AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0391270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0391270 MtrunA17_Chr8g0373301 95.117 471 23 0 1 471 1 471 0.0 917
Msa0391270 MtrunA17_Chr8g0339631 72.921 469 118 5 7 468 4 470 0.0 667
Msa0391270 MtrunA17_Chr8g0339451 70.259 464 128 4 12 466 1 463 0.0 638
Msa0391270 MtrunA17_Chr8g0339461 69.017 468 135 4 8 466 5 471 0.0 627
Msa0391270 MtrunA17_Chr7g0232401 60.759 474 170 7 7 470 4 471 0.0 570
Msa0391270 MtrunA17_Chr8g0339441 63.425 473 117 6 7 468 4 431 0.0 568
Msa0391270 MtrunA17_Chr1g0153451 52.677 467 211 6 7 468 4 465 1.99e-164 472
Msa0391270 MtrunA17_Chr8g0336741 51.288 466 216 6 9 468 13 473 3.68e-161 464
Msa0391270 MtrunA17_Chr7g0232331 50.213 470 219 9 7 467 4 467 2.06e-159 459
Msa0391270 MtrunA17_Chr8g0339601 67.868 333 98 3 144 468 1 332 2.95e-158 451
Msa0391270 MtrunA17_Chr8g0336731 52.079 457 208 6 18 468 41 492 7.19e-158 457
Msa0391270 MtrunA17_Chr7g0232411 50.533 469 220 7 7 468 4 467 1.12e-156 452
Msa0391270 MtrunA17_Chr7g0232391 50.533 469 220 7 7 468 4 467 4.85e-156 451
Msa0391270 MtrunA17_Chr8g0334851 48.832 471 227 8 8 468 5 471 1.22e-154 447
Msa0391270 MtrunA17_Chr7g0232341 49.364 472 222 9 7 468 4 468 5.71e-154 446
Msa0391270 MtrunA17_Chr6g0449931 48.945 474 228 9 3 468 2 469 1.27e-153 445
Msa0391270 MtrunA17_Chr8g0336651 52.119 472 211 8 7 468 779 1245 9.17e-152 463
Msa0391270 MtrunA17_Chr8g0336651 52.258 465 211 6 7 465 4 463 3.81e-150 459
Msa0391270 MtrunA17_Chr8g0336651 49.643 280 107 3 192 468 528 776 6.18e-76 258
Msa0391270 MtrunA17_Chr8g0336691 53.533 467 204 9 7 465 917 1378 1.71e-150 463
Msa0391270 MtrunA17_Chr8g0336691 50.964 467 216 6 7 465 11 472 6.37e-145 448
Msa0391270 MtrunA17_Chr8g0336691 49.138 464 201 6 7 465 478 911 4.90e-139 432
Msa0391270 MtrunA17_Chr7g0232311 50.321 467 218 7 3 463 2 460 1.33e-147 429
Msa0391270 MtrunA17_Chr8g0334861 47.537 467 227 11 8 465 5 462 1.79e-143 419
Msa0391270 MtrunA17_Chr6g0459311 46.667 465 235 8 10 467 14 472 6.57e-139 407
Msa0391270 MtrunA17_Chr7g0275511 44.726 474 241 7 4 465 10 474 9.71e-139 407
Msa0391270 MtrunA17_Chr6g0486251 46.452 465 236 8 10 467 7 465 2.05e-135 398
Msa0391270 MtrunA17_Chr6g0486201 46.452 465 236 8 10 467 7 465 2.05e-135 398
Msa0391270 MtrunA17_Chr8g0335161 45.781 474 234 12 8 468 5 468 1.24e-131 389
Msa0391270 MtrunA17_Chr8g0361371 44.468 470 243 7 10 467 8 471 6.71e-131 387
Msa0391270 MtrunA17_Chr8g0335141 45.106 470 238 10 10 468 10 470 1.25e-129 384
Msa0391270 MtrunA17_Chr8g0347281 42.918 466 249 9 10 468 19 474 5.34e-126 375
Msa0391270 MtrunA17_Chr8g0334831 43.006 479 246 8 10 467 7 479 4.27e-124 370
Msa0391270 MtrunA17_Chr8g0347271 42.424 462 245 9 16 468 26 475 1.80e-123 368
Msa0391270 MtrunA17_Chr7g0232351 52.105 380 171 7 7 380 4 378 2.17e-121 359
Msa0391270 MtrunA17_Chr8g0370941 37.143 490 268 16 5 463 5 485 1.18e-93 293
Msa0391270 MtrunA17_Chr1g0153461 58.962 212 85 1 259 468 3 214 4.69e-81 250
Msa0391270 MtrunA17_Chr6g0462531 35.043 468 273 13 19 469 14 467 1.13e-76 247
Msa0391270 MtrunA17_Chr5g0403641 34.316 475 258 13 9 463 59 499 1.18e-75 246
Msa0391270 MtrunA17_Chr6g0462521 33.917 457 265 9 20 463 15 447 8.21e-75 242
Msa0391270 MtrunA17_Chr6g0462571 33.333 465 282 14 20 470 15 465 1.10e-73 239
Msa0391270 MtrunA17_Chr3g0079731 37.466 371 215 7 107 462 108 476 5.47e-73 238
Msa0391270 MtrunA17_Chr6g0449991 40.653 337 166 9 9 335 6 318 9.63e-72 230
Msa0391270 MtrunA17_Chr6g0462551 35.021 474 265 20 20 470 15 468 1.69e-71 234
Msa0391270 MtrunA17_Chr6g0462541 35.422 367 211 5 107 463 110 460 5.23e-71 233
Msa0391270 MtrunA17_Chr5g0442541 31.799 478 283 16 8 462 4 461 3.56e-66 220
Msa0391270 MtrunA17_Chr5g0442491 31.884 483 285 16 8 462 4 470 9.67e-65 216
Msa0391270 MtrunA17_Chr5g0448521 31.158 475 288 13 10 462 6 463 1.54e-64 216
Msa0391270 MtrunA17_Chr5g0442581 31.717 495 272 19 8 462 4 472 1.78e-64 217
Msa0391270 MtrunA17_Chr5g0442601 32.927 492 270 22 8 462 403 871 5.18e-61 214
Msa0391270 MtrunA17_Chr5g0442601 34.211 304 152 8 114 403 64 333 1.78e-43 164
Msa0391270 MtrunA17_Chr5g0442561 31.006 487 282 19 8 462 4 468 1.75e-60 205
Msa0391270 MtrunA17_Chr5g0442521 30.081 492 283 16 8 462 4 471 1.91e-60 205
Msa0391270 MtrunA17_Chr5g0429711 29.959 484 288 17 1 462 3 457 2.34e-60 204
Msa0391270 MtrunA17_Chr5g0429681 29.472 492 285 20 1 462 36 495 2.45e-57 197
Msa0391270 MtrunA17_Chr2g0302991 29.684 475 290 15 10 462 6 458 6.29e-57 195
Msa0391270 MtrunA17_Chr2g0302961 28.986 483 286 17 10 462 6 461 1.68e-56 194
Msa0391270 MtrunA17_Chr4g0053501 30.398 477 298 12 1 462 3 460 1.94e-56 195
Msa0391270 MtrunA17_Chr5g0442511 29.375 480 276 18 8 462 48 489 2.27e-55 192
Msa0391270 MtrunA17_Chr4g0050341 30.255 509 283 23 1 467 13 491 2.28e-53 186
Msa0391270 MtrunA17_Chr4g0053321 30.228 483 291 13 1 462 18 475 2.68e-53 186
Msa0391270 MtrunA17_Chr5g0414331 30.372 484 260 16 9 462 13 449 2.94e-53 186
Msa0391270 MtrunA17_Chr3g0092641 31.062 499 278 21 1 462 4 473 6.96e-53 185
Msa0391270 MtrunA17_Chr6g0464921 27.664 488 282 12 5 463 7 452 9.98e-53 184
Msa0391270 MtrunA17_Chr7g0265141 30.837 454 241 16 44 465 71 483 1.05e-52 184
Msa0391270 MtrunA17_Chr8g0359821 29.116 498 289 18 1 462 4 473 3.75e-52 183
Msa0391270 MtrunA17_Chr6g0464841 29.979 487 267 18 7 463 9 451 6.65e-52 182
Msa0391270 MtrunA17_Chr5g0426431 29.577 497 282 18 4 462 7 473 9.31e-51 179
Msa0391270 MtrunA17_Chr4g0044511 32.637 383 212 13 114 470 146 508 1.74e-50 179
Msa0391270 MtrunA17_Chr1g0173121 38.519 270 146 6 196 455 192 451 2.10e-50 178
Msa0391270 MtrunA17_Chr5g0414321 28.629 496 272 14 9 471 11 457 2.78e-50 177
Msa0391270 MtrunA17_Chr3g0112771 33.780 373 222 8 97 462 93 447 5.06e-50 177
Msa0391270 MtrunA17_Chr6g0464881 29.793 386 205 9 106 463 104 451 2.36e-49 175
Msa0391270 MtrunA17_Chr4g0072771 28.294 463 297 10 9 462 25 461 2.55e-49 175
Msa0391270 MtrunA17_Chr6g0464871 29.193 483 272 17 8 462 22 462 5.85e-49 174
Msa0391270 MtrunA17_Chr3g0118671 28.189 486 295 14 9 462 6 469 8.54e-49 174
Msa0391270 MtrunA17_Chr8g0366391 29.801 453 252 14 41 468 68 479 1.19e-48 174
Msa0391270 MtrunA17_Chr7g0265051 30.952 504 278 18 1 460 1 478 1.45e-48 174
Msa0391270 MtrunA17_Chr4g0066221 35.873 315 163 10 171 462 178 476 2.56e-48 173
Msa0391270 MtrunA17_Chr3g0078841 31.266 387 218 12 106 466 113 477 6.41e-48 171
Msa0391270 MtrunA17_Chr4g0072761 30.541 370 231 6 96 462 102 448 8.09e-48 171
Msa0391270 MtrunA17_Chr6g0463861 33.333 315 171 9 171 462 171 469 9.34e-48 171
Msa0391270 MtrunA17_Chr6g0454151 31.830 377 208 13 111 462 121 473 2.04e-47 170
Msa0391270 MtrunA17_Chr7g0265151 34.540 359 188 11 126 455 132 472 2.05e-47 170
Msa0391270 MtrunA17_Chr4g0066151 35.379 277 149 8 209 462 206 475 3.95e-47 169
Msa0391270 MtrunA17_Chr3g0098111 30.250 400 233 10 83 462 92 465 3.99e-47 169
Msa0391270 MtrunA17_Chr6g0464861 31.250 384 200 12 106 462 103 449 4.63e-47 169
Msa0391270 MtrunA17_Chr3g0118771 27.572 486 284 13 9 455 21 477 5.63e-47 169
Msa0391270 MtrunA17_Chr7g0217881 30.749 374 200 12 111 462 121 457 6.09e-47 169
Msa0391270 MtrunA17_Chr4g0014061 36.140 285 143 8 209 468 204 474 6.26e-47 169
Msa0391270 MtrunA17_Chr5g0419761 31.807 393 226 13 97 462 104 481 6.30e-47 169
Msa0391270 MtrunA17_Chr7g0265101 32.323 396 224 12 93 460 101 480 6.75e-47 169
Msa0391270 MtrunA17_Chr4g0032331 34.605 367 196 13 112 463 109 446 9.04e-47 168
Msa0391270 MtrunA17_Chr8g0337381 59.690 129 50 1 340 468 1 127 1.35e-46 157
Msa0391270 MtrunA17_Chr3g0118691 30.366 382 222 10 106 462 116 478 1.42e-46 168
