Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0682420 | XP_013455974.2 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1070 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0682420 | sp|O82811|NRT21_ARATH | 78.828 | 529 | 109 | 1 | 1 | 526 | 1 | 529 | 0.0 | 881 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0682420 | G7IRD1 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1070 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004180 | Msa0682420 | -0.800162 | 1.640362e-48 | -8.615850e-47 |
Msa0010150 | Msa0682420 | 0.809184 | 2.145171e-50 | -8.615850e-47 |
Msa0011040 | Msa0682420 | 0.803657 | 3.140335e-49 | -8.615850e-47 |
Msa0014590 | Msa0682420 | 0.819882 | 9.196319e-53 | -8.615850e-47 |
Msa0027860 | Msa0682420 | 0.809252 | 2.073752e-50 | -8.615850e-47 |
Msa0028940 | Msa0682420 | -0.800559 | 1.361820e-48 | -8.615850e-47 |
Msa0030710 | Msa0682420 | -0.808294 | 3.323808e-50 | -8.615850e-47 |
Msa0033190 | Msa0682420 | -0.802829 | 4.658902e-49 | -8.615850e-47 |
Msa0040210 | Msa0682420 | 0.807145 | 5.832293e-50 | -8.615850e-47 |
Msa0047400 | Msa0682420 | -0.810982 | 8.790750e-51 | -8.615850e-47 |
Msa0048380 | Msa0682420 | 0.802464 | 5.541998e-49 | -8.615850e-47 |
Msa0054110 | Msa0682420 | -0.800907 | 1.156178e-48 | -8.615850e-47 |
Msa0063540 | Msa0682420 | 0.807244 | 5.556781e-50 | -8.615850e-47 |
Msa0065190 | Msa0682420 | -0.808185 | 3.506453e-50 | -8.615850e-47 |
Msa0067820 | Msa0682420 | -0.805106 | 1.566887e-49 | -8.615850e-47 |
Msa0074620 | Msa0682420 | 0.807151 | 5.814431e-50 | -8.615850e-47 |
Msa0079840 | Msa0682420 | -0.802012 | 6.866475e-49 | -8.615850e-47 |
Msa0080100 | Msa0682420 | -0.802043 | 6.764275e-49 | -8.615850e-47 |
Msa0081300 | Msa0682420 | -0.802476 | 5.510727e-49 | -8.615850e-47 |
Msa0085110 | Msa0682420 | 0.805338 | 1.401024e-49 | -8.615850e-47 |
Msa0087900 | Msa0682420 | 0.811445 | 6.976589e-51 | -8.615850e-47 |
Msa0093530 | Msa0682420 | 0.819047 | 1.425514e-52 | -8.615850e-47 |
Msa0095910 | Msa0682420 | 0.822431 | 2.378099e-53 | -8.615850e-47 |
Msa0097490 | Msa0682420 | -0.816642 | 4.976928e-52 | -8.615850e-47 |
Msa0107830 | Msa0682420 | 0.835534 | 1.586478e-56 | -8.615850e-47 |
Msa0117650 | Msa0682420 | 0.803802 | 2.929013e-49 | -8.615850e-47 |
Msa0604280 | Msa0682420 | 0.812683 | 3.747791e-51 | -8.615850e-47 |
Msa0610190 | Msa0682420 | 0.800697 | 1.276422e-48 | -8.615850e-47 |
Msa0624260 | Msa0682420 | -0.802949 | 4.401136e-49 | -8.615850e-47 |
Msa0624360 | Msa0682420 | -0.805133 | 1.546354e-49 | -8.615850e-47 |
Msa0628200 | Msa0682420 | 0.826210 | 3.073685e-54 | -8.615850e-47 |
Msa0629040 | Msa0682420 | 0.814050 | 1.876427e-51 | -8.615850e-47 |
Msa0630130 | Msa0682420 | 0.828357 | 9.401631e-55 | -8.615850e-47 |
Msa0633070 | Msa0682420 | 0.821192 | 4.601121e-53 | -8.615850e-47 |
Msa0633940 | Msa0682420 | 0.801834 | 7.468630e-49 | -8.615850e-47 |
Msa0634290 | Msa0682420 | 0.837657 | 4.568187e-57 | -8.615850e-47 |
Msa0634900 | Msa0682420 | -0.804798 | 1.817434e-49 | -8.615850e-47 |
Msa0637700 | Msa0682420 | 0.802411 | 5.681675e-49 | -8.615850e-47 |
Msa0639400 | Msa0682420 | 0.940635 | 1.663796e-100 | -8.615850e-47 |
Msa0639410 | Msa0682420 | 0.913413 | 6.335810e-84 | -8.615850e-47 |
Msa0640290 | Msa0682420 | 0.811949 | 5.418727e-51 | -8.615850e-47 |
Msa0657260 | Msa0682420 | 0.804753 | 1.856765e-49 | -8.615850e-47 |
Msa0668210 | Msa0682420 | 0.802130 | 6.490678e-49 | -8.615850e-47 |
Msa0668220 | Msa0682420 | 0.853206 | 2.785294e-61 | -8.615850e-47 |
Msa0668230 | Msa0682420 | 0.822387 | 2.434392e-53 | -8.615850e-47 |
Msa0670360 | Msa0682420 | 0.800485 | 1.409583e-48 | -8.615850e-47 |
Msa0671490 | Msa0682420 | 0.805197 | 1.499166e-49 | -8.615850e-47 |
Msa0671640 | Msa0682420 | 0.811708 | 6.115739e-51 | -8.615850e-47 |
Msa0678620 | Msa0682420 | 0.804020 | 2.639662e-49 | -8.615850e-47 |
Msa0682410 | Msa0682420 | 0.906991 | 8.200756e-81 | -8.615850e-47 |
Msa0682420 | Msa0685080 | 0.824259 | 8.894880e-54 | -8.615850e-47 |
Msa0682420 | Msa0699170 | 0.800761 | 1.238697e-48 | -8.615850e-47 |
Msa0682420 | Msa0701490 | 0.804749 | 1.860382e-49 | -8.615850e-47 |
Msa0682420 | Msa0701560 | 0.803358 | 3.621572e-49 | -8.615850e-47 |
Msa0682420 | Msa0715210 | 0.811793 | 5.861776e-51 | -8.615850e-47 |
Msa0682420 | Msa0718770 | 0.814434 | 1.544094e-51 | -8.615850e-47 |
Msa0682420 | Msa0721260 | 0.808275 | 3.354506e-50 | -8.615850e-47 |
Msa0682420 | Msa0727230 | 0.803882 | 2.820124e-49 | -8.615850e-47 |
Msa0682420 | Msa0727480 | 0.807390 | 5.174871e-50 | -8.615850e-47 |
Msa0682420 | Msa0728520 | 0.838821 | 2.290508e-57 | -8.615850e-47 |
Msa0682420 | Msa0732040 | 0.805510 | 1.289311e-49 | -8.615850e-47 |
Msa0682420 | Msa0738570 | 0.802740 | 4.860699e-49 | -8.615850e-47 |
Msa0682420 | Msa0741360 | 0.800200 | 1.611175e-48 | -8.615850e-47 |
Msa0682420 | Msa0744550 | 0.804087 | 2.555772e-49 | -8.615850e-47 |
Msa0682420 | Msa0751960 | 0.813768 | 2.166007e-51 | -8.615850e-47 |
Msa0682420 | Msa0753410 | 0.800760 | 1.239277e-48 | -8.615850e-47 |
Msa0682420 | Msa0754530 | 0.824077 | 9.812187e-54 | -8.615850e-47 |
Msa0682420 | Msa0757120 | 0.833584 | 4.904748e-56 | -8.615850e-47 |
Msa0682420 | Msa0776540 | 0.841220 | 5.423635e-58 | -8.615850e-47 |
Msa0682420 | Msa0777070 | 0.815082 | 1.109131e-51 | -8.615850e-47 |
Msa0682420 | Msa0777600 | 0.814177 | 1.759444e-51 | -8.615850e-47 |
Msa0682420 | Msa0787860 | 0.839518 | 1.510612e-57 | -8.615850e-47 |
Msa0682420 | Msa0792330 | 0.828219 | 1.015211e-54 | -8.615850e-47 |
Msa0682420 | Msa0792410 | 0.803338 | 3.656036e-49 | -8.615850e-47 |
Msa0682420 | Msa0795320 | 0.808048 | 3.749631e-50 | -8.615850e-47 |
Msa0682420 | Msa0795330 | 0.804467 | 2.130271e-49 | -8.615850e-47 |
Msa0682420 | Msa0798150 | 0.808233 | 3.424192e-50 | -8.615850e-47 |
Msa0682420 | Msa0802600 | 0.817552 | 3.108103e-52 | -8.615850e-47 |
Msa0682420 | Msa0806930 | 0.806246 | 9.029840e-50 | -8.615850e-47 |
Msa0682420 | Msa0814160 | 0.815535 | 8.798428e-52 | -8.615850e-47 |
Msa0682420 | Msa0816140 | 0.842630 | 2.299586e-58 | -8.615850e-47 |
Msa0682420 | Msa0824850 | 0.838194 | 3.324223e-57 | -8.615850e-47 |
Msa0682420 | Msa0824860 | 0.808104 | 3.649243e-50 | -8.615850e-47 |
Msa0682420 | Msa0827800 | 0.831857 | 1.316236e-55 | -8.615850e-47 |
Msa0682420 | Msa0831890 | 0.809942 | 1.474573e-50 | -8.615850e-47 |
Msa0682420 | Msa0833230 | 0.832956 | 7.032655e-56 | -8.615850e-47 |
Msa0682420 | Msa0854840 | 0.816161 | 6.378169e-52 | -8.615850e-47 |
Msa0682420 | Msa0855260 | 0.808950 | 2.407816e-50 | -8.615850e-47 |
Msa0682420 | Msa0863840 | 0.810527 | 1.102584e-50 | -8.615850e-47 |
Msa0682420 | Msa0863850 | 0.813689 | 2.254085e-51 | -8.615850e-47 |
Msa0682420 | Msa0863860 | 0.829951 | 3.862460e-55 | -8.615850e-47 |
Msa0682420 | Msa0864160 | 0.834242 | 3.357443e-56 | -8.615850e-47 |
Msa0682420 | Msa0865830 | 0.800314 | 1.527530e-48 | -8.615850e-47 |
Msa0682420 | Msa0867080 | 0.819521 | 1.111968e-52 | -8.615850e-47 |
Msa0682420 | Msa0868820 | 0.812183 | 4.819371e-51 | -8.615850e-47 |
Msa0682420 | Msa0874750 | 0.809932 | 1.481705e-50 | -8.615850e-47 |
Msa0682420 | Msa0896910 | 0.801050 | 1.081108e-48 | -8.615850e-47 |
Msa0682420 | Msa0896920 | 0.859462 | 4.068346e-63 | -8.615850e-47 |
Msa0682420 | Msa0896950 | 0.819806 | 9.569965e-53 | -8.615850e-47 |
Msa0682420 | Msa0902340 | 0.805890 | 1.072805e-49 | -8.615850e-47 |
Msa0682420 | Msa0932900 | 0.835466 | 1.651020e-56 | -8.615850e-47 |
Msa0682420 | Msa0932910 | 0.813705 | 2.235662e-51 | -8.615850e-47 |
Msa0682420 | Msa0932930 | 0.826624 | 2.449752e-54 | -8.615850e-47 |
