTTGTCCCGAATGATC+GGG | 0.526814 | 4_3:-35242858 | None:intergenic |
| AATGAAGATGAAGTACAGAA+AGG | 0.527504 | 4_3:+35244361 | Msa0639400:CDS |
| CATTGCTGCCTCCTTTGGAA+TGG | 0.536934 | 4_3:+35243862 | Msa0639400:CDS |
| GATTTACCTGATGGTAACCT+TGG | 0.538623 | 4_3:+35243342 | Msa0639400:CDS |
| TCCATGATCCTCTTCTCAGT+TGG | 0.543814 | 4_3:+35244046 | Msa0639400:CDS |
| ATATCAATGGCTGATATTGA+GGG | 0.546989 | 4_3:+35242595 | None:intergenic |
| GTCATCAGTTGCTTCACCAA+TGG | 0.548350 | 4_3:+35242669 | Msa0639400:CDS |
| TTCTCAGCAAACCTAAGACT+TGG | 0.549078 | 4_3:-35244394 | None:intergenic |
| GGTTGGTTGCATGTTATCAT+GGG | 0.550695 | 4_3:+35243294 | Msa0639400:CDS |
| GCTTCAGGTCTTTCATGGAT+GGG | 0.552112 | 4_3:+35244220 | Msa0639400:CDS |
| ATGATAACATGCAACCAACC+AGG | 0.556711 | 4_3:-35243291 | None:intergenic |
| AACCTAAAGCTACACACAGC+CGG | 0.558064 | 4_3:+35243836 | Msa0639400:CDS |
| CTTGTGCTCCAACTGAGAAG+AGG | 0.561854 | 4_3:-35244054 | None:intergenic |
| GGCATATAACTTGTACTAGT+GGG | 0.562820 | 4_3:-35244479 | None:intergenic |
| TGGGTAGGAGTTGTATTTGG+TGG | 0.563220 | 4_3:-35244460 | None:intergenic |
| ACCTGAAACCGAAGCGACTC+CGG | 0.567599 | 4_3:-35242908 | None:intergenic |
| AACTATGTTTGCCATTCCAA+AGG | 0.572275 | 4_3:-35243873 | None:intergenic |
| CTTGGTGCTTTGCAGAAGAA+GGG | 0.574830 | 4_3:+35243360 | Msa0639400:CDS |
| TCACCTGGAAGCTCCATGCA+TGG | 0.576261 | 4_3:+35242619 | Msa0639400:CDS |
| AATTTGGCTGTGGTATCAGT+TGG | 0.576596 | 4_3:-35242694 | None:intergenic |
| ATACTCAGCAATGACATTGT+CGG | 0.577684 | 4_3:-35243584 | None:intergenic |
| GCAATTCTCCAAGCAGTGAA+AGG | 0.578221 | 4_3:-35243258 | None:intergenic |
| GAGAATAGTCGTTCTGAGAG+AGG | 0.578576 | 4_3:+35244412 | Msa0639400:CDS |
| TTGGTGCTGTTAGCATGATA+AGG | 0.579781 | 4_3:-35242999 | None:intergenic |
| AATGACATACAAAACACTGT+TGG | 0.582355 | 4_3:-35243018 | None:intergenic |
| AAATGGAAGGTTCTCATGTG+AGG | 0.586590 | 4_3:-35242778 | None:intergenic |
| AAAGCACCAAGGTTACCATC+AGG | 0.588442 | 4_3:-35243348 | None:intergenic |
| TATGAGTTGATTAGAAGAGC+TGG | 0.589543 | 4_3:+35243228 | Msa0639400:CDS |
| CTATGGATCCTCCAAACCCT+AGG | 0.594763 | 4_3:+35243968 | Msa0639400:CDS |
| TATGTTTGCCATTCCAAAGG+AGG | 0.596917 | 4_3:-35243870 | None:intergenic |
| TTAGGCCAAGATTTACCTGA+TGG | 0.597509 | 4_3:+35243333 | Msa0639400:CDS |
| GCAAGATTATTCGGCATGAG+AGG | 0.600610 | 4_3:+35243932 | Msa0639400:CDS |
| TCTGATGCATATCCGCCGAA+TGG | 0.605405 | 4_3:-35243902 | None:intergenic |
| ATCATGGATAGTACTGCGAT+CGG | 0.609698 | 4_3:-35244031 | None:intergenic |
| TGGATCCTCCAAACCCTAGG+AGG | 0.611729 | 4_3:+35243971 | Msa0639400:CDS |
| ATAGTTGCTCGTCCATTCGG+CGG | 0.613192 | 4_3:+35243890 | Msa0639400:CDS |
| CCTTCTTCTGCAAAGCACCA+AGG | 0.613924 | 4_3:-35243359 | None:intergenic |
| TCAGGTTTAACTGGTGCAGG+TGG | 0.614618 | 4_3:+35244139 | Msa0639400:CDS |
| TATAACTTGTACTAGTGGGT+AGG | 0.614728 | 4_3:-35244475 | None:intergenic |
| TCCAACTGAGAAGAGGATCA+TGG | 0.614752 | 4_3:-35244047 | None:intergenic |
| TATGCAGAAAACTCCTCCTA+GGG | 0.614927 | 4_3:-35243984 | None:intergenic |
| AATGGAAGGTTCTCATGTGA+GGG | 0.615898 | 4_3:-35242777 | None:intergenic |
| CTAATCAACTCATACACCAA+AGG | 0.617873 | 4_3:-35243219 | None:intergenic |
| AGATATCCATGATAAATGGA+AGG | 0.625047 | 4_3:-35242791 | None:intergenic |
| TGAAGCAACTGATGACATGA+AGG | 0.627231 | 4_3:-35242662 | None:intergenic |
| GCTGGTTGGGGTAATATGGG+TGG | 0.628336 | 4_3:+35243174 | Msa0639400:CDS |
| TGGTAATGCAAATTTGGCTG+TGG | 0.639028 | 4_3:-35242704 | None:intergenic |
| TGATAACATGCAACCAACCA+GGG | 0.648113 | 4_3:-35243290 | None:intergenic |
| AAATCCGACGTTGGTAACGC+CGG | 0.653244 | 4_3:+35242889 | Msa0639400:CDS |
| CATAGAGTAACCATAAAGCA+GGG | 0.662197 | 4_3:-35243545 | None:intergenic |
| TGCTAAAGACAAGTTCACAA+AGG | 0.663793 | 4_3:+35243389 | Msa0639400:CDS |
| CTCAGCAATGACATTGTCGG+TGG | 0.665691 | 4_3:-35243581 | None:intergenic |
| AACCTCACAAAATCCGACGT+TGG | 0.668421 | 4_3:+35242880 | Msa0639400:CDS |
| TTCTGAGAGAGGAAAGCGTG+TGG | 0.674767 | 4_3:+35244423 | Msa0639400:CDS |
| GTTGGAGCACAAGCTGCATG+TGG | 0.687636 | 4_3:+35244064 | Msa0639400:CDS |
| AGGAAAGCACAACCATAACG+TGG | 0.709978 | 4_3:-35242979 | None:intergenic |
| CAAAGGCATAATAAGCTGAG+TGG | 0.711499 | 4_3:-35243202 | None:intergenic |
| GACTCCGGCGTTACCAACGT+CGG | 0.726114 | 4_3:-35242893 | None:intergenic |