Msa0391270 MtrunA17_Chr6g0454261 28.770 504 281 20 3 462 6 475 1.47e-46 168
Msa0391270 MtrunA17_Chr4g0011051 33.158 380 201 14 109 455 117 476 2.16e-46 168
Msa0391270 MtrunA17_Chr1g0159551 30.709 381 219 11 94 455 94 448 2.63e-46 167
Msa0391270 MtrunA17_Chr6g0454121 30.120 415 239 14 77 462 82 474 3.53e-46 167
Msa0391270 MtrunA17_Chr6g0453961 28.427 496 292 17 5 462 15 485 3.57e-46 167
Msa0391270 MtrunA17_Chr6g0454401 30.303 396 223 14 97 462 104 476 4.01e-46 167
Msa0391270 MtrunA17_Chr4g0044521 31.830 377 207 12 114 462 108 462 4.31e-46 166
Msa0391270 MtrunA17_Chr8g0369341 28.966 435 267 11 51 462 49 464 5.16e-46 166
Msa0391270 MtrunA17_Chr2g0294941 36.299 281 143 9 194 452 99 365 5.17e-46 164
Msa0391270 MtrunA17_Chr6g0454131 30.193 414 240 13 77 462 82 474 5.28e-46 166
Msa0391270 MtrunA17_Chr5g0420801 28.361 476 307 14 1 463 1 455 7.93e-46 166
Msa0391270 MtrunA17_Chr3g0079711 43.915 189 101 2 286 469 3 191 9.36e-46 157
Msa0391270 MtrunA17_Chr6g0454191 30.576 399 218 15 97 462 104 476 1.36e-45 165
Msa0391270 MtrunA17_Chr4g0066131 35.018 277 150 8 209 462 201 470 1.62e-45 165
Msa0391270 MtrunA17_Chr6g0453951 29.695 394 228 13 97 462 150 522 1.89e-45 166
Msa0391270 MtrunA17_Chr8g0339611 69.355 124 37 1 8 130 5 128 1.98e-45 154
Msa0391270 MtrunA17_Chr6g0454331 27.921 505 290 20 1 462 1 474 2.09e-45 165
Msa0391270 MtrunA17_Chr6g0454141 30.315 508 272 23 1 462 4 475 2.54e-45 164
Msa0391270 MtrunA17_Chr8g0380531 29.765 383 219 9 106 467 105 458 2.63e-45 164
Msa0391270 MtrunA17_Chr8g0382021 35.870 276 156 7 199 462 218 484 6.49e-45 164
Msa0391270 MtrunA17_Chr8g0374941 37.801 291 149 10 195 462 1132 1413 7.65e-45 168
Msa0391270 MtrunA17_Chr8g0374941 33.065 372 190 17 112 451 120 464 3.26e-42 160
Msa0391270 MtrunA17_Chr8g0374941 35.526 304 155 12 171 451 642 927 2.97e-38 149
Msa0391270 MtrunA17_Chr7g0243871 36.877 301 151 11 185 468 196 474 1.09e-44 163
Msa0391270 MtrunA17_Chr3g0118721 33.108 296 156 8 182 462 17 285 1.09e-44 158
Msa0391270 MtrunA17_Chr5g0423981 28.454 485 270 17 5 462 6 440 1.42e-44 162
Msa0391270 MtrunA17_Chr5g0426401 34.528 307 165 10 172 462 20 306 1.45e-44 158
Msa0391270 MtrunA17_Chr3g0118711 28.904 429 236 13 72 462 79 476 1.56e-44 162
Msa0391270 MtrunA17_Chr5g0393591 29.781 366 208 10 98 459 108 428 1.71e-44 162
Msa0391270 MtrunA17_Chr7g0265041 37.195 328 162 13 172 471 185 496 1.98e-44 162
Msa0391270 MtrunA17_Chr8g0374901 34.225 374 203 13 112 462 121 474 2.06e-44 162
Msa0391270 MtrunA17_Chr3g0112761 27.846 492 290 18 1 468 1 451 2.22e-44 161
Msa0391270 MtrunA17_Chr8g0374971 34.768 302 159 9 184 462 190 476 2.29e-44 162
Msa0391270 MtrunA17_Chr6g0454181 29.798 396 225 14 97 462 103 475 2.40e-44 162
Msa0391270 MtrunA17_Chr7g0243681 35.714 322 162 10 172 468 180 481 3.12e-44 162
Msa0391270 MtrunA17_Chr2g0278711 27.859 481 288 15 18 463 17 473 3.64e-44 161
Msa0391270 MtrunA17_Chr6g0454301 29.084 502 284 21 1 462 257 726 4.66e-44 164
Msa0391270 MtrunA17_Chr6g0454301 34.632 231 128 6 233 462 17 225 4.87e-34 135
Msa0391270 MtrunA17_Chr3g0118701 27.338 417 258 9 72 462 81 478 5.40e-44 161
Msa0391270 MtrunA17_Chr6g0454321 29.630 405 227 13 76 442 69 453 6.16e-44 163
Msa0391270 MtrunA17_Chr6g0454291 29.695 394 228 13 97 462 100 472 6.47e-44 160
Msa0391270 MtrunA17_Chr1g0207981 29.459 370 220 10 112 463 123 469 9.46e-44 160
Msa0391270 MtrunA17_Chr6g0463851 30.809 383 216 12 111 463 116 479 1.04e-43 160
Msa0391270 MtrunA17_Chr7g0249931 28.919 370 209 11 112 459 139 476 1.48e-43 160
Msa0391270 MtrunA17_Chr7g0243781 36.774 310 142 11 185 468 196 477 1.64e-43 160
Msa0391270 MtrunA17_Chr7g0275681 32.425 367 202 11 114 455 124 469 2.51e-43 159
Msa0391270 MtrunA17_Chr4g0044501 31.351 370 215 11 114 462 120 471 3.00e-43 159
Msa0391270 MtrunA17_Chr7g0243631 36.086 327 159 11 172 468 182 488 3.16e-43 159
Msa0391270 MtrunA17_Chr1g0207931 33.700 273 154 6 203 462 235 493 5.20e-43 159
Msa0391270 MtrunA17_Chr4g0066261 35.379 277 148 10 209 462 209 477 6.64e-43 158
Msa0391270 MtrunA17_Chr6g0454211 29.695 394 228 13 97 462 390 762 6.69e-43 161
Msa0391270 MtrunA17_Chr6g0454211 29.555 247 105 11 152 380 41 236 3.74e-19 90.9
Msa0391270 MtrunA17_Chr1g0207951 31.034 377 210 11 106 462 220 566 6.80e-43 162
Msa0391270 MtrunA17_Chr1g0207951 30.729 384 198 13 108 462 760 1104 6.74e-42 159
Msa0391270 MtrunA17_Chr5g0440421 29.480 519 274 20 2 462 5 489 9.95e-43 157
Msa0391270 MtrunA17_Chr1g0161351 31.099 373 219 11 108 462 141 493 1.08e-42 158
Msa0391270 MtrunA17_Chr7g0243771 37.458 299 148 10 192 468 196 477 1.27e-42 157
Msa0391270 MtrunA17_Chr6g0454201 32.622 328 181 11 152 462 172 476 1.27e-42 157
Msa0391270 MtrunA17_Chr8g0361411 27.743 483 289 14 4 462 3 449 1.29e-42 157
Msa0391270 MtrunA17_Chr2g0294931 34.713 314 167 10 171 462 180 477 1.37e-42 157
Msa0391270 MtrunA17_Chr6g0454341 27.689 502 291 18 1 462 4 473 1.95e-42 157
Msa0391270 MtrunA17_Chr6g0454361 30.227 397 222 14 97 462 104 476 2.05e-42 157
Msa0391270 MtrunA17_Chr7g0243801 37.458 299 148 10 192 468 197 478 2.09e-42 157
Msa0391270 MtrunA17_Chr7g0249981 27.651 481 272 17 9 459 25 459 3.14e-42 156
Msa0391270 MtrunA17_Chr7g0218311 37.091 275 145 9 209 462 212 479 5.59e-42 155
Msa0391270 MtrunA17_Chr5g0431441 29.350 477 267 15 9 455 18 454 6.28e-42 155
Msa0391270 MtrunA17_Chr1g0207861 29.867 375 225 11 106 462 110 464 7.99e-42 155
Msa0391270 MtrunA17_Chr8g0350881 32.011 378 208 14 112 462 121 476 8.40e-42 155
Msa0391270 MtrunA17_Chr6g0452771 29.188 394 230 13 97 462 103 475 1.06e-41 154
Msa0391270 MtrunA17_Chr8g0365811 30.077 389 224 11 108 471 597 962 1.79e-41 158
Msa0391270 MtrunA17_Chr8g0365811 33.071 254 143 7 199 437 205 446 1.26e-36 144
Msa0391270 MtrunA17_Chr6g0454271 32.852 277 150 9 181 442 7 262 2.02e-41 149
Msa0391270 MtrunA17_Chr8g0374931 35.231 281 146 10 197 455 204 470 2.50e-41 154
Msa0391270 MtrunA17_Chr2g0294921 35.507 276 149 8 209 462 358 626 2.70e-41 156
Msa0391270 MtrunA17_Chr5g0412111 31.967 366 200 15 120 462 118 457 2.77e-41 153
Msa0391270 MtrunA17_Chr7g0235051 36.306 314 157 11 172 459 150 446 3.14e-41 153
Msa0391270 MtrunA17_Chr4g0066281 34.432 273 149 8 211 462 199 462 5.27e-41 152
Msa0391270 MtrunA17_Chr1g0207971 30.469 384 204 13 106 462 102 449 6.75e-41 152
Msa0391270 MtrunA17_Chr8g0336331 29.504 383 222 13 106 462 112 472 8.07e-41 152
Msa0391270 MtrunA17_Chr1g0179901 27.928 444 249 14 44 455 78 482 7.31e-40 150
Msa0391270 MtrunA17_Chr2g0329111 28.230 418 260 13 70 462 73 475 7.37e-40 150
Msa0391270 MtrunA17_Chr4g0042891 29.972 357 227 10 126 470 124 469 9.46e-40 149
Msa0391270 MtrunA17_Chr4g0060511 35.390 308 147 11 192 468 203 489 1.06e-39 149
Msa0391270 MtrunA17_Chr7g0243931 40.179 224 112 5 260 471 282 495 1.07e-39 149
Msa0391270 MtrunA17_Chr6g0454221 36.916 214 119 5 250 462 28 226 1.08e-39 145
Msa0391270 MtrunA17_Chr5g0428081 32.986 288 157 7 197 462 202 475 1.19e-39 149
Msa0391270 MtrunA17_Chr7g0218811 26.923 468 291 16 9 462 15 445 1.36e-39 148
Msa0391270 MtrunA17_Chr7g0243711 39.556 225 114 5 256 468 104 318 1.46e-39 145
Msa0391270 MtrunA17_Chr4g0044481 37.900 219 109 6 199 405 196 399 1.52e-39 147
Msa0391270 MtrunA17_Chr5g0401721 27.913 369 225 13 114 462 119 466 2.90e-39 148
Msa0391270 MtrunA17_Chr8g0355221 31.347 386 211 14 115 468 125 488 4.72e-39 147
Msa0391270 MtrunA17_Chr7g0218831 27.919 394 239 15 80 462 76 435 6.11e-39 146
Msa0391270 MtrunA17_Chr5g0419771 33.564 289 154 8 200 462 232 508 6.46e-39 147