Msa0682420 | Msa0933580 | 0.803269 | 3.778060e-49 | -8.615850e-47 |
Msa0682420 | Msa0933590 | 0.817065 | 4.000006e-52 | -8.615850e-47 |
Msa0682420 | Msa0933610 | 0.823204 | 1.571297e-53 | -8.615850e-47 |
Msa0682420 | Msa0934800 | -0.813964 | 1.960683e-51 | -8.615850e-47 |
Msa0682420 | Msa0941420 | -0.803030 | 4.233941e-49 | -8.615850e-47 |
Msa0682420 | Msa0956580 | -0.805635 | 1.213477e-49 | -8.615850e-47 |
Msa0682420 | Msa0964510 | 0.830622 | 2.647104e-55 | -8.615850e-47 |
Msa0682420 | Msa0967940 | -0.804741 | 1.867753e-49 | -8.615850e-47 |
Msa0682420 | Msa0970790 | 0.818796 | 1.625783e-52 | -8.615850e-47 |
Msa0682420 | Msa0970820 | 0.820390 | 7.035942e-53 | -8.615850e-47 |
Msa0682420 | Msa0976400 | 0.822748 | 2.007005e-53 | -8.615850e-47 |
Msa0682420 | Msa0996980 | 0.824318 | 8.612233e-54 | -8.615850e-47 |
Msa0682420 | Msa0998780 | 0.800278 | 1.553694e-48 | -8.615850e-47 |
Msa0682420 | Msa1006030 | 0.858308 | 9.009248e-63 | -8.615850e-47 |
Msa0682420 | Msa1006170 | 0.830985 | 2.156782e-55 | -8.615850e-47 |
Msa0682420 | Msa1007930 | 0.803796 | 2.938108e-49 | -8.615850e-47 |
Msa0682420 | Msa1018590 | 0.805942 | 1.046288e-49 | -8.615850e-47 |
Msa0682420 | Msa1022510 | 0.808764 | 2.638715e-50 | -8.615850e-47 |
Msa0682420 | Msa1023430 | 0.810458 | 1.141404e-50 | -8.615850e-47 |
Msa0682420 | Msa1024350 | 0.815760 | 7.835607e-52 | -8.615850e-47 |
Msa0682420 | Msa1024480 | 0.810734 | 9.948718e-51 | -8.615850e-47 |
Msa0682420 | Msa1026050 | 0.805561 | 1.257747e-49 | -8.615850e-47 |
Msa0682420 | Msa1035050 | 0.824107 | 9.653987e-54 | -8.615850e-47 |
Msa0682420 | Msa1037360 | 0.814647 | 1.385058e-51 | -8.615850e-47 |
Msa0682420 | Msa1040030 | -0.806053 | 9.914257e-50 | -8.615850e-47 |
Msa0682420 | Msa1048350 | 0.817769 | 2.777370e-52 | -8.615850e-47 |
Msa0682420 | Msa1048390 | 0.834679 | 2.607794e-56 | -8.615850e-47 |
Msa0682420 | Msa1049400 | 0.802422 | 5.652879e-49 | -8.615850e-47 |
Msa0682420 | Msa1061670 | 0.833659 | 4.697132e-56 | -8.615850e-47 |
Msa0682420 | Msa1061840 | 0.823075 | 1.683219e-53 | -8.615850e-47 |
Msa0682420 | Msa1064940 | 0.849974 | 2.291295e-60 | -8.615850e-47 |
Msa0682420 | Msa1068110 | -0.804579 | 2.018771e-49 | -8.615850e-47 |
Msa0682420 | Msa1075090 | 0.820050 | 8.416067e-53 | -8.615850e-47 |
Msa0682420 | Msa1078120 | -0.804514 | 2.082925e-49 | -8.615850e-47 |
Msa0682420 | Msa1087370 | 0.802791 | 4.743479e-49 | -8.615850e-47 |
Msa0682420 | Msa1087380 | 0.827631 | 1.406317e-54 | -8.615850e-47 |
Msa0682420 | Msa1099640 | 0.805960 | 1.036942e-49 | -8.615850e-47 |
Msa0682420 | Msa1100030 | 0.817289 | 3.563137e-52 | -8.615850e-47 |
Msa0682420 | Msa1100330 | 0.831280 | 1.825381e-55 | -8.615850e-47 |
Msa0682420 | Msa1103450 | 0.816641 | 4.980460e-52 | -8.615850e-47 |
Msa0682420 | Msa1104960 | 0.823304 | 1.488556e-53 | -8.615850e-47 |
Msa0682420 | Msa1106680 | 0.830716 | 2.511529e-55 | -8.615850e-47 |
Msa0682420 | Msa1106960 | 0.828949 | 6.764074e-55 | -8.615850e-47 |
Msa0682420 | Msa1107510 | 0.807616 | 4.633799e-50 | -8.615850e-47 |
Msa0682420 | Msa1109540 | 0.805289 | 1.434193e-49 | -8.615850e-47 |
Msa0682420 | Msa1110040 | 0.805656 | 1.201735e-49 | -8.615850e-47 |
Msa0682420 | Msa1123000 | 0.806299 | 8.800932e-50 | -8.615850e-47 |
Msa0682420 | Msa1138110 | 0.819948 | 8.884188e-53 | -8.615850e-47 |
Msa0682420 | Msa1147030 | 0.819610 | 1.061149e-52 | -8.615850e-47 |
Msa0682420 | Msa1148210 | 0.800840 | 1.193164e-48 | -8.615850e-47 |
Msa0682420 | Msa1150130 | -0.807457 | 5.008447e-50 | -8.615850e-47 |
Msa0682420 | Msa1151070 | 0.812476 | 4.160183e-51 | -8.615850e-47 |
Msa0682420 | Msa1153690 | 0.809819 | 1.566849e-50 | -8.615850e-47 |
Msa0682420 | Msa1156240 | 0.815844 | 7.504939e-52 | -8.615850e-47 |
Msa0682420 | Msa1161390 | -0.801696 | 7.973295e-49 | -8.615850e-47 |
Msa0682420 | Msa1169630 | -0.813405 | 2.602758e-51 | -8.615850e-47 |
Msa0682420 | Msa1170340 | 0.820652 | 6.124578e-53 | -8.615850e-47 |
Msa0682420 | Msa1173290 | 0.802409 | 5.686563e-49 | -8.615850e-47 |
Msa0682420 | Msa1177090 | 0.829050 | 6.393456e-55 | -8.615850e-47 |
Msa0682420 | Msa1177300 | -0.806742 | 7.097007e-50 | -8.615850e-47 |
Msa0682420 | Msa1185270 | 0.807447 | 5.031605e-50 | -8.615850e-47 |
Msa0682420 | Msa1191270 | 0.801028 | 1.092173e-48 | -8.615850e-47 |
Msa0682420 | Msa1203320 | -0.812156 | 4.885340e-51 | -8.615850e-47 |
Msa0682420 | Msa1206330 | 0.827653 | 1.388971e-54 | -8.615850e-47 |
Msa0682420 | Msa1206380 | 0.829047 | 6.405159e-55 | -8.615850e-47 |
Msa0682420 | Msa1208830 | 0.803210 | 3.885894e-49 | -8.615850e-47 |
Msa0682420 | Msa1208910 | 0.813044 | 3.123484e-51 | -8.615850e-47 |
Msa0682420 | Msa1223990 | 0.810313 | 1.226634e-50 | -8.615850e-47 |
Msa0682420 | Msa1239050 | 0.821116 | 4.790071e-53 | -8.615850e-47 |
Msa0682420 | Msa1239190 | 0.807063 | 6.069863e-50 | -8.615850e-47 |
Msa0682420 | Msa1240710 | 0.803949 | 2.730361e-49 | -8.615850e-47 |
Msa0682420 | Msa1263110 | 0.803468 | 3.436184e-49 | -8.615850e-47 |
Msa0682420 | Msa1263120 | 0.809985 | 1.443629e-50 | -8.615850e-47 |
Msa0682420 | Msa1269200 | 0.803582 | 3.254946e-49 | -8.615850e-47 |
Msa0682420 | Msa1292700 | -0.820453 | 6.805215e-53 | -8.615850e-47 |
Msa0682420 | Msa1294020 | 0.800089 | 1.697024e-48 | -8.615850e-47 |
Msa0682420 | Msa1316960 | 0.825327 | 4.979022e-54 | -8.615850e-47 |
Msa0682420 | Msa1317090 | -0.805383 | 1.370716e-49 | -8.615850e-47 |
Msa0682420 | Msa1319760 | 0.819906 | 9.082053e-53 | -8.615850e-47 |
Msa0682420 | Msa1341030 | 0.809968 | 1.455335e-50 | -8.615850e-47 |
Msa0682420 | Msa1350870 | 0.805209 | 1.490521e-49 | -8.615850e-47 |
Msa0682420 | Msa1355330 | 0.817929 | 2.555307e-52 | -8.615850e-47 |
Msa0682420 | Msa1355340 | 0.848988 | 4.314345e-60 | -8.615850e-47 |
Msa0682420 | Msa1357840 | 0.834156 | 3.526574e-56 | -8.615850e-47 |
Msa0682420 | Msa1373560 | 0.801098 | 1.056714e-48 | -8.615850e-47 |
Msa0682420 | Msa1398110 | 0.807475 | 4.963254e-50 | -8.615850e-47 |
Msa0682420 | Msa1398120 | 0.800430 | 1.446907e-48 | -8.615850e-47 |
Msa0682420 | Msa1405040 | -0.811511 | 6.749224e-51 | -8.615850e-47 |
Msa0682420 | Msa1411550 | 0.857709 | 1.357009e-62 | -8.615850e-47 |
Msa0682420 | Msa1412360 | 0.827040 | 1.948795e-54 | -8.615850e-47 |
Msa0682420 | Msa1412750 | -0.812190 | 4.803270e-51 | -8.615850e-47 |
Msa0682420 | Msa1419210 | 0.824623 | 7.301462e-54 | -8.615850e-47 |
Msa0682420 | Msa1419930 | -0.803972 | 2.700266e-49 | -8.615850e-47 |
Msa0682420 | Msa1441300 | 0.810366 | 1.194642e-50 | -8.615850e-47 |
Msa0682420 | Msa1448150 | 0.816793 | 4.604442e-52 | -8.615850e-47 |
Msa0682420 | Msa1453650 | 0.801304 | 9.589239e-49 | -8.615850e-47 |
Msa0682420 | Msa1453890 | 0.802543 | 5.336504e-49 | -8.615850e-47 |
Msa0682420 | Msa1456600 | 0.823502 | 1.338383e-53 | -8.615850e-47 |
Msa0682420 | Msa1458270 | 0.804565 | 2.032734e-49 | -8.615850e-47 |
Msa0682420 | Msa1459610 | 0.803480 | 3.417552e-49 | -8.615850e-47 |
Msa0682420 | Msa1459680 | -0.802763 | 4.807658e-49 | -8.615850e-47 |
Msa0682420 | Msa1462610 | 0.803940 | 2.741976e-49 | -8.615850e-47 |
Msa0124070 | Msa0682420 | -0.805405 | 1.356509e-49 | -8.615850e-47 |
Msa0126960 | Msa0682420 | 0.819554 | 1.092774e-52 | -8.615850e-47 |
Msa0127110 | Msa0682420 | -0.800755 | 1.241835e-48 | -8.615850e-47 |
Msa0129850 | Msa0682420 | 0.821764 | 3.395291e-53 | -8.615850e-47 |
Msa0143640 | Msa0682420 | 0.805653 | 1.203320e-49 | -8.615850e-47 |
Msa0147070 | Msa0682420 | -0.805363 | 1.384277e-49 | -8.615850e-47 |
Msa0150910 | Msa0682420 | 0.808155 | 3.559145e-50 | -8.615850e-47 |
Msa0150920 | Msa0682420 | 0.802974 | 4.348991e-49 | -8.615850e-47 |