| AGGAACATGCTACCCCACTG+TGG | 0.730068 | 4_3:-35244289 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTTAATAGTAAAATTAT+TGG | + | chr4_3:35243132-35243151 | Msa0639400:CDS | 10.0% |
| !! | TCAAAGTATATTAAATAATT+TGG | + | chr4_3:35243461-35243480 | Msa0639400:intron | 10.0% |
| !! | ATGTTTAATAGTAAAATTAT+TGG | + | chr4_3:35243132-35243151 | Msa0639400:CDS | 10.0% |
| !! | TCAAAGTATATTAAATAATT+TGG | + | chr4_3:35243461-35243480 | Msa0639400:intron | 10.0% |
| !! | AAAATTATTGGACTTGTAAA+TGG | + | chr4_3:35243144-35243163 | Msa0639400:CDS | 20.0% |
| !!! | TTGGTTATGATTTTTTTTTC+AGG | + | chr4_3:35243480-35243499 | Msa0639400:intron | 20.0% |
| !!! | CAGATCATAATTTTAAATTG+TGG | - | chr4_3:35243719-35243738 | None:intergenic | 20.0% |
| !!! | CACAATTTTTTTTAAAACCT+AGG | + | chr4_3:35243748-35243767 | Msa0639400:intron | 20.0% |
| !! | TCTAACAAATCTCTAATAAA+TGG | + | chr4_3:35243798-35243817 | Msa0639400:intron | 20.0% |
| !! | CTAATAAATGGATATAAAAC+AGG | + | chr4_3:35243810-35243829 | Msa0639400:intron | 20.0% |
| !! | AAAATTATTGGACTTGTAAA+TGG | + | chr4_3:35243144-35243163 | Msa0639400:CDS | 20.0% |
| !!! | TTGGTTATGATTTTTTTTTC+AGG | + | chr4_3:35243480-35243499 | Msa0639400:intron | 20.0% |
| !!! | CAGATCATAATTTTAAATTG+TGG | - | chr4_3:35243719-35243738 | None:intergenic | 20.0% |
| !!! | CACAATTTTTTTTAAAACCT+AGG | + | chr4_3:35243748-35243767 | Msa0639400:intron | 20.0% |
| !! | TCTAACAAATCTCTAATAAA+TGG | + | chr4_3:35243798-35243817 | Msa0639400:intron | 20.0% |
| !! | CTAATAAATGGATATAAAAC+AGG | + | chr4_3:35243810-35243829 | Msa0639400:intron | 20.0% |
| ! | TGAAAAGAGTTTGAAAACTT+TGG | - | chr4_3:35242749-35242768 | None:intergenic | 25.0% |
| !! | AGTTTTCAAACTCTTTTCAA+TGG | + | chr4_3:35242750-35242769 | Msa0639400:CDS | 25.0% |
| ! | AGAAAGATATCCATGATAAA+TGG | - | chr4_3:35242798-35242817 | None:intergenic | 25.0% |
| ! | GGTATGCTATAACAAATTAT+AGG | + | chr4_3:35243509-35243528 | Msa0639400:CDS | 25.0% |
| ! | CTATAACAAATTATAGGACA+TGG | + | chr4_3:35243515-35243534 | Msa0639400:CDS | 25.0% |
| ! | TGTAGATATATACAATCTTG+AGG | - | chr4_3:35243661-35243680 | None:intergenic | 25.0% |
| ! | AAAGATCTTCTTGATATGAA+TGG | - | chr4_3:35244109-35244128 | None:intergenic | 25.0% |
| ! | ATTCATATCAAGAAGATCTT+TGG | + | chr4_3:35244108-35244127 | Msa0639400:CDS | 25.0% |
| ! | TTCATATCAAGAAGATCTTT+GGG | + | chr4_3:35244109-35244128 | Msa0639400:CDS | 25.0% |
| ! | AAATATCAACTGTGTTAATC+CGG | - | chr4_3:35244176-35244195 | None:intergenic | 25.0% |
| ! | TGAAAAGAGTTTGAAAACTT+TGG | - | chr4_3:35242749-35242768 | None:intergenic | 25.0% |
| !! | AGTTTTCAAACTCTTTTCAA+TGG | + | chr4_3:35242750-35242769 | Msa0639400:CDS | 25.0% |
| ! | AGAAAGATATCCATGATAAA+TGG | - | chr4_3:35242798-35242817 | None:intergenic | 25.0% |
| ! | GGTATGCTATAACAAATTAT+AGG | + | chr4_3:35243509-35243528 | Msa0639400:CDS | 25.0% |
| ! | CTATAACAAATTATAGGACA+TGG | + | chr4_3:35243515-35243534 | Msa0639400:CDS | 25.0% |
| ! | TGTAGATATATACAATCTTG+AGG | - | chr4_3:35243661-35243680 | None:intergenic | 25.0% |
| ! | AAAGATCTTCTTGATATGAA+TGG | - | chr4_3:35244109-35244128 | None:intergenic | 25.0% |
| ! | ATTCATATCAAGAAGATCTT+TGG | + | chr4_3:35244108-35244127 | Msa0639400:CDS | 25.0% |
| ! | TTCATATCAAGAAGATCTTT+GGG | + | chr4_3:35244109-35244128 | Msa0639400:CDS | 25.0% |
| ! | AAATATCAACTGTGTTAATC+CGG | - | chr4_3:35244176-35244195 | None:intergenic | 25.0% |
| ! | ATCAACTGGTAATGCAAATT+TGG | - | chr4_3:35242713-35242732 | None:intergenic | 30.0% |
| AGATATCCATGATAAATGGA+AGG | - | chr4_3:35242794-35242813 | None:intergenic | 30.0% | |
| !! | TTTCAGGTAGTATTTTCTCA+AGG | + | chr4_3:35242923-35242942 | Msa0639400:CDS | 30.0% |
| AATGACATACAAAACACTGT+TGG | - | chr4_3:35243021-35243040 | None:intergenic | 30.0% | |
| ! | TCATTTGTTGAAAATGCTTC+TGG | + | chr4_3:35243036-35243055 | Msa0639400:CDS | 30.0% |
| ATAGCAGTTAGGTTTATGAT+TGG | + | chr4_3:35243063-35243082 | Msa0639400:CDS | 30.0% | |
| !! | GTTTATGATTGGTTTCTCTT+TGG | + | chr4_3:35243074-35243093 | Msa0639400:CDS | 30.0% |
| CATTTGTTTCATGCCAATAT+TGG | + | chr4_3:35243100-35243119 | Msa0639400:CDS | 30.0% | |
| ACATTGTACTCATCCAATAT+TGG | - | chr4_3:35243116-35243135 | None:intergenic | 30.0% | |
| !!! | GGTATTTTGGTCTTAACATT+AGG | + | chr4_3:35243315-35243334 | Msa0639400:CDS | 30.0% |
| !!! | GATTTTTTTTTCAGGTGTTG+TGG | + | chr4_3:35243488-35243507 | Msa0639400:intron | 30.0% |