Msa0391270 MtrunA17_Chr3g0118661 26.613 496 289 17 9 462 13 475 9.64e-39 146
Msa0391270 MtrunA17_Chr4g0042931 28.982 383 250 10 101 471 96 468 1.06e-38 146
Msa0391270 MtrunA17_Chr2g0307961 29.561 433 251 16 57 462 59 464 1.97e-38 145
Msa0391270 MtrunA17_Chr4g0066201 30.263 380 205 12 112 462 122 470 3.44e-38 145
Msa0391270 MtrunA17_Chr7g0218791 26.464 461 271 17 9 441 5 425 3.56e-38 144
Msa0391270 MtrunA17_Chr7g0218841 27.919 394 240 14 80 462 76 436 9.00e-38 143
Msa0391270 MtrunA17_Chr7g0250001 27.532 385 237 10 95 463 86 444 9.57e-38 143
Msa0391270 MtrunA17_Chr8g0334841 50.704 142 65 4 172 311 1 139 2.60e-37 134
Msa0391270 MtrunA17_Chr5g0448551 31.967 366 199 13 94 438 89 425 3.72e-37 142
Msa0391270 MtrunA17_Chr7g0249961 39.109 202 105 5 259 459 68 252 3.82e-37 137
Msa0391270 MtrunA17_Chr6g0454171 33.333 267 133 8 209 462 71 305 4.26e-37 138
Msa0391270 MtrunA17_Chr4g0066171 32.593 270 158 6 211 462 209 472 7.87e-37 141
Msa0391270 MtrunA17_Chr7g0218821 27.041 392 239 14 80 459 87 443 9.11e-37 140
Msa0391270 MtrunA17_Chr6g0482061 28.190 337 221 10 125 448 137 465 9.50e-37 141
Msa0391270 MtrunA17_Chr7g0243861 40.271 221 110 5 260 468 279 489 1.50e-36 140
Msa0391270 MtrunA17_Chr1g0165701 28.795 448 247 16 62 468 69 485 1.57e-36 140
Msa0391270 MtrunA17_Chr7g0243911 40.385 208 102 5 256 451 18 215 1.68e-36 134
Msa0391270 MtrunA17_Chr5g0410941 28.609 381 228 12 109 462 122 485 2.00e-36 140
Msa0391270 MtrunA17_Chr1g0207831 30.314 287 163 6 199 470 203 467 3.79e-36 139
Msa0391270 MtrunA17_Chr7g0241781 33.984 256 144 6 190 441 170 404 3.88e-36 138
Msa0391270 MtrunA17_Chr7g0243761 33.887 301 144 10 172 442 180 455 4.49e-36 139
Msa0391270 MtrunA17_Chr7g0243611 37.786 262 126 10 183 425 52 295 8.02e-36 134
Msa0391270 MtrunA17_Chr5g0412131 30.000 380 207 13 120 470 124 473 9.58e-36 138
Msa0391270 MtrunA17_Chr7g0243951 38.009 221 114 5 260 468 276 485 1.53e-35 138
Msa0391270 MtrunA17_Chr5g0409591 40.323 186 102 3 252 430 267 450 1.61e-35 137
Msa0391270 MtrunA17_Chr7g0243851 39.367 221 112 6 260 468 234 444 1.69e-35 137
Msa0391270 MtrunA17_Chr5g0412101 29.730 370 206 13 120 462 124 466 2.25e-35 137
Msa0391270 MtrunA17_Chr3g0121991 28.457 376 227 11 111 459 178 538 4.64e-35 137
Msa0391270 MtrunA17_Chr4g0029151 34.109 258 158 4 212 468 219 465 8.37e-35 135
Msa0391270 MtrunA17_Chr8g0355011 28.986 345 180 11 111 442 45 337 9.61e-35 133
Msa0391270 MtrunA17_Chr8g0377921 27.383 493 274 17 10 459 5 456 1.10e-34 135
Msa0391270 MtrunA17_Chr6g0454351 27.273 385 232 13 97 462 105 460 1.26e-34 135
Msa0391270 MtrunA17_Chr3g0118751 25.407 492 268 14 3 455 2 433 1.41e-34 134
Msa0391270 MtrunA17_Chr8g0377941 32.959 267 149 8 212 470 221 465 4.21e-34 133
Msa0391270 MtrunA17_Chr7g0265111 26.815 496 284 17 1 462 61 511 8.43e-34 133
Msa0391270 MtrunA17_Chr1g0196851 35.565 239 140 5 194 431 236 461 9.55e-34 133
Msa0391270 MtrunA17_Chr6g0454251 28.436 422 232 18 1 380 1 394 1.20e-33 130
Msa0391270 MtrunA17_Chr2g0278721 29.565 460 273 18 9 441 517 952 1.41e-33 134
Msa0391270 MtrunA17_Chr2g0278721 34.979 243 136 8 206 441 214 441 1.30e-28 119
Msa0391270 MtrunA17_Chr7g0243811 38.596 228 106 8 188 405 174 377 1.62e-33 130
Msa0391270 MtrunA17_Chr5g0431361 27.066 484 273 17 9 460 12 447 1.88e-33 131
Msa0391270 MtrunA17_Chr5g0427571 41.451 193 101 4 249 440 92 273 2.87e-33 127
Msa0391270 MtrunA17_Chr5g0401851 26.995 426 254 14 74 468 86 485 3.42e-33 131
Msa0391270 MtrunA17_Chr5g0432731 29.866 298 171 7 172 455 12 285 5.55e-33 127
Msa0391270 MtrunA17_Chr3g0106231 26.458 480 267 19 8 456 17 441 7.50e-33 130
Msa0391270 MtrunA17_Chr5g0431421 26.316 475 289 16 9 462 10 444 1.09e-32 129
Msa0391270 MtrunA17_Chr4g0029131 32.472 271 171 4 201 470 200 459 1.67e-32 130
Msa0391270 MtrunA17_Chr2g0283041 33.878 245 148 5 201 444 201 432 1.74e-32 129
Msa0391270 MtrunA17_Chr3g0122001 26.273 491 298 17 9 462 6 469 2.28e-32 131
Msa0391270 MtrunA17_Chr3g0122001 26.403 481 309 15 9 462 486 948 2.32e-32 131
Msa0391270 MtrunA17_Chr5g0416741 27.297 381 231 10 115 468 124 485 2.51e-32 129
Msa0391270 MtrunA17_Chr5g0431401 25.263 475 294 15 9 462 10 444 2.83e-32 128
Msa0391270 MtrunA17_Chr4g0069611 34.387 253 140 7 198 441 201 436 4.88e-32 127
Msa0391270 MtrunA17_Chr8g0367221 33.712 264 157 5 209 467 1495 1745 5.69e-32 130
Msa0391270 MtrunA17_Chr8g0367221 33.333 261 150 7 190 442 986 1230 6.16e-31 127
Msa0391270 MtrunA17_Chr8g0367221 32.824 262 152 7 209 462 218 463 4.38e-28 118
Msa0391270 MtrunA17_Chr8g0336321 41.667 180 95 3 261 440 270 439 1.34e-31 126
Msa0391270 MtrunA17_Chr6g0463891 34.649 228 130 3 251 468 268 486 2.11e-31 126
Msa0391270 MtrunA17_Chr7g0241801 36.275 204 110 4 240 441 219 404 8.55e-31 123
Msa0391270 MtrunA17_Chr8g0336251 41.111 180 96 3 261 440 270 439 1.79e-30 123
Msa0391270 MtrunA17_Chr3g0106251 33.205 259 136 9 209 455 49 282 1.69e-29 117
Msa0391270 MtrunA17_Chr5g0431371 27.506 389 233 11 87 460 88 442 2.25e-29 119
Msa0391270 MtrunA17_Chr6g0466831 28.166 458 268 17 9 441 18 439 1.05e-28 118
Msa0391270 MtrunA17_Chr5g0442501 27.848 316 199 11 8 308 4 305 4.15e-28 114
Msa0391270 MtrunA17_Chr4g0066141 40.606 165 86 4 316 468 189 353 5.73e-28 114
Msa0391270 MtrunA17_Chr4g0040691 30.738 244 154 3 201 442 202 432 1.02e-27 115
Msa0391270 MtrunA17_Chr2g0278741 29.268 410 256 15 46 441 134 523 1.08e-27 116
Msa0391270 MtrunA17_Chr6g0466841 27.948 458 269 17 9 441 18 439 1.22e-27 115
Msa0391270 MtrunA17_Chr3g0092031 36.464 181 101 4 262 441 6 173 4.22e-27 108
Msa0391270 MtrunA17_Chr4g0039881 33.708 267 150 9 185 442 166 414 5.81e-27 112
Msa0391270 MtrunA17_Chr8g0357361 34.483 203 111 5 211 405 63 251 1.71e-26 108
Msa0391270 MtrunA17_Chr4g0040711 27.692 325 210 6 115 430 112 420 3.27e-26 110
Msa0391270 MtrunA17_Chr2g0302851 34.413 247 136 8 204 441 208 437 3.97e-26 110
Msa0391270 MtrunA17_Chr6g0464091 28.054 442 275 17 1 423 11 428 5.43e-26 110
Msa0391270 MtrunA17_Chr8g0336261 37.162 148 78 4 282 429 1 133 5.97e-26 102
Msa0391270 MtrunA17_Chr6g0454371 33.149 181 106 4 282 462 1 166 1.59e-25 102
Msa0391270 MtrunA17_Chr5g0416821 31.469 286 137 10 211 468 221 475 3.36e-25 108
Msa0391270 MtrunA17_Chr6g0454231 28.846 260 116 6 209 456 5 207 1.42e-24 106
Msa0391270 MtrunA17_Chr7g0231631 32.479 234 121 6 244 468 56 261 2.78e-23 99.4
Msa0391270 MtrunA17_Chr5g0431431 30.116 259 142 7 172 422 116 343 5.49e-22 97.1
Msa0391270 MtrunA17_Chr1g0207881 37.405 131 79 2 334 462 251 380 1.67e-21 96.3
Msa0391270 MtrunA17_Chr5g0442551 29.084 251 143 10 111 350 68 294 2.13e-21 94.4
Msa0391270 MtrunA17_Chr2g0319731 33.761 234 138 6 207 438 225 443 2.30e-21 96.7
Msa0391270 MtrunA17_Chr2g0319791 27.027 333 196 9 126 439 123 427 3.52e-21 95.9
Msa0391270 MtrunA17_Chr6g0449971 55.696 79 35 0 390 468 1 79 3.66e-21 87.8
Msa0391270 MtrunA17_Chr2g0319761 33.058 242 141 8 207 442 208 434 4.95e-21 95.5
Msa0391270 MtrunA17_Chr2g0319801 29.706 340 198 8 115 438 112 426 5.17e-21 95.5
Msa0391270 MtrunA17_Chr4g0029161 29.104 268 150 5 204 470 203 431 2.06e-20 93.2
Msa0391270 MtrunA17_Chr2g0321331 30.472 233 107 7 207 438 57 235 2.81e-20 90.5
Msa0391270 MtrunA17_Chr7g0243731 48.052 77 40 0 334 410 2 78 2.81e-19 82.0
Msa0391270 MtrunA17_Chr3g0079721 31.694 183 114 6 107 280 108 288 1.15e-18 86.3
Msa0391270 MtrunA17_Chr2g0319751 33.663 202 121 5 240 439 714 904 4.47e-18 87.4
Msa0391270 MtrunA17_Chr2g0319751 26.238 202 112 5 240 439 237 403 9.94e-13 70.9
Msa0391270 MtrunA17_Chr7g0250021 26.991 226 138 6 112 321 111 325 6.35e-17 81.6
Msa0391270 MtrunA17_Chr6g0469961 30.769 169 105 5 141 302 1 164 7.69e-16 75.1