Msa0164310 | Msa0682420 | -0.809334 | 1.992197e-50 | -8.615850e-47 |
Msa0177550 | Msa0682420 | 0.816572 | 5.160076e-52 | -8.615850e-47 |
Msa0195190 | Msa0682420 | 0.834439 | 2.995049e-56 | -8.615850e-47 |
Msa0199860 | Msa0682420 | 0.804152 | 2.477781e-49 | -8.615850e-47 |
Msa0207640 | Msa0682420 | 0.828692 | 7.805309e-55 | -8.615850e-47 |
Msa0207930 | Msa0682420 | 0.816271 | 6.026374e-52 | -8.615850e-47 |
Msa0207970 | Msa0682420 | 0.803393 | 3.561477e-49 | -8.615850e-47 |
Msa0212550 | Msa0682420 | 0.805105 | 1.567406e-49 | -8.615850e-47 |
Msa0231180 | Msa0682420 | -0.804752 | 1.857970e-49 | -8.615850e-47 |
Msa0232160 | Msa0682420 | -0.802655 | 5.060670e-49 | -8.615850e-47 |
Msa0364910 | Msa0682420 | -0.800038 | 1.738419e-48 | -8.615850e-47 |
Msa0366510 | Msa0682420 | 0.818059 | 2.388551e-52 | -8.615850e-47 |
Msa0371050 | Msa0682420 | -0.805567 | 1.254501e-49 | -8.615850e-47 |
Msa0390200 | Msa0682420 | 0.831443 | 1.664858e-55 | -8.615850e-47 |
Msa0396700 | Msa0682420 | 0.829073 | 6.313692e-55 | -8.615850e-47 |
Msa0396790 | Msa0682420 | 0.803345 | 3.644157e-49 | -8.615850e-47 |
Msa0404900 | Msa0682420 | -0.813532 | 2.440525e-51 | -8.615850e-47 |
Msa0405210 | Msa0682420 | 0.801091 | 1.060136e-48 | -8.615850e-47 |
Msa0409490 | Msa0682420 | 0.806204 | 9.215782e-50 | -8.615850e-47 |
Msa0414480 | Msa0682420 | 0.812635 | 3.839154e-51 | -8.615850e-47 |
Msa0415010 | Msa0682420 | 0.801694 | 7.979408e-49 | -8.615850e-47 |
Msa0418150 | Msa0682420 | 0.840190 | 1.009404e-57 | -8.615850e-47 |
Msa0418160 | Msa0682420 | 0.840674 | 7.540443e-58 | -8.615850e-47 |
Msa0420890 | Msa0682420 | 0.814173 | 1.763389e-51 | -8.615850e-47 |
Msa0421080 | Msa0682420 | 0.800564 | 1.358536e-48 | -8.615850e-47 |
Msa0444400 | Msa0682420 | 0.809693 | 1.668006e-50 | -8.615850e-47 |
Msa0450920 | Msa0682420 | -0.806452 | 8.171479e-50 | -8.615850e-47 |
Msa0454770 | Msa0682420 | 0.823275 | 1.512079e-53 | -8.615850e-47 |
Msa0464300 | Msa0682420 | 0.832002 | 1.211611e-55 | -8.615850e-47 |
Msa0464310 | Msa0682420 | 0.862804 | 3.908974e-64 | -8.615850e-47 |
Msa0469840 | Msa0682420 | -0.801443 | 8.983002e-49 | -8.615850e-47 |
Msa0480540 | Msa0682420 | 0.802751 | 4.835757e-49 | -8.615850e-47 |
Msa0240580 | Msa0682420 | 0.802807 | 4.709028e-49 | -8.615850e-47 |
Msa0242830 | Msa0682420 | 0.805947 | 1.043816e-49 | -8.615850e-47 |
Msa0245660 | Msa0682420 | 0.816379 | 5.701186e-52 | -8.615850e-47 |
Msa0266640 | Msa0682420 | 0.821439 | 4.034457e-53 | -8.615850e-47 |
Msa0266650 | Msa0682420 | 0.804984 | 1.661249e-49 | -8.615850e-47 |
Msa0269710 | Msa0682420 | 0.806634 | 7.477948e-50 | -8.615850e-47 |
Msa0271700 | Msa0682420 | 0.807021 | 6.194030e-50 | -8.615850e-47 |
Msa0272210 | Msa0682420 | 0.807851 | 4.130024e-50 | -8.615850e-47 |
Msa0274250 | Msa0682420 | 0.815507 | 8.924791e-52 | -8.615850e-47 |
Msa0274260 | Msa0682420 | 0.850236 | 1.934968e-60 | -8.615850e-47 |
Msa0278460 | Msa0682420 | 0.804378 | 2.223526e-49 | -8.615850e-47 |
Msa0278950 | Msa0682420 | 0.816694 | 4.846193e-52 | -8.615850e-47 |
Msa0278960 | Msa0682420 | 0.807491 | 4.926073e-50 | -8.615850e-47 |
Msa0307630 | Msa0682420 | 0.800481 | 1.412679e-48 | -8.615850e-47 |
Msa0316230 | Msa0682420 | 0.815766 | 7.811800e-52 | -8.615850e-47 |
Msa0318370 | Msa0682420 | 0.809425 | 1.904767e-50 | -8.615850e-47 |
Msa0322460 | Msa0682420 | 0.831223 | 1.885464e-55 | -8.615850e-47 |
Msa0328090 | Msa0682420 | 0.809936 | 1.478663e-50 | -8.615850e-47 |
Msa0346170 | Msa0682420 | 0.818031 | 2.423794e-52 | -8.615850e-47 |
Msa0356320 | Msa0682420 | 0.809099 | 2.237126e-50 | -8.615850e-47 |
Msa0356410 | Msa0682420 | 0.802938 | 4.423181e-49 | -8.615850e-47 |
Msa0489370 | Msa0682420 | 0.841788 | 3.843013e-58 | -8.615850e-47 |
Msa0491800 | Msa0682420 | 0.828617 | 8.137497e-55 | -8.615850e-47 |
Msa0493870 | Msa0682420 | 0.805428 | 1.341346e-49 | -8.615850e-47 |
Msa0510870 | Msa0682420 | 0.805339 | 1.400230e-49 | -8.615850e-47 |
Msa0512280 | Msa0682420 | 0.801092 | 1.059836e-48 | -8.615850e-47 |
Msa0515130 | Msa0682420 | 0.803270 | 3.777201e-49 | -8.615850e-47 |
Msa0515420 | Msa0682420 | -0.801490 | 8.783947e-49 | -8.615850e-47 |
Msa0517820 | Msa0682420 | -0.803235 | 3.839901e-49 | -8.615850e-47 |
Msa0529420 | Msa0682420 | 0.819820 | 9.500516e-53 | -8.615850e-47 |
Msa0533510 | Msa0682420 | 0.826326 | 2.885168e-54 | -8.615850e-47 |
Msa0533520 | Msa0682420 | 0.808288 | 3.334404e-50 | -8.615850e-47 |
Msa0535570 | Msa0682420 | 0.815176 | 1.057107e-51 | -8.615850e-47 |
Msa0537960 | Msa0682420 | -0.803224 | 3.859706e-49 | -8.615850e-47 |
Msa0538440 | Msa0682420 | 0.863875 | 1.821797e-64 | -8.615850e-47 |
Msa0538450 | Msa0682420 | 0.833922 | 4.037926e-56 | -8.615850e-47 |
Msa0538520 | Msa0682420 | 0.829741 | 4.345234e-55 | -8.615850e-47 |
Msa0538530 | Msa0682420 | 0.858158 | 9.979665e-63 | -8.615850e-47 |
Msa0545680 | Msa0682420 | 0.808392 | 3.168508e-50 | -8.615850e-47 |
Msa0546750 | Msa0682420 | 0.869730 | 2.487951e-66 | -8.615850e-47 |
Msa0546760 | Msa0682420 | 0.921439 | 3.571093e-88 | -8.615850e-47 |
Msa0548790 | Msa0682420 | 0.807908 | 4.015743e-50 | -8.615850e-47 |
Msa0554660 | Msa0682420 | 0.846625 | 1.931672e-59 | -8.615850e-47 |
Msa0565930 | Msa0682420 | -0.805254 | 1.458604e-49 | -8.615850e-47 |
Msa0580840 | Msa0682420 | 0.801662 | 8.100221e-49 | -8.615850e-47 |
Msa0588040 | Msa0682420 | 0.802418 | 5.662758e-49 | -8.615850e-47 |
Msa0589720 | Msa0682420 | 0.821267 | 4.421653e-53 | -8.615850e-47 |
Msa0589730 | Msa0682420 | 0.818076 | 2.366963e-52 | -8.615850e-47 |
Msa0589740 | Msa0682420 | 0.846650 | 1.900413e-59 | -8.615850e-47 |
Msa0591040 | Msa0682420 | 0.803006 | 4.283939e-49 | -8.615850e-47 |
Msa0591490 | Msa0682420 | 0.814929 | 1.199209e-51 | -8.615850e-47 |
Msa0593870 | Msa0682420 | 0.807883 | 4.066375e-50 | -8.615850e-47 |
Msa0594320 | Msa0682420 | 0.806754 | 7.055340e-50 | -8.615850e-47 |
Msa0594330 | Msa0682420 | 0.866369 | 2.999053e-65 | -8.615850e-47 |
Msa0597370 | Msa0682420 | -0.812852 | 3.441338e-51 | -8.615850e-47 |
Msa0597800 | Msa0682420 | 0.818872 | 1.562536e-52 | -8.615850e-47 |
Msa0597820 | Msa0682420 | 0.824988 | 5.988366e-54 | -8.615850e-47 |
Msa0601400 | Msa0682420 | 0.823120 | 1.643036e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0682420 | MtrunA17_Chr4g0028551 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1070 |
Msa0682420 | MtrunA17_Chr4g0028541 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1070 |
Msa0682420 | MtrunA17_Chr8g0368421 | 61.554 | 489 | 186 | 2 | 38 | 524 | 18 | 506 | 0.0 | 591 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0682420 | AT1G08090.1 | 78.828 | 529 | 109 | 1 | 1 | 526 | 1 | 529 | 0.0 | 881 |
Msa0682420 | AT5G60770.1 | 79.017 | 529 | 105 | 2 | 1 | 526 | 1 | 526 | 0.0 | 877 |
Msa0682420 | AT1G08100.1 | 74.855 | 517 | 127 | 2 | 7 | 521 | 6 | 521 | 0.0 | 817 |
Msa0682420 | AT5G60780.1 | 73.171 | 533 | 135 | 3 | 2 | 526 | 6 | 538 | 0.0 | 794 |
Msa0682420 | AT3G45060.1 | 72.097 | 534 | 136 | 4 | 5 | 526 | 9 | 541 | 0.0 | 780 |
Msa0682420 | AT1G12940.1 | 59.259 | 486 | 194 | 2 | 38 | 522 | 20 | 502 | 0.0 | 605 |
Msa0682420 | AT5G14570.1 | 48.723 | 470 | 219 | 4 | 41 | 493 | 18 | 482 | 4.95e-152 | 444 |
Find 132 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATGTTATCATGGGTATTT+TGG | 0.143284 | 4_4:-43927470 | Msa0682420:CDS |
GCCGGAGTCGCTTCGGTTTC+AGG | 0.162646 | 4_4:-43927865 | Msa0682420:CDS |
TGCTGCTGGTTGGGGTAATA+TGG | 0.200878 | 4_4:-43927602 | Msa0682420:CDS |
ATCAACTGGTAATGCAAATT+TGG | 0.211102 | 4_4:+43928062 | None:intergenic |
AAAATTATTGGACTTGTTAA+TGG | 0.213969 | 4_4:-43927628 | Msa0682420:CDS |
