AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0682420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0682420 MtrunA17_Chr4g0028551 99.049 526 5 0 1 526 1 526 0.0 1070
Msa0682420 MtrunA17_Chr4g0028541 99.049 526 5 0 1 526 1 526 0.0 1070
Msa0682420 MtrunA17_Chr8g0368421 61.554 489 186 2 38 524 18 506 0.0 591
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0682420 AT1G08090.1 78.828 529 109 1 1 526 1 529 0.0 881
Msa0682420 AT5G60770.1 79.017 529 105 2 1 526 1 526 0.0 877
Msa0682420 AT1G08100.1 74.855 517 127 2 7 521 6 521 0.0 817
Msa0682420 AT5G60780.1 73.171 533 135 3 2 526 6 538 0.0 794
Msa0682420 AT3G45060.1 72.097 534 136 4 5 526 9 541 0.0 780
Msa0682420 AT1G12940.1 59.259 486 194 2 38 522 20 502 0.0 605
Msa0682420 AT5G14570.1 48.723 470 219 4 41 493 18 482 4.95e-152 444

Find 132 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATGTTATCATGGGTATTT+TGG 0.143284 4_4:-43927470 Msa0682420:CDS
GCCGGAGTCGCTTCGGTTTC+AGG 0.162646 4_4:-43927865 Msa0682420:CDS
TGCTGCTGGTTGGGGTAATA+TGG 0.200878 4_4:-43927602 Msa0682420:CDS
ATCAACTGGTAATGCAAATT+TGG 0.211102 4_4:+43928062 None:intergenic
AAAATTATTGGACTTGTTAA+TGG 0.213969 4_4:-43927628 Msa0682420:CDS
ATGTTTAATAGTAAAATTAT+TGG 0.217642 4_4:-43927640 Msa0682420:CDS
CCTACTTTATGGTTACTCTA+TGG 0.225302 4_4:-43927226 Msa0682420:CDS
ATTCATATCAAGAAGATCTT+TGG 0.235165 4_4:-43926676 Msa0682420:CDS
CATTTGTTTCATGCCAATAT+TGG 0.240129 4_4:-43927672 Msa0682420:CDS
GGAATCATTGCTGCATCCTT+TGG 0.291659 4_4:-43926927 Msa0682420:CDS
CAACAGCTTCAGGTCTTTCA+TGG 0.291908 4_4:-43926569 Msa0682420:CDS
CACTCAGCTTATTATGCCTT+TGG 0.295935 4_4:-43927569 Msa0682420:CDS
GTTTATGATTGGTTTCTCTT+TGG 0.307610 4_4:-43927698 Msa0682420:CDS
AGCTCCATGCATGGAGTAAC+TGG 0.308320 4_4:-43928144 Msa0682420:CDS
AGATCTTTGGGAATTATATC+AGG 0.310342 4_4:-43926663 Msa0682420:CDS
TAATGGTACTGCTGCTGGTT+GGG 0.317688 4_4:-43927611 Msa0682420:CDS
GGAATTATATCAGGTTTAAC+TGG 0.331122 4_4:-43926654 Msa0682420:CDS
GGTTGCATCAGCCAAGTCTT+AGG 0.340353 4_4:-43926401 Msa0682420:CDS
TAATGGGTAGGAGTTGTATT+TGG 0.342946 4_4:+43926321 None:intergenic
TGAAAAGAGTTTGAAAACTT+TGG 0.345000 4_4:+43928026 None:intergenic
AACATAGTTGCTCGTCCTTT+CGG 0.345457 4_4:-43926897 Msa0682420:CDS
GCAGGTGGAAACTTTGGTTC+TGG 0.351058 4_4:-43926630 Msa0682420:CDS
GGTGCAATTTGTGACCTATT+AGG 0.354243 4_4:-43927817 Msa0682420:CDS
TTCCAGCTGTGTGTAGCTTT+AGG 0.354844 4_4:+43926946 None:intergenic
TCATTTGTTGAAAATGCTTC+TGG 0.358655 4_4:-43927736 Msa0682420:CDS
GATGTAGCAGCAAGATTATT+CGG 0.362131 4_4:-43926861 Msa0682420:CDS
ACATAGTACTCATCCAATAT+TGG 0.362676 4_4:+43927659 None:intergenic
AGAAAGATATCCATGATAAA+TGG 0.374158 4_4:+43927977 None:intergenic
TTAAGGTTGTCCCGGATGAT+AGG 0.374477 4_4:+43927913 None:intergenic
CTTCTGGTTATATAGCAGTT+AGG 0.379548 4_4:-43927720 Msa0682420:CDS
TGGTTGGTTGCATGTTATCA+TGG 0.382144 4_4:-43927479 Msa0682420:CDS
GTGCTACTCCTTTCACTGCT+TGG 0.383160 4_4:-43927522 Msa0682420:CDS
TTCATATCAAGAAGATCTTT+GGG 0.385193 4_4:-43926675 Msa0682420:CDS
GGTTGGGGTAATATGGGTGG+TGG 0.398747 4_4:-43927595 Msa0682420:CDS
ACTCCATGCATGGAGCTTCC+TGG 0.410797 4_4:+43928150 None:intergenic
AACCATAACGTGGACCTAAT+AGG 0.411808 4_4:+43927803 None:intergenic
GGTATGCTATAACAAATTAC+AGG 0.417060 4_4:-43927263 Msa0682420:CDS
GCTGCTGGTTGGGGTAATAT+GGG 0.417787 4_4:-43927601 Msa0682420:CDS
CTACTTTATGGTTACTCTAT+GGG 0.419373 4_4:-43927225 Msa0682420:CDS
GCTGCATGTGGTGCAACATT+TGG 0.420104 4_4:-43926708 Msa0682420:CDS
GGCATATAACTTGTACTAAT+GGG 0.426628 4_4:+43926305 None:intergenic
CCTTGGTGCTTTGCAGAAGA+AGG 0.426831 4_4:-43927413 Msa0682420:CDS
GTTGGGGTAATATGGGTGGT+GGG 0.435234 4_4:-43927594 Msa0682420:CDS
ATAGCAGTTAGGTTTATGAT+TGG 0.436014 4_4:-43927709 Msa0682420:CDS
TGGATGGGTGCAATGATTGT+TGG 0.437054 4_4:-43926549 Msa0682420:CDS
TATATCAATGGCTGATATTG+AGG 0.442270 4_4:-43928178 None:intergenic
AAAGATCTTCTTGATATGAA+TGG 0.444365 4_4:+43926678 None:intergenic
CACCATTAGTCCCTATCATC+CGG 0.446745 4_4:-43927924 Msa0682420:CDS
GACCTATTAGGTCCACGTTA+TGG 0.448846 4_4:-43927805 Msa0682420:CDS
AATGGTACTGCTGCTGGTTG+GGG 0.451568 4_4:-43927610 Msa0682420:CDS
ACTGGTGCAGGTGGAAACTT+TGG 0.451991 4_4:-43926636 Msa0682420:CDS
GGAAAATGAACAAATGCAAC+AGG 0.456403 4_4:+43926516 None:intergenic
TGAGAACCTTCCATTTATCA+TGG 0.456413 4_4:-43927987 Msa0682420:CDS
TGCGAATGTCGAGACGAAAC+AGG 0.457564 4_4:+43927951 None:intergenic
CTTGTTAATGGTACTGCTGC+TGG 0.461616 4_4:-43927616 Msa0682420:CDS
AGCTTCAGGTCTTTCATGGA+TGG 0.465615 4_4:-43926565 Msa0682420:CDS
ATATCAGGTTTAACTGGTGC+AGG 0.466260 4_4:-43926648 Msa0682420:CDS