Msa0391270 MtrunA17_Chr6g0454391 45.455 66 32 1 357 422 13 74 3.24e-13 66.2
Msa0391270 MtrunA17_Chr6g0453981 27.184 206 120 8 125 306 5 204 9.79e-13 67.8
Msa0391270 MtrunA17_Chr6g0453941 28.859 149 88 4 172 306 113 257 2.56e-12 67.4
Msa0391270 MtrunA17_Chr6g0469951 35.632 87 52 2 379 462 1 86 9.06e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0391270 AT4G01070.1 44.050 479 253 9 1 471 1 472 6.91e-141 413
Msa0391270 AT1G01420.2 42.373 472 259 8 7 471 9 474 4.65e-134 396
Msa0391270 AT1G01420.1 42.373 472 259 8 7 471 6 471 4.91e-134 395
Msa0391270 AT1G01390.1 42.380 479 261 9 1 471 1 472 1.22e-126 377
Msa0391270 AT1G01390.2 42.380 479 261 9 1 471 18 489 2.25e-126 377
Msa0391270 AT2G18570.1 35.244 471 281 12 9 465 5 465 8.81e-90 281
Msa0391270 AT5G66690.1 34.698 464 284 9 1 455 1 454 3.49e-86 273
Msa0391270 AT3G50740.1 34.656 479 288 11 1 463 1 470 1.41e-83 266
Msa0391270 AT5G26310.1 34.409 465 286 10 1 456 1 455 1.92e-82 263
Msa0391270 AT4G01070.2 41.408 355 191 10 1 347 1 346 2.62e-82 258
Msa0391270 AT2G18560.1 39.683 378 211 8 96 465 7 375 5.84e-82 258
Msa0391270 AT4G36770.1 35.088 456 268 13 9 449 4 446 6.07e-82 261
Msa0391270 AT3G16520.3 35.829 374 222 7 93 462 96 455 7.42e-82 261
Msa0391270 AT3G16520.2 35.262 363 217 7 93 451 96 444 9.50e-79 252
Msa0391270 AT3G16520.1 35.262 363 217 7 93 451 96 444 1.30e-78 252
Msa0391270 AT1G07250.1 31.753 485 280 18 8 462 5 468 2.88e-68 226
Msa0391270 AT1G07260.1 32.106 489 278 18 5 462 2 467 1.60e-62 211
Msa0391270 AT2G29740.1 31.481 486 280 19 8 462 7 470 7.37e-60 204
Msa0391270 AT2G29750.1 30.228 483 289 18 8 462 7 469 2.28e-59 202
Msa0391270 AT2G31790.1 29.607 483 288 12 1 462 1 452 5.92e-59 201
Msa0391270 AT3G21760.1 33.787 367 223 6 108 459 112 473 7.49e-58 199
Msa0391270 AT3G21800.1 29.278 485 286 15 10 459 6 468 2.48e-57 197
Msa0391270 AT1G07240.1 30.943 488 278 19 7 458 3 467 2.10e-56 194
Msa0391270 AT3G21790.1 29.328 491 302 16 10 469 5 481 3.43e-56 194
Msa0391270 AT4G15260.1 32.320 362 213 11 120 462 2 350 1.31e-54 186
Msa0391270 AT4G15280.1 28.898 481 298 13 10 462 5 469 1.52e-54 189
Msa0391270 AT4G15280.2 28.898 481 298 13 10 462 37 501 2.25e-54 190
Msa0391270 AT3G21750.1 29.114 474 289 14 16 462 11 464 2.39e-54 189
Msa0391270 AT2G15490.1 33.422 374 212 9 109 462 120 476 2.75e-54 189
Msa0391270 AT2G15490.3 33.690 374 208 10 109 462 120 473 1.93e-53 187
Msa0391270 AT1G05680.1 29.278 485 274 14 8 463 5 449 3.64e-53 185
Msa0391270 AT4G34131.1 31.899 395 230 11 86 462 102 475 2.39e-52 184
Msa0391270 AT1G05675.1 28.092 477 290 11 8 463 5 449 2.73e-52 183
Msa0391270 AT3G21780.1 28.358 469 299 11 16 462 11 464 2.73e-52 184
Msa0391270 AT1G22400.1 30.602 415 236 13 72 456 79 471 3.37e-52 184
Msa0391270 AT2G16890.2 32.304 421 241 13 60 462 69 463 2.42e-51 181
Msa0391270 AT2G15480.1 32.075 371 218 9 109 462 123 476 7.12e-51 180
Msa0391270 AT2G31750.1 26.860 484 299 13 5 466 4 454 1.04e-50 179
Msa0391270 AT2G43820.1 29.532 491 266 14 9 468 7 448 1.33e-50 178
Msa0391270 AT2G31750.2 26.860 484 299 13 5 466 4 454 2.99e-50 178
Msa0391270 AT3G53150.1 33.333 411 214 12 93 462 114 505 3.28e-50 179
Msa0391270 AT1G10400.1 31.323 431 245 15 47 462 64 458 5.22e-50 177
Msa0391270 AT2G15480.2 32.021 381 215 11 109 462 123 486 9.29e-50 177
Msa0391270 AT5G14860.1 30.664 437 256 17 46 462 62 471 1.10e-49 177
Msa0391270 AT2G29730.1 26.767 467 302 13 16 462 12 458 3.31e-49 175
Msa0391270 AT2G36970.1 29.973 367 226 9 101 455 112 459 5.31e-49 175
Msa0391270 AT1G22360.1 28.921 491 271 18 9 455 10 466 5.44e-49 175
Msa0391270 AT4G34138.1 36.559 279 143 8 200 462 214 474 6.41e-49 175
Msa0391270 AT1G22340.1 31.387 411 227 15 82 462 92 477 8.13e-49 174
Msa0391270 AT3G53160.1 38.321 274 135 7 211 462 217 478 4.52e-48 172
Msa0391270 AT2G29710.1 26.763 482 301 16 7 462 3 458 1.50e-47 171
Msa0391270 AT5G03490.1 29.352 494 279 17 2 467 12 463 2.70e-47 170
Msa0391270 AT2G30140.2 30.462 476 269 16 9 463 13 447 1.22e-46 168
Msa0391270 AT1G73880.1 29.388 490 278 20 3 460 7 460 1.63e-46 168
Msa0391270 AT2G30140.1 30.085 472 277 15 9 463 13 448 2.38e-46 167
Msa0391270 AT4G34135.1 31.948 385 222 10 97 462 114 477 2.69e-46 167
Msa0391270 AT2G36760.1 36.940 268 133 7 211 455 223 477 3.99e-46 167
Msa0391270 AT2G36780.1 30.617 454 249 17 36 462 70 484 5.31e-46 167
Msa0391270 AT4G15480.1 30.769 377 222 13 108 466 123 478 8.37e-46 166
Msa0391270 AT2G36770.1 35.401 274 143 6 211 462 223 484 1.73e-45 166
Msa0391270 AT1G22380.1 28.974 497 273 23 3 455 9 469 1.77e-45 166
Msa0391270 AT2G43840.1 27.888 502 266 15 5 467 3 447 2.69e-45 164
Msa0391270 AT1G78270.1 29.126 412 237 12 72 455 79 463 3.64e-45 164
Msa0391270 AT2G16890.3 32.361 377 212 12 60 419 69 419 4.39e-45 163
Msa0391270 AT2G43840.2 27.888 502 266 15 5 467 3 447 6.82e-45 163
Msa0391270 AT1G51210.1 29.257 417 227 12 51 441 58 432 8.43e-45 162
Msa0391270 AT3G46700.1 30.548 383 234 9 96 468 86 446 1.20e-44 162
Msa0391270 AT1G24100.1 28.195 493 284 19 1 462 1 454 2.37e-44 162
Msa0391270 AT3G46650.1 31.818 374 217 10 93 462 89 428 3.95e-44 160
Msa0391270 AT2G36750.1 35.581 267 138 6 211 455 218 472 4.05e-44 162
Msa0391270 AT3G46680.1 30.729 384 225 9 93 462 89 445 7.68e-44 160
Msa0391270 AT2G28080.1 31.856 361 203 12 112 456 127 460 2.12e-43 159
Msa0391270 AT3G46690.1 30.982 397 233 12 79 462 77 445 2.37e-43 159
Msa0391270 AT2G36800.1 31.165 369 201 11 126 462 136 483 3.45e-43 159
Msa0391270 AT1G22370.2 29.167 480 264 18 9 448 13 456 4.62e-43 159
Msa0391270 AT1G22360.2 28.333 480 267 18 9 446 10 454 4.72e-43 158
Msa0391270 AT5G17050.1 27.778 486 289 17 4 462 2 452 5.19e-43 158
Msa0391270 AT5G59590.1 31.675 382 227 10 96 466 91 449 1.98e-42 156
Msa0391270 AT5G59580.1 31.316 380 222 12 96 462 90 443 4.46e-42 155
Msa0391270 AT3G46670.1 28.395 486 294 14 1 468 1 450 3.80e-41 153
Msa0391270 AT4G15490.1 28.075 374 230 13 111 466 114 466 3.83e-40 150
Msa0391270 AT3G46660.1 31.414 382 221 11 96 462 96 451 4.29e-40 150
Msa0391270 AT5G05880.1 31.014 345 207 10 127 462 122 444 8.21e-40 149
Msa0391270 AT3G21560.1 28.150 373 230 11 111 466 121 472 1.10e-39 150
Msa0391270 AT5G38040.1 31.117 376 229 9 96 462 91 445 2.69e-39 148
Msa0391270 AT3G11340.1 28.243 478 283 14 3 462 5 440 2.76e-39 147
Msa0391270 AT3G55710.1 30.518 367 217 13 112 463 108 451 3.65e-39 147
Msa0391270 AT5G05870.1 30.334 389 229 10 97 466 89 454 7.75e-39 147
Msa0391270 AT4G15500.1 28.747 407 253 12 73 466 80 462 1.19e-38 146
Msa0391270 AT2G36790.1 35.206 267 139 6 211 455 222 476 1.23e-38 147
Msa0391270 AT3G55700.1 27.699 491 278 19 3 462 2 446 2.62e-38 145
Msa0391270 AT4G14090.1 28.571 364 221 12 105 455 107 444 1.21e-37 143
Msa0391270 AT5G12890.1 28.485 495 303 20 1 462 1 477 1.46e-37 144
Msa0391270 AT1G05560.1 27.079 469 295 15 9 459 5 444 2.32e-37 143
Msa0391270 AT1G30530.1 29.396 364 230 8 97 455 98 439 2.96e-37 142
Msa0391270 AT1G22370.1 35.227 264 136 8 200 448 43 286 3.24e-37 139
Msa0391270 AT1G05560.2 27.079 469 295 15 9 459 55 494 3.94e-37 143
Msa0391270 AT2G30150.2 28.390 472 270 16 9 455 13 441 1.41e-36 140
Msa0391270 AT5G38010.1 29.508 366 216 10 112 462 111 449 3.84e-36 139
Msa0391270 AT2G26480.1 31.458 391 220 15 101 467 82 448 5.47e-36 139
Msa0391270 AT5G05860.1 33.555 301 169 9 172 463 166 444 7.01e-36 138
Msa0391270 AT3G02100.1 26.176 489 292 17 9 468 13 461 4.79e-35 136
Msa0391270 AT2G30150.1 28.387 465 265 16 16 455 4 425 5.11e-35 135
Msa0391270 AT2G23260.1 25.873 487 279 13 8 460 9 447 6.04e-35 136