| TTAAATTACAACTGCAGTTG+CGG | + | chr4_3:35243692-35243711 | Msa0639400:intron | 30.0% | |
| ! | AGATCTTTGGGAATTATATC+AGG | + | chr4_3:35244121-35244140 | Msa0639400:CDS | 30.0% |
| GGAATTATATCAGGTTTAAC+TGG | + | chr4_3:35244130-35244149 | Msa0639400:CDS | 30.0% | |
| ! | TCAAAATTTTCAACAGCTTC+AGG | + | chr4_3:35244205-35244224 | Msa0639400:CDS | 30.0% |
| ! | ATTTGTTCATTTTCCACAGT+GGG | + | chr4_3:35244276-35244295 | Msa0639400:CDS | 30.0% |
| ! | TCTTCATTGATCTCTTTTGA+AGG | - | chr4_3:35244319-35244338 | None:intergenic | 30.0% |
| AACACTATTACACTTCTGAA+TGG | + | chr4_3:35244338-35244357 | Msa0639400:CDS | 30.0% | |
| AATGAAGATGAAGTACAGAA+AGG | + | chr4_3:35244361-35244380 | Msa0639400:CDS | 30.0% | |
| ATGAAGATGAAGTACAGAAA+GGG | + | chr4_3:35244362-35244381 | Msa0639400:CDS | 30.0% | |
| ! | ATCAACTGGTAATGCAAATT+TGG | - | chr4_3:35242713-35242732 | None:intergenic | 30.0% |
| AGATATCCATGATAAATGGA+AGG | - | chr4_3:35242794-35242813 | None:intergenic | 30.0% | |
| !! | TTTCAGGTAGTATTTTCTCA+AGG | + | chr4_3:35242923-35242942 | Msa0639400:CDS | 30.0% |
| AATGACATACAAAACACTGT+TGG | - | chr4_3:35243021-35243040 | None:intergenic | 30.0% | |
| ! | TCATTTGTTGAAAATGCTTC+TGG | + | chr4_3:35243036-35243055 | Msa0639400:CDS | 30.0% |
| ATAGCAGTTAGGTTTATGAT+TGG | + | chr4_3:35243063-35243082 | Msa0639400:CDS | 30.0% | |
| !! | GTTTATGATTGGTTTCTCTT+TGG | + | chr4_3:35243074-35243093 | Msa0639400:CDS | 30.0% |
| CATTTGTTTCATGCCAATAT+TGG | + | chr4_3:35243100-35243119 | Msa0639400:CDS | 30.0% | |
| ACATTGTACTCATCCAATAT+TGG | - | chr4_3:35243116-35243135 | None:intergenic | 30.0% | |
| !!! | GGTATTTTGGTCTTAACATT+AGG | + | chr4_3:35243315-35243334 | Msa0639400:CDS | 30.0% |
| !!! | GATTTTTTTTTCAGGTGTTG+TGG | + | chr4_3:35243488-35243507 | Msa0639400:intron | 30.0% |
| TTAAATTACAACTGCAGTTG+CGG | + | chr4_3:35243692-35243711 | Msa0639400:intron | 30.0% | |
| ! | AGATCTTTGGGAATTATATC+AGG | + | chr4_3:35244121-35244140 | Msa0639400:CDS | 30.0% |
| GGAATTATATCAGGTTTAAC+TGG | + | chr4_3:35244130-35244149 | Msa0639400:CDS | 30.0% | |
| ! | TCAAAATTTTCAACAGCTTC+AGG | + | chr4_3:35244205-35244224 | Msa0639400:CDS | 30.0% |
| ! | ATTTGTTCATTTTCCACAGT+GGG | + | chr4_3:35244276-35244295 | Msa0639400:CDS | 30.0% |
| ! | TCTTCATTGATCTCTTTTGA+AGG | - | chr4_3:35244319-35244338 | None:intergenic | 30.0% |
| AACACTATTACACTTCTGAA+TGG | + | chr4_3:35244338-35244357 | Msa0639400:CDS | 30.0% | |
| AATGAAGATGAAGTACAGAA+AGG | + | chr4_3:35244361-35244380 | Msa0639400:CDS | 30.0% | |
| ATGAAGATGAAGTACAGAAA+GGG | + | chr4_3:35244362-35244381 | Msa0639400:CDS | 30.0% | |
| GATTTGTGTTCAGAATCAAC+TGG | - | chr4_3:35242727-35242746 | None:intergenic | 35.0% | |
| TGAGAACCTTCCATTTATCA+TGG | + | chr4_3:35242785-35242804 | Msa0639400:CDS | 35.0% | |
| ! | TATTTTCTCAAGGCTTGCAA+TGG | + | chr4_3:35242933-35242952 | Msa0639400:CDS | 35.0% |
| ! | ATTTTCTCAAGGCTTGCAAT+GGG | + | chr4_3:35242934-35242953 | Msa0639400:CDS | 35.0% |
| ! | CTTCTGGTTATATAGCAGTT+AGG | + | chr4_3:35243052-35243071 | Msa0639400:CDS | 35.0% |
| CTAATCAACTCATACACCAA+AGG | - | chr4_3:35243222-35243241 | None:intergenic | 35.0% | |
| !! | TATGAGTTGATTAGAAGAGC+TGG | + | chr4_3:35243228-35243247 | Msa0639400:CDS | 35.0% |
| !!! | AGAATTGCCTTTTTTATCCC+TGG | + | chr4_3:35243273-35243292 | Msa0639400:CDS | 35.0% |
| ! | GCATGTTATCATGGGTATTT+TGG | + | chr4_3:35243302-35243321 | Msa0639400:CDS | 35.0% |
| TGCTAAAGACAAGTTCACAA+AGG | + | chr4_3:35243389-35243408 | Msa0639400:CDS | 35.0% | |
| ! | AGTTCACAAAGGTTAGTTAC+TGG | + | chr4_3:35243400-35243419 | Msa0639400:intron | 35.0% |
| CATAGAGTAACCATAAAGCA+GGG | - | chr4_3:35243548-35243567 | None:intergenic | 35.0% | |
| CTGCTTTATGGTTACTCTAT+GGG | + | chr4_3:35243547-35243566 | Msa0639400:CDS | 35.0% | |
| ATACTCAGCAATGACATTGT+CGG | - | chr4_3:35243587-35243606 | None:intergenic | 35.0% | |
| ! | TTGCTGAGTATTTCTATGAC+AGG | + | chr4_3:35243596-35243615 | Msa0639400:CDS | 35.0% |
| AATGTTCGTTACAATCTCCT+AGG | - | chr4_3:35243768-35243787 | None:intergenic | 35.0% | |
| AACTATGTTTGCCATTCCAA+AGG | - | chr4_3:35243876-35243895 | None:intergenic | 35.0% | |
| GATGTTGCAGCAAGATTATT+CGG | + | chr4_3:35243923-35243942 | Msa0639400:CDS | 35.0% | |
| GGAAAATGAACAAATGCAAC+AGG | - | chr4_3:35244271-35244290 | None:intergenic | 35.0% | |
| ! | CATTTGTTCATTTTCCACAG+TGG | + | chr4_3:35244275-35244294 | Msa0639400:CDS | 35.0% |