AGAAAACTCCTCCTAGGGTT+TGG 0.467221 4_4:+43926805 None:intergenic
TTGCTGAGTATTTCTATGAC+AGG 0.469828 4_4:-43927176 Msa0682420:intron
ATATGCAGAAAACTCCTCCT+AGG 0.470665 4_4:+43926799 None:intergenic
AACACTATTACACTTCTGAA+TGG 0.470788 4_4:-43926446 Msa0682420:CDS
GCTGATATTGAGGGTTCACC+AGG 0.480863 4_4:-43928168 Msa0682420:CDS
CCATAGAGTAACCATAAAGT+AGG 0.483674 4_4:+43927226 None:intergenic
TGGTAACGCCGGAGTCGCTT+CGG 0.494934 4_4:-43927872 Msa0682420:CDS
TTAATGGTACTGCTGCTGGT+TGG 0.498414 4_4:-43927612 Msa0682420:CDS
TCTTCCAGTTACTCCATGCA+TGG 0.504862 4_4:+43928140 None:intergenic
TTGGGGTAATATGGGTGGTG+GGG 0.507796 4_4:-43927593 Msa0682420:CDS
AACCTAAAGCTACACACAGC+TGG 0.512286 4_4:-43926948 Msa0682420:CDS
CTATAACAAATTACAGGACA+TGG 0.513380 4_4:-43927257 Msa0682420:CDS
TTGTGAGGTTAAGGTTGTCC+CGG 0.513783 4_4:+43927905 None:intergenic
TCCCGGATGATAGGGACTAA+TGG 0.521058 4_4:+43927922 None:intergenic
GTGGTATCAGTTGGAACCAT+TGG 0.524676 4_4:+43928087 None:intergenic
GATTTGTGTTCAGAATCAAC+TGG 0.525048 4_4:+43928048 None:intergenic
ATGAAGATGAAGTACAGAAA+GGG 0.525551 4_4:-43926422 Msa0682420:CDS
AATGAAGATGAAGTACAGAA+AGG 0.527504 4_4:-43926423 Msa0682420:CDS
TGGGTAGGAGTTGTATTTGG+TGG 0.527993 4_4:+43926324 None:intergenic
TAAGGTTGTCCCGGATGATA+GGG 0.533163 4_4:+43927914 None:intergenic
TCGGCATGCGAGGAAGGCTA+TGG 0.535742 4_4:-43926842 Msa0682420:CDS
GATTTACCTGATGGTAACCT+TGG 0.538623 4_4:-43927430 Msa0682420:CDS
TCCATGATCCTCTTCTCAGT+TGG 0.543814 4_4:-43926738 Msa0682420:CDS
GATTATTCGGCATGCGAGGA+AGG 0.544135 4_4:-43926848 Msa0682420:CDS
ATATCAATGGCTGATATTGA+GGG 0.546989 4_4:-43928177 None:intergenic
GTCATCAGTTGCTTCACCAA+TGG 0.548350 4_4:-43928103 Msa0682420:CDS
CATTGCTGCATCCTTTGGAA+TGG 0.548449 4_4:-43926922 Msa0682420:CDS
GGTTGGTTGCATGTTATCAT+GGG 0.550695 4_4:-43927478 Msa0682420:CDS
GCTTCAGGTCTTTCATGGAT+GGG 0.552112 4_4:-43926564 Msa0682420:CDS
ATGATAACATGCAACCAACC+AGG 0.556711 4_4:+43927481 None:intergenic
CTTGTGCTCCAACTGAGAAG+AGG 0.561854 4_4:+43926730 None:intergenic
ACCATTAGTCCCTATCATCC+GGG 0.562252 4_4:-43927923 Msa0682420:CDS
ACCTGAAACCGAAGCGACTC+CGG 0.567599 4_4:+43927864 None:intergenic
AACTATGTTTGCCATTCCAA+AGG 0.569835 4_4:+43926911 None:intergenic
CATAGAGTAACCATAAAGTA+GGG 0.569934 4_4:+43927227 None:intergenic
AACCTCACAAAATCCGATGT+TGG 0.571313 4_4:-43927892 Msa0682420:CDS
CTTGGTGCTTTGCAGAAGAA+GGG 0.574830 4_4:-43927412 Msa0682420:CDS
AATTTGGCTGTGGTATCAGT+TGG 0.576596 4_4:+43928078 None:intergenic
GCAATTCTCCAAGCAGTGAA+AGG 0.578221 4_4:+43927514 None:intergenic
GAGAATAGTCGTTCTGAGAG+AGG 0.578576 4_4:-43926372 Msa0682420:CDS
TTGGTGCTGTTAGCATGATA+AGG 0.579781 4_4:+43927773 None:intergenic
AATGACATACAAAACACTGT+TGG 0.582355 4_4:+43927754 None:intergenic
TTCTCAGCAAACCTAAGACT+TGG 0.583555 4_4:+43926390 None:intergenic
TCACCAGGAAGCTCCATGCA+TGG 0.586180 4_4:-43928153 Msa0682420:CDS
AAATGGAAGGTTCTCATGTG+AGG 0.586590 4_4:+43927994 None:intergenic
TTAGGTCAAGATTTACCTGA+TGG 0.587027 4_4:-43927439 Msa0682420:CDS
AAAGCACCAAGGTTACCATC+AGG 0.588442 4_4:+43927424 None:intergenic
TATGAGTTGATTAGAAGAGC+TGG 0.589543 4_4:-43927544 Msa0682420:CDS
TATAACTTGTACTAATGGGT+AGG 0.599050 4_4:+43926309 None:intergenic
ATAGTTGCTCGTCCTTTCGG+AGG 0.607439 4_4:-43926894 Msa0682420:CDS
ATCATGGATAGTACTGCGAT+CGG 0.609698 4_4:+43926753 None:intergenic
TGGATCTTCCAAACCCTAGG+AGG 0.611729 4_4:-43926813 Msa0682420:CDS
CCTTCTTCTGCAAAGCACCA+AGG 0.613924 4_4:+43927413 None:intergenic
TCAGGTTTAACTGGTGCAGG+TGG 0.614618 4_4:-43926645 Msa0682420:CDS
TCCAACTGAGAAGAGGATCA+TGG 0.614752 4_4:+43926737 None:intergenic
TATGCAGAAAACTCCTCCTA+GGG 0.614927 4_4:+43926800 None:intergenic
AATGGAAGGTTCTCATGTGA+GGG 0.615898 4_4:+43927995 None:intergenic
CTAATCAACTCATACACCAA+AGG 0.617873 4_4:+43927553 None:intergenic
GAGGAAGGCTATGGACACTC+TGG 0.618172 4_4:-43926833 Msa0682420:CDS
AGATATCCATGATAAATGGA+AGG 0.625047 4_4:+43927981 None:intergenic
TGAAGCAACTGATGACATGA+AGG 0.627231 4_4:+43928110 None:intergenic
GCTGGTTGGGGTAATATGGG+TGG 0.628336 4_4:-43927598 Msa0682420:CDS
AAATCCGATGTTGGTAACGC+CGG 0.634865 4_4:-43927883 Msa0682420:CDS
GCAAGATTATTCGGCATGCG+AGG 0.636291 4_4:-43926852 Msa0682420:CDS
CTCTGGATCTTCCAAACCCT+AGG 0.638609 4_4:-43926816 Msa0682420:CDS
TGGTAATGCAAATTTGGCTG+TGG 0.639028 4_4:+43928068 None:intergenic
GACTCCGGCGTTACCAACAT+CGG 0.646168 4_4:+43927879 None:intergenic
TGATAACATGCAACCAACCA+GGG 0.648113 4_4:+43927482 None:intergenic
CTCAGCAATGACATTGTCAG+TGG 0.659860 4_4:+43927191 None:intergenic
TCTGATGCATATCCTCCGAA+AGG 0.660618 4_4:+43926882 None:intergenic