Msa0391270 AT3G46720.1 34.746 236 130 4 240 471 230 445 6.66e-35 135
Msa0391270 AT1G06000.1 30.137 292 174 7 185 466 162 433 1.07e-34 135
Msa0391270 AT1G05530.1 28.109 402 244 12 73 457 72 445 1.99e-34 134
Msa0391270 AT5G05900.1 30.503 318 184 9 150 462 158 443 2.76e-34 134
Msa0391270 AT4G15550.1 29.692 357 223 11 111 455 122 462 6.52e-33 130
Msa0391270 AT5G05890.1 32.841 271 157 7 197 462 198 448 1.94e-32 129
Msa0391270 AT2G23250.1 29.771 262 153 5 212 462 190 431 4.04e-32 127
Msa0391270 AT5G49690.1 35.833 240 126 7 209 442 214 431 5.67e-32 127
Msa0391270 AT5G65550.1 40.351 171 88 3 261 430 269 426 6.93e-32 127
Msa0391270 AT5G17040.1 26.452 465 285 16 8 455 4 428 8.95e-31 124
Msa0391270 AT5G17030.1 28.367 349 222 9 115 455 116 444 1.41e-30 124
Msa0391270 AT1G64910.1 26.591 440 255 15 38 468 59 439 3.07e-30 122
Msa0391270 AT3G22250.1 28.729 362 197 14 112 437 103 439 7.34e-30 121
Msa0391270 AT4G27570.1 28.955 335 209 8 120 448 116 427 2.70e-28 117
Msa0391270 AT2G22590.1 39.247 186 97 5 261 442 273 446 4.21e-28 117
Msa0391270 AT5G17040.2 27.900 319 191 9 149 455 35 326 5.54e-28 114
Msa0391270 AT5G53990.1 29.677 310 178 7 126 426 121 399 6.12e-28 116
Msa0391270 AT5G54010.1 29.524 315 190 8 120 426 115 405 1.78e-27 114
Msa0391270 AT5G37950.2 29.553 291 179 8 96 380 67 337 1.90e-27 112
Msa0391270 AT4G27560.1 29.358 327 200 9 120 440 116 417 3.05e-27 114
Msa0391270 AT5G37950.1 28.667 300 176 9 96 380 67 343 3.13e-27 112
Msa0391270 AT2G22930.1 28.076 317 186 7 120 426 115 399 4.52e-25 107
Msa0391270 AT1G50580.1 32.068 237 145 5 193 426 177 400 6.72e-25 107
Msa0391270 AT3G29630.1 31.496 254 145 6 185 434 180 408 3.95e-24 105
Msa0391270 AT4G09500.2 32.447 188 117 2 240 426 221 399 1.81e-22 100
Msa0391270 AT3G29630.2 36.207 174 99 3 262 434 220 382 2.02e-22 99.8
Msa0391270 AT4G09500.1 33.939 165 100 1 262 426 219 374 3.98e-22 98.6
Msa0391270 AT1G64920.1 29.876 241 153 5 233 468 214 443 4.95e-22 99.0
Msa0391270 AT5G54060.1 26.648 349 226 9 126 462 128 458 7.90e-22 98.2
Msa0391270 AT4G34135.2 28.261 230 142 8 97 313 114 333 8.63e-15 75.9
Msa0391270 AT2G16890.4 28.175 252 155 9 60 297 69 308 8.25e-13 69.7
Msa0391270 AT2G16890.1 28.175 252 155 9 60 297 69 308 8.25e-13 69.7

Find 108 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATCAATGAACTAGCTTT+AGG 0.227560 3_2:+2755395 Msa0391270:CDS
CGTTGAACCTATTCAAATTC+CGG 0.265580 3_2:+2755037 Msa0391270:CDS
AACTACTAACCCTTGTTCTT+TGG 0.272029 3_2:-2755543 None:intergenic
CCTAGTAATTCTGAAATTCT+AGG 0.279949 3_2:+2755461 Msa0391270:CDS
AAGTACAGTGAGAGCCTTAA+TGG 0.296312 3_2:+2755205 Msa0391270:CDS
ATACTTGATGAACAAGTTTC+GGG 0.298674 3_2:+2754999 Msa0391270:CDS
GGTAGGTCTTGTTTGTATAT+TGG 0.307752 3_2:-2754753 None:intergenic
AATACTTGATGAACAAGTTT+CGG 0.314869 3_2:+2754998 Msa0391270:CDS
GTGATTAGAGATTTAATGTT+TGG 0.339600 3_2:+2755800 Msa0391270:CDS
GAAGTTGTCATGGCAGAAAC+AGG 0.358033 3_2:-2754957 None:intergenic
GGGAGATCTTGGCCGCAAAT+AGG 0.373214 3_2:-2755068 None:intergenic
CCTTTAAAATACTTACCAAA+TGG 0.374386 3_2:+2755506 Msa0391270:CDS
GGGATAGGTGCATCAATGTT+GGG 0.378523 3_2:-2754672 None:intergenic
GTTGAACCTATTCAAATTCC+GGG 0.382395 3_2:+2755038 Msa0391270:CDS
ATGATAACTTGGCCGTTGTT+TGG 0.385601 3_2:+2755674 Msa0391270:CDS
GAAGAGATTCAAGTAATTTG+AGG 0.386713 3_2:-2754701 None:intergenic
CTTTAAAATACTTACCAAAT+GGG 0.393041 3_2:+2755507 Msa0391270:CDS
AGGTCTTGTTTGTATATTGG+AGG 0.406214 3_2:-2754750 None:intergenic
GACACATACAAAACAGACTT+TGG 0.408246 3_2:-2755341 None:intergenic
AGATCAATGAACTAGCTTTA+GGG 0.410921 3_2:+2755396 Msa0391270:CDS
ATCCTAAGCCACACTTCAAC+TGG 0.416531 3_2:+2755590 Msa0391270:CDS
GGGACTTAAGGTGGGTTTGA+AGG 0.416796 3_2:+2755730 Msa0391270:CDS
TCAAGTAATTTGAGGGTGGC+TGG 0.418346 3_2:-2754693 None:intergenic
GTTACCATGCAACTTGAACT+TGG 0.420464 3_2:+2754783 Msa0391270:CDS
ATACAACCCGGAATTTGAAT+AGG 0.422728 3_2:-2755044 None:intergenic
CTCAACGATTCGCGAAAAGA+TGG 0.422978 3_2:-2754822 None:intergenic
ACTCAATTACAGAAGATTGA+TGG 0.425291 3_2:-2754596 None:intergenic
GATTAATAGCTTCTCAGAAA+TGG 0.425786 3_2:+2755178 Msa0391270:CDS
CCTAGAATTTCAGAATTACT+AGG 0.425842 3_2:-2755461 None:intergenic
GTTCTCTCTAAGAACCCATT+TGG 0.426435 3_2:-2755521 None:intergenic
AAGAGATTCAAGTAATTTGA+GGG 0.427845 3_2:-2754700 None:intergenic
TCAACAACCATTGCTACAAC+CGG 0.428025 3_2:-2754870 None:intergenic
TGGGGAAGATGCAAGTGATA+TGG 0.430387 3_2:-2754653 None:intergenic
TTTGTTAATAGAGGGACTTA+AGG 0.431638 3_2:+2755718 Msa0391270:CDS
CTTTCGCTATTTCTAATGCT+TGG 0.431959 3_2:-2754905 None:intergenic
AAGTGATATGGAAGTGGTTA+TGG 0.433662 3_2:-2754641 None:intergenic
TTTGAACCTGTTTGTATGAT+CGG 0.435856 3_2:-2755272 None:intergenic
TTACCATGCAACTTGAACTT+GGG 0.438611 3_2:+2754784 Msa0391270:CDS
TCTAATGCTTGGTTTGCAAA+AGG 0.447295 3_2:-2754894 None:intergenic
CACCAGTTGAAGTGTGGCTT+AGG 0.449672 3_2:-2755592 None:intergenic
CAGGAGTGCCAATGATAACT+TGG 0.450840 3_2:+2755663 Msa0391270:CDS
AAGGTAAAATTTAATGAGAG+TGG 0.454964 3_2:+2755749 Msa0391270:CDS
GTTACTACTATATGACTAGT+TGG 0.458408 3_2:-2754555 None:intergenic
GAAGATTGATGGCTAAATAG+AGG 0.460467 3_2:-2754585 None:intergenic
GGTCTTGTTTGTATATTGGA+GGG 0.460931 3_2:-2754749 None:intergenic
TTCTCAACTTGCCATTCGAA+TGG 0.473407 3_2:+2755916 Msa0391270:CDS
TTCAAATGAGTTAAACGAAT+CGG 0.474983 3_2:+2755289 Msa0391270:CDS
CCGGGTTGTATACCTATTTG+CGG 0.478456 3_2:+2755056 Msa0391270:CDS
GAAACTTGTTCATCAAGTAT+TGG 0.484358 3_2:-2754996 None:intergenic
GAAAGTGCAGTGTATGGTTG+AGG 0.484747 3_2:-2754724 None:intergenic
TGGGATAGGTGCATCAATGT+TGG 0.485798 3_2:-2754673 None:intergenic
AAAGTGCAGTGTATGGTTGA+GGG 0.489197 3_2:-2754723 None:intergenic
AAACAATTAGTTTATCTCGT+TGG 0.491724 3_2:+2755248 Msa0391270:CDS
TGCATTGCTTTCCATTCGAA+TGG 0.494715 3_2:-2755927 None:intergenic
ACTGCTGCATTAGCAGAAGA+TGG 0.494827 3_2:+2755875 Msa0391270:CDS
ATGGCTAAATAGAGGGATTG+AGG 0.495293 3_2:-2754577 None:intergenic
TTAATAGAGGGACTTAAGGT+GGG 0.495573 3_2:+2755722 Msa0391270:CDS
GTTAATAGAGGGACTTAAGG+TGG 0.501548 3_2:+2755721 Msa0391270:CDS
ACAAGTTTCGGGTGAGTACA+TGG 0.503252 3_2:+2755010 Msa0391270:CDS
GCATGGTAACTTCTTGTGGT+AGG 0.506209 3_2:-2754770 None:intergenic
AACCACCCCGGTTGTAGCAA+TGG 0.507604 3_2:+2754863 Msa0391270:CDS
CAAGTAATTTGAGGGTGGCT+GGG 0.510158 3_2:-2754692 None:intergenic
AGTGAGAGCCTTAATGGAAA+AGG 0.512747 3_2:+2755211 Msa0391270:CDS
ACACTCGAGAGCATTGCGTC+AGG 0.513066 3_2:+2755644 Msa0391270:CDS
AATTTGAGGGTGGCTGGGAT+AGG 0.515661 3_2:-2754687 None:intergenic
AACAACGGCCAAGTTATCAT+TGG 0.521810 3_2:-2755671 None:intergenic
AGATGCAAGTGATATGGAAG+TGG 0.527260 3_2:-2754647 None:intergenic
GTTGGACCGATCATACAAAC+AGG 0.536958 3_2:+2755266 Msa0391270:CDS
CAACAACCATTGCTACAACC+GGG 0.541068 3_2:-2754869 None:intergenic
AGTTGCATGGTAACTTCTTG+TGG 0.544698 3_2:-2754774 None:intergenic
CAAATGTAGTGAAGTTGTCA+TGG 0.550054 3_2:-2754967 None:intergenic
CTTGTTTGTATATTGGAGGG+AGG 0.557810 3_2:-2754746 None:intergenic
CTGCCTACGAGACAATTCTT+CGG 0.558303 3_2:+2755120 Msa0391270:CDS
AGGGAGGAAAGTGCAGTGTA+TGG 0.564017 3_2:-2754730 None:intergenic
ATCGGTGTGTGTAAAGTGGT+TGG 0.569413 3_2:+2755307 Msa0391270:CDS
AACCCCAAGTTCAAGTTGCA+TGG 0.569524 3_2:-2754787 None:intergenic
AAGAGATTCTCTCTTGCTGA+TGG 0.571776 3_2:+2755149 Msa0391270:CDS
TATGTGTCCTTTGGAAGTAG+AGG 0.571896 3_2:+2755356 Msa0391270:CDS
CAGAAGATGGGTCTTCCACA+AGG 0.577521 3_2:+2755888 Msa0391270:CDS
ATCAGCAAGAGAGAATCTCT+TGG 0.580259 3_2:-2755147 None:intergenic
AAGATTGATGGCTAAATAGA+GGG 0.582273 3_2:-2754584 None:intergenic
CTGCTGCATTAGCAGAAGAT+GGG 0.587288 3_2:+2755876 Msa0391270:CDS