| ! | TTTGTTCATTTTCCACAGTG+GGG | + | chr4_3:35244277-35244296 | Msa0639400:CDS | 35.0% |
| !! | TCATTGATCTCTTTTGAAGG+TGG | - | chr4_3:35244316-35244335 | None:intergenic | 35.0% |
| GATTTGTGTTCAGAATCAAC+TGG | - | chr4_3:35242727-35242746 | None:intergenic | 35.0% | |
| TGAGAACCTTCCATTTATCA+TGG | + | chr4_3:35242785-35242804 | Msa0639400:CDS | 35.0% | |
| ! | TATTTTCTCAAGGCTTGCAA+TGG | + | chr4_3:35242933-35242952 | Msa0639400:CDS | 35.0% |
| ! | ATTTTCTCAAGGCTTGCAAT+GGG | + | chr4_3:35242934-35242953 | Msa0639400:CDS | 35.0% |
| ! | CTTCTGGTTATATAGCAGTT+AGG | + | chr4_3:35243052-35243071 | Msa0639400:CDS | 35.0% |
| CTAATCAACTCATACACCAA+AGG | - | chr4_3:35243222-35243241 | None:intergenic | 35.0% | |
| !! | TATGAGTTGATTAGAAGAGC+TGG | + | chr4_3:35243228-35243247 | Msa0639400:CDS | 35.0% |
| !!! | AGAATTGCCTTTTTTATCCC+TGG | + | chr4_3:35243273-35243292 | Msa0639400:CDS | 35.0% |
| ! | GCATGTTATCATGGGTATTT+TGG | + | chr4_3:35243302-35243321 | Msa0639400:CDS | 35.0% |
| TGCTAAAGACAAGTTCACAA+AGG | + | chr4_3:35243389-35243408 | Msa0639400:CDS | 35.0% | |
| ! | AGTTCACAAAGGTTAGTTAC+TGG | + | chr4_3:35243400-35243419 | Msa0639400:intron | 35.0% |
| CATAGAGTAACCATAAAGCA+GGG | - | chr4_3:35243548-35243567 | None:intergenic | 35.0% | |
| CTGCTTTATGGTTACTCTAT+GGG | + | chr4_3:35243547-35243566 | Msa0639400:CDS | 35.0% | |
| ATACTCAGCAATGACATTGT+CGG | - | chr4_3:35243587-35243606 | None:intergenic | 35.0% | |
| ! | TTGCTGAGTATTTCTATGAC+AGG | + | chr4_3:35243596-35243615 | Msa0639400:CDS | 35.0% |
| AATGTTCGTTACAATCTCCT+AGG | - | chr4_3:35243768-35243787 | None:intergenic | 35.0% | |
| AACTATGTTTGCCATTCCAA+AGG | - | chr4_3:35243876-35243895 | None:intergenic | 35.0% | |
| GATGTTGCAGCAAGATTATT+CGG | + | chr4_3:35243923-35243942 | Msa0639400:CDS | 35.0% | |
| GGAAAATGAACAAATGCAAC+AGG | - | chr4_3:35244271-35244290 | None:intergenic | 35.0% | |
| ! | CATTTGTTCATTTTCCACAG+TGG | + | chr4_3:35244275-35244294 | Msa0639400:CDS | 35.0% |
| ! | TTTGTTCATTTTCCACAGTG+GGG | + | chr4_3:35244277-35244296 | Msa0639400:CDS | 35.0% |
| !! | TCATTGATCTCTTTTGAAGG+TGG | - | chr4_3:35244316-35244335 | None:intergenic | 35.0% |
| TGAAGCAACTGATGACATGA+AGG | - | chr4_3:35242665-35242684 | None:intergenic | 40.0% | |
| AATTTGGCTGTGGTATCAGT+TGG | - | chr4_3:35242697-35242716 | None:intergenic | 40.0% | |
| ! | TGGTAATGCAAATTTGGCTG+TGG | - | chr4_3:35242707-35242726 | None:intergenic | 40.0% |
| AATGGAAGGTTCTCATGTGA+GGG | - | chr4_3:35242780-35242799 | None:intergenic | 40.0% | |
| AAATGGAAGGTTCTCATGTG+AGG | - | chr4_3:35242781-35242800 | None:intergenic | 40.0% | |
| TTAAGGTTGTCCCGAATGAT+CGG | - | chr4_3:35242862-35242881 | None:intergenic | 40.0% | |
| GGTGCAATTTGTGACCTATT+AGG | + | chr4_3:35242955-35242974 | Msa0639400:CDS | 40.0% | |
| AACCATAACGTGGACCTAAT+AGG | - | chr4_3:35242972-35242991 | None:intergenic | 40.0% | |
| !! | TTGGTGCTGTTAGCATGATA+AGG | - | chr4_3:35243002-35243021 | None:intergenic | 40.0% |
| ! | CAAAGGCATAATAAGCTGAG+TGG | - | chr4_3:35243205-35243224 | None:intergenic | 40.0% |
| CACTCAGCTTATTATGCCTT+TGG | + | chr4_3:35243203-35243222 | Msa0639400:CDS | 40.0% | |
| !!! | TTGCCTTTTTTATCCCTGGT+TGG | + | chr4_3:35243277-35243296 | Msa0639400:CDS | 40.0% |
| CAACCAACCAGGGATAAAAA+AGG | - | chr4_3:35243283-35243302 | None:intergenic | 40.0% | |
| TGATAACATGCAACCAACCA+GGG | - | chr4_3:35243293-35243312 | None:intergenic | 40.0% | |
| ATGATAACATGCAACCAACC+AGG | - | chr4_3:35243294-35243313 | None:intergenic | 40.0% | |
| ! | TGGTTGGTTGCATGTTATCA+TGG | + | chr4_3:35243293-35243312 | Msa0639400:CDS | 40.0% |
| ! | GGTTGGTTGCATGTTATCAT+GGG | + | chr4_3:35243294-35243313 | Msa0639400:CDS | 40.0% |
| TTAGGCCAAGATTTACCTGA+TGG | + | chr4_3:35243333-35243352 | Msa0639400:CDS | 40.0% | |
| GGTTACCATCAGGTAAATCT+TGG | - | chr4_3:35243341-35243360 | None:intergenic | 40.0% | |
| GATTTACCTGATGGTAACCT+TGG | + | chr4_3:35243342-35243361 | Msa0639400:CDS | 40.0% | |
| ! | TGGATTTTTGCCCTGCTTTA+TGG | + | chr4_3:35243535-35243554 | Msa0639400:CDS | 40.0% |
| CCATAGAGTAACCATAAAGC+AGG | - | chr4_3:35243549-35243568 | None:intergenic | 40.0% | |
| CCTGCTTTATGGTTACTCTA+TGG | + | chr4_3:35243546-35243565 | Msa0639400:CDS | 40.0% | |
| TATGTTTGCCATTCCAAAGG+AGG | - | chr4_3:35243873-35243892 | None:intergenic | 40.0% | |
| AACATAGTTGCTCGTCCATT+CGG | + | chr4_3:35243887-35243906 | Msa0639400:CDS | 40.0% | |