TTCTGAGAGAGGAAAACGTG+TGG 0.676787 4_4:-43926361 Msa0682420:CDS
GTTGGAGCACAAGCTGCATG+TGG 0.687636 4_4:-43926720 Msa0682420:CDS
AGGAAAGCACAACCATAACG+TGG 0.709978 4_4:+43927793 None:intergenic
CAAAGGCATAATAAGCTGAG+TGG 0.711499 4_4:+43927570 None:intergenic
AGGAACATGCTACCCCACTG+TGG 0.730068 4_4:+43926495 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTTTAATAGTAAAATTAT+TGG - chr4_4:43926851-43926870 Msa0682420:CDS 10.0%
!! ATGTTTAATAGTAAAATTAT+TGG - chr4_4:43926851-43926870 Msa0682420:CDS 10.0%
!! TCAAAGTATATTAAATGATT+TGG - chr4_4:43927180-43927199 Msa0682420:CDS 15.0%
!! CTAATGAATTAATATAAAAC+AGG - chr4_4:43927517-43927536 Msa0682420:CDS 15.0%
!! TCAAAGTATATTAAATGATT+TGG - chr4_4:43927180-43927199 Msa0682420:CDS 15.0%
!! CTAATGAATTAATATAAAAC+AGG - chr4_4:43927517-43927536 Msa0682420:CDS 15.0%
!!! AAAATTATTGGACTTGTTAA+TGG - chr4_4:43926863-43926882 Msa0682420:CDS 20.0%
!!! TTGGTTATGATTTTTTTTTC+AGG - chr4_4:43927199-43927218 Msa0682420:CDS 20.0%
!!! CGTATCATAATTTTAAATTG+TGG + chr4_4:43927428-43927447 None:intergenic 20.0%
!!! CTCAATTTTTTTTAAAACCT+AGG - chr4_4:43927455-43927474 Msa0682420:CDS 20.0%
!!! AAAATTATTGGACTTGTTAA+TGG - chr4_4:43926863-43926882 Msa0682420:CDS 20.0%
!!! TTGGTTATGATTTTTTTTTC+AGG - chr4_4:43927199-43927218 Msa0682420:CDS 20.0%
!!! CGTATCATAATTTTAAATTG+TGG + chr4_4:43927428-43927447 None:intergenic 20.0%
!!! CTCAATTTTTTTTAAAACCT+AGG - chr4_4:43927455-43927474 Msa0682420:CDS 20.0%
! TGAAAAGAGTTTGAAAACTT+TGG + chr4_4:43926468-43926487 None:intergenic 25.0%
!! AGTTTTCAAACTCTTTTCAA+TGG - chr4_4:43926469-43926488 Msa0682420:CDS 25.0%
! AGAAAGATATCCATGATAAA+TGG + chr4_4:43926517-43926536 None:intergenic 25.0%
! TGTAGATATATACAATCTTG+AGG + chr4_4:43927370-43927389 None:intergenic 25.0%
! AAAGATCTTCTTGATATGAA+TGG + chr4_4:43927816-43927835 None:intergenic 25.0%
! ATTCATATCAAGAAGATCTT+TGG - chr4_4:43927815-43927834 Msa0682420:CDS 25.0%
! TTCATATCAAGAAGATCTTT+GGG - chr4_4:43927816-43927835 Msa0682420:CDS 25.0%
! TGAAAAGAGTTTGAAAACTT+TGG + chr4_4:43926468-43926487 None:intergenic 25.0%
!! AGTTTTCAAACTCTTTTCAA+TGG - chr4_4:43926469-43926488 Msa0682420:CDS 25.0%
! AGAAAGATATCCATGATAAA+TGG + chr4_4:43926517-43926536 None:intergenic 25.0%
! TGTAGATATATACAATCTTG+AGG + chr4_4:43927370-43927389 None:intergenic 25.0%
! AAAGATCTTCTTGATATGAA+TGG + chr4_4:43927816-43927835 None:intergenic 25.0%
! ATTCATATCAAGAAGATCTT+TGG - chr4_4:43927815-43927834 Msa0682420:CDS 25.0%
! TTCATATCAAGAAGATCTTT+GGG - chr4_4:43927816-43927835 Msa0682420:CDS 25.0%
! ATCAACTGGTAATGCAAATT+TGG + chr4_4:43926432-43926451 None:intergenic 30.0%
AGATATCCATGATAAATGGA+AGG + chr4_4:43926513-43926532 None:intergenic 30.0%
!! TTTCAGGTAGTATTTTCTCA+AGG - chr4_4:43926642-43926661 Msa0682420:CDS 30.0%
AATGACATACAAAACACTGT+TGG + chr4_4:43926740-43926759 None:intergenic 30.0%
! TCATTTGTTGAAAATGCTTC+TGG - chr4_4:43926755-43926774 Msa0682420:CDS 30.0%
ATAGCAGTTAGGTTTATGAT+TGG - chr4_4:43926782-43926801 Msa0682420:CDS 30.0%
!! GTTTATGATTGGTTTCTCTT+TGG - chr4_4:43926793-43926812 Msa0682420:CDS 30.0%
CATTTGTTTCATGCCAATAT+TGG - chr4_4:43926819-43926838 Msa0682420:CDS 30.0%
ACATAGTACTCATCCAATAT+TGG + chr4_4:43926835-43926854 None:intergenic 30.0%
!!! GGTATTTTGGTCTTAACATT+AGG - chr4_4:43927034-43927053 Msa0682420:intron 30.0%
GGTATGCTATAACAAATTAC+AGG - chr4_4:43927228-43927247 Msa0682420:CDS 30.0%
CTATAACAAATTACAGGACA+TGG - chr4_4:43927234-43927253 Msa0682420:CDS 30.0%
CATAGAGTAACCATAAAGTA+GGG + chr4_4:43927267-43927286 None:intergenic 30.0%
CTACTTTATGGTTACTCTAT+GGG - chr4_4:43927266-43927285 Msa0682420:CDS 30.0%
! AGATCTTTGGGAATTATATC+AGG - chr4_4:43927828-43927847 Msa0682420:CDS 30.0%
GGAATTATATCAGGTTTAAC+TGG - chr4_4:43927837-43927856 Msa0682420:CDS 30.0%
! TCAAAATTTTCAACAGCTTC+AGG - chr4_4:43927912-43927931 Msa0682420:CDS 30.0%
! ATTTGTTCATTTTCCACAGT+GGG - chr4_4:43927983-43928002 Msa0682420:CDS 30.0%
! TCTTCATTGATCTCTTTTGA+AGG + chr4_4:43928026-43928045 None:intergenic 30.0%
AACACTATTACACTTCTGAA+TGG - chr4_4:43928045-43928064 Msa0682420:CDS 30.0%
AATGAAGATGAAGTACAGAA+AGG - chr4_4:43928068-43928087 Msa0682420:CDS 30.0%
ATGAAGATGAAGTACAGAAA+GGG - chr4_4:43928069-43928088 Msa0682420:CDS 30.0%
! ATCAACTGGTAATGCAAATT+TGG + chr4_4:43926432-43926451 None:intergenic 30.0%
AGATATCCATGATAAATGGA+AGG + chr4_4:43926513-43926532 None:intergenic 30.0%
!! TTTCAGGTAGTATTTTCTCA+AGG - chr4_4:43926642-43926661 Msa0682420:CDS 30.0%
AATGACATACAAAACACTGT+TGG + chr4_4:43926740-43926759 None:intergenic 30.0%
! TCATTTGTTGAAAATGCTTC+TGG - chr4_4:43926755-43926774 Msa0682420:CDS 30.0%