GAGTGGCATTGCAGAAAGAG+AGG 0.591006 3_2:+2755766 Msa0391270:CDS
TTAGAGAGAACCAAAGAACA+AGG 0.592709 3_2:+2755533 Msa0391270:CDS
TACCATGCAACTTGAACTTG+GGG 0.595847 3_2:+2754785 Msa0391270:CDS
GATTTCTAACACATTGTGGT+GGG 0.598707 3_2:+2755615 Msa0391270:CDS
TAATAGCTTCTCAGAAATGG+AGG 0.602742 3_2:+2755181 Msa0391270:CDS
GAAATCCACCAGTTGAAGTG+TGG 0.605066 3_2:-2755598 None:intergenic
GCTTTAGGGTTAGAGTTGAG+TGG 0.605558 3_2:+2755410 Msa0391270:CDS
TAAACTGCCTCTACTTCCAA+AGG 0.610687 3_2:-2755363 None:intergenic
CTAAGCCACACTTCAACTGG+TGG 0.611287 3_2:+2755593 Msa0391270:CDS
TTGCTCAACTTCAACCACCC+CGG 0.611682 3_2:+2754851 Msa0391270:CDS
AACAACCATTGCTACAACCG+GGG 0.614619 3_2:-2754868 None:intergenic
AATCTTTGCTCGCCAAACAA+CGG 0.615774 3_2:-2755686 None:intergenic
AGAAAGAGAGGAAATTGCTA+AGG 0.620095 3_2:+2755778 Msa0391270:CDS
GGATAGGTGCATCAATGTTG+GGG 0.625681 3_2:-2754671 None:intergenic
ACGAATCGGTGTGTGTAAAG+TGG 0.626568 3_2:+2755303 Msa0391270:CDS
TGGCTTAGGATTTGAGCCTG+TGG 0.634458 3_2:-2755578 None:intergenic
AAGTTGTCATGGCAGAAACA+GGG 0.637669 3_2:-2754956 None:intergenic
AGATTCAAGTAATTTGAGGG+TGG 0.643101 3_2:-2754697 None:intergenic
TTGCCGAAGAATTGTCTCGT+AGG 0.644588 3_2:-2755123 None:intergenic
GGATTTCTAACACATTGTGG+TGG 0.653830 3_2:+2755614 Msa0391270:CDS
TAGAGAGAACCAAAGAACAA+GGG 0.659135 3_2:+2755534 Msa0391270:CDS
CCGCAAATAGGTATACAACC+CGG 0.666583 3_2:-2755056 None:intergenic
AACCATTGCTACAACCGGGG+TGG 0.666740 3_2:-2754865 None:intergenic
AGAAGATGGGTCTTCCACAA+GGG 0.671254 3_2:+2755889 Msa0391270:CDS
GGTGGATTTCTAACACATTG+TGG 0.675261 3_2:+2755611 Msa0391270:CDS
AAGTTGAGAAAGTGCCCTTG+TGG 0.719458 3_2:-2755903 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTGGTAAGTATTTTAAA+GGG - chr3_2:2755508-2755527 None:intergenic 20.0%
!!! CTTTAAAATACTTACCAAAT+GGG + chr3_2:2755507-2755526 Msa0391270:CDS 20.0%
!!! AATGCTATTTTGTTAATAGA+GGG + chr3_2:2755710-2755729 Msa0391270:CDS 20.0%
!!! CATTTGGTAAGTATTTTAAA+GGG - chr3_2:2755508-2755527 None:intergenic 20.0%
!!! CTTTAAAATACTTACCAAAT+GGG + chr3_2:2755507-2755526 Msa0391270:CDS 20.0%
!!! AATGCTATTTTGTTAATAGA+GGG + chr3_2:2755710-2755729 Msa0391270:CDS 20.0%
! AAGAGATTCAAGTAATTTGA+GGG - chr3_2:2754703-2754722 None:intergenic 25.0%
! AATACTTGATGAACAAGTTT+CGG + chr3_2:2754998-2755017 Msa0391270:CDS 25.0%
!! AAACAATTAGTTTATCTCGT+TGG + chr3_2:2755248-2755267 Msa0391270:CDS 25.0%
! TTCAAATGAGTTAAACGAAT+CGG + chr3_2:2755289-2755308 Msa0391270:CDS 25.0%
!!! CCATTTGGTAAGTATTTTAA+AGG - chr3_2:2755509-2755528 None:intergenic 25.0%
!!! CCTTTAAAATACTTACCAAA+TGG + chr3_2:2755506-2755525 Msa0391270:CDS 25.0%
!!! GAATGCTATTTTGTTAATAG+AGG + chr3_2:2755709-2755728 Msa0391270:CDS 25.0%
! AAGGTAAAATTTAATGAGAG+TGG + chr3_2:2755749-2755768 Msa0391270:CDS 25.0%
! GTGATTAGAGATTTAATGTT+TGG + chr3_2:2755800-2755819 Msa0391270:CDS 25.0%
! AAGAGATTCAAGTAATTTGA+GGG - chr3_2:2754703-2754722 None:intergenic 25.0%
! AATACTTGATGAACAAGTTT+CGG + chr3_2:2754998-2755017 Msa0391270:CDS 25.0%
!! AAACAATTAGTTTATCTCGT+TGG + chr3_2:2755248-2755267 Msa0391270:CDS 25.0%
! TTCAAATGAGTTAAACGAAT+CGG + chr3_2:2755289-2755308 Msa0391270:CDS 25.0%
!!! CCATTTGGTAAGTATTTTAA+AGG - chr3_2:2755509-2755528 None:intergenic 25.0%
!!! CCTTTAAAATACTTACCAAA+TGG + chr3_2:2755506-2755525 Msa0391270:CDS 25.0%
!!! GAATGCTATTTTGTTAATAG+AGG + chr3_2:2755709-2755728 Msa0391270:CDS 25.0%
! AAGGTAAAATTTAATGAGAG+TGG + chr3_2:2755749-2755768 Msa0391270:CDS 25.0%
! GTGATTAGAGATTTAATGTT+TGG + chr3_2:2755800-2755819 Msa0391270:CDS 25.0%
!!! ATGACTAGTTGGTTTTGTTT+CGG - chr3_2:2754547-2754566 None:intergenic 30.0%
GTTACTACTATATGACTAGT+TGG - chr3_2:2754558-2754577 None:intergenic 30.0%
! AAGATTGATGGCTAAATAGA+GGG - chr3_2:2754587-2754606 None:intergenic 30.0%
ACTCAATTACAGAAGATTGA+TGG - chr3_2:2754599-2754618 None:intergenic 30.0%
GAAGAGATTCAAGTAATTTG+AGG - chr3_2:2754704-2754723 None:intergenic 30.0%
! GAAACTTGTTCATCAAGTAT+TGG - chr3_2:2754999-2755018 None:intergenic 30.0%
ATACTTGATGAACAAGTTTC+GGG + chr3_2:2754999-2755018 Msa0391270:CDS 30.0%
! GATCTTCAAAAAAAGTACGA+GGG - chr3_2:2755091-2755110 None:intergenic 30.0%
!!! CTCGTACTTTTTTTGAAGAT+CGG + chr3_2:2755090-2755109 Msa0391270:CDS 30.0%
GATTAATAGCTTCTCAGAAA+TGG + chr3_2:2755178-2755197 Msa0391270:CDS 30.0%
TTTGAACCTGTTTGTATGAT+CGG - chr3_2:2755275-2755294 None:intergenic 30.0%
!! AGATCAATGAACTAGCTTTA+GGG + chr3_2:2755396-2755415 Msa0391270:CDS 30.0%
CCTAGAATTTCAGAATTACT+AGG - chr3_2:2755464-2755483 None:intergenic 30.0%
!! CCTAGTAATTCTGAAATTCT+AGG + chr3_2:2755461-2755480 Msa0391270:CDS 30.0%
!! AAGGGTTAGTAGTTTCTTTT+TGG + chr3_2:2755552-2755571 Msa0391270:CDS 30.0%
!! AGGGTTAGTAGTTTCTTTTT+GGG + chr3_2:2755553-2755572 Msa0391270:CDS 30.0%
TTTGTTAATAGAGGGACTTA+AGG + chr3_2:2755718-2755737 Msa0391270:CDS 30.0%
!!! ATGACTAGTTGGTTTTGTTT+CGG - chr3_2:2754547-2754566 None:intergenic 30.0%
GTTACTACTATATGACTAGT+TGG - chr3_2:2754558-2754577 None:intergenic 30.0%
! AAGATTGATGGCTAAATAGA+GGG - chr3_2:2754587-2754606 None:intergenic 30.0%
ACTCAATTACAGAAGATTGA+TGG - chr3_2:2754599-2754618 None:intergenic 30.0%
GAAGAGATTCAAGTAATTTG+AGG - chr3_2:2754704-2754723 None:intergenic 30.0%
! GAAACTTGTTCATCAAGTAT+TGG - chr3_2:2754999-2755018 None:intergenic 30.0%
ATACTTGATGAACAAGTTTC+GGG + chr3_2:2754999-2755018 Msa0391270:CDS 30.0%
! GATCTTCAAAAAAAGTACGA+GGG - chr3_2:2755091-2755110 None:intergenic 30.0%
!!! CTCGTACTTTTTTTGAAGAT+CGG + chr3_2:2755090-2755109 Msa0391270:CDS 30.0%
GATTAATAGCTTCTCAGAAA+TGG + chr3_2:2755178-2755197 Msa0391270:CDS 30.0%
TTTGAACCTGTTTGTATGAT+CGG - chr3_2:2755275-2755294 None:intergenic 30.0%
!! AGATCAATGAACTAGCTTTA+GGG + chr3_2:2755396-2755415 Msa0391270:CDS 30.0%
CCTAGAATTTCAGAATTACT+AGG - chr3_2:2755464-2755483 None:intergenic 30.0%
!! CCTAGTAATTCTGAAATTCT+AGG + chr3_2:2755461-2755480 Msa0391270:CDS 30.0%
!! AAGGGTTAGTAGTTTCTTTT+TGG + chr3_2:2755552-2755571 Msa0391270:CDS 30.0%
!! AGGGTTAGTAGTTTCTTTTT+GGG + chr3_2:2755553-2755572 Msa0391270:CDS 30.0%
TTTGTTAATAGAGGGACTTA+AGG + chr3_2:2755718-2755737 Msa0391270:CDS 30.0%
! GAAGATTGATGGCTAAATAG+AGG - chr3_2:2754588-2754607 None:intergenic 35.0%
AAGTGATATGGAAGTGGTTA+TGG - chr3_2:2754644-2754663 None:intergenic 35.0%
AGATTCAAGTAATTTGAGGG+TGG - chr3_2:2754700-2754719 None:intergenic 35.0%
!! GGTCTTGTTTGTATATTGGA+GGG - chr3_2:2754752-2754771 None:intergenic 35.0%
!! AGGTCTTGTTTGTATATTGG+AGG - chr3_2:2754753-2754772 None:intergenic 35.0%
!! GGTAGGTCTTGTTTGTATAT+TGG - chr3_2:2754756-2754775 None:intergenic 35.0%
TTACCATGCAACTTGAACTT+GGG + chr3_2:2754784-2754803 Msa0391270:CDS 35.0%
!! TCTAATGCTTGGTTTGCAAA+AGG - chr3_2:2754897-2754916 None:intergenic 35.0%
!! CTTTCGCTATTTCTAATGCT+TGG - chr3_2:2754908-2754927 None:intergenic 35.0%
CAAATGTAGTGAAGTTGTCA+TGG - chr3_2:2754970-2754989 None:intergenic 35.0%
CGTTGAACCTATTCAAATTC+CGG + chr3_2:2755037-2755056 Msa0391270:CDS 35.0%
GTTGAACCTATTCAAATTCC+GGG + chr3_2:2755038-2755057 Msa0391270:CDS 35.0%
ATACAACCCGGAATTTGAAT+AGG - chr3_2:2755047-2755066 None:intergenic 35.0%
! CGATCTTCAAAAAAAGTACG+AGG - chr3_2:2755092-2755111 None:intergenic 35.0%
TAATAGCTTCTCAGAAATGG+AGG + chr3_2:2755181-2755200 Msa0391270:CDS 35.0%
GACACATACAAAACAGACTT+TGG - chr3_2:2755344-2755363 None:intergenic 35.0%
! TCTGTTTTGTATGTGTCCTT+TGG + chr3_2:2755347-2755366 Msa0391270:CDS 35.0%
!! CAGATCAATGAACTAGCTTT+AGG + chr3_2:2755395-2755414 Msa0391270:CDS 35.0%
TGAGTGGTCAAAAATTCTTG+TGG + chr3_2:2755426-2755445 Msa0391270:CDS 35.0%
GAGTGGTCAAAAATTCTTGT+GGG + chr3_2:2755427-2755446 Msa0391270:CDS 35.0%