ATGTTTAATAGTAAAATTAT+TGG | 0.217642 | 4_4:-43927640 | Msa0682420:CDS |
CCTACTTTATGGTTACTCTA+TGG | 0.225302 | 4_4:-43927226 | Msa0682420:CDS |
ATTCATATCAAGAAGATCTT+TGG | 0.235165 | 4_4:-43926676 | Msa0682420:CDS |
CATTTGTTTCATGCCAATAT+TGG | 0.240129 | 4_4:-43927672 | Msa0682420:CDS |
GGAATCATTGCTGCATCCTT+TGG | 0.291659 | 4_4:-43926927 | Msa0682420:CDS |
CAACAGCTTCAGGTCTTTCA+TGG | 0.291908 | 4_4:-43926569 | Msa0682420:CDS |
CACTCAGCTTATTATGCCTT+TGG | 0.295935 | 4_4:-43927569 | Msa0682420:CDS |
GTTTATGATTGGTTTCTCTT+TGG | 0.307610 | 4_4:-43927698 | Msa0682420:CDS |
AGCTCCATGCATGGAGTAAC+TGG | 0.308320 | 4_4:-43928144 | Msa0682420:CDS |
AGATCTTTGGGAATTATATC+AGG | 0.310342 | 4_4:-43926663 | Msa0682420:CDS |
TAATGGTACTGCTGCTGGTT+GGG | 0.317688 | 4_4:-43927611 | Msa0682420:CDS |
GGAATTATATCAGGTTTAAC+TGG | 0.331122 | 4_4:-43926654 | Msa0682420:CDS |
GGTTGCATCAGCCAAGTCTT+AGG | 0.340353 | 4_4:-43926401 | Msa0682420:CDS |
TAATGGGTAGGAGTTGTATT+TGG | 0.342946 | 4_4:+43926321 | None:intergenic |
TGAAAAGAGTTTGAAAACTT+TGG | 0.345000 | 4_4:+43928026 | None:intergenic |
AACATAGTTGCTCGTCCTTT+CGG | 0.345457 | 4_4:-43926897 | Msa0682420:CDS |
GCAGGTGGAAACTTTGGTTC+TGG | 0.351058 | 4_4:-43926630 | Msa0682420:CDS |
GGTGCAATTTGTGACCTATT+AGG | 0.354243 | 4_4:-43927817 | Msa0682420:CDS |
TTCCAGCTGTGTGTAGCTTT+AGG | 0.354844 | 4_4:+43926946 | None:intergenic |
TCATTTGTTGAAAATGCTTC+TGG | 0.358655 | 4_4:-43927736 | Msa0682420:CDS |
GATGTAGCAGCAAGATTATT+CGG | 0.362131 | 4_4:-43926861 | Msa0682420:CDS |
ACATAGTACTCATCCAATAT+TGG | 0.362676 | 4_4:+43927659 | None:intergenic |
AGAAAGATATCCATGATAAA+TGG | 0.374158 | 4_4:+43927977 | None:intergenic |
TTAAGGTTGTCCCGGATGAT+AGG | 0.374477 | 4_4:+43927913 | None:intergenic |
CTTCTGGTTATATAGCAGTT+AGG | 0.379548 | 4_4:-43927720 | Msa0682420:CDS |
TGGTTGGTTGCATGTTATCA+TGG | 0.382144 | 4_4:-43927479 | Msa0682420:CDS |
GTGCTACTCCTTTCACTGCT+TGG | 0.383160 | 4_4:-43927522 | Msa0682420:CDS |
TTCATATCAAGAAGATCTTT+GGG | 0.385193 | 4_4:-43926675 | Msa0682420:CDS |
GGTTGGGGTAATATGGGTGG+TGG | 0.398747 | 4_4:-43927595 | Msa0682420:CDS |
ACTCCATGCATGGAGCTTCC+TGG | 0.410797 | 4_4:+43928150 | None:intergenic |
AACCATAACGTGGACCTAAT+AGG | 0.411808 | 4_4:+43927803 | None:intergenic |
GGTATGCTATAACAAATTAC+AGG | 0.417060 | 4_4:-43927263 | Msa0682420:CDS |
GCTGCTGGTTGGGGTAATAT+GGG | 0.417787 | 4_4:-43927601 | Msa0682420:CDS |
CTACTTTATGGTTACTCTAT+GGG | 0.419373 | 4_4:-43927225 | Msa0682420:CDS |
GCTGCATGTGGTGCAACATT+TGG | 0.420104 | 4_4:-43926708 | Msa0682420:CDS |
GGCATATAACTTGTACTAAT+GGG | 0.426628 | 4_4:+43926305 | None:intergenic |
CCTTGGTGCTTTGCAGAAGA+AGG | 0.426831 | 4_4:-43927413 | Msa0682420:CDS |
GTTGGGGTAATATGGGTGGT+GGG | 0.435234 | 4_4:-43927594 | Msa0682420:CDS |
ATAGCAGTTAGGTTTATGAT+TGG | 0.436014 | 4_4:-43927709 | Msa0682420:CDS |
TGGATGGGTGCAATGATTGT+TGG | 0.437054 | 4_4:-43926549 | Msa0682420:CDS |
TATATCAATGGCTGATATTG+AGG | 0.442270 | 4_4:-43928178 | None:intergenic |
AAAGATCTTCTTGATATGAA+TGG | 0.444365 | 4_4:+43926678 | None:intergenic |
CACCATTAGTCCCTATCATC+CGG | 0.446745 | 4_4:-43927924 | Msa0682420:CDS |
GACCTATTAGGTCCACGTTA+TGG | 0.448846 | 4_4:-43927805 | Msa0682420:CDS |
AATGGTACTGCTGCTGGTTG+GGG | 0.451568 | 4_4:-43927610 | Msa0682420:CDS |
ACTGGTGCAGGTGGAAACTT+TGG | 0.451991 | 4_4:-43926636 | Msa0682420:CDS |
GGAAAATGAACAAATGCAAC+AGG | 0.456403 | 4_4:+43926516 | None:intergenic |
TGAGAACCTTCCATTTATCA+TGG | 0.456413 | 4_4:-43927987 | Msa0682420:CDS |
TGCGAATGTCGAGACGAAAC+AGG | 0.457564 | 4_4:+43927951 | None:intergenic |
CTTGTTAATGGTACTGCTGC+TGG | 0.461616 | 4_4:-43927616 | Msa0682420:CDS |
AGCTTCAGGTCTTTCATGGA+TGG | 0.465615 | 4_4:-43926565 | Msa0682420:CDS |
ATATCAGGTTTAACTGGTGC+AGG | 0.466260 | 4_4:-43926648 | Msa0682420:CDS |
AGAAAACTCCTCCTAGGGTT+TGG | 0.467221 | 4_4:+43926805 | None:intergenic |
TTGCTGAGTATTTCTATGAC+AGG | 0.469828 | 4_4:-43927176 | Msa0682420:intron |
ATATGCAGAAAACTCCTCCT+AGG | 0.470665 | 4_4:+43926799 | None:intergenic |
AACACTATTACACTTCTGAA+TGG | 0.470788 | 4_4:-43926446 | Msa0682420:CDS |
GCTGATATTGAGGGTTCACC+AGG | 0.480863 | 4_4:-43928168 | Msa0682420:CDS |
CCATAGAGTAACCATAAAGT+AGG | 0.483674 | 4_4:+43927226 | None:intergenic |
TGGTAACGCCGGAGTCGCTT+CGG | 0.494934 | 4_4:-43927872 | Msa0682420:CDS |
TTAATGGTACTGCTGCTGGT+TGG | 0.498414 | 4_4:-43927612 | Msa0682420:CDS |
TCTTCCAGTTACTCCATGCA+TGG | 0.504862 | 4_4:+43928140 | None:intergenic |
TTGGGGTAATATGGGTGGTG+GGG | 0.507796 | 4_4:-43927593 | Msa0682420:CDS |
AACCTAAAGCTACACACAGC+TGG | 0.512286 | 4_4:-43926948 | Msa0682420:CDS |
CTATAACAAATTACAGGACA+TGG | 0.513380 | 4_4:-43927257 | Msa0682420:CDS |
TTGTGAGGTTAAGGTTGTCC+CGG | 0.513783 | 4_4:+43927905 | None:intergenic |
TCCCGGATGATAGGGACTAA+TGG | 0.521058 | 4_4:+43927922 | None:intergenic |
GTGGTATCAGTTGGAACCAT+TGG | 0.524676 | 4_4:+43928087 | None:intergenic |
GATTTGTGTTCAGAATCAAC+TGG | 0.525048 | 4_4:+43928048 | None:intergenic |
ATGAAGATGAAGTACAGAAA+GGG | 0.525551 | 4_4:-43926422 | Msa0682420:CDS |
AATGAAGATGAAGTACAGAA+AGG | 0.527504 | 4_4:-43926423 | Msa0682420:CDS |
TGGGTAGGAGTTGTATTTGG+TGG | 0.527993 | 4_4:+43926324 | None:intergenic |
TAAGGTTGTCCCGGATGATA+GGG | 0.533163 | 4_4:+43927914 | None:intergenic |
TCGGCATGCGAGGAAGGCTA+TGG | 0.535742 | 4_4:-43926842 | Msa0682420:CDS |
GATTTACCTGATGGTAACCT+TGG | 0.538623 | 4_4:-43927430 | Msa0682420:CDS |
TCCATGATCCTCTTCTCAGT+TGG | 0.543814 | 4_4:-43926738 | Msa0682420:CDS |
GATTATTCGGCATGCGAGGA+AGG | 0.544135 | 4_4:-43926848 | Msa0682420:CDS |
ATATCAATGGCTGATATTGA+GGG | 0.546989 | 4_4:-43928177 | None:intergenic |
GTCATCAGTTGCTTCACCAA+TGG | 0.548350 | 4_4:-43928103 | Msa0682420:CDS |
CATTGCTGCATCCTTTGGAA+TGG | 0.548449 | 4_4:-43926922 | Msa0682420:CDS |
GGTTGGTTGCATGTTATCAT+GGG | 0.550695 | 4_4:-43927478 | Msa0682420:CDS |
GCTTCAGGTCTTTCATGGAT+GGG | 0.552112 | 4_4:-43926564 | Msa0682420:CDS |
ATGATAACATGCAACCAACC+AGG | 0.556711 | 4_4:+43927481 | None:intergenic |
CTTGTGCTCCAACTGAGAAG+AGG | 0.561854 | 4_4:+43926730 | None:intergenic |
ACCATTAGTCCCTATCATCC+GGG | 0.562252 | 4_4:-43927923 | Msa0682420:CDS |
ACCTGAAACCGAAGCGACTC+CGG | 0.567599 | 4_4:+43927864 | None:intergenic |
AACTATGTTTGCCATTCCAA+AGG | 0.569835 | 4_4:+43926911 | None:intergenic |
CATAGAGTAACCATAAAGTA+GGG | 0.569934 | 4_4:+43927227 | None:intergenic |
AACCTCACAAAATCCGATGT+TGG | 0.571313 | 4_4:-43927892 | Msa0682420:CDS |
CTTGGTGCTTTGCAGAAGAA+GGG | 0.574830 | 4_4:-43927412 | Msa0682420:CDS |
AATTTGGCTGTGGTATCAGT+TGG | 0.576596 | 4_4:+43928078 | None:intergenic |
GCAATTCTCCAAGCAGTGAA+AGG | 0.578221 | 4_4:+43927514 | None:intergenic |
GAGAATAGTCGTTCTGAGAG+AGG | 0.578576 | 4_4:-43926372 | Msa0682420:CDS |
TTGGTGCTGTTAGCATGATA+AGG | 0.579781 | 4_4:+43927773 | None:intergenic |
AATGACATACAAAACACTGT+TGG | 0.582355 | 4_4:+43927754 | None:intergenic |
TTCTCAGCAAACCTAAGACT+TGG | 0.583555 | 4_4:+43926390 | None:intergenic |
TCACCAGGAAGCTCCATGCA+TGG | 0.586180 | 4_4:-43928153 | Msa0682420:CDS |
AAATGGAAGGTTCTCATGTG+AGG | 0.586590 | 4_4:+43927994 | None:intergenic |
TTAGGTCAAGATTTACCTGA+TGG | 0.587027 | 4_4:-43927439 | Msa0682420:CDS |
AAAGCACCAAGGTTACCATC+AGG | 0.588442 | 4_4:+43927424 | None:intergenic |
TATGAGTTGATTAGAAGAGC+TGG | 0.589543 | 4_4:-43927544 | Msa0682420:CDS |
TATAACTTGTACTAATGGGT+AGG | 0.599050 | 4_4:+43926309 | None:intergenic |
ATAGTTGCTCGTCCTTTCGG+AGG | 0.607439 | 4_4:-43926894 | Msa0682420:CDS |
ATCATGGATAGTACTGCGAT+CGG | 0.609698 | 4_4:+43926753 | None:intergenic |
TGGATCTTCCAAACCCTAGG+AGG | 0.611729 | 4_4:-43926813 | Msa0682420:CDS |