ATAGCAGTTAGGTTTATGAT+TGG - chr4_4:43926782-43926801 Msa0682420:CDS 30.0%
!! GTTTATGATTGGTTTCTCTT+TGG - chr4_4:43926793-43926812 Msa0682420:CDS 30.0%
CATTTGTTTCATGCCAATAT+TGG - chr4_4:43926819-43926838 Msa0682420:CDS 30.0%
ACATAGTACTCATCCAATAT+TGG + chr4_4:43926835-43926854 None:intergenic 30.0%
!!! GGTATTTTGGTCTTAACATT+AGG - chr4_4:43927034-43927053 Msa0682420:intron 30.0%
GGTATGCTATAACAAATTAC+AGG - chr4_4:43927228-43927247 Msa0682420:CDS 30.0%
CTATAACAAATTACAGGACA+TGG - chr4_4:43927234-43927253 Msa0682420:CDS 30.0%
CATAGAGTAACCATAAAGTA+GGG + chr4_4:43927267-43927286 None:intergenic 30.0%
CTACTTTATGGTTACTCTAT+GGG - chr4_4:43927266-43927285 Msa0682420:CDS 30.0%
! AGATCTTTGGGAATTATATC+AGG - chr4_4:43927828-43927847 Msa0682420:CDS 30.0%
GGAATTATATCAGGTTTAAC+TGG - chr4_4:43927837-43927856 Msa0682420:CDS 30.0%
! TCAAAATTTTCAACAGCTTC+AGG - chr4_4:43927912-43927931 Msa0682420:CDS 30.0%
! ATTTGTTCATTTTCCACAGT+GGG - chr4_4:43927983-43928002 Msa0682420:CDS 30.0%
! TCTTCATTGATCTCTTTTGA+AGG + chr4_4:43928026-43928045 None:intergenic 30.0%
AACACTATTACACTTCTGAA+TGG - chr4_4:43928045-43928064 Msa0682420:CDS 30.0%
AATGAAGATGAAGTACAGAA+AGG - chr4_4:43928068-43928087 Msa0682420:CDS 30.0%
ATGAAGATGAAGTACAGAAA+GGG - chr4_4:43928069-43928088 Msa0682420:CDS 30.0%
GATTTGTGTTCAGAATCAAC+TGG + chr4_4:43926446-43926465 None:intergenic 35.0%
TGAGAACCTTCCATTTATCA+TGG - chr4_4:43926504-43926523 Msa0682420:CDS 35.0%
! TATTTTCTCAAGGCTTGCAA+TGG - chr4_4:43926652-43926671 Msa0682420:CDS 35.0%
! ATTTTCTCAAGGCTTGCAAT+GGG - chr4_4:43926653-43926672 Msa0682420:CDS 35.0%
! CTTCTGGTTATATAGCAGTT+AGG - chr4_4:43926771-43926790 Msa0682420:CDS 35.0%
CTAATCAACTCATACACCAA+AGG + chr4_4:43926941-43926960 None:intergenic 35.0%
!! TATGAGTTGATTAGAAGAGC+TGG - chr4_4:43926947-43926966 Msa0682420:CDS 35.0%
!!! AGAATTGCCTTTTTTATCCC+TGG - chr4_4:43926992-43927011 Msa0682420:intron 35.0%
! GCATGTTATCATGGGTATTT+TGG - chr4_4:43927021-43927040 Msa0682420:intron 35.0%
TTAGGTCAAGATTTACCTGA+TGG - chr4_4:43927052-43927071 Msa0682420:intron 35.0%
!!! GATTTTTTTTTCAGGTGCTG+TGG - chr4_4:43927207-43927226 Msa0682420:CDS 35.0%
! TGGATTTTTGCCCTACTTTA+TGG - chr4_4:43927254-43927273 Msa0682420:CDS 35.0%
CCATAGAGTAACCATAAAGT+AGG + chr4_4:43927268-43927287 None:intergenic 35.0%
CCTACTTTATGGTTACTCTA+TGG - chr4_4:43927265-43927284 Msa0682420:CDS 35.0%
! TTGCTGAGTATTTCTATGAC+AGG - chr4_4:43927315-43927334 Msa0682420:intron 35.0%
! AACGTTTGTTACAATCTCCT+AGG + chr4_4:43927475-43927494 None:intergenic 35.0%
AACTATGTTTGCCATTCCAA+AGG + chr4_4:43927583-43927602 None:intergenic 35.0%
GATGTAGCAGCAAGATTATT+CGG - chr4_4:43927630-43927649 Msa0682420:CDS 35.0%
GGAAAATGAACAAATGCAAC+AGG + chr4_4:43927978-43927997 None:intergenic 35.0%
! CATTTGTTCATTTTCCACAG+TGG - chr4_4:43927982-43928001 Msa0682420:CDS 35.0%
! TTTGTTCATTTTCCACAGTG+GGG - chr4_4:43927984-43928003 Msa0682420:CDS 35.0%
!! TCATTGATCTCTTTTGAAGG+TGG + chr4_4:43928023-43928042 None:intergenic 35.0%
! TAATGGGTAGGAGTTGTATT+TGG + chr4_4:43928173-43928192 None:intergenic 35.0%
GATTTGTGTTCAGAATCAAC+TGG + chr4_4:43926446-43926465 None:intergenic 35.0%
TGAGAACCTTCCATTTATCA+TGG - chr4_4:43926504-43926523 Msa0682420:CDS 35.0%
! TATTTTCTCAAGGCTTGCAA+TGG - chr4_4:43926652-43926671 Msa0682420:CDS 35.0%
! ATTTTCTCAAGGCTTGCAAT+GGG - chr4_4:43926653-43926672 Msa0682420:CDS 35.0%
! CTTCTGGTTATATAGCAGTT+AGG - chr4_4:43926771-43926790 Msa0682420:CDS 35.0%
CTAATCAACTCATACACCAA+AGG + chr4_4:43926941-43926960 None:intergenic 35.0%
!! TATGAGTTGATTAGAAGAGC+TGG - chr4_4:43926947-43926966 Msa0682420:CDS 35.0%
!!! AGAATTGCCTTTTTTATCCC+TGG - chr4_4:43926992-43927011 Msa0682420:intron 35.0%
! GCATGTTATCATGGGTATTT+TGG - chr4_4:43927021-43927040 Msa0682420:intron 35.0%
TTAGGTCAAGATTTACCTGA+TGG - chr4_4:43927052-43927071 Msa0682420:intron 35.0%
!!! GATTTTTTTTTCAGGTGCTG+TGG - chr4_4:43927207-43927226 Msa0682420:CDS 35.0%
! TGGATTTTTGCCCTACTTTA+TGG - chr4_4:43927254-43927273 Msa0682420:CDS 35.0%
CCATAGAGTAACCATAAAGT+AGG + chr4_4:43927268-43927287 None:intergenic 35.0%
CCTACTTTATGGTTACTCTA+TGG - chr4_4:43927265-43927284 Msa0682420:CDS 35.0%
! TTGCTGAGTATTTCTATGAC+AGG - chr4_4:43927315-43927334 Msa0682420:intron 35.0%
! AACGTTTGTTACAATCTCCT+AGG + chr4_4:43927475-43927494 None:intergenic 35.0%
AACTATGTTTGCCATTCCAA+AGG + chr4_4:43927583-43927602 None:intergenic 35.0%
GATGTAGCAGCAAGATTATT+CGG - chr4_4:43927630-43927649 Msa0682420:CDS 35.0%
GGAAAATGAACAAATGCAAC+AGG + chr4_4:43927978-43927997 None:intergenic 35.0%
! CATTTGTTCATTTTCCACAG+TGG - chr4_4:43927982-43928001 Msa0682420:CDS 35.0%