TTAGAGAGAACCAAAGAACA+AGG + chr3_2:2755533-2755552 Msa0391270:CDS 35.0%
TAGAGAGAACCAAAGAACAA+GGG + chr3_2:2755534-2755553 Msa0391270:CDS 35.0%
AACTACTAACCCTTGTTCTT+TGG - chr3_2:2755546-2755565 None:intergenic 35.0%
GATTTCTAACACATTGTGGT+GGG + chr3_2:2755615-2755634 Msa0391270:CDS 35.0%
TTAATAGAGGGACTTAAGGT+GGG + chr3_2:2755722-2755741 Msa0391270:CDS 35.0%
AGAAAGAGAGGAAATTGCTA+AGG + chr3_2:2755778-2755797 Msa0391270:CDS 35.0%
! GAAGATTGATGGCTAAATAG+AGG - chr3_2:2754588-2754607 None:intergenic 35.0%
AAGTGATATGGAAGTGGTTA+TGG - chr3_2:2754644-2754663 None:intergenic 35.0%
AGATTCAAGTAATTTGAGGG+TGG - chr3_2:2754700-2754719 None:intergenic 35.0%
!! GGTCTTGTTTGTATATTGGA+GGG - chr3_2:2754752-2754771 None:intergenic 35.0%
!! AGGTCTTGTTTGTATATTGG+AGG - chr3_2:2754753-2754772 None:intergenic 35.0%
!! GGTAGGTCTTGTTTGTATAT+TGG - chr3_2:2754756-2754775 None:intergenic 35.0%
TTACCATGCAACTTGAACTT+GGG + chr3_2:2754784-2754803 Msa0391270:CDS 35.0%
!! TCTAATGCTTGGTTTGCAAA+AGG - chr3_2:2754897-2754916 None:intergenic 35.0%
!! CTTTCGCTATTTCTAATGCT+TGG - chr3_2:2754908-2754927 None:intergenic 35.0%
CAAATGTAGTGAAGTTGTCA+TGG - chr3_2:2754970-2754989 None:intergenic 35.0%
CGTTGAACCTATTCAAATTC+CGG + chr3_2:2755037-2755056 Msa0391270:CDS 35.0%
GTTGAACCTATTCAAATTCC+GGG + chr3_2:2755038-2755057 Msa0391270:CDS 35.0%
ATACAACCCGGAATTTGAAT+AGG - chr3_2:2755047-2755066 None:intergenic 35.0%
! CGATCTTCAAAAAAAGTACG+AGG - chr3_2:2755092-2755111 None:intergenic 35.0%
TAATAGCTTCTCAGAAATGG+AGG + chr3_2:2755181-2755200 Msa0391270:CDS 35.0%
GACACATACAAAACAGACTT+TGG - chr3_2:2755344-2755363 None:intergenic 35.0%
! TCTGTTTTGTATGTGTCCTT+TGG + chr3_2:2755347-2755366 Msa0391270:CDS 35.0%
!! CAGATCAATGAACTAGCTTT+AGG + chr3_2:2755395-2755414 Msa0391270:CDS 35.0%
TGAGTGGTCAAAAATTCTTG+TGG + chr3_2:2755426-2755445 Msa0391270:CDS 35.0%
GAGTGGTCAAAAATTCTTGT+GGG + chr3_2:2755427-2755446 Msa0391270:CDS 35.0%
TTAGAGAGAACCAAAGAACA+AGG + chr3_2:2755533-2755552 Msa0391270:CDS 35.0%
TAGAGAGAACCAAAGAACAA+GGG + chr3_2:2755534-2755553 Msa0391270:CDS 35.0%
AACTACTAACCCTTGTTCTT+TGG - chr3_2:2755546-2755565 None:intergenic 35.0%
GATTTCTAACACATTGTGGT+GGG + chr3_2:2755615-2755634 Msa0391270:CDS 35.0%
TTAATAGAGGGACTTAAGGT+GGG + chr3_2:2755722-2755741 Msa0391270:CDS 35.0%
AGAAAGAGAGGAAATTGCTA+AGG + chr3_2:2755778-2755797 Msa0391270:CDS 35.0%
ATGGCTAAATAGAGGGATTG+AGG - chr3_2:2754580-2754599 None:intergenic 40.0%
AGATGCAAGTGATATGGAAG+TGG - chr3_2:2754650-2754669 None:intergenic 40.0%
AAAGTGCAGTGTATGGTTGA+GGG - chr3_2:2754726-2754745 None:intergenic 40.0%
CTTGTTTGTATATTGGAGGG+AGG - chr3_2:2754749-2754768 None:intergenic 40.0%
AGTTGCATGGTAACTTCTTG+TGG - chr3_2:2754777-2754796 None:intergenic 40.0%
GTTACCATGCAACTTGAACT+TGG + chr3_2:2754783-2754802 Msa0391270:CDS 40.0%
TACCATGCAACTTGAACTTG+GGG + chr3_2:2754785-2754804 Msa0391270:CDS 40.0%
TCAACAACCATTGCTACAAC+CGG - chr3_2:2754873-2754892 None:intergenic 40.0%
AAGTTGTCATGGCAGAAACA+GGG - chr3_2:2754959-2754978 None:intergenic 40.0%
! AAAAAGTACGAGGGAGATCT+TGG - chr3_2:2755082-2755101 None:intergenic 40.0%
ATCAGCAAGAGAGAATCTCT+TGG - chr3_2:2755150-2755169 None:intergenic 40.0%
AAGAGATTCTCTCTTGCTGA+TGG + chr3_2:2755149-2755168 Msa0391270:CDS 40.0%
AAGTACAGTGAGAGCCTTAA+TGG + chr3_2:2755205-2755224 Msa0391270:CDS 40.0%
AGTGAGAGCCTTAATGGAAA+AGG + chr3_2:2755211-2755230 Msa0391270:CDS 40.0%
! ACTCTGCTCCTTTTCCATTA+AGG - chr3_2:2755222-2755241 None:intergenic 40.0%
! TATGTGTCCTTTGGAAGTAG+AGG + chr3_2:2755356-2755375 Msa0391270:CDS 40.0%
TAAACTGCCTCTACTTCCAA+AGG - chr3_2:2755366-2755385 None:intergenic 40.0%
!!! AAGGGTCACTTTTAGCACTA+TGG - chr3_2:2755490-2755509 None:intergenic 40.0%
! GTTCTCTCTAAGAACCCATT+TGG - chr3_2:2755524-2755543 None:intergenic 40.0%
! GGTGGATTTCTAACACATTG+TGG + chr3_2:2755611-2755630 Msa0391270:CDS 40.0%
GGATTTCTAACACATTGTGG+TGG + chr3_2:2755614-2755633 Msa0391270:CDS 40.0%
AACAACGGCCAAGTTATCAT+TGG - chr3_2:2755674-2755693 None:intergenic 40.0%
ATGATAACTTGGCCGTTGTT+TGG + chr3_2:2755674-2755693 Msa0391270:CDS 40.0%
AATCTTTGCTCGCCAAACAA+CGG - chr3_2:2755689-2755708 None:intergenic 40.0%
GTTAATAGAGGGACTTAAGG+TGG + chr3_2:2755721-2755740 Msa0391270:CDS 40.0%
TTCTCAACTTGCCATTCGAA+TGG + chr3_2:2755916-2755935 Msa0391270:CDS 40.0%
TGCATTGCTTTCCATTCGAA+TGG - chr3_2:2755930-2755949 None:intergenic 40.0%
ATGGCTAAATAGAGGGATTG+AGG - chr3_2:2754580-2754599 None:intergenic 40.0%
AGATGCAAGTGATATGGAAG+TGG - chr3_2:2754650-2754669 None:intergenic 40.0%
AAAGTGCAGTGTATGGTTGA+GGG - chr3_2:2754726-2754745 None:intergenic 40.0%
CTTGTTTGTATATTGGAGGG+AGG - chr3_2:2754749-2754768 None:intergenic 40.0%
AGTTGCATGGTAACTTCTTG+TGG - chr3_2:2754777-2754796 None:intergenic 40.0%
GTTACCATGCAACTTGAACT+TGG + chr3_2:2754783-2754802 Msa0391270:CDS 40.0%
TACCATGCAACTTGAACTTG+GGG + chr3_2:2754785-2754804 Msa0391270:CDS 40.0%
TCAACAACCATTGCTACAAC+CGG - chr3_2:2754873-2754892 None:intergenic 40.0%
AAGTTGTCATGGCAGAAACA+GGG - chr3_2:2754959-2754978 None:intergenic 40.0%
! AAAAAGTACGAGGGAGATCT+TGG - chr3_2:2755082-2755101 None:intergenic 40.0%
ATCAGCAAGAGAGAATCTCT+TGG - chr3_2:2755150-2755169 None:intergenic 40.0%
AAGAGATTCTCTCTTGCTGA+TGG + chr3_2:2755149-2755168 Msa0391270:CDS 40.0%
AAGTACAGTGAGAGCCTTAA+TGG + chr3_2:2755205-2755224 Msa0391270:CDS 40.0%
AGTGAGAGCCTTAATGGAAA+AGG + chr3_2:2755211-2755230 Msa0391270:CDS 40.0%
! ACTCTGCTCCTTTTCCATTA+AGG - chr3_2:2755222-2755241 None:intergenic 40.0%
! TATGTGTCCTTTGGAAGTAG+AGG + chr3_2:2755356-2755375 Msa0391270:CDS 40.0%
TAAACTGCCTCTACTTCCAA+AGG - chr3_2:2755366-2755385 None:intergenic 40.0%
!!! AAGGGTCACTTTTAGCACTA+TGG - chr3_2:2755490-2755509 None:intergenic 40.0%
! GTTCTCTCTAAGAACCCATT+TGG - chr3_2:2755524-2755543 None:intergenic 40.0%
! GGTGGATTTCTAACACATTG+TGG + chr3_2:2755611-2755630 Msa0391270:CDS 40.0%
GGATTTCTAACACATTGTGG+TGG + chr3_2:2755614-2755633 Msa0391270:CDS 40.0%
AACAACGGCCAAGTTATCAT+TGG - chr3_2:2755674-2755693 None:intergenic 40.0%
ATGATAACTTGGCCGTTGTT+TGG + chr3_2:2755674-2755693 Msa0391270:CDS 40.0%
AATCTTTGCTCGCCAAACAA+CGG - chr3_2:2755689-2755708 None:intergenic 40.0%
GTTAATAGAGGGACTTAAGG+TGG + chr3_2:2755721-2755740 Msa0391270:CDS 40.0%
TTCTCAACTTGCCATTCGAA+TGG + chr3_2:2755916-2755935 Msa0391270:CDS 40.0%
TGCATTGCTTTCCATTCGAA+TGG - chr3_2:2755930-2755949 None:intergenic 40.0%
TGGGGAAGATGCAAGTGATA+TGG - chr3_2:2754656-2754675 None:intergenic 45.0%
GGATAGGTGCATCAATGTTG+GGG - chr3_2:2754674-2754693 None:intergenic 45.0%
GGGATAGGTGCATCAATGTT+GGG - chr3_2:2754675-2754694 None:intergenic 45.0%
TGGGATAGGTGCATCAATGT+TGG - chr3_2:2754676-2754695 None:intergenic 45.0%
CAAGTAATTTGAGGGTGGCT+GGG - chr3_2:2754695-2754714 None:intergenic 45.0%
TCAAGTAATTTGAGGGTGGC+TGG - chr3_2:2754696-2754715 None:intergenic 45.0%
! GAAAGTGCAGTGTATGGTTG+AGG - chr3_2:2754727-2754746 None:intergenic 45.0%
GCATGGTAACTTCTTGTGGT+AGG - chr3_2:2754773-2754792 None:intergenic 45.0%
!! AACCCCAAGTTCAAGTTGCA+TGG - chr3_2:2754790-2754809 None:intergenic 45.0%
CTCAACGATTCGCGAAAAGA+TGG - chr3_2:2754825-2754844 None:intergenic 45.0%
AACAACCATTGCTACAACCG+GGG - chr3_2:2754871-2754890 None:intergenic 45.0%
CAACAACCATTGCTACAACC+GGG - chr3_2:2754872-2754891 None:intergenic 45.0%
GAAGTTGTCATGGCAGAAAC+AGG - chr3_2:2754960-2754979 None:intergenic 45.0%
! ACAAGTTTCGGGTGAGTACA+TGG + chr3_2:2755010-2755029 Msa0391270:CDS 45.0%
CCGCAAATAGGTATACAACC+CGG - chr3_2:2755059-2755078 None:intergenic 45.0%
CCGGGTTGTATACCTATTTG+CGG + chr3_2:2755056-2755075 Msa0391270:CDS 45.0%
