Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863920 | XP_003617738.1 | 89.514 | 391 | 33 | 1 | 1 | 391 | 1 | 383 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863920 | G7K4I1 | 89.514 | 391 | 33 | 1 | 1 | 391 | 1 | 383 | 0.0 | 652 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0863920 | 0.821609 | 3.686349e-53 | -8.615850e-47 |
| Msa0052800 | Msa0863920 | 0.807211 | 5.645903e-50 | -8.615850e-47 |
| Msa0053780 | Msa0863920 | 0.801307 | 9.578986e-49 | -8.615850e-47 |
| Msa0068680 | Msa0863920 | 0.802984 | 4.327748e-49 | -8.615850e-47 |
| Msa0069330 | Msa0863920 | 0.800023 | 1.750878e-48 | -8.615850e-47 |
| Msa0104550 | Msa0863920 | 0.803462 | 3.447003e-49 | -8.615850e-47 |
| Msa0104800 | Msa0863920 | 0.802488 | 5.478701e-49 | -8.615850e-47 |
| Msa0110970 | Msa0863920 | 0.801920 | 7.168767e-49 | -8.615850e-47 |
| Msa0631200 | Msa0863920 | 0.801230 | 9.930395e-49 | -8.615850e-47 |
| Msa0638070 | Msa0863920 | 0.842193 | 3.002214e-58 | -8.615850e-47 |
| Msa0657580 | Msa0863920 | 0.808303 | 3.310157e-50 | -8.615850e-47 |
| Msa0657750 | Msa0863920 | 0.808611 | 2.844996e-50 | -8.615850e-47 |
| Msa0657970 | Msa0863920 | 0.805450 | 1.326988e-49 | -8.615850e-47 |
| Msa0669440 | Msa0863920 | 0.804626 | 1.973437e-49 | -8.615850e-47 |
| Msa0687020 | Msa0863920 | 0.814399 | 1.571311e-51 | -8.615850e-47 |
| Msa0692230 | Msa0863920 | 0.801984 | 6.956321e-49 | -8.615850e-47 |
| Msa0693380 | Msa0863920 | 0.807654 | 4.548533e-50 | -8.615850e-47 |
| Msa0743740 | Msa0863920 | 0.813917 | 2.007409e-51 | -8.615850e-47 |
| Msa0767220 | Msa0863920 | 0.817673 | 2.919212e-52 | -8.615850e-47 |
| Msa0790510 | Msa0863920 | 0.804121 | 2.514325e-49 | -8.615850e-47 |
| Msa0828920 | Msa0863920 | 0.805616 | 1.224889e-49 | -8.615850e-47 |
| Msa0148100 | Msa0863920 | 0.825329 | 4.974780e-54 | -8.615850e-47 |
| Msa0151180 | Msa0863920 | 0.809498 | 1.836997e-50 | -8.615850e-47 |
| Msa0157290 | Msa0863920 | 0.821971 | 3.039968e-53 | -8.615850e-47 |
| Msa0170570 | Msa0863920 | 0.819750 | 9.856338e-53 | -8.615850e-47 |
| Msa0173990 | Msa0863920 | 0.814163 | 1.771744e-51 | -8.615850e-47 |
| Msa0180500 | Msa0863920 | 0.800419 | 1.454107e-48 | -8.615850e-47 |
| Msa0205510 | Msa0863920 | 0.804660 | 1.941525e-49 | -8.615850e-47 |
| Msa0206010 | Msa0863920 | 0.800877 | 1.172550e-48 | -8.615850e-47 |
| Msa0216240 | Msa0863920 | 0.807366 | 5.235197e-50 | -8.615850e-47 |
| Msa0376350 | Msa0863920 | 0.803883 | 2.817830e-49 | -8.615850e-47 |
| Msa0410650 | Msa0863920 | 0.806384 | 8.445076e-50 | -8.615850e-47 |
| Msa0243100 | Msa0863920 | 0.817674 | 2.917865e-52 | -8.615850e-47 |
| Msa0259370 | Msa0863920 | 0.817448 | 3.280459e-52 | -8.615850e-47 |
| Msa0264150 | Msa0863920 | 0.810319 | 1.222666e-50 | -8.615850e-47 |
| Msa0270100 | Msa0863920 | 0.803830 | 2.891071e-49 | -8.615850e-47 |
| Msa0282250 | Msa0863920 | 0.807299 | 5.409205e-50 | -8.615850e-47 |
| Msa0287410 | Msa0863920 | 0.803572 | 3.269261e-49 | -8.615850e-47 |
| Msa0287650 | Msa0863920 | 0.829033 | 6.454299e-55 | -8.615850e-47 |