! TTTGTTCATTTTCCACAGTG+GGG - chr4_4:43927984-43928003 Msa0682420:CDS 35.0%
!! TCATTGATCTCTTTTGAAGG+TGG + chr4_4:43928023-43928042 None:intergenic 35.0%
! TAATGGGTAGGAGTTGTATT+TGG + chr4_4:43928173-43928192 None:intergenic 35.0%
TGAAGCAACTGATGACATGA+AGG + chr4_4:43926384-43926403 None:intergenic 40.0%
AATTTGGCTGTGGTATCAGT+TGG + chr4_4:43926416-43926435 None:intergenic 40.0%
! TGGTAATGCAAATTTGGCTG+TGG + chr4_4:43926426-43926445 None:intergenic 40.0%
AATGGAAGGTTCTCATGTGA+GGG + chr4_4:43926499-43926518 None:intergenic 40.0%
AAATGGAAGGTTCTCATGTG+AGG + chr4_4:43926500-43926519 None:intergenic 40.0%
! CATCGGATTTTGTGAGGTTA+AGG + chr4_4:43926598-43926617 None:intergenic 40.0%
AACCTCACAAAATCCGATGT+TGG - chr4_4:43926599-43926618 Msa0682420:CDS 40.0%
! TACCAACATCGGATTTTGTG+AGG + chr4_4:43926604-43926623 None:intergenic 40.0%
GGTGCAATTTGTGACCTATT+AGG - chr4_4:43926674-43926693 Msa0682420:CDS 40.0%
AACCATAACGTGGACCTAAT+AGG + chr4_4:43926691-43926710 None:intergenic 40.0%
!! TTGGTGCTGTTAGCATGATA+AGG + chr4_4:43926721-43926740 None:intergenic 40.0%
! CAAAGGCATAATAAGCTGAG+TGG + chr4_4:43926924-43926943 None:intergenic 40.0%
CACTCAGCTTATTATGCCTT+TGG - chr4_4:43926922-43926941 Msa0682420:CDS 40.0%
!!! TTGCCTTTTTTATCCCTGGT+TGG - chr4_4:43926996-43927015 Msa0682420:intron 40.0%
CAACCAACCAGGGATAAAAA+AGG + chr4_4:43927002-43927021 None:intergenic 40.0%
TGATAACATGCAACCAACCA+GGG + chr4_4:43927012-43927031 None:intergenic 40.0%
ATGATAACATGCAACCAACC+AGG + chr4_4:43927013-43927032 None:intergenic 40.0%
! TGGTTGGTTGCATGTTATCA+TGG - chr4_4:43927012-43927031 Msa0682420:intron 40.0%
! GGTTGGTTGCATGTTATCAT+GGG - chr4_4:43927013-43927032 Msa0682420:intron 40.0%
GATTTACCTGATGGTAACCT+TGG - chr4_4:43927061-43927080 Msa0682420:intron 40.0%
TTAAATTGCAACCGCAGTTG+CGG - chr4_4:43927401-43927420 Msa0682420:CDS 40.0%
AACATAGTTGCTCGTCCTTT+CGG - chr4_4:43927594-43927613 Msa0682420:CDS 40.0%
TATGCAGAAAACTCCTCCTA+GGG + chr4_4:43927694-43927713 None:intergenic 40.0%
ATATGCAGAAAACTCCTCCT+AGG + chr4_4:43927695-43927714 None:intergenic 40.0%
! TAGGAGGAGTTTTCTGCATA+TGG - chr4_4:43927694-43927713 Msa0682420:CDS 40.0%
! GGAGTTTTCTGCATATGGTT+AGG - chr4_4:43927699-43927718 Msa0682420:CDS 40.0%
ATCATGGATAGTACTGCGAT+CGG + chr4_4:43927741-43927760 None:intergenic 40.0%
ATATCAGGTTTAACTGGTGC+AGG - chr4_4:43927843-43927862 Msa0682420:CDS 40.0%
!! TGATCTCTTTTGAAGGTGGA+AGG + chr4_4:43928019-43928038 None:intergenic 40.0%
TTCTCAGCAAACCTAAGACT+TGG + chr4_4:43928104-43928123 None:intergenic 40.0%
TGAAGCAACTGATGACATGA+AGG + chr4_4:43926384-43926403 None:intergenic 40.0%
AATTTGGCTGTGGTATCAGT+TGG + chr4_4:43926416-43926435 None:intergenic 40.0%
! TGGTAATGCAAATTTGGCTG+TGG + chr4_4:43926426-43926445 None:intergenic 40.0%
AATGGAAGGTTCTCATGTGA+GGG + chr4_4:43926499-43926518 None:intergenic 40.0%
AAATGGAAGGTTCTCATGTG+AGG + chr4_4:43926500-43926519 None:intergenic 40.0%
! CATCGGATTTTGTGAGGTTA+AGG + chr4_4:43926598-43926617 None:intergenic 40.0%
AACCTCACAAAATCCGATGT+TGG - chr4_4:43926599-43926618 Msa0682420:CDS 40.0%
! TACCAACATCGGATTTTGTG+AGG + chr4_4:43926604-43926623 None:intergenic 40.0%
GGTGCAATTTGTGACCTATT+AGG - chr4_4:43926674-43926693 Msa0682420:CDS 40.0%
AACCATAACGTGGACCTAAT+AGG + chr4_4:43926691-43926710 None:intergenic 40.0%
!! TTGGTGCTGTTAGCATGATA+AGG + chr4_4:43926721-43926740 None:intergenic 40.0%
! CAAAGGCATAATAAGCTGAG+TGG + chr4_4:43926924-43926943 None:intergenic 40.0%
CACTCAGCTTATTATGCCTT+TGG - chr4_4:43926922-43926941 Msa0682420:CDS 40.0%
!!! TTGCCTTTTTTATCCCTGGT+TGG - chr4_4:43926996-43927015 Msa0682420:intron 40.0%
CAACCAACCAGGGATAAAAA+AGG + chr4_4:43927002-43927021 None:intergenic 40.0%
TGATAACATGCAACCAACCA+GGG + chr4_4:43927012-43927031 None:intergenic 40.0%
ATGATAACATGCAACCAACC+AGG + chr4_4:43927013-43927032 None:intergenic 40.0%
! TGGTTGGTTGCATGTTATCA+TGG - chr4_4:43927012-43927031 Msa0682420:intron 40.0%
! GGTTGGTTGCATGTTATCAT+GGG - chr4_4:43927013-43927032 Msa0682420:intron 40.0%
GATTTACCTGATGGTAACCT+TGG - chr4_4:43927061-43927080 Msa0682420:intron 40.0%
TTAAATTGCAACCGCAGTTG+CGG - chr4_4:43927401-43927420 Msa0682420:CDS 40.0%
AACATAGTTGCTCGTCCTTT+CGG - chr4_4:43927594-43927613 Msa0682420:CDS 40.0%
TATGCAGAAAACTCCTCCTA+GGG + chr4_4:43927694-43927713 None:intergenic 40.0%
ATATGCAGAAAACTCCTCCT+AGG + chr4_4:43927695-43927714 None:intergenic 40.0%
! TAGGAGGAGTTTTCTGCATA+TGG - chr4_4:43927694-43927713 Msa0682420:CDS 40.0%
! GGAGTTTTCTGCATATGGTT+AGG - chr4_4:43927699-43927718 Msa0682420:CDS 40.0%