CCTTCTTCTGCAAAGCACCA+AGG | 0.613924 | 4_4:+43927413 | None:intergenic |
TCAGGTTTAACTGGTGCAGG+TGG | 0.614618 | 4_4:-43926645 | Msa0682420:CDS |
TCCAACTGAGAAGAGGATCA+TGG | 0.614752 | 4_4:+43926737 | None:intergenic |
TATGCAGAAAACTCCTCCTA+GGG | 0.614927 | 4_4:+43926800 | None:intergenic |
AATGGAAGGTTCTCATGTGA+GGG | 0.615898 | 4_4:+43927995 | None:intergenic |
CTAATCAACTCATACACCAA+AGG | 0.617873 | 4_4:+43927553 | None:intergenic |
GAGGAAGGCTATGGACACTC+TGG | 0.618172 | 4_4:-43926833 | Msa0682420:CDS |
AGATATCCATGATAAATGGA+AGG | 0.625047 | 4_4:+43927981 | None:intergenic |
TGAAGCAACTGATGACATGA+AGG | 0.627231 | 4_4:+43928110 | None:intergenic |
GCTGGTTGGGGTAATATGGG+TGG | 0.628336 | 4_4:-43927598 | Msa0682420:CDS |
AAATCCGATGTTGGTAACGC+CGG | 0.634865 | 4_4:-43927883 | Msa0682420:CDS |
GCAAGATTATTCGGCATGCG+AGG | 0.636291 | 4_4:-43926852 | Msa0682420:CDS |
CTCTGGATCTTCCAAACCCT+AGG | 0.638609 | 4_4:-43926816 | Msa0682420:CDS |
TGGTAATGCAAATTTGGCTG+TGG | 0.639028 | 4_4:+43928068 | None:intergenic |
GACTCCGGCGTTACCAACAT+CGG | 0.646168 | 4_4:+43927879 | None:intergenic |
TGATAACATGCAACCAACCA+GGG | 0.648113 | 4_4:+43927482 | None:intergenic |
CTCAGCAATGACATTGTCAG+TGG | 0.659860 | 4_4:+43927191 | None:intergenic |
TCTGATGCATATCCTCCGAA+AGG | 0.660618 | 4_4:+43926882 | None:intergenic |
TTCTGAGAGAGGAAAACGTG+TGG | 0.676787 | 4_4:-43926361 | Msa0682420:CDS |
GTTGGAGCACAAGCTGCATG+TGG | 0.687636 | 4_4:-43926720 | Msa0682420:CDS |
AGGAAAGCACAACCATAACG+TGG | 0.709978 | 4_4:+43927793 | None:intergenic |
CAAAGGCATAATAAGCTGAG+TGG | 0.711499 | 4_4:+43927570 | None:intergenic |
AGGAACATGCTACCCCACTG+TGG | 0.730068 | 4_4:+43926495 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTTTAATAGTAAAATTAT+TGG | - | chr4_4:43926851-43926870 | Msa0682420:CDS | 10.0% |
!! | ATGTTTAATAGTAAAATTAT+TGG | - | chr4_4:43926851-43926870 | Msa0682420:CDS | 10.0% |
!! | TCAAAGTATATTAAATGATT+TGG | - | chr4_4:43927180-43927199 | Msa0682420:CDS | 15.0% |
!! | CTAATGAATTAATATAAAAC+AGG | - | chr4_4:43927517-43927536 | Msa0682420:CDS | 15.0% |
!! | TCAAAGTATATTAAATGATT+TGG | - | chr4_4:43927180-43927199 | Msa0682420:CDS | 15.0% |
!! | CTAATGAATTAATATAAAAC+AGG | - | chr4_4:43927517-43927536 | Msa0682420:CDS | 15.0% |
!!! | AAAATTATTGGACTTGTTAA+TGG | - | chr4_4:43926863-43926882 | Msa0682420:CDS | 20.0% |
!!! | TTGGTTATGATTTTTTTTTC+AGG | - | chr4_4:43927199-43927218 | Msa0682420:CDS | 20.0% |
!!! | CGTATCATAATTTTAAATTG+TGG | + | chr4_4:43927428-43927447 | None:intergenic | 20.0% |
!!! | CTCAATTTTTTTTAAAACCT+AGG | - | chr4_4:43927455-43927474 | Msa0682420:CDS | 20.0% |
!!! | AAAATTATTGGACTTGTTAA+TGG | - | chr4_4:43926863-43926882 | Msa0682420:CDS | 20.0% |
!!! | TTGGTTATGATTTTTTTTTC+AGG | - | chr4_4:43927199-43927218 | Msa0682420:CDS | 20.0% |
!!! | CGTATCATAATTTTAAATTG+TGG | + | chr4_4:43927428-43927447 | None:intergenic | 20.0% |
!!! | CTCAATTTTTTTTAAAACCT+AGG | - | chr4_4:43927455-43927474 | Msa0682420:CDS | 20.0% |
! | TGAAAAGAGTTTGAAAACTT+TGG | + | chr4_4:43926468-43926487 | None:intergenic | 25.0% |
!! | AGTTTTCAAACTCTTTTCAA+TGG | - | chr4_4:43926469-43926488 | Msa0682420:CDS | 25.0% |
! | AGAAAGATATCCATGATAAA+TGG | + | chr4_4:43926517-43926536 | None:intergenic | 25.0% |
! | TGTAGATATATACAATCTTG+AGG | + | chr4_4:43927370-43927389 | None:intergenic | 25.0% |
! | AAAGATCTTCTTGATATGAA+TGG | + | chr4_4:43927816-43927835 | None:intergenic | 25.0% |
! | ATTCATATCAAGAAGATCTT+TGG | - | chr4_4:43927815-43927834 | Msa0682420:CDS | 25.0% |
! | TTCATATCAAGAAGATCTTT+GGG | - | chr4_4:43927816-43927835 | Msa0682420:CDS | 25.0% |
! | TGAAAAGAGTTTGAAAACTT+TGG | + | chr4_4:43926468-43926487 | None:intergenic | 25.0% |
!! | AGTTTTCAAACTCTTTTCAA+TGG | - | chr4_4:43926469-43926488 | Msa0682420:CDS | 25.0% |
! | AGAAAGATATCCATGATAAA+TGG | + | chr4_4:43926517-43926536 | None:intergenic | 25.0% |
! | TGTAGATATATACAATCTTG+AGG | + | chr4_4:43927370-43927389 | None:intergenic | 25.0% |
! | AAAGATCTTCTTGATATGAA+TGG | + | chr4_4:43927816-43927835 | None:intergenic | 25.0% |
! | ATTCATATCAAGAAGATCTT+TGG | - | chr4_4:43927815-43927834 | Msa0682420:CDS | 25.0% |
! | TTCATATCAAGAAGATCTTT+GGG | - | chr4_4:43927816-43927835 | Msa0682420:CDS | 25.0% |
! | ATCAACTGGTAATGCAAATT+TGG | + | chr4_4:43926432-43926451 | None:intergenic | 30.0% |
AGATATCCATGATAAATGGA+AGG | + | chr4_4:43926513-43926532 | None:intergenic | 30.0% | |
!! | TTTCAGGTAGTATTTTCTCA+AGG | - | chr4_4:43926642-43926661 | Msa0682420:CDS | 30.0% |
AATGACATACAAAACACTGT+TGG | + | chr4_4:43926740-43926759 | None:intergenic | 30.0% | |
! | TCATTTGTTGAAAATGCTTC+TGG | - | chr4_4:43926755-43926774 | Msa0682420:CDS | 30.0% |
ATAGCAGTTAGGTTTATGAT+TGG | - | chr4_4:43926782-43926801 | Msa0682420:CDS | 30.0% | |
!! | GTTTATGATTGGTTTCTCTT+TGG | - | chr4_4:43926793-43926812 | Msa0682420:CDS | 30.0% |
CATTTGTTTCATGCCAATAT+TGG | - | chr4_4:43926819-43926838 | Msa0682420:CDS | 30.0% | |
ACATAGTACTCATCCAATAT+TGG | + | chr4_4:43926835-43926854 | None:intergenic | 30.0% | |
!!! | GGTATTTTGGTCTTAACATT+AGG | - | chr4_4:43927034-43927053 | Msa0682420:intron | 30.0% |
GGTATGCTATAACAAATTAC+AGG | - | chr4_4:43927228-43927247 | Msa0682420:CDS | 30.0% | |
CTATAACAAATTACAGGACA+TGG | - | chr4_4:43927234-43927253 | Msa0682420:CDS | 30.0% | |
CATAGAGTAACCATAAAGTA+GGG | + | chr4_4:43927267-43927286 | None:intergenic | 30.0% | |
CTACTTTATGGTTACTCTAT+GGG | - | chr4_4:43927266-43927285 | Msa0682420:CDS | 30.0% | |
! | AGATCTTTGGGAATTATATC+AGG | - | chr4_4:43927828-43927847 | Msa0682420:CDS | 30.0% |
GGAATTATATCAGGTTTAAC+TGG | - | chr4_4:43927837-43927856 | Msa0682420:CDS | 30.0% | |
! | TCAAAATTTTCAACAGCTTC+AGG | - | chr4_4:43927912-43927931 | Msa0682420:CDS | 30.0% |
! | ATTTGTTCATTTTCCACAGT+GGG | - | chr4_4:43927983-43928002 | Msa0682420:CDS | 30.0% |
! | TCTTCATTGATCTCTTTTGA+AGG | + | chr4_4:43928026-43928045 | None:intergenic | 30.0% |
AACACTATTACACTTCTGAA+TGG | - | chr4_4:43928045-43928064 | Msa0682420:CDS | 30.0% | |
AATGAAGATGAAGTACAGAA+AGG | - | chr4_4:43928068-43928087 | Msa0682420:CDS | 30.0% | |
ATGAAGATGAAGTACAGAAA+GGG | - | chr4_4:43928069-43928088 | Msa0682420:CDS | 30.0% | |
! | ATCAACTGGTAATGCAAATT+TGG | + | chr4_4:43926432-43926451 | None:intergenic | 30.0% |
AGATATCCATGATAAATGGA+AGG | + | chr4_4:43926513-43926532 | None:intergenic | 30.0% | |
!! | TTTCAGGTAGTATTTTCTCA+AGG | - | chr4_4:43926642-43926661 | Msa0682420:CDS | 30.0% |
AATGACATACAAAACACTGT+TGG | + | chr4_4:43926740-43926759 | None:intergenic | 30.0% | |
! | TCATTTGTTGAAAATGCTTC+TGG | - | chr4_4:43926755-43926774 | Msa0682420:CDS | 30.0% |
ATAGCAGTTAGGTTTATGAT+TGG | - | chr4_4:43926782-43926801 | Msa0682420:CDS | 30.0% | |
!! | GTTTATGATTGGTTTCTCTT+TGG | - | chr4_4:43926793-43926812 | Msa0682420:CDS | 30.0% |
CATTTGTTTCATGCCAATAT+TGG | - | chr4_4:43926819-43926838 | Msa0682420:CDS | 30.0% | |
ACATAGTACTCATCCAATAT+TGG | + | chr4_4:43926835-43926854 | None:intergenic | 30.0% | |
!!! | GGTATTTTGGTCTTAACATT+AGG | - | chr4_4:43927034-43927053 | Msa0682420:intron | 30.0% |
GGTATGCTATAACAAATTAC+AGG | - | chr4_4:43927228-43927247 | Msa0682420:CDS | 30.0% | |
CTATAACAAATTACAGGACA+TGG | - | chr4_4:43927234-43927253 | Msa0682420:CDS | 30.0% | |
CATAGAGTAACCATAAAGTA+GGG | + | chr4_4:43927267-43927286 | None:intergenic | 30.0% | |
CTACTTTATGGTTACTCTAT+GGG | - | chr4_4:43927266-43927285 | Msa0682420:CDS | 30.0% | |
! | AGATCTTTGGGAATTATATC+AGG | - | chr4_4:43927828-43927847 | Msa0682420:CDS | 30.0% |
GGAATTATATCAGGTTTAAC+TGG | - | chr4_4:43927837-43927856 | Msa0682420:CDS | 30.0% | |
! | TCAAAATTTTCAACAGCTTC+AGG | - | chr4_4:43927912-43927931 | Msa0682420:CDS | 30.0% |