| TATGCAGAAAACTCCTCCTA+GGG | - | chr4_3:35243987-35244006 | None:intergenic | 40.0% | |
| ATATGCAGAAAACTCCTCCT+AGG | - | chr4_3:35243988-35244007 | None:intergenic | 40.0% | |
| ! | TAGGAGGAGTTTTCTGCATA+TGG | + | chr4_3:35243987-35244006 | Msa0639400:CDS | 40.0% |
| ! | GGAGTTTTCTGCATATGGTT+AGG | + | chr4_3:35243992-35244011 | Msa0639400:CDS | 40.0% |
| ATCATGGATAGTACTGCGAT+CGG | - | chr4_3:35244034-35244053 | None:intergenic | 40.0% | |
| ATATCAGGTTTAACTGGTGC+AGG | + | chr4_3:35244136-35244155 | Msa0639400:CDS | 40.0% | |
| !! | TGATCTCTTTTGAAGGTGGA+AGG | - | chr4_3:35244312-35244331 | None:intergenic | 40.0% |
| TTCTCAGCAAACCTAAGACT+TGG | - | chr4_3:35244397-35244416 | None:intergenic | 40.0% | |
| ! | TAGTGGGTAGGAGTTGTATT+TGG | - | chr4_3:35244466-35244485 | None:intergenic | 40.0% |
| TGAAGCAACTGATGACATGA+AGG | - | chr4_3:35242665-35242684 | None:intergenic | 40.0% | |
| AATTTGGCTGTGGTATCAGT+TGG | - | chr4_3:35242697-35242716 | None:intergenic | 40.0% | |
| ! | TGGTAATGCAAATTTGGCTG+TGG | - | chr4_3:35242707-35242726 | None:intergenic | 40.0% |
| AATGGAAGGTTCTCATGTGA+GGG | - | chr4_3:35242780-35242799 | None:intergenic | 40.0% | |
| AAATGGAAGGTTCTCATGTG+AGG | - | chr4_3:35242781-35242800 | None:intergenic | 40.0% | |
| TTAAGGTTGTCCCGAATGAT+CGG | - | chr4_3:35242862-35242881 | None:intergenic | 40.0% | |
| GGTGCAATTTGTGACCTATT+AGG | + | chr4_3:35242955-35242974 | Msa0639400:CDS | 40.0% | |
| AACCATAACGTGGACCTAAT+AGG | - | chr4_3:35242972-35242991 | None:intergenic | 40.0% | |
| !! | TTGGTGCTGTTAGCATGATA+AGG | - | chr4_3:35243002-35243021 | None:intergenic | 40.0% |
| ! | CAAAGGCATAATAAGCTGAG+TGG | - | chr4_3:35243205-35243224 | None:intergenic | 40.0% |
| CACTCAGCTTATTATGCCTT+TGG | + | chr4_3:35243203-35243222 | Msa0639400:CDS | 40.0% | |
| !!! | TTGCCTTTTTTATCCCTGGT+TGG | + | chr4_3:35243277-35243296 | Msa0639400:CDS | 40.0% |
| CAACCAACCAGGGATAAAAA+AGG | - | chr4_3:35243283-35243302 | None:intergenic | 40.0% | |
| TGATAACATGCAACCAACCA+GGG | - | chr4_3:35243293-35243312 | None:intergenic | 40.0% | |
| ATGATAACATGCAACCAACC+AGG | - | chr4_3:35243294-35243313 | None:intergenic | 40.0% | |
| ! | TGGTTGGTTGCATGTTATCA+TGG | + | chr4_3:35243293-35243312 | Msa0639400:CDS | 40.0% |
| ! | GGTTGGTTGCATGTTATCAT+GGG | + | chr4_3:35243294-35243313 | Msa0639400:CDS | 40.0% |
| TTAGGCCAAGATTTACCTGA+TGG | + | chr4_3:35243333-35243352 | Msa0639400:CDS | 40.0% | |
| GGTTACCATCAGGTAAATCT+TGG | - | chr4_3:35243341-35243360 | None:intergenic | 40.0% | |
| GATTTACCTGATGGTAACCT+TGG | + | chr4_3:35243342-35243361 | Msa0639400:CDS | 40.0% | |
| ! | TGGATTTTTGCCCTGCTTTA+TGG | + | chr4_3:35243535-35243554 | Msa0639400:CDS | 40.0% |
| CCATAGAGTAACCATAAAGC+AGG | - | chr4_3:35243549-35243568 | None:intergenic | 40.0% | |
| CCTGCTTTATGGTTACTCTA+TGG | + | chr4_3:35243546-35243565 | Msa0639400:CDS | 40.0% | |
| TATGTTTGCCATTCCAAAGG+AGG | - | chr4_3:35243873-35243892 | None:intergenic | 40.0% | |
| AACATAGTTGCTCGTCCATT+CGG | + | chr4_3:35243887-35243906 | Msa0639400:CDS | 40.0% | |
| TATGCAGAAAACTCCTCCTA+GGG | - | chr4_3:35243987-35244006 | None:intergenic | 40.0% | |
| ATATGCAGAAAACTCCTCCT+AGG | - | chr4_3:35243988-35244007 | None:intergenic | 40.0% | |
| ! | TAGGAGGAGTTTTCTGCATA+TGG | + | chr4_3:35243987-35244006 | Msa0639400:CDS | 40.0% |
| ! | GGAGTTTTCTGCATATGGTT+AGG | + | chr4_3:35243992-35244011 | Msa0639400:CDS | 40.0% |
| ATCATGGATAGTACTGCGAT+CGG | - | chr4_3:35244034-35244053 | None:intergenic | 40.0% | |
| ATATCAGGTTTAACTGGTGC+AGG | + | chr4_3:35244136-35244155 | Msa0639400:CDS | 40.0% | |
| !! | TGATCTCTTTTGAAGGTGGA+AGG | - | chr4_3:35244312-35244331 | None:intergenic | 40.0% |
| TTCTCAGCAAACCTAAGACT+TGG | - | chr4_3:35244397-35244416 | None:intergenic | 40.0% | |
| ! | TAGTGGGTAGGAGTTGTATT+TGG | - | chr4_3:35244466-35244485 | None:intergenic | 40.0% |
| TCTTCCAGTTACTCCATGCA+TGG | - | chr4_3:35242635-35242654 | None:intergenic | 45.0% | |
| GTCATCAGTTGCTTCACCAA+TGG | + | chr4_3:35242669-35242688 | Msa0639400:CDS | 45.0% | |
| GTGGTATCAGTTGGAACCAT+TGG | - | chr4_3:35242688-35242707 | None:intergenic | 45.0% | |
| CACCATTAGTCCCGATCATT+CGG | + | chr4_3:35242848-35242867 | Msa0639400:CDS | 45.0% | |
| ACCATTAGTCCCGATCATTC+GGG | + | chr4_3:35242849-35242868 | Msa0639400:CDS | 45.0% | |
| TAAGGTTGTCCCGAATGATC+GGG | - | chr4_3:35242861-35242880 | None:intergenic | 45.0% | |