ATCATGGATAGTACTGCGAT+CGG + chr4_4:43927741-43927760 None:intergenic 40.0%
ATATCAGGTTTAACTGGTGC+AGG - chr4_4:43927843-43927862 Msa0682420:CDS 40.0%
!! TGATCTCTTTTGAAGGTGGA+AGG + chr4_4:43928019-43928038 None:intergenic 40.0%
TTCTCAGCAAACCTAAGACT+TGG + chr4_4:43928104-43928123 None:intergenic 40.0%
TCTTCCAGTTACTCCATGCA+TGG + chr4_4:43926354-43926373 None:intergenic 45.0%
GTCATCAGTTGCTTCACCAA+TGG - chr4_4:43926388-43926407 Msa0682420:CDS 45.0%
GTGGTATCAGTTGGAACCAT+TGG + chr4_4:43926407-43926426 None:intergenic 45.0%
CACCATTAGTCCCTATCATC+CGG - chr4_4:43926567-43926586 Msa0682420:CDS 45.0%
ACCATTAGTCCCTATCATCC+GGG - chr4_4:43926568-43926587 Msa0682420:CDS 45.0%
TAAGGTTGTCCCGGATGATA+GGG + chr4_4:43926580-43926599 None:intergenic 45.0%
TTAAGGTTGTCCCGGATGAT+AGG + chr4_4:43926581-43926600 None:intergenic 45.0%
TTGTGAGGTTAAGGTTGTCC+CGG + chr4_4:43926589-43926608 None:intergenic 45.0%
!! AAATCCGATGTTGGTAACGC+CGG - chr4_4:43926608-43926627 Msa0682420:CDS 45.0%
GACCTATTAGGTCCACGTTA+TGG - chr4_4:43926686-43926705 Msa0682420:CDS 45.0%
! AGGAAAGCACAACCATAACG+TGG + chr4_4:43926701-43926720 None:intergenic 45.0%
CTTGTTAATGGTACTGCTGC+TGG - chr4_4:43926875-43926894 Msa0682420:CDS 45.0%
TTAATGGTACTGCTGCTGGT+TGG - chr4_4:43926879-43926898 Msa0682420:CDS 45.0%
! TAATGGTACTGCTGCTGGTT+GGG - chr4_4:43926880-43926899 Msa0682420:CDS 45.0%
GCAATTCTCCAAGCAGTGAA+AGG + chr4_4:43926980-43926999 None:intergenic 45.0%
! AAAGCACCAAGGTTACCATC+AGG + chr4_4:43927070-43927089 None:intergenic 45.0%
!! CTTGGTGCTTTGCAGAAGAA+GGG - chr4_4:43927079-43927098 Msa0682420:intron 45.0%
CTCAGCAATGACATTGTCAG+TGG + chr4_4:43927303-43927322 None:intergenic 45.0%
TAAATTGTGGTCCGCAACTG+CGG + chr4_4:43927415-43927434 None:intergenic 45.0%
AACCTAAAGCTACACACAGC+TGG - chr4_4:43927543-43927562 Msa0682420:CDS 45.0%
TTCCAGCTGTGTGTAGCTTT+AGG + chr4_4:43927548-43927567 None:intergenic 45.0%
GGAATCATTGCTGCATCCTT+TGG - chr4_4:43927564-43927583 Msa0682420:CDS 45.0%
! CATTGCTGCATCCTTTGGAA+TGG - chr4_4:43927569-43927588 Msa0682420:CDS 45.0%
TCTGATGCATATCCTCCGAA+AGG + chr4_4:43927612-43927631 None:intergenic 45.0%
AGAAAACTCCTCCTAGGGTT+TGG + chr4_4:43927689-43927708 None:intergenic 45.0%
TCCATGATCCTCTTCTCAGT+TGG - chr4_4:43927753-43927772 Msa0682420:CDS 45.0%
TCCAACTGAGAAGAGGATCA+TGG + chr4_4:43927757-43927776 None:intergenic 45.0%
CAACAGCTTCAGGTCTTTCA+TGG - chr4_4:43927922-43927941 Msa0682420:CDS 45.0%
AGCTTCAGGTCTTTCATGGA+TGG - chr4_4:43927926-43927945 Msa0682420:CDS 45.0%
GCTTCAGGTCTTTCATGGAT+GGG - chr4_4:43927927-43927946 Msa0682420:CDS 45.0%
TGGATGGGTGCAATGATTGT+TGG - chr4_4:43927942-43927961 Msa0682420:CDS 45.0%
!! GAGAATAGTCGTTCTGAGAG+AGG - chr4_4:43928119-43928138 Msa0682420:CDS 45.0%
! TTCTGAGAGAGGAAAACGTG+TGG - chr4_4:43928130-43928149 Msa0682420:CDS 45.0%
TGGGTAGGAGTTGTATTTGG+TGG + chr4_4:43928170-43928189 None:intergenic 45.0%
TCTTCCAGTTACTCCATGCA+TGG + chr4_4:43926354-43926373 None:intergenic 45.0%
GTCATCAGTTGCTTCACCAA+TGG - chr4_4:43926388-43926407 Msa0682420:CDS 45.0%
GTGGTATCAGTTGGAACCAT+TGG + chr4_4:43926407-43926426 None:intergenic 45.0%
CACCATTAGTCCCTATCATC+CGG - chr4_4:43926567-43926586 Msa0682420:CDS 45.0%
ACCATTAGTCCCTATCATCC+GGG - chr4_4:43926568-43926587 Msa0682420:CDS 45.0%
TAAGGTTGTCCCGGATGATA+GGG + chr4_4:43926580-43926599 None:intergenic 45.0%
TTAAGGTTGTCCCGGATGAT+AGG + chr4_4:43926581-43926600 None:intergenic 45.0%
TTGTGAGGTTAAGGTTGTCC+CGG + chr4_4:43926589-43926608 None:intergenic 45.0%
!! AAATCCGATGTTGGTAACGC+CGG - chr4_4:43926608-43926627 Msa0682420:CDS 45.0%
GACCTATTAGGTCCACGTTA+TGG - chr4_4:43926686-43926705 Msa0682420:CDS 45.0%
! AGGAAAGCACAACCATAACG+TGG + chr4_4:43926701-43926720 None:intergenic 45.0%
CTTGTTAATGGTACTGCTGC+TGG - chr4_4:43926875-43926894 Msa0682420:CDS 45.0%
TTAATGGTACTGCTGCTGGT+TGG - chr4_4:43926879-43926898 Msa0682420:CDS 45.0%
! TAATGGTACTGCTGCTGGTT+GGG - chr4_4:43926880-43926899 Msa0682420:CDS 45.0%
GCAATTCTCCAAGCAGTGAA+AGG + chr4_4:43926980-43926999 None:intergenic 45.0%
! AAAGCACCAAGGTTACCATC+AGG + chr4_4:43927070-43927089 None:intergenic 45.0%
!! CTTGGTGCTTTGCAGAAGAA+GGG - chr4_4:43927079-43927098 Msa0682420:intron 45.0%
CTCAGCAATGACATTGTCAG+TGG + chr4_4:43927303-43927322 None:intergenic 45.0%
TAAATTGTGGTCCGCAACTG+CGG + chr4_4:43927415-43927434 None:intergenic 45.0%
AACCTAAAGCTACACACAGC+TGG - chr4_4:43927543-43927562 Msa0682420:CDS 45.0%
TTCCAGCTGTGTGTAGCTTT+AGG + chr4_4:43927548-43927567 None:intergenic 45.0%
GGAATCATTGCTGCATCCTT+TGG - chr4_4:43927564-43927583 Msa0682420:CDS 45.0%
! CATTGCTGCATCCTTTGGAA+TGG - chr4_4:43927569-43927588 Msa0682420:CDS 45.0%