! | ATTTGTTCATTTTCCACAGT+GGG | - | chr4_4:43927983-43928002 | Msa0682420:CDS | 30.0% |
! | TCTTCATTGATCTCTTTTGA+AGG | + | chr4_4:43928026-43928045 | None:intergenic | 30.0% |
AACACTATTACACTTCTGAA+TGG | - | chr4_4:43928045-43928064 | Msa0682420:CDS | 30.0% | |
AATGAAGATGAAGTACAGAA+AGG | - | chr4_4:43928068-43928087 | Msa0682420:CDS | 30.0% | |
ATGAAGATGAAGTACAGAAA+GGG | - | chr4_4:43928069-43928088 | Msa0682420:CDS | 30.0% | |
GATTTGTGTTCAGAATCAAC+TGG | + | chr4_4:43926446-43926465 | None:intergenic | 35.0% | |
TGAGAACCTTCCATTTATCA+TGG | - | chr4_4:43926504-43926523 | Msa0682420:CDS | 35.0% | |
! | TATTTTCTCAAGGCTTGCAA+TGG | - | chr4_4:43926652-43926671 | Msa0682420:CDS | 35.0% |
! | ATTTTCTCAAGGCTTGCAAT+GGG | - | chr4_4:43926653-43926672 | Msa0682420:CDS | 35.0% |
! | CTTCTGGTTATATAGCAGTT+AGG | - | chr4_4:43926771-43926790 | Msa0682420:CDS | 35.0% |
CTAATCAACTCATACACCAA+AGG | + | chr4_4:43926941-43926960 | None:intergenic | 35.0% | |
!! | TATGAGTTGATTAGAAGAGC+TGG | - | chr4_4:43926947-43926966 | Msa0682420:CDS | 35.0% |
!!! | AGAATTGCCTTTTTTATCCC+TGG | - | chr4_4:43926992-43927011 | Msa0682420:intron | 35.0% |
! | GCATGTTATCATGGGTATTT+TGG | - | chr4_4:43927021-43927040 | Msa0682420:intron | 35.0% |
TTAGGTCAAGATTTACCTGA+TGG | - | chr4_4:43927052-43927071 | Msa0682420:intron | 35.0% | |
!!! | GATTTTTTTTTCAGGTGCTG+TGG | - | chr4_4:43927207-43927226 | Msa0682420:CDS | 35.0% |
! | TGGATTTTTGCCCTACTTTA+TGG | - | chr4_4:43927254-43927273 | Msa0682420:CDS | 35.0% |
CCATAGAGTAACCATAAAGT+AGG | + | chr4_4:43927268-43927287 | None:intergenic | 35.0% | |
CCTACTTTATGGTTACTCTA+TGG | - | chr4_4:43927265-43927284 | Msa0682420:CDS | 35.0% | |
! | TTGCTGAGTATTTCTATGAC+AGG | - | chr4_4:43927315-43927334 | Msa0682420:intron | 35.0% |
! | AACGTTTGTTACAATCTCCT+AGG | + | chr4_4:43927475-43927494 | None:intergenic | 35.0% |
AACTATGTTTGCCATTCCAA+AGG | + | chr4_4:43927583-43927602 | None:intergenic | 35.0% | |
GATGTAGCAGCAAGATTATT+CGG | - | chr4_4:43927630-43927649 | Msa0682420:CDS | 35.0% | |
GGAAAATGAACAAATGCAAC+AGG | + | chr4_4:43927978-43927997 | None:intergenic | 35.0% | |
! | CATTTGTTCATTTTCCACAG+TGG | - | chr4_4:43927982-43928001 | Msa0682420:CDS | 35.0% |
! | TTTGTTCATTTTCCACAGTG+GGG | - | chr4_4:43927984-43928003 | Msa0682420:CDS | 35.0% |
!! | TCATTGATCTCTTTTGAAGG+TGG | + | chr4_4:43928023-43928042 | None:intergenic | 35.0% |
! | TAATGGGTAGGAGTTGTATT+TGG | + | chr4_4:43928173-43928192 | None:intergenic | 35.0% |
GATTTGTGTTCAGAATCAAC+TGG | + | chr4_4:43926446-43926465 | None:intergenic | 35.0% | |
TGAGAACCTTCCATTTATCA+TGG | - | chr4_4:43926504-43926523 | Msa0682420:CDS | 35.0% | |
! | TATTTTCTCAAGGCTTGCAA+TGG | - | chr4_4:43926652-43926671 | Msa0682420:CDS | 35.0% |
! | ATTTTCTCAAGGCTTGCAAT+GGG | - | chr4_4:43926653-43926672 | Msa0682420:CDS | 35.0% |
! | CTTCTGGTTATATAGCAGTT+AGG | - | chr4_4:43926771-43926790 | Msa0682420:CDS | 35.0% |
CTAATCAACTCATACACCAA+AGG | + | chr4_4:43926941-43926960 | None:intergenic | 35.0% | |
!! | TATGAGTTGATTAGAAGAGC+TGG | - | chr4_4:43926947-43926966 | Msa0682420:CDS | 35.0% |
!!! | AGAATTGCCTTTTTTATCCC+TGG | - | chr4_4:43926992-43927011 | Msa0682420:intron | 35.0% |
! | GCATGTTATCATGGGTATTT+TGG | - | chr4_4:43927021-43927040 | Msa0682420:intron | 35.0% |
TTAGGTCAAGATTTACCTGA+TGG | - | chr4_4:43927052-43927071 | Msa0682420:intron | 35.0% | |
!!! | GATTTTTTTTTCAGGTGCTG+TGG | - | chr4_4:43927207-43927226 | Msa0682420:CDS | 35.0% |
! | TGGATTTTTGCCCTACTTTA+TGG | - | chr4_4:43927254-43927273 | Msa0682420:CDS | 35.0% |
CCATAGAGTAACCATAAAGT+AGG | + | chr4_4:43927268-43927287 | None:intergenic | 35.0% | |
CCTACTTTATGGTTACTCTA+TGG | - | chr4_4:43927265-43927284 | Msa0682420:CDS | 35.0% | |
! | TTGCTGAGTATTTCTATGAC+AGG | - | chr4_4:43927315-43927334 | Msa0682420:intron | 35.0% |
! | AACGTTTGTTACAATCTCCT+AGG | + | chr4_4:43927475-43927494 | None:intergenic | 35.0% |
AACTATGTTTGCCATTCCAA+AGG | + | chr4_4:43927583-43927602 | None:intergenic | 35.0% | |
GATGTAGCAGCAAGATTATT+CGG | - | chr4_4:43927630-43927649 | Msa0682420:CDS | 35.0% | |
GGAAAATGAACAAATGCAAC+AGG | + | chr4_4:43927978-43927997 | None:intergenic | 35.0% | |
! | CATTTGTTCATTTTCCACAG+TGG | - | chr4_4:43927982-43928001 | Msa0682420:CDS | 35.0% |
! | TTTGTTCATTTTCCACAGTG+GGG | - | chr4_4:43927984-43928003 | Msa0682420:CDS | 35.0% |
!! | TCATTGATCTCTTTTGAAGG+TGG | + | chr4_4:43928023-43928042 | None:intergenic | 35.0% |
! | TAATGGGTAGGAGTTGTATT+TGG | + | chr4_4:43928173-43928192 | None:intergenic | 35.0% |
TGAAGCAACTGATGACATGA+AGG | + | chr4_4:43926384-43926403 | None:intergenic | 40.0% | |
AATTTGGCTGTGGTATCAGT+TGG | + | chr4_4:43926416-43926435 | None:intergenic | 40.0% | |
! | TGGTAATGCAAATTTGGCTG+TGG | + | chr4_4:43926426-43926445 | None:intergenic | 40.0% |
AATGGAAGGTTCTCATGTGA+GGG | + | chr4_4:43926499-43926518 | None:intergenic | 40.0% | |
AAATGGAAGGTTCTCATGTG+AGG | + | chr4_4:43926500-43926519 | None:intergenic | 40.0% | |
! | CATCGGATTTTGTGAGGTTA+AGG | + | chr4_4:43926598-43926617 | None:intergenic | 40.0% |
AACCTCACAAAATCCGATGT+TGG | - | chr4_4:43926599-43926618 | Msa0682420:CDS | 40.0% | |
! | TACCAACATCGGATTTTGTG+AGG | + | chr4_4:43926604-43926623 | None:intergenic | 40.0% |
GGTGCAATTTGTGACCTATT+AGG | - | chr4_4:43926674-43926693 | Msa0682420:CDS | 40.0% | |
AACCATAACGTGGACCTAAT+AGG | + | chr4_4:43926691-43926710 | None:intergenic | 40.0% | |
!! | TTGGTGCTGTTAGCATGATA+AGG | + | chr4_4:43926721-43926740 | None:intergenic | 40.0% |
! | CAAAGGCATAATAAGCTGAG+TGG | + | chr4_4:43926924-43926943 | None:intergenic | 40.0% |
CACTCAGCTTATTATGCCTT+TGG | - | chr4_4:43926922-43926941 | Msa0682420:CDS | 40.0% | |
!!! | TTGCCTTTTTTATCCCTGGT+TGG | - | chr4_4:43926996-43927015 | Msa0682420:intron | 40.0% |
CAACCAACCAGGGATAAAAA+AGG | + | chr4_4:43927002-43927021 | None:intergenic | 40.0% | |
TGATAACATGCAACCAACCA+GGG | + | chr4_4:43927012-43927031 | None:intergenic | 40.0% | |
ATGATAACATGCAACCAACC+AGG | + | chr4_4:43927013-43927032 | None:intergenic | 40.0% | |
! | TGGTTGGTTGCATGTTATCA+TGG | - | chr4_4:43927012-43927031 | Msa0682420:intron | 40.0% |
! | GGTTGGTTGCATGTTATCAT+GGG | - | chr4_4:43927013-43927032 | Msa0682420:intron | 40.0% |
GATTTACCTGATGGTAACCT+TGG | - | chr4_4:43927061-43927080 | Msa0682420:intron | 40.0% | |
TTAAATTGCAACCGCAGTTG+CGG | - | chr4_4:43927401-43927420 | Msa0682420:CDS | 40.0% | |
AACATAGTTGCTCGTCCTTT+CGG | - | chr4_4:43927594-43927613 | Msa0682420:CDS | 40.0% | |
TATGCAGAAAACTCCTCCTA+GGG | + | chr4_4:43927694-43927713 | None:intergenic | 40.0% | |
ATATGCAGAAAACTCCTCCT+AGG | + | chr4_4:43927695-43927714 | None:intergenic | 40.0% | |
! | TAGGAGGAGTTTTCTGCATA+TGG | - | chr4_4:43927694-43927713 | Msa0682420:CDS | 40.0% |
! | GGAGTTTTCTGCATATGGTT+AGG | - | chr4_4:43927699-43927718 | Msa0682420:CDS | 40.0% |
ATCATGGATAGTACTGCGAT+CGG | + | chr4_4:43927741-43927760 | None:intergenic | 40.0% | |
ATATCAGGTTTAACTGGTGC+AGG | - | chr4_4:43927843-43927862 | Msa0682420:CDS | 40.0% | |
!! | TGATCTCTTTTGAAGGTGGA+AGG | + | chr4_4:43928019-43928038 | None:intergenic | 40.0% |
TTCTCAGCAAACCTAAGACT+TGG | + | chr4_4:43928104-43928123 | None:intergenic | 40.0% | |
TGAAGCAACTGATGACATGA+AGG | + | chr4_4:43926384-43926403 | None:intergenic | 40.0% | |
AATTTGGCTGTGGTATCAGT+TGG | + | chr4_4:43926416-43926435 | None:intergenic | 40.0% | |
! | TGGTAATGCAAATTTGGCTG+TGG | + | chr4_4:43926426-43926445 | None:intergenic | 40.0% |
AATGGAAGGTTCTCATGTGA+GGG | + | chr4_4:43926499-43926518 | None:intergenic | 40.0% | |
AAATGGAAGGTTCTCATGTG+AGG | + | chr4_4:43926500-43926519 | None:intergenic | 40.0% | |