| ! | CGTCGGATTTTGTGAGGTTA+AGG | - | chr4_3:35242879-35242898 | None:intergenic | 45.0% |
| AACCTCACAAAATCCGACGT+TGG | + | chr4_3:35242880-35242899 | Msa0639400:CDS | 45.0% | |
| ! | TACCAACGTCGGATTTTGTG+AGG | - | chr4_3:35242885-35242904 | None:intergenic | 45.0% |
| GACCTATTAGGTCCACGTTA+TGG | + | chr4_3:35242967-35242986 | Msa0639400:CDS | 45.0% | |
| ! | AGGAAAGCACAACCATAACG+TGG | - | chr4_3:35242982-35243001 | None:intergenic | 45.0% |
| CTTGTAAATGGTACTGCTGC+TGG | + | chr4_3:35243156-35243175 | Msa0639400:CDS | 45.0% | |
| TAAATGGTACTGCTGCTGGT+TGG | + | chr4_3:35243160-35243179 | Msa0639400:CDS | 45.0% | |
| ! | AAATGGTACTGCTGCTGGTT+GGG | + | chr4_3:35243161-35243180 | Msa0639400:CDS | 45.0% |
| GCAATTCTCCAAGCAGTGAA+AGG | - | chr4_3:35243261-35243280 | None:intergenic | 45.0% | |
| ! | AAAGCACCAAGGTTACCATC+AGG | - | chr4_3:35243351-35243370 | None:intergenic | 45.0% |
| !! | CTTGGTGCTTTGCAGAAGAA+GGG | + | chr4_3:35243360-35243379 | Msa0639400:CDS | 45.0% |
| AACCTAAAGCTACACACAGC+CGG | + | chr4_3:35243836-35243855 | Msa0639400:CDS | 45.0% | |
| AAAGGAGGCAGCAATGATTC+CGG | - | chr4_3:35243858-35243877 | None:intergenic | 45.0% | |
| GCAAGATTATTCGGCATGAG+AGG | + | chr4_3:35243932-35243951 | Msa0639400:CDS | 45.0% | |
| GAGGAAGACTATGGACACTA+TGG | + | chr4_3:35243951-35243970 | Msa0639400:CDS | 45.0% | |
| AGAAAACTCCTCCTAGGGTT+TGG | - | chr4_3:35243982-35244001 | None:intergenic | 45.0% | |
| TCCATGATCCTCTTCTCAGT+TGG | + | chr4_3:35244046-35244065 | Msa0639400:CDS | 45.0% | |
| TCCAACTGAGAAGAGGATCA+TGG | - | chr4_3:35244050-35244069 | None:intergenic | 45.0% | |
| CAACAGCTTCAGGTCTTTCA+TGG | + | chr4_3:35244215-35244234 | Msa0639400:CDS | 45.0% | |
| AGCTTCAGGTCTTTCATGGA+TGG | + | chr4_3:35244219-35244238 | Msa0639400:CDS | 45.0% | |
| GCTTCAGGTCTTTCATGGAT+GGG | + | chr4_3:35244220-35244239 | Msa0639400:CDS | 45.0% | |
| TGGATGGGTGCAATGATTGT+TGG | + | chr4_3:35244235-35244254 | Msa0639400:CDS | 45.0% | |
| GGTTGCATCAACCAAGTCTT+AGG | + | chr4_3:35244383-35244402 | Msa0639400:CDS | 45.0% | |
| !! | GAGAATAGTCGTTCTGAGAG+AGG | + | chr4_3:35244412-35244431 | Msa0639400:CDS | 45.0% |
| TGGGTAGGAGTTGTATTTGG+TGG | - | chr4_3:35244463-35244482 | None:intergenic | 45.0% | |
| TCTTCCAGTTACTCCATGCA+TGG | - | chr4_3:35242635-35242654 | None:intergenic | 45.0% | |
| GTCATCAGTTGCTTCACCAA+TGG | + | chr4_3:35242669-35242688 | Msa0639400:CDS | 45.0% | |
| GTGGTATCAGTTGGAACCAT+TGG | - | chr4_3:35242688-35242707 | None:intergenic | 45.0% | |
| CACCATTAGTCCCGATCATT+CGG | + | chr4_3:35242848-35242867 | Msa0639400:CDS | 45.0% | |
| ACCATTAGTCCCGATCATTC+GGG | + | chr4_3:35242849-35242868 | Msa0639400:CDS | 45.0% | |
| TAAGGTTGTCCCGAATGATC+GGG | - | chr4_3:35242861-35242880 | None:intergenic | 45.0% | |
| ! | CGTCGGATTTTGTGAGGTTA+AGG | - | chr4_3:35242879-35242898 | None:intergenic | 45.0% |
| AACCTCACAAAATCCGACGT+TGG | + | chr4_3:35242880-35242899 | Msa0639400:CDS | 45.0% | |
| ! | TACCAACGTCGGATTTTGTG+AGG | - | chr4_3:35242885-35242904 | None:intergenic | 45.0% |
| GACCTATTAGGTCCACGTTA+TGG | + | chr4_3:35242967-35242986 | Msa0639400:CDS | 45.0% | |
| ! | AGGAAAGCACAACCATAACG+TGG | - | chr4_3:35242982-35243001 | None:intergenic | 45.0% |
| CTTGTAAATGGTACTGCTGC+TGG | + | chr4_3:35243156-35243175 | Msa0639400:CDS | 45.0% | |
| TAAATGGTACTGCTGCTGGT+TGG | + | chr4_3:35243160-35243179 | Msa0639400:CDS | 45.0% | |
| ! | AAATGGTACTGCTGCTGGTT+GGG | + | chr4_3:35243161-35243180 | Msa0639400:CDS | 45.0% |
| GCAATTCTCCAAGCAGTGAA+AGG | - | chr4_3:35243261-35243280 | None:intergenic | 45.0% | |
| ! | AAAGCACCAAGGTTACCATC+AGG | - | chr4_3:35243351-35243370 | None:intergenic | 45.0% |
| !! | CTTGGTGCTTTGCAGAAGAA+GGG | + | chr4_3:35243360-35243379 | Msa0639400:CDS | 45.0% |
| AACCTAAAGCTACACACAGC+CGG | + | chr4_3:35243836-35243855 | Msa0639400:CDS | 45.0% | |
| AAAGGAGGCAGCAATGATTC+CGG | - | chr4_3:35243858-35243877 | None:intergenic | 45.0% | |
| GCAAGATTATTCGGCATGAG+AGG | + | chr4_3:35243932-35243951 | Msa0639400:CDS | 45.0% | |
| GAGGAAGACTATGGACACTA+TGG | + | chr4_3:35243951-35243970 | Msa0639400:CDS | 45.0% | |
| AGAAAACTCCTCCTAGGGTT+TGG | - | chr4_3:35243982-35244001 | None:intergenic | 45.0% | |
| TCCATGATCCTCTTCTCAGT+TGG | + | chr4_3:35244046-35244065 | Msa0639400:CDS | 45.0% | |
| TCCAACTGAGAAGAGGATCA+TGG | - | chr4_3:35244050-35244069 | None:intergenic | 45.0% | |