TCTGATGCATATCCTCCGAA+AGG + chr4_4:43927612-43927631 None:intergenic 45.0%
AGAAAACTCCTCCTAGGGTT+TGG + chr4_4:43927689-43927708 None:intergenic 45.0%
TCCATGATCCTCTTCTCAGT+TGG - chr4_4:43927753-43927772 Msa0682420:CDS 45.0%
TCCAACTGAGAAGAGGATCA+TGG + chr4_4:43927757-43927776 None:intergenic 45.0%
CAACAGCTTCAGGTCTTTCA+TGG - chr4_4:43927922-43927941 Msa0682420:CDS 45.0%
AGCTTCAGGTCTTTCATGGA+TGG - chr4_4:43927926-43927945 Msa0682420:CDS 45.0%
GCTTCAGGTCTTTCATGGAT+GGG - chr4_4:43927927-43927946 Msa0682420:CDS 45.0%
TGGATGGGTGCAATGATTGT+TGG - chr4_4:43927942-43927961 Msa0682420:CDS 45.0%
!! GAGAATAGTCGTTCTGAGAG+AGG - chr4_4:43928119-43928138 Msa0682420:CDS 45.0%
! TTCTGAGAGAGGAAAACGTG+TGG - chr4_4:43928130-43928149 Msa0682420:CDS 45.0%
TGGGTAGGAGTTGTATTTGG+TGG + chr4_4:43928170-43928189 None:intergenic 45.0%
GCTGATATTGAGGGTTCACC+AGG - chr4_4:43926323-43926342 Msa0682420:CDS 50.0%
AGCTCCATGCATGGAGTAAC+TGG - chr4_4:43926347-43926366 Msa0682420:CDS 50.0%
TGCGAATGTCGAGACGAAAC+AGG + chr4_4:43926543-43926562 None:intergenic 50.0%
TCCCGGATGATAGGGACTAA+TGG + chr4_4:43926572-43926591 None:intergenic 50.0%
! AATGGTACTGCTGCTGGTTG+GGG - chr4_4:43926881-43926900 Msa0682420:CDS 50.0%
! TGCTGCTGGTTGGGGTAATA+TGG - chr4_4:43926889-43926908 Msa0682420:CDS 50.0%
! GCTGCTGGTTGGGGTAATAT+GGG - chr4_4:43926890-43926909 Msa0682420:CDS 50.0%
GTTGGGGTAATATGGGTGGT+GGG - chr4_4:43926897-43926916 Msa0682420:CDS 50.0%
TTGGGGTAATATGGGTGGTG+GGG - chr4_4:43926898-43926917 Msa0682420:CDS 50.0%
! GTGCTACTCCTTTCACTGCT+TGG - chr4_4:43926969-43926988 Msa0682420:intron 50.0%
! CCTTCTTCTGCAAAGCACCA+AGG + chr4_4:43927081-43927100 None:intergenic 50.0%
!! CCTTGGTGCTTTGCAGAAGA+AGG - chr4_4:43927078-43927097 Msa0682420:intron 50.0%
ATAGTTGCTCGTCCTTTCGG+AGG - chr4_4:43927597-43927616 Msa0682420:CDS 50.0%
GCAAGATTATTCGGCATGCG+AGG - chr4_4:43927639-43927658 Msa0682420:CDS 50.0%
GATTATTCGGCATGCGAGGA+AGG - chr4_4:43927643-43927662 Msa0682420:CDS 50.0%
CTCTGGATCTTCCAAACCCT+AGG - chr4_4:43927675-43927694 Msa0682420:CDS 50.0%
TGGATCTTCCAAACCCTAGG+AGG - chr4_4:43927678-43927697 Msa0682420:CDS 50.0%
CTTGTGCTCCAACTGAGAAG+AGG + chr4_4:43927764-43927783 None:intergenic 50.0%
GCTGCATGTGGTGCAACATT+TGG - chr4_4:43927783-43927802 Msa0682420:CDS 50.0%
TCAGGTTTAACTGGTGCAGG+TGG - chr4_4:43927846-43927865 Msa0682420:CDS 50.0%
ACTGGTGCAGGTGGAAACTT+TGG - chr4_4:43927855-43927874 Msa0682420:CDS 50.0%
! GCAGGTGGAAACTTTGGTTC+TGG - chr4_4:43927861-43927880 Msa0682420:CDS 50.0%
GGTTGCATCAGCCAAGTCTT+AGG - chr4_4:43928090-43928109 Msa0682420:CDS 50.0%
GCTGATATTGAGGGTTCACC+AGG - chr4_4:43926323-43926342 Msa0682420:CDS 50.0%
AGCTCCATGCATGGAGTAAC+TGG - chr4_4:43926347-43926366 Msa0682420:CDS 50.0%
TGCGAATGTCGAGACGAAAC+AGG + chr4_4:43926543-43926562 None:intergenic 50.0%
TCCCGGATGATAGGGACTAA+TGG + chr4_4:43926572-43926591 None:intergenic 50.0%
! AATGGTACTGCTGCTGGTTG+GGG - chr4_4:43926881-43926900 Msa0682420:CDS 50.0%
! TGCTGCTGGTTGGGGTAATA+TGG - chr4_4:43926889-43926908 Msa0682420:CDS 50.0%
! GCTGCTGGTTGGGGTAATAT+GGG - chr4_4:43926890-43926909 Msa0682420:CDS 50.0%
GTTGGGGTAATATGGGTGGT+GGG - chr4_4:43926897-43926916 Msa0682420:CDS 50.0%
TTGGGGTAATATGGGTGGTG+GGG - chr4_4:43926898-43926917 Msa0682420:CDS 50.0%
! GTGCTACTCCTTTCACTGCT+TGG - chr4_4:43926969-43926988 Msa0682420:intron 50.0%
! CCTTCTTCTGCAAAGCACCA+AGG + chr4_4:43927081-43927100 None:intergenic 50.0%
!! CCTTGGTGCTTTGCAGAAGA+AGG - chr4_4:43927078-43927097 Msa0682420:intron 50.0%
ATAGTTGCTCGTCCTTTCGG+AGG - chr4_4:43927597-43927616 Msa0682420:CDS 50.0%
GCAAGATTATTCGGCATGCG+AGG - chr4_4:43927639-43927658 Msa0682420:CDS 50.0%
GATTATTCGGCATGCGAGGA+AGG - chr4_4:43927643-43927662 Msa0682420:CDS 50.0%
CTCTGGATCTTCCAAACCCT+AGG - chr4_4:43927675-43927694 Msa0682420:CDS 50.0%
TGGATCTTCCAAACCCTAGG+AGG - chr4_4:43927678-43927697 Msa0682420:CDS 50.0%
CTTGTGCTCCAACTGAGAAG+AGG + chr4_4:43927764-43927783 None:intergenic 50.0%
GCTGCATGTGGTGCAACATT+TGG - chr4_4:43927783-43927802 Msa0682420:CDS 50.0%
TCAGGTTTAACTGGTGCAGG+TGG - chr4_4:43927846-43927865 Msa0682420:CDS 50.0%
ACTGGTGCAGGTGGAAACTT+TGG - chr4_4:43927855-43927874 Msa0682420:CDS 50.0%
! GCAGGTGGAAACTTTGGTTC+TGG - chr4_4:43927861-43927880 Msa0682420:CDS 50.0%
GGTTGCATCAGCCAAGTCTT+AGG - chr4_4:43928090-43928109 Msa0682420:CDS 50.0%
TCACCAGGAAGCTCCATGCA+TGG - chr4_4:43926338-43926357 Msa0682420:CDS 55.0%
ACTCCATGCATGGAGCTTCC+TGG + chr4_4:43926344-43926363 None:intergenic 55.0%
GACTCCGGCGTTACCAACAT+CGG + chr4_4:43926615-43926634 None:intergenic 55.0%