! | CATCGGATTTTGTGAGGTTA+AGG | + | chr4_4:43926598-43926617 | None:intergenic | 40.0% |
AACCTCACAAAATCCGATGT+TGG | - | chr4_4:43926599-43926618 | Msa0682420:CDS | 40.0% | |
! | TACCAACATCGGATTTTGTG+AGG | + | chr4_4:43926604-43926623 | None:intergenic | 40.0% |
GGTGCAATTTGTGACCTATT+AGG | - | chr4_4:43926674-43926693 | Msa0682420:CDS | 40.0% | |
AACCATAACGTGGACCTAAT+AGG | + | chr4_4:43926691-43926710 | None:intergenic | 40.0% | |
!! | TTGGTGCTGTTAGCATGATA+AGG | + | chr4_4:43926721-43926740 | None:intergenic | 40.0% |
! | CAAAGGCATAATAAGCTGAG+TGG | + | chr4_4:43926924-43926943 | None:intergenic | 40.0% |
CACTCAGCTTATTATGCCTT+TGG | - | chr4_4:43926922-43926941 | Msa0682420:CDS | 40.0% | |
!!! | TTGCCTTTTTTATCCCTGGT+TGG | - | chr4_4:43926996-43927015 | Msa0682420:intron | 40.0% |
CAACCAACCAGGGATAAAAA+AGG | + | chr4_4:43927002-43927021 | None:intergenic | 40.0% | |
TGATAACATGCAACCAACCA+GGG | + | chr4_4:43927012-43927031 | None:intergenic | 40.0% | |
ATGATAACATGCAACCAACC+AGG | + | chr4_4:43927013-43927032 | None:intergenic | 40.0% | |
! | TGGTTGGTTGCATGTTATCA+TGG | - | chr4_4:43927012-43927031 | Msa0682420:intron | 40.0% |
! | GGTTGGTTGCATGTTATCAT+GGG | - | chr4_4:43927013-43927032 | Msa0682420:intron | 40.0% |
GATTTACCTGATGGTAACCT+TGG | - | chr4_4:43927061-43927080 | Msa0682420:intron | 40.0% | |
TTAAATTGCAACCGCAGTTG+CGG | - | chr4_4:43927401-43927420 | Msa0682420:CDS | 40.0% | |
AACATAGTTGCTCGTCCTTT+CGG | - | chr4_4:43927594-43927613 | Msa0682420:CDS | 40.0% | |
TATGCAGAAAACTCCTCCTA+GGG | + | chr4_4:43927694-43927713 | None:intergenic | 40.0% | |
ATATGCAGAAAACTCCTCCT+AGG | + | chr4_4:43927695-43927714 | None:intergenic | 40.0% | |
! | TAGGAGGAGTTTTCTGCATA+TGG | - | chr4_4:43927694-43927713 | Msa0682420:CDS | 40.0% |
! | GGAGTTTTCTGCATATGGTT+AGG | - | chr4_4:43927699-43927718 | Msa0682420:CDS | 40.0% |
ATCATGGATAGTACTGCGAT+CGG | + | chr4_4:43927741-43927760 | None:intergenic | 40.0% | |
ATATCAGGTTTAACTGGTGC+AGG | - | chr4_4:43927843-43927862 | Msa0682420:CDS | 40.0% | |
!! | TGATCTCTTTTGAAGGTGGA+AGG | + | chr4_4:43928019-43928038 | None:intergenic | 40.0% |
TTCTCAGCAAACCTAAGACT+TGG | + | chr4_4:43928104-43928123 | None:intergenic | 40.0% | |
TCTTCCAGTTACTCCATGCA+TGG | + | chr4_4:43926354-43926373 | None:intergenic | 45.0% | |
GTCATCAGTTGCTTCACCAA+TGG | - | chr4_4:43926388-43926407 | Msa0682420:CDS | 45.0% | |
GTGGTATCAGTTGGAACCAT+TGG | + | chr4_4:43926407-43926426 | None:intergenic | 45.0% | |
CACCATTAGTCCCTATCATC+CGG | - | chr4_4:43926567-43926586 | Msa0682420:CDS | 45.0% | |
ACCATTAGTCCCTATCATCC+GGG | - | chr4_4:43926568-43926587 | Msa0682420:CDS | 45.0% | |
TAAGGTTGTCCCGGATGATA+GGG | + | chr4_4:43926580-43926599 | None:intergenic | 45.0% | |
TTAAGGTTGTCCCGGATGAT+AGG | + | chr4_4:43926581-43926600 | None:intergenic | 45.0% | |
TTGTGAGGTTAAGGTTGTCC+CGG | + | chr4_4:43926589-43926608 | None:intergenic | 45.0% | |
!! | AAATCCGATGTTGGTAACGC+CGG | - | chr4_4:43926608-43926627 | Msa0682420:CDS | 45.0% |
GACCTATTAGGTCCACGTTA+TGG | - | chr4_4:43926686-43926705 | Msa0682420:CDS | 45.0% | |
! | AGGAAAGCACAACCATAACG+TGG | + | chr4_4:43926701-43926720 | None:intergenic | 45.0% |
CTTGTTAATGGTACTGCTGC+TGG | - | chr4_4:43926875-43926894 | Msa0682420:CDS | 45.0% | |
TTAATGGTACTGCTGCTGGT+TGG | - | chr4_4:43926879-43926898 | Msa0682420:CDS | 45.0% | |
! | TAATGGTACTGCTGCTGGTT+GGG | - | chr4_4:43926880-43926899 | Msa0682420:CDS | 45.0% |
GCAATTCTCCAAGCAGTGAA+AGG | + | chr4_4:43926980-43926999 | None:intergenic | 45.0% | |
! | AAAGCACCAAGGTTACCATC+AGG | + | chr4_4:43927070-43927089 | None:intergenic | 45.0% |
!! | CTTGGTGCTTTGCAGAAGAA+GGG | - | chr4_4:43927079-43927098 | Msa0682420:intron | 45.0% |
CTCAGCAATGACATTGTCAG+TGG | + | chr4_4:43927303-43927322 | None:intergenic | 45.0% | |
TAAATTGTGGTCCGCAACTG+CGG | + | chr4_4:43927415-43927434 | None:intergenic | 45.0% | |
AACCTAAAGCTACACACAGC+TGG | - | chr4_4:43927543-43927562 | Msa0682420:CDS | 45.0% | |
TTCCAGCTGTGTGTAGCTTT+AGG | + | chr4_4:43927548-43927567 | None:intergenic | 45.0% | |
GGAATCATTGCTGCATCCTT+TGG | - | chr4_4:43927564-43927583 | Msa0682420:CDS | 45.0% | |
! | CATTGCTGCATCCTTTGGAA+TGG | - | chr4_4:43927569-43927588 | Msa0682420:CDS | 45.0% |
TCTGATGCATATCCTCCGAA+AGG | + | chr4_4:43927612-43927631 | None:intergenic | 45.0% | |
AGAAAACTCCTCCTAGGGTT+TGG | + | chr4_4:43927689-43927708 | None:intergenic | 45.0% | |
TCCATGATCCTCTTCTCAGT+TGG | - | chr4_4:43927753-43927772 | Msa0682420:CDS | 45.0% | |
TCCAACTGAGAAGAGGATCA+TGG | + | chr4_4:43927757-43927776 | None:intergenic | 45.0% | |
CAACAGCTTCAGGTCTTTCA+TGG | - | chr4_4:43927922-43927941 | Msa0682420:CDS | 45.0% | |
AGCTTCAGGTCTTTCATGGA+TGG | - | chr4_4:43927926-43927945 | Msa0682420:CDS | 45.0% | |
GCTTCAGGTCTTTCATGGAT+GGG | - | chr4_4:43927927-43927946 | Msa0682420:CDS | 45.0% | |
TGGATGGGTGCAATGATTGT+TGG | - | chr4_4:43927942-43927961 | Msa0682420:CDS | 45.0% | |
!! | GAGAATAGTCGTTCTGAGAG+AGG | - | chr4_4:43928119-43928138 | Msa0682420:CDS | 45.0% |
! | TTCTGAGAGAGGAAAACGTG+TGG | - | chr4_4:43928130-43928149 | Msa0682420:CDS | 45.0% |
TGGGTAGGAGTTGTATTTGG+TGG | + | chr4_4:43928170-43928189 | None:intergenic | 45.0% | |
TCTTCCAGTTACTCCATGCA+TGG | + | chr4_4:43926354-43926373 | None:intergenic | 45.0% | |
GTCATCAGTTGCTTCACCAA+TGG | - | chr4_4:43926388-43926407 | Msa0682420:CDS | 45.0% | |
GTGGTATCAGTTGGAACCAT+TGG | + | chr4_4:43926407-43926426 | None:intergenic | 45.0% | |
CACCATTAGTCCCTATCATC+CGG | - | chr4_4:43926567-43926586 | Msa0682420:CDS | 45.0% | |
ACCATTAGTCCCTATCATCC+GGG | - | chr4_4:43926568-43926587 | Msa0682420:CDS | 45.0% | |
TAAGGTTGTCCCGGATGATA+GGG | + | chr4_4:43926580-43926599 | None:intergenic | 45.0% | |
TTAAGGTTGTCCCGGATGAT+AGG | + | chr4_4:43926581-43926600 | None:intergenic | 45.0% | |
TTGTGAGGTTAAGGTTGTCC+CGG | + | chr4_4:43926589-43926608 | None:intergenic | 45.0% | |
!! | AAATCCGATGTTGGTAACGC+CGG | - | chr4_4:43926608-43926627 | Msa0682420:CDS | 45.0% |
GACCTATTAGGTCCACGTTA+TGG | - | chr4_4:43926686-43926705 | Msa0682420:CDS | 45.0% | |
! | AGGAAAGCACAACCATAACG+TGG | + | chr4_4:43926701-43926720 | None:intergenic | 45.0% |
CTTGTTAATGGTACTGCTGC+TGG | - | chr4_4:43926875-43926894 | Msa0682420:CDS | 45.0% | |
TTAATGGTACTGCTGCTGGT+TGG | - | chr4_4:43926879-43926898 | Msa0682420:CDS | 45.0% | |
! | TAATGGTACTGCTGCTGGTT+GGG | - | chr4_4:43926880-43926899 | Msa0682420:CDS | 45.0% |
GCAATTCTCCAAGCAGTGAA+AGG | + | chr4_4:43926980-43926999 | None:intergenic | 45.0% | |
! | AAAGCACCAAGGTTACCATC+AGG | + | chr4_4:43927070-43927089 | None:intergenic | 45.0% |
!! | CTTGGTGCTTTGCAGAAGAA+GGG | - | chr4_4:43927079-43927098 | Msa0682420:intron | 45.0% |
CTCAGCAATGACATTGTCAG+TGG | + | chr4_4:43927303-43927322 | None:intergenic | 45.0% | |
TAAATTGTGGTCCGCAACTG+CGG | + | chr4_4:43927415-43927434 | None:intergenic | 45.0% | |
AACCTAAAGCTACACACAGC+TGG | - | chr4_4:43927543-43927562 | Msa0682420:CDS | 45.0% | |
TTCCAGCTGTGTGTAGCTTT+AGG | + | chr4_4:43927548-43927567 | None:intergenic | 45.0% | |
GGAATCATTGCTGCATCCTT+TGG | - | chr4_4:43927564-43927583 | Msa0682420:CDS | 45.0% | |
! | CATTGCTGCATCCTTTGGAA+TGG | - | chr4_4:43927569-43927588 | Msa0682420:CDS | 45.0% |
TCTGATGCATATCCTCCGAA+AGG | + | chr4_4:43927612-43927631 | None:intergenic | 45.0% | |
AGAAAACTCCTCCTAGGGTT+TGG | + | chr4_4:43927689-43927708 | None:intergenic | 45.0% | |
TCCATGATCCTCTTCTCAGT+TGG | - | chr4_4:43927753-43927772 | Msa0682420:CDS | 45.0% | |
TCCAACTGAGAAGAGGATCA+TGG | + | chr4_4:43927757-43927776 | None:intergenic | 45.0% | |
CAACAGCTTCAGGTCTTTCA+TGG | - | chr4_4:43927922-43927941 | Msa0682420:CDS | 45.0% | |