| CAACAGCTTCAGGTCTTTCA+TGG | + | chr4_3:35244215-35244234 | Msa0639400:CDS | 45.0% | |
| AGCTTCAGGTCTTTCATGGA+TGG | + | chr4_3:35244219-35244238 | Msa0639400:CDS | 45.0% | |
| GCTTCAGGTCTTTCATGGAT+GGG | + | chr4_3:35244220-35244239 | Msa0639400:CDS | 45.0% | |
| TGGATGGGTGCAATGATTGT+TGG | + | chr4_3:35244235-35244254 | Msa0639400:CDS | 45.0% | |
| GGTTGCATCAACCAAGTCTT+AGG | + | chr4_3:35244383-35244402 | Msa0639400:CDS | 45.0% | |
| !! | GAGAATAGTCGTTCTGAGAG+AGG | + | chr4_3:35244412-35244431 | Msa0639400:CDS | 45.0% |
| TGGGTAGGAGTTGTATTTGG+TGG | - | chr4_3:35244463-35244482 | None:intergenic | 45.0% | |
| GCTGATATTGAGGGTTCACC+TGG | + | chr4_3:35242604-35242623 | Msa0639400:CDS | 50.0% | |
| AGCTCCATGCATGGAGTAAC+TGG | + | chr4_3:35242628-35242647 | Msa0639400:CDS | 50.0% | |
| CTGTTTCGTCTCGACATTCG+CGG | + | chr4_3:35242822-35242841 | Msa0639400:CDS | 50.0% | |
| TCCCGAATGATCGGGACTAA+TGG | - | chr4_3:35242853-35242872 | None:intergenic | 50.0% | |
| !! | AAATCCGACGTTGGTAACGC+CGG | + | chr4_3:35242889-35242908 | Msa0639400:CDS | 50.0% |
| ! | AATGGTACTGCTGCTGGTTG+GGG | + | chr4_3:35243162-35243181 | Msa0639400:CDS | 50.0% |
| ! | TGCTGCTGGTTGGGGTAATA+TGG | + | chr4_3:35243170-35243189 | Msa0639400:CDS | 50.0% |
| ! | GCTGCTGGTTGGGGTAATAT+GGG | + | chr4_3:35243171-35243190 | Msa0639400:CDS | 50.0% |
| GTTGGGGTAATATGGGTGGT+GGG | + | chr4_3:35243178-35243197 | Msa0639400:CDS | 50.0% | |
| TTGGGGTAATATGGGTGGTG+GGG | + | chr4_3:35243179-35243198 | Msa0639400:CDS | 50.0% | |
| ! | GTGCTACTCCTTTCACTGCT+TGG | + | chr4_3:35243250-35243269 | Msa0639400:CDS | 50.0% |
| ! | CCTTCTTCTGCAAAGCACCA+AGG | - | chr4_3:35243362-35243381 | None:intergenic | 50.0% |
| !! | CCTTGGTGCTTTGCAGAAGA+AGG | + | chr4_3:35243359-35243378 | Msa0639400:CDS | 50.0% |
| CTCAGCAATGACATTGTCGG+TGG | - | chr4_3:35243584-35243603 | None:intergenic | 50.0% | |
| TTCCGGCTGTGTGTAGCTTT+AGG | - | chr4_3:35243841-35243860 | None:intergenic | 50.0% | |
| GGAATCATTGCTGCCTCCTT+TGG | + | chr4_3:35243857-35243876 | Msa0639400:CDS | 50.0% | |
| ! | CATTGCTGCCTCCTTTGGAA+TGG | + | chr4_3:35243862-35243881 | Msa0639400:CDS | 50.0% |
| ATAGTTGCTCGTCCATTCGG+CGG | + | chr4_3:35243890-35243909 | Msa0639400:CDS | 50.0% | |
| TCTGATGCATATCCGCCGAA+TGG | - | chr4_3:35243905-35243924 | None:intergenic | 50.0% | |
| TCGGCATGAGAGGAAGACTA+TGG | + | chr4_3:35243942-35243961 | Msa0639400:CDS | 50.0% | |
| CTATGGATCCTCCAAACCCT+AGG | + | chr4_3:35243968-35243987 | Msa0639400:CDS | 50.0% | |
| AAACTCCTCCTAGGGTTTGG+AGG | - | chr4_3:35243979-35243998 | None:intergenic | 50.0% | |
| CTTGTGCTCCAACTGAGAAG+AGG | - | chr4_3:35244057-35244076 | None:intergenic | 50.0% | |
| GCTGCATGTGGTGCAACATT+TGG | + | chr4_3:35244076-35244095 | Msa0639400:CDS | 50.0% | |
| TCAGGTTTAACTGGTGCAGG+TGG | + | chr4_3:35244139-35244158 | Msa0639400:CDS | 50.0% | |
| ACTGGTGCAGGTGGAAACTT+TGG | + | chr4_3:35244148-35244167 | Msa0639400:CDS | 50.0% | |
| ! | GCAGGTGGAAACTTTGGTTC+CGG | + | chr4_3:35244154-35244173 | Msa0639400:CDS | 50.0% |
| ! | TTCTGAGAGAGGAAAGCGTG+TGG | + | chr4_3:35244423-35244442 | Msa0639400:CDS | 50.0% |
| GCTGATATTGAGGGTTCACC+TGG | + | chr4_3:35242604-35242623 | Msa0639400:CDS | 50.0% | |
| AGCTCCATGCATGGAGTAAC+TGG | + | chr4_3:35242628-35242647 | Msa0639400:CDS | 50.0% | |
| CTGTTTCGTCTCGACATTCG+CGG | + | chr4_3:35242822-35242841 | Msa0639400:CDS | 50.0% | |
| TCCCGAATGATCGGGACTAA+TGG | - | chr4_3:35242853-35242872 | None:intergenic | 50.0% | |
| !! | AAATCCGACGTTGGTAACGC+CGG | + | chr4_3:35242889-35242908 | Msa0639400:CDS | 50.0% |
| ! | AATGGTACTGCTGCTGGTTG+GGG | + | chr4_3:35243162-35243181 | Msa0639400:CDS | 50.0% |
| ! | TGCTGCTGGTTGGGGTAATA+TGG | + | chr4_3:35243170-35243189 | Msa0639400:CDS | 50.0% |
| ! | GCTGCTGGTTGGGGTAATAT+GGG | + | chr4_3:35243171-35243190 | Msa0639400:CDS | 50.0% |
| GTTGGGGTAATATGGGTGGT+GGG | + | chr4_3:35243178-35243197 | Msa0639400:CDS | 50.0% | |
| TTGGGGTAATATGGGTGGTG+GGG | + | chr4_3:35243179-35243198 | Msa0639400:CDS | 50.0% | |
| ! | GTGCTACTCCTTTCACTGCT+TGG | + | chr4_3:35243250-35243269 | Msa0639400:CDS | 50.0% |
| ! | CCTTCTTCTGCAAAGCACCA+AGG | - | chr4_3:35243362-35243381 | None:intergenic | 50.0% |
| !! | CCTTGGTGCTTTGCAGAAGA+AGG | + | chr4_3:35243359-35243378 | Msa0639400:CDS | 50.0% |
| CTCAGCAATGACATTGTCGG+TGG | - | chr4_3:35243584-35243603 | None:intergenic | 50.0% | |