CTGCCTACGAGACAATTCTT+CGG + chr3_2:2755120-2755139 Msa0391270:CDS 45.0%
TTGCCGAAGAATTGTCTCGT+AGG - chr3_2:2755126-2755145 None:intergenic 45.0%
GTTGGACCGATCATACAAAC+AGG + chr3_2:2755266-2755285 Msa0391270:CDS 45.0%
ACGAATCGGTGTGTGTAAAG+TGG + chr3_2:2755303-2755322 Msa0391270:CDS 45.0%
ATCGGTGTGTGTAAAGTGGT+TGG + chr3_2:2755307-2755326 Msa0391270:CDS 45.0%
!! GCTTTAGGGTTAGAGTTGAG+TGG + chr3_2:2755410-2755429 Msa0391270:CDS 45.0%
!! AGTTTCTTTTTGGGCACCAC+AGG + chr3_2:2755562-2755581 Msa0391270:CDS 45.0%
ATCCTAAGCCACACTTCAAC+TGG + chr3_2:2755590-2755609 Msa0391270:CDS 45.0%
GAAATCCACCAGTTGAAGTG+TGG - chr3_2:2755601-2755620 None:intergenic 45.0%
!! CAGGAGTGCCAATGATAACT+TGG + chr3_2:2755663-2755682 Msa0391270:CDS 45.0%
ACTGCTGCATTAGCAGAAGA+TGG + chr3_2:2755875-2755894 Msa0391270:CDS 45.0%
CTGCTGCATTAGCAGAAGAT+GGG + chr3_2:2755876-2755895 Msa0391270:CDS 45.0%
AGAAGATGGGTCTTCCACAA+GGG + chr3_2:2755889-2755908 Msa0391270:CDS 45.0%
!! AAGTTGAGAAAGTGCCCTTG+TGG - chr3_2:2755906-2755925 None:intergenic 45.0%
TGGGGAAGATGCAAGTGATA+TGG - chr3_2:2754656-2754675 None:intergenic 45.0%
GGATAGGTGCATCAATGTTG+GGG - chr3_2:2754674-2754693 None:intergenic 45.0%
GGGATAGGTGCATCAATGTT+GGG - chr3_2:2754675-2754694 None:intergenic 45.0%
TGGGATAGGTGCATCAATGT+TGG - chr3_2:2754676-2754695 None:intergenic 45.0%
CAAGTAATTTGAGGGTGGCT+GGG - chr3_2:2754695-2754714 None:intergenic 45.0%
TCAAGTAATTTGAGGGTGGC+TGG - chr3_2:2754696-2754715 None:intergenic 45.0%
! GAAAGTGCAGTGTATGGTTG+AGG - chr3_2:2754727-2754746 None:intergenic 45.0%
GCATGGTAACTTCTTGTGGT+AGG - chr3_2:2754773-2754792 None:intergenic 45.0%
!! AACCCCAAGTTCAAGTTGCA+TGG - chr3_2:2754790-2754809 None:intergenic 45.0%
CTCAACGATTCGCGAAAAGA+TGG - chr3_2:2754825-2754844 None:intergenic 45.0%
AACAACCATTGCTACAACCG+GGG - chr3_2:2754871-2754890 None:intergenic 45.0%
CAACAACCATTGCTACAACC+GGG - chr3_2:2754872-2754891 None:intergenic 45.0%
GAAGTTGTCATGGCAGAAAC+AGG - chr3_2:2754960-2754979 None:intergenic 45.0%
! ACAAGTTTCGGGTGAGTACA+TGG + chr3_2:2755010-2755029 Msa0391270:CDS 45.0%
CCGCAAATAGGTATACAACC+CGG - chr3_2:2755059-2755078 None:intergenic 45.0%
CCGGGTTGTATACCTATTTG+CGG + chr3_2:2755056-2755075 Msa0391270:CDS 45.0%
CTGCCTACGAGACAATTCTT+CGG + chr3_2:2755120-2755139 Msa0391270:CDS 45.0%
TTGCCGAAGAATTGTCTCGT+AGG - chr3_2:2755126-2755145 None:intergenic 45.0%
GTTGGACCGATCATACAAAC+AGG + chr3_2:2755266-2755285 Msa0391270:CDS 45.0%
ACGAATCGGTGTGTGTAAAG+TGG + chr3_2:2755303-2755322 Msa0391270:CDS 45.0%
ATCGGTGTGTGTAAAGTGGT+TGG + chr3_2:2755307-2755326 Msa0391270:CDS 45.0%
!! GCTTTAGGGTTAGAGTTGAG+TGG + chr3_2:2755410-2755429 Msa0391270:CDS 45.0%
!! AGTTTCTTTTTGGGCACCAC+AGG + chr3_2:2755562-2755581 Msa0391270:CDS 45.0%
ATCCTAAGCCACACTTCAAC+TGG + chr3_2:2755590-2755609 Msa0391270:CDS 45.0%
GAAATCCACCAGTTGAAGTG+TGG - chr3_2:2755601-2755620 None:intergenic 45.0%
!! CAGGAGTGCCAATGATAACT+TGG + chr3_2:2755663-2755682 Msa0391270:CDS 45.0%
ACTGCTGCATTAGCAGAAGA+TGG + chr3_2:2755875-2755894 Msa0391270:CDS 45.0%
CTGCTGCATTAGCAGAAGAT+GGG + chr3_2:2755876-2755895 Msa0391270:CDS 45.0%
AGAAGATGGGTCTTCCACAA+GGG + chr3_2:2755889-2755908 Msa0391270:CDS 45.0%
!! AAGTTGAGAAAGTGCCCTTG+TGG - chr3_2:2755906-2755925 None:intergenic 45.0%
AATTTGAGGGTGGCTGGGAT+AGG - chr3_2:2754690-2754709 None:intergenic 50.0%
! AGGGAGGAAAGTGCAGTGTA+TGG - chr3_2:2754733-2754752 None:intergenic 50.0%
TTGCTCAACTTCAACCACCC+CGG + chr3_2:2754851-2754870 Msa0391270:CDS 50.0%
TGGCTTAGGATTTGAGCCTG+TGG - chr3_2:2755581-2755600 None:intergenic 50.0%
CACCAGTTGAAGTGTGGCTT+AGG - chr3_2:2755595-2755614 None:intergenic 50.0%
CTAAGCCACACTTCAACTGG+TGG + chr3_2:2755593-2755612 Msa0391270:CDS 50.0%
! GGGACTTAAGGTGGGTTTGA+AGG + chr3_2:2755730-2755749 Msa0391270:CDS 50.0%
GAGTGGCATTGCAGAAAGAG+AGG + chr3_2:2755766-2755785 Msa0391270:CDS 50.0%
CAGAAGATGGGTCTTCCACA+AGG + chr3_2:2755888-2755907 Msa0391270:CDS 50.0%
AATTTGAGGGTGGCTGGGAT+AGG - chr3_2:2754690-2754709 None:intergenic 50.0%
! AGGGAGGAAAGTGCAGTGTA+TGG - chr3_2:2754733-2754752 None:intergenic 50.0%
TTGCTCAACTTCAACCACCC+CGG + chr3_2:2754851-2754870 Msa0391270:CDS 50.0%
TGGCTTAGGATTTGAGCCTG+TGG - chr3_2:2755581-2755600 None:intergenic 50.0%
CACCAGTTGAAGTGTGGCTT+AGG - chr3_2:2755595-2755614 None:intergenic 50.0%
CTAAGCCACACTTCAACTGG+TGG + chr3_2:2755593-2755612 Msa0391270:CDS 50.0%
! GGGACTTAAGGTGGGTTTGA+AGG + chr3_2:2755730-2755749 Msa0391270:CDS 50.0%
GAGTGGCATTGCAGAAAGAG+AGG + chr3_2:2755766-2755785 Msa0391270:CDS 50.0%
CAGAAGATGGGTCTTCCACA+AGG + chr3_2:2755888-2755907 Msa0391270:CDS 50.0%
AACCACCCCGGTTGTAGCAA+TGG + chr3_2:2754863-2754882 Msa0391270:CDS 55.0%
AACCATTGCTACAACCGGGG+TGG - chr3_2:2754868-2754887 None:intergenic 55.0%
GGGAGATCTTGGCCGCAAAT+AGG - chr3_2:2755071-2755090 None:intergenic 55.0%
!! ACACTCGAGAGCATTGCGTC+AGG + chr3_2:2755644-2755663 Msa0391270:CDS 55.0%
AACCACCCCGGTTGTAGCAA+TGG + chr3_2:2754863-2754882 Msa0391270:CDS 55.0%
AACCATTGCTACAACCGGGG+TGG - chr3_2:2754868-2754887 None:intergenic 55.0%
GGGAGATCTTGGCCGCAAAT+AGG - chr3_2:2755071-2755090 None:intergenic 55.0%
!! ACACTCGAGAGCATTGCGTC+AGG + chr3_2:2755644-2755663 Msa0391270:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 2754540 2755955 2754540 ID=Msa0391270;Name=Msa0391270
chr3_2 mRNA 2754540 2755955 2754540 ID=Msa0391270-mRNA-1;Parent=Msa0391270;Name=Msa0391270-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|471
chr3_2 exon 2754540 2755955 2754540 ID=Msa0391270-mRNA-1:exon:793;Parent=Msa0391270-mRNA-1
chr3_2 CDS 2754540 2755955 2754540 ID=Msa0391270-mRNA-1:cds;Parent=Msa0391270-mRNA-1
Gene Sequence

>Msa0391270

ATGGCCGAAACAAAACCAACTAGTCATATAGTAGTAACCTCAATCCCTCTATTTAGCCATCAATCTTCTGTAATTGAGTTTTGCAAGAGACTCATTCAAGTCCATAACCACTTCCATATCACTTGCATCTTCCCCAACATTGATGCACCTATCCCAGCCACCCTCAAATTACTTGAATCTCTTCCCTCAACCATACACTGCACTTTCCTCCCTCCAATATACAAACAAGACCTACCACAAGAAGTTACCATGCAACTTGAACTTGGGGTTACTAAATCTATGCCATCTTTTCGCGAATCGTTGAGTTCGCTTTGCTCAACTTCAACCACCCCGGTTGTAGCAATGGTTGTTGATCCTTTTGCAAACCAAGCATTAGAAATAGCGAAAGAGTTCAACATCTTATCTTTCATGTACTTCCCTGTTTCTGCCATGACAACTTCACTACATTTGTATTTGCCAATACTTGATGAACAAGTTTCGGGTGAGTACATGGATCACGTTGAACCTATTCAAATTCCGGGTTGTATACCTATTTGCGGCCAAGATCTCCCTCGTACTTTTTTTGAAGATCGGTCTAGTACTGCCTACGAGACAATTCTTCGGCAAACCAAGAGATTCTCTCTTGCTGATGGTGTATTGATTAATAGCTTCTCAGAAATGGAGGAAAGTACAGTGAGAGCCTTAATGGAAAAGGAGCAGAGTAACAACAAACAATTAGTTTATCTCGTTGGACCGATCATACAAACAGGTTCAAATGAGTTAAACGAATCGGTGTGTGTAAAGTGGTTGGAGAATCAAAAACCAAAGTCTGTTTTGTATGTGTCCTTTGGAAGTAGAGGCAGTTTATCTCAAGAACAGATCAATGAACTAGCTTTAGGGTTAGAGTTGAGTGGTCAAAAATTCTTGTGGGTTTTGAGAGAACCTAGTAATTCTGAAATTCTAGGTGACCATAGTGCTAAAAGTGACCCTTTAAAATACTTACCAAATGGGTTCTTAGAGAGAACCAAAGAACAAGGGTTAGTAGTTTCTTTTTGGGCACCACAGGCTCAAATCCTAAGCCACACTTCAACTGGTGGATTTCTAACACATTGTGGTGGGAATTCAACACTCGAGAGCATTGCGTCAGGAGTGCCAATGATAACTTGGCCGTTGTTTGGCGAGCAAAGATTGAATGCTATTTTGTTAATAGAGGGACTTAAGGTGGGTTTGAAGGTAAAATTTAATGAGAGTGGCATTGCAGAAAGAGAGGAAATTGCTAAGGTGATTAGAGATTTAATGTTTGGTGAAGAAAGAAGTGAGATTCAACAAAGAATTGAAGAACTTAAATATGCTTCTACTGCTGCATTAGCAGAAGATGGGTCTTCCACAAGGGCACTTTCTCAACTTGCCATTCGAATGGAAAGCAATGCAAAGTAA

Protein sequence

>Msa0391270

MAETKPTSHIVVTSIPLFSHQSSVIEFCKRLIQVHNHFHITCIFPNIDAPIPATLKLLESLPSTIHCTFLPPIYKQDLPQEVTMQLELGVTKSMPSFRESLSSLCSTSTTPVVAMVVDPFANQALEIAKEFNILSFMYFPVSAMTTSLHLYLPILDEQVSGEYMDHVEPIQIPGCIPICGQDLPRTFFEDRSSTAYETILRQTKRFSLADGVLINSFSEMEESTVRALMEKEQSNNKQLVYLVGPIIQTGSNELNESVCVKWLENQKPKSVLYVSFGSRGSLSQEQINELALGLELSGQKFLWVLREPSNSEILGDHSAKSDPLKYLPNGFLERTKEQGLVVSFWAPQAQILSHTSTGGFLTHCGGNSTLESIASGVPMITWPLFGEQRLNAILLIEGLKVGLKVKFNESGIAEREEIAKVIRDLMFGEERSEIQQRIEELKYASTAALAEDGSSTRALSQLAIRMESNAK*