AGCTTCAGGTCTTTCATGGA+TGG | - | chr4_4:43927926-43927945 | Msa0682420:CDS | 45.0% | |
GCTTCAGGTCTTTCATGGAT+GGG | - | chr4_4:43927927-43927946 | Msa0682420:CDS | 45.0% | |
TGGATGGGTGCAATGATTGT+TGG | - | chr4_4:43927942-43927961 | Msa0682420:CDS | 45.0% | |
!! | GAGAATAGTCGTTCTGAGAG+AGG | - | chr4_4:43928119-43928138 | Msa0682420:CDS | 45.0% |
! | TTCTGAGAGAGGAAAACGTG+TGG | - | chr4_4:43928130-43928149 | Msa0682420:CDS | 45.0% |
TGGGTAGGAGTTGTATTTGG+TGG | + | chr4_4:43928170-43928189 | None:intergenic | 45.0% | |
GCTGATATTGAGGGTTCACC+AGG | - | chr4_4:43926323-43926342 | Msa0682420:CDS | 50.0% | |
AGCTCCATGCATGGAGTAAC+TGG | - | chr4_4:43926347-43926366 | Msa0682420:CDS | 50.0% | |
TGCGAATGTCGAGACGAAAC+AGG | + | chr4_4:43926543-43926562 | None:intergenic | 50.0% | |
TCCCGGATGATAGGGACTAA+TGG | + | chr4_4:43926572-43926591 | None:intergenic | 50.0% | |
! | AATGGTACTGCTGCTGGTTG+GGG | - | chr4_4:43926881-43926900 | Msa0682420:CDS | 50.0% |
! | TGCTGCTGGTTGGGGTAATA+TGG | - | chr4_4:43926889-43926908 | Msa0682420:CDS | 50.0% |
! | GCTGCTGGTTGGGGTAATAT+GGG | - | chr4_4:43926890-43926909 | Msa0682420:CDS | 50.0% |
GTTGGGGTAATATGGGTGGT+GGG | - | chr4_4:43926897-43926916 | Msa0682420:CDS | 50.0% | |
TTGGGGTAATATGGGTGGTG+GGG | - | chr4_4:43926898-43926917 | Msa0682420:CDS | 50.0% | |
! | GTGCTACTCCTTTCACTGCT+TGG | - | chr4_4:43926969-43926988 | Msa0682420:intron | 50.0% |
! | CCTTCTTCTGCAAAGCACCA+AGG | + | chr4_4:43927081-43927100 | None:intergenic | 50.0% |
!! | CCTTGGTGCTTTGCAGAAGA+AGG | - | chr4_4:43927078-43927097 | Msa0682420:intron | 50.0% |
ATAGTTGCTCGTCCTTTCGG+AGG | - | chr4_4:43927597-43927616 | Msa0682420:CDS | 50.0% | |
GCAAGATTATTCGGCATGCG+AGG | - | chr4_4:43927639-43927658 | Msa0682420:CDS | 50.0% | |
GATTATTCGGCATGCGAGGA+AGG | - | chr4_4:43927643-43927662 | Msa0682420:CDS | 50.0% | |
CTCTGGATCTTCCAAACCCT+AGG | - | chr4_4:43927675-43927694 | Msa0682420:CDS | 50.0% | |
TGGATCTTCCAAACCCTAGG+AGG | - | chr4_4:43927678-43927697 | Msa0682420:CDS | 50.0% | |
CTTGTGCTCCAACTGAGAAG+AGG | + | chr4_4:43927764-43927783 | None:intergenic | 50.0% | |
GCTGCATGTGGTGCAACATT+TGG | - | chr4_4:43927783-43927802 | Msa0682420:CDS | 50.0% | |
TCAGGTTTAACTGGTGCAGG+TGG | - | chr4_4:43927846-43927865 | Msa0682420:CDS | 50.0% | |
ACTGGTGCAGGTGGAAACTT+TGG | - | chr4_4:43927855-43927874 | Msa0682420:CDS | 50.0% | |
! | GCAGGTGGAAACTTTGGTTC+TGG | - | chr4_4:43927861-43927880 | Msa0682420:CDS | 50.0% |
GGTTGCATCAGCCAAGTCTT+AGG | - | chr4_4:43928090-43928109 | Msa0682420:CDS | 50.0% | |
GCTGATATTGAGGGTTCACC+AGG | - | chr4_4:43926323-43926342 | Msa0682420:CDS | 50.0% | |
AGCTCCATGCATGGAGTAAC+TGG | - | chr4_4:43926347-43926366 | Msa0682420:CDS | 50.0% | |
TGCGAATGTCGAGACGAAAC+AGG | + | chr4_4:43926543-43926562 | None:intergenic | 50.0% | |
TCCCGGATGATAGGGACTAA+TGG | + | chr4_4:43926572-43926591 | None:intergenic | 50.0% | |
! | AATGGTACTGCTGCTGGTTG+GGG | - | chr4_4:43926881-43926900 | Msa0682420:CDS | 50.0% |
! | TGCTGCTGGTTGGGGTAATA+TGG | - | chr4_4:43926889-43926908 | Msa0682420:CDS | 50.0% |
! | GCTGCTGGTTGGGGTAATAT+GGG | - | chr4_4:43926890-43926909 | Msa0682420:CDS | 50.0% |
GTTGGGGTAATATGGGTGGT+GGG | - | chr4_4:43926897-43926916 | Msa0682420:CDS | 50.0% | |
TTGGGGTAATATGGGTGGTG+GGG | - | chr4_4:43926898-43926917 | Msa0682420:CDS | 50.0% | |
! | GTGCTACTCCTTTCACTGCT+TGG | - | chr4_4:43926969-43926988 | Msa0682420:intron | 50.0% |
! | CCTTCTTCTGCAAAGCACCA+AGG | + | chr4_4:43927081-43927100 | None:intergenic | 50.0% |
!! | CCTTGGTGCTTTGCAGAAGA+AGG | - | chr4_4:43927078-43927097 | Msa0682420:intron | 50.0% |
ATAGTTGCTCGTCCTTTCGG+AGG | - | chr4_4:43927597-43927616 | Msa0682420:CDS | 50.0% | |
GCAAGATTATTCGGCATGCG+AGG | - | chr4_4:43927639-43927658 | Msa0682420:CDS | 50.0% | |
GATTATTCGGCATGCGAGGA+AGG | - | chr4_4:43927643-43927662 | Msa0682420:CDS | 50.0% | |
CTCTGGATCTTCCAAACCCT+AGG | - | chr4_4:43927675-43927694 | Msa0682420:CDS | 50.0% | |
TGGATCTTCCAAACCCTAGG+AGG | - | chr4_4:43927678-43927697 | Msa0682420:CDS | 50.0% | |
CTTGTGCTCCAACTGAGAAG+AGG | + | chr4_4:43927764-43927783 | None:intergenic | 50.0% | |
GCTGCATGTGGTGCAACATT+TGG | - | chr4_4:43927783-43927802 | Msa0682420:CDS | 50.0% | |
TCAGGTTTAACTGGTGCAGG+TGG | - | chr4_4:43927846-43927865 | Msa0682420:CDS | 50.0% | |
ACTGGTGCAGGTGGAAACTT+TGG | - | chr4_4:43927855-43927874 | Msa0682420:CDS | 50.0% | |
! | GCAGGTGGAAACTTTGGTTC+TGG | - | chr4_4:43927861-43927880 | Msa0682420:CDS | 50.0% |
GGTTGCATCAGCCAAGTCTT+AGG | - | chr4_4:43928090-43928109 | Msa0682420:CDS | 50.0% | |
TCACCAGGAAGCTCCATGCA+TGG | - | chr4_4:43926338-43926357 | Msa0682420:CDS | 55.0% | |
ACTCCATGCATGGAGCTTCC+TGG | + | chr4_4:43926344-43926363 | None:intergenic | 55.0% | |
GACTCCGGCGTTACCAACAT+CGG | + | chr4_4:43926615-43926634 | None:intergenic | 55.0% | |
ACCTGAAACCGAAGCGACTC+CGG | + | chr4_4:43926630-43926649 | None:intergenic | 55.0% | |
GCTGGTTGGGGTAATATGGG+TGG | - | chr4_4:43926893-43926912 | Msa0682420:CDS | 55.0% | |
GGTTGGGGTAATATGGGTGG+TGG | - | chr4_4:43926896-43926915 | Msa0682420:CDS | 55.0% | |
GAGGAAGGCTATGGACACTC+TGG | - | chr4_4:43927658-43927677 | Msa0682420:CDS | 55.0% | |
GTTGGAGCACAAGCTGCATG+TGG | - | chr4_4:43927771-43927790 | Msa0682420:CDS | 55.0% | |
AGGAACATGCTACCCCACTG+TGG | + | chr4_4:43927999-43928018 | None:intergenic | 55.0% | |
TCACCAGGAAGCTCCATGCA+TGG | - | chr4_4:43926338-43926357 | Msa0682420:CDS | 55.0% | |
ACTCCATGCATGGAGCTTCC+TGG | + | chr4_4:43926344-43926363 | None:intergenic | 55.0% | |
GACTCCGGCGTTACCAACAT+CGG | + | chr4_4:43926615-43926634 | None:intergenic | 55.0% | |
ACCTGAAACCGAAGCGACTC+CGG | + | chr4_4:43926630-43926649 | None:intergenic | 55.0% | |
GCTGGTTGGGGTAATATGGG+TGG | - | chr4_4:43926893-43926912 | Msa0682420:CDS | 55.0% | |
GGTTGGGGTAATATGGGTGG+TGG | - | chr4_4:43926896-43926915 | Msa0682420:CDS | 55.0% | |
GAGGAAGGCTATGGACACTC+TGG | - | chr4_4:43927658-43927677 | Msa0682420:CDS | 55.0% | |
GTTGGAGCACAAGCTGCATG+TGG | - | chr4_4:43927771-43927790 | Msa0682420:CDS | 55.0% | |
AGGAACATGCTACCCCACTG+TGG | + | chr4_4:43927999-43928018 | None:intergenic | 55.0% | |
! | TGGTAACGCCGGAGTCGCTT+CGG | - | chr4_4:43926619-43926638 | Msa0682420:CDS | 60.0% |
TCGGCATGCGAGGAAGGCTA+TGG | - | chr4_4:43927649-43927668 | Msa0682420:CDS | 60.0% | |
! | TGGTAACGCCGGAGTCGCTT+CGG | - | chr4_4:43926619-43926638 | Msa0682420:CDS | 60.0% |
TCGGCATGCGAGGAAGGCTA+TGG | - | chr4_4:43927649-43927668 | Msa0682420:CDS | 60.0% | |
GCCGGAGTCGCTTCGGTTTC+AGG | - | chr4_4:43926626-43926645 | Msa0682420:CDS | 65.0% | |
GCCGGAGTCGCTTCGGTTTC+AGG | - | chr4_4:43926626-43926645 | Msa0682420:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 43926320 | 43928193 | 43926320 | ID=Msa0682420;Name=Msa0682420 |
chr4_4 | mRNA | 43926320 | 43928193 | 43926320 | ID=Msa0682420-mRNA-1;Parent=Msa0682420;Name=Msa0682420-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|526 |
chr4_4 | exon | 43927384 | 43928193 | 43927384 | ID=Msa0682420-mRNA-1:exon:10645;Parent=Msa0682420-mRNA-1 |
chr4_4 | exon | 43927177 | 43927292 | 43927177 | ID=Msa0682420-mRNA-1:exon:10644;Parent=Msa0682420-mRNA-1 |
chr4_4 | exon | 43926320 | 43926974 | 43926320 | ID=Msa0682420-mRNA-1:exon:10643;Parent=Msa0682420-mRNA-1 |
chr4_4 | CDS | 43927384 | 43928193 | 43927384 | ID=Msa0682420-mRNA-1:cds;Parent=Msa0682420-mRNA-1 |
chr4_4 | CDS | 43927177 | 43927292 | 43927177 | ID=Msa0682420-mRNA-1:cds;Parent=Msa0682420-mRNA-1 |
chr4_4 | CDS | 43926320 | 43926974 | 43926320 | ID=Msa0682420-mRNA-1:cds;Parent=Msa0682420-mRNA-1 |
Gene Sequence |
Protein sequence |