| TTCCGGCTGTGTGTAGCTTT+AGG | - | chr4_3:35243841-35243860 | None:intergenic | 50.0% | |
| GGAATCATTGCTGCCTCCTT+TGG | + | chr4_3:35243857-35243876 | Msa0639400:CDS | 50.0% | |
| ! | CATTGCTGCCTCCTTTGGAA+TGG | + | chr4_3:35243862-35243881 | Msa0639400:CDS | 50.0% |
| ATAGTTGCTCGTCCATTCGG+CGG | + | chr4_3:35243890-35243909 | Msa0639400:CDS | 50.0% | |
| TCTGATGCATATCCGCCGAA+TGG | - | chr4_3:35243905-35243924 | None:intergenic | 50.0% | |
| TCGGCATGAGAGGAAGACTA+TGG | + | chr4_3:35243942-35243961 | Msa0639400:CDS | 50.0% | |
| CTATGGATCCTCCAAACCCT+AGG | + | chr4_3:35243968-35243987 | Msa0639400:CDS | 50.0% | |
| AAACTCCTCCTAGGGTTTGG+AGG | - | chr4_3:35243979-35243998 | None:intergenic | 50.0% | |
| CTTGTGCTCCAACTGAGAAG+AGG | - | chr4_3:35244057-35244076 | None:intergenic | 50.0% | |
| GCTGCATGTGGTGCAACATT+TGG | + | chr4_3:35244076-35244095 | Msa0639400:CDS | 50.0% | |
| TCAGGTTTAACTGGTGCAGG+TGG | + | chr4_3:35244139-35244158 | Msa0639400:CDS | 50.0% | |
| ACTGGTGCAGGTGGAAACTT+TGG | + | chr4_3:35244148-35244167 | Msa0639400:CDS | 50.0% | |
| ! | GCAGGTGGAAACTTTGGTTC+CGG | + | chr4_3:35244154-35244173 | Msa0639400:CDS | 50.0% |
| ! | TTCTGAGAGAGGAAAGCGTG+TGG | + | chr4_3:35244423-35244442 | Msa0639400:CDS | 50.0% |
| TCACCTGGAAGCTCCATGCA+TGG | + | chr4_3:35242619-35242638 | Msa0639400:CDS | 55.0% | |
| ACTCCATGCATGGAGCTTCC+AGG | - | chr4_3:35242625-35242644 | None:intergenic | 55.0% | |
| CGCGAATGTCGAGACGAAAC+AGG | - | chr4_3:35242824-35242843 | None:intergenic | 55.0% | |
| ACCTGAAACCGAAGCGACTC+CGG | - | chr4_3:35242911-35242930 | None:intergenic | 55.0% | |
| GCTGGTTGGGGTAATATGGG+TGG | + | chr4_3:35243174-35243193 | Msa0639400:CDS | 55.0% | |
| GGTTGGGGTAATATGGGTGG+TGG | + | chr4_3:35243177-35243196 | Msa0639400:CDS | 55.0% | |
| TGGATCCTCCAAACCCTAGG+AGG | + | chr4_3:35243971-35243990 | Msa0639400:CDS | 55.0% | |
| GTTGGAGCACAAGCTGCATG+TGG | + | chr4_3:35244064-35244083 | Msa0639400:CDS | 55.0% | |
| AGGAACATGCTACCCCACTG+TGG | - | chr4_3:35244292-35244311 | None:intergenic | 55.0% | |
| TCACCTGGAAGCTCCATGCA+TGG | + | chr4_3:35242619-35242638 | Msa0639400:CDS | 55.0% | |
| ACTCCATGCATGGAGCTTCC+AGG | - | chr4_3:35242625-35242644 | None:intergenic | 55.0% | |
| CGCGAATGTCGAGACGAAAC+AGG | - | chr4_3:35242824-35242843 | None:intergenic | 55.0% | |
| ACCTGAAACCGAAGCGACTC+CGG | - | chr4_3:35242911-35242930 | None:intergenic | 55.0% | |
| GCTGGTTGGGGTAATATGGG+TGG | + | chr4_3:35243174-35243193 | Msa0639400:CDS | 55.0% | |
| GGTTGGGGTAATATGGGTGG+TGG | + | chr4_3:35243177-35243196 | Msa0639400:CDS | 55.0% | |
| TGGATCCTCCAAACCCTAGG+AGG | + | chr4_3:35243971-35243990 | Msa0639400:CDS | 55.0% | |
| GTTGGAGCACAAGCTGCATG+TGG | + | chr4_3:35244064-35244083 | Msa0639400:CDS | 55.0% | |
| AGGAACATGCTACCCCACTG+TGG | - | chr4_3:35244292-35244311 | None:intergenic | 55.0% | |
| GACTCCGGCGTTACCAACGT+CGG | - | chr4_3:35242896-35242915 | None:intergenic | 60.0% | |
| ! | TGGTAACGCCGGAGTCGCTT+CGG | + | chr4_3:35242900-35242919 | Msa0639400:CDS | 60.0% |
| GACTCCGGCGTTACCAACGT+CGG | - | chr4_3:35242896-35242915 | None:intergenic | 60.0% | |
| ! | TGGTAACGCCGGAGTCGCTT+CGG | + | chr4_3:35242900-35242919 | Msa0639400:CDS | 60.0% |
| GCCGGAGTCGCTTCGGTTTC+AGG | + | chr4_3:35242907-35242926 | Msa0639400:CDS | 65.0% | |
| GCCGGAGTCGCTTCGGTTTC+AGG | + | chr4_3:35242907-35242926 | Msa0639400:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 35242601 | 35244486 | 35242601 | ID=Msa0639400;Name=Msa0639400 |
| chr4_3 | mRNA | 35242601 | 35244486 | 35242601 | ID=Msa0639400-mRNA-1;Parent=Msa0639400;Name=Msa0639400-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|526 |
| chr4_3 | exon | 35242601 | 35243410 | 35242601 | ID=Msa0639400-mRNA-1:exon:8279;Parent=Msa0639400-mRNA-1 |
| chr4_3 | exon | 35243502 | 35243617 | 35243502 | ID=Msa0639400-mRNA-1:exon:8280;Parent=Msa0639400-mRNA-1 |
| chr4_3 | exon | 35243832 | 35244486 | 35243832 | ID=Msa0639400-mRNA-1:exon:8281;Parent=Msa0639400-mRNA-1 |
| chr4_3 | CDS | 35242601 | 35243410 | 35242601 | ID=Msa0639400-mRNA-1:cds;Parent=Msa0639400-mRNA-1 |
| chr4_3 | CDS | 35243502 | 35243617 | 35243502 | ID=Msa0639400-mRNA-1:cds;Parent=Msa0639400-mRNA-1 |
| chr4_3 | CDS | 35243832 | 35244486 | 35243832 | ID=Msa0639400-mRNA-1:cds;Parent=Msa0639400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