ACCTGAAACCGAAGCGACTC+CGG + chr4_4:43926630-43926649 None:intergenic 55.0%
GCTGGTTGGGGTAATATGGG+TGG - chr4_4:43926893-43926912 Msa0682420:CDS 55.0%
GGTTGGGGTAATATGGGTGG+TGG - chr4_4:43926896-43926915 Msa0682420:CDS 55.0%
GAGGAAGGCTATGGACACTC+TGG - chr4_4:43927658-43927677 Msa0682420:CDS 55.0%
GTTGGAGCACAAGCTGCATG+TGG - chr4_4:43927771-43927790 Msa0682420:CDS 55.0%
AGGAACATGCTACCCCACTG+TGG + chr4_4:43927999-43928018 None:intergenic 55.0%
TCACCAGGAAGCTCCATGCA+TGG - chr4_4:43926338-43926357 Msa0682420:CDS 55.0%
ACTCCATGCATGGAGCTTCC+TGG + chr4_4:43926344-43926363 None:intergenic 55.0%
GACTCCGGCGTTACCAACAT+CGG + chr4_4:43926615-43926634 None:intergenic 55.0%
ACCTGAAACCGAAGCGACTC+CGG + chr4_4:43926630-43926649 None:intergenic 55.0%
GCTGGTTGGGGTAATATGGG+TGG - chr4_4:43926893-43926912 Msa0682420:CDS 55.0%
GGTTGGGGTAATATGGGTGG+TGG - chr4_4:43926896-43926915 Msa0682420:CDS 55.0%
GAGGAAGGCTATGGACACTC+TGG - chr4_4:43927658-43927677 Msa0682420:CDS 55.0%
GTTGGAGCACAAGCTGCATG+TGG - chr4_4:43927771-43927790 Msa0682420:CDS 55.0%
AGGAACATGCTACCCCACTG+TGG + chr4_4:43927999-43928018 None:intergenic 55.0%
! TGGTAACGCCGGAGTCGCTT+CGG - chr4_4:43926619-43926638 Msa0682420:CDS 60.0%
TCGGCATGCGAGGAAGGCTA+TGG - chr4_4:43927649-43927668 Msa0682420:CDS 60.0%
! TGGTAACGCCGGAGTCGCTT+CGG - chr4_4:43926619-43926638 Msa0682420:CDS 60.0%
TCGGCATGCGAGGAAGGCTA+TGG - chr4_4:43927649-43927668 Msa0682420:CDS 60.0%
GCCGGAGTCGCTTCGGTTTC+AGG - chr4_4:43926626-43926645 Msa0682420:CDS 65.0%
GCCGGAGTCGCTTCGGTTTC+AGG - chr4_4:43926626-43926645 Msa0682420:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 43926320 43928193 43926320 ID=Msa0682420;Name=Msa0682420
chr4_4 mRNA 43926320 43928193 43926320 ID=Msa0682420-mRNA-1;Parent=Msa0682420;Name=Msa0682420-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|526
chr4_4 exon 43927384 43928193 43927384 ID=Msa0682420-mRNA-1:exon:10645;Parent=Msa0682420-mRNA-1
chr4_4 exon 43927177 43927292 43927177 ID=Msa0682420-mRNA-1:exon:10644;Parent=Msa0682420-mRNA-1
chr4_4 exon 43926320 43926974 43926320 ID=Msa0682420-mRNA-1:exon:10643;Parent=Msa0682420-mRNA-1
chr4_4 CDS 43927384 43928193 43927384 ID=Msa0682420-mRNA-1:cds;Parent=Msa0682420-mRNA-1
chr4_4 CDS 43927177 43927292 43927177 ID=Msa0682420-mRNA-1:cds;Parent=Msa0682420-mRNA-1
chr4_4 CDS 43926320 43926974 43926320 ID=Msa0682420-mRNA-1:cds;Parent=Msa0682420-mRNA-1
Gene Sequence

>Msa0682420

ATGGCTGATATTGAGGGTTCACCAGGAAGCTCCATGCATGGAGTAACTGGAAGAGAACAAACCTTCATGTCATCAGTTGCTTCACCAATGGTTCCAACTGATACCACAGCCAAATTTGCATTACCAGTTGATTCTGAACACAAATCCAAAGTTTTCAAACTCTTTTCAATGGCTAACCCTCACATGAGAACCTTCCATTTATCATGGATATCTTTCTTCACCTGTTTCGTCTCGACATTCGCAGCAGCACCATTAGTCCCTATCATCCGGGACAACCTTAACCTCACAAAATCCGATGTTGGTAACGCCGGAGTCGCTTCGGTTTCAGGTAGTATTTTCTCAAGGCTTGCAATGGGTGCAATTTGTGACCTATTAGGTCCACGTTATGGTTGTGCTTTCCTTATCATGCTAACAGCACCAACAGTGTTTTGTATGTCATTTGTTGAAAATGCTTCTGGTTATATAGCAGTTAGGTTTATGATTGGTTTCTCTTTGGCAACATTTGTTTCATGCCAATATTGGATGAGTACTATGTTTAATAGTAAAATTATTGGACTTGTTAATGGTACTGCTGCTGGTTGGGGTAATATGGGTGGTGGGGCCACTCAGCTTATTATGCCTTTGGTGTATGAGTTGATTAGAAGAGCTGGTGCTACTCCTTTCACTGCTTGGAGAATTGCCTTTTTTATCCCTGGTTGGTTGCATGTTATCATGGGTATTTTGGTCTTAACATTAGGTCAAGATTTACCTGATGGTAACCTTGGTGCTTTGCAGAAGAAGGGTAATGTTGCTAAAGACAAGTTCACAAAAGTGCTGTGGTATGCTATAACAAATTACAGGACATGGATTTTTGCCCTACTTTATGGTTACTCTATGGGAGTTGAATTGACCACTGACAATGTCATTGCTGAGTATTTCTATGACAGGTTTAACCTAAAGCTACACACAGCTGGAATCATTGCTGCATCCTTTGGAATGGCAAACATAGTTGCTCGTCCTTTCGGAGGATATGCATCAGATGTAGCAGCAAGATTATTCGGCATGCGAGGAAGGCTATGGACACTCTGGATCTTCCAAACCCTAGGAGGAGTTTTCTGCATATGGTTAGGACGTGCGAATACACTTCCGATCGCAGTACTATCCATGATCCTCTTCTCAGTTGGAGCACAAGCTGCATGTGGTGCAACATTTGGAATCATTCCATTCATATCAAGAAGATCTTTGGGAATTATATCAGGTTTAACTGGTGCAGGTGGAAACTTTGGTTCTGGATTAACACAGTTGATATTTTTTTCAAGCTCAAAATTTTCAACAGCTTCAGGTCTTTCATGGATGGGTGCAATGATTGTTGGTTGTACACTTCCTGTTGCATTTGTTCATTTTCCACAGTGGGGTAGCATGTTCCTTCCACCTTCAAAAGAGATCAATGAAGAACACTATTACACTTCTGAATGGAATGAAGATGAAGTACAGAAAGGGTTGCATCAGCCAAGTCTTAGGTTTGCTGAGAATAGTCGTTCTGAGAGAGGAAAACGTGTGGCTTCTGCAGCAACACCACCAAATACAACTCCTACCCATTAG

Protein sequence

>Msa0682420

MADIEGSPGSSMHGVTGREQTFMSSVASPMVPTDTTAKFALPVDSEHKSKVFKLFSMANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDVGNAGVASVSGSIFSRLAMGAICDLLGPRYGCAFLIMLTAPTVFCMSFVENASGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLGALQKKGNVAKDKFTKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANIVARPFGGYASDVAARLFGMRGRLWTLWIFQTLGGVFCIWLGRANTLPIAVLSMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSSSKFSTASGLSWMGAMIVGCTLPVAFVHFPQWGSMFLPPSKEINEEHYYTSEWNEDEVQKGLHQPSLRFAENSRSERGKRVASAATPPNTTPTH*