| Msa0319170 | Msa0863920 | 0.805213 | 1.487896e-49 | -8.615850e-47 |
| Msa0326110 | Msa0863920 | 0.802535 | 5.358037e-49 | -8.615850e-47 |
| Msa0484780 | Msa0863920 | 0.816569 | 5.168525e-52 | -8.615850e-47 |
| Msa0485120 | Msa0863920 | 0.809400 | 1.928473e-50 | -8.615850e-47 |
| Msa0507680 | Msa0863920 | 0.806788 | 6.938477e-50 | -8.615850e-47 |
| Msa0519000 | Msa0863920 | 0.804522 | 2.074424e-49 | -8.615850e-47 |
| Msa0545070 | Msa0863920 | 0.814172 | 1.764313e-51 | -8.615850e-47 |
| Msa0577500 | Msa0863920 | 0.810624 | 1.050881e-50 | -8.615850e-47 |
| Msa0863920 | Msa0869100 | 0.800390 | 1.474176e-48 | -8.615850e-47 |
| Msa0863920 | Msa0880140 | 0.820763 | 5.774685e-53 | -8.615850e-47 |
| Msa0863920 | Msa0896750 | 0.800442 | 1.438432e-48 | -8.615850e-47 |
| Msa0863920 | Msa0923330 | 0.800292 | 1.543137e-48 | -8.615850e-47 |
| Msa0863920 | Msa0933230 | 0.807464 | 4.990637e-50 | -8.615850e-47 |
| Msa0863920 | Msa0933310 | 0.810496 | 1.119719e-50 | -8.615850e-47 |
| Msa0863920 | Msa0936300 | 0.809191 | 2.137243e-50 | -8.615850e-47 |
| Msa0863920 | Msa0969520 | 0.829179 | 5.949747e-55 | -8.615850e-47 |
| Msa0863920 | Msa0971090 | 0.811283 | 7.565455e-51 | -8.615850e-47 |
| Msa0863920 | Msa1010350 | 0.803320 | 3.687883e-49 | -8.615850e-47 |
| Msa0863920 | Msa1023920 | 0.806989 | 6.293227e-50 | -8.615850e-47 |
| Msa0863920 | Msa1063950 | 0.802310 | 5.960572e-49 | -8.615850e-47 |
| Msa0863920 | Msa1082500 | 0.815550 | 8.729606e-52 | -8.615850e-47 |
| Msa0863920 | Msa1085200 | 0.808498 | 3.007003e-50 | -8.615850e-47 |
| Msa0863920 | Msa1097840 | 0.803721 | 3.045574e-49 | -8.615850e-47 |
| Msa0863920 | Msa1107900 | 0.804164 | 2.463154e-49 | -8.615850e-47 |
| Msa0863920 | Msa1131220 | 0.800392 | 1.472418e-48 | -8.615850e-47 |
| Msa0863920 | Msa1133710 | 0.801302 | 9.601577e-49 | -8.615850e-47 |
| Msa0863920 | Msa1151910 | 0.818620 | 1.782455e-52 | -8.615850e-47 |
| Msa0863920 | Msa1166560 | 0.800029 | 1.745598e-48 | -8.615850e-47 |
| Msa0863920 | Msa1173170 | 0.807922 | 3.988749e-50 | -8.615850e-47 |
| Msa0863920 | Msa1214020 | 0.811915 | 5.514602e-51 | -8.615850e-47 |
| Msa0863920 | Msa1214880 | 0.808288 | 3.334616e-50 | -8.615850e-47 |
| Msa0863920 | Msa1214890 | 0.821947 | 3.078613e-53 | -8.615850e-47 |
| Msa0863920 | Msa1233500 | 0.800566 | 1.357205e-48 | -8.615850e-47 |
| Msa0863920 | Msa1253020 | 0.800761 | 1.238655e-48 | -8.615850e-47 |
| Msa0863920 | Msa1303250 | 0.808965 | 2.389078e-50 | -8.615850e-47 |
| Msa0863920 | Msa1305340 | 0.807566 | 4.747504e-50 | -8.615850e-47 |
| Msa0863920 | Msa1305710 | 0.804036 | 2.618819e-49 | -8.615850e-47 |
| Msa0863920 | Msa1306840 | 0.811420 | 7.065537e-51 | -8.615850e-47 |
| Msa0863920 | Msa1306850 | 0.829240 | 5.749781e-55 | -8.615850e-47 |
| Msa0863920 | Msa1314340 | 0.809513 | 1.823439e-50 | -8.615850e-47 |
| Msa0863920 | Msa1320740 | 0.803998 | 2.667367e-49 | -8.615850e-47 |
| Msa0863920 | Msa1340650 | 0.802075 | 6.663721e-49 | -8.615850e-47 |
| Msa0863920 | Msa1359040 | 0.801094 | 1.058853e-48 | -8.615850e-47 |
| Msa0863920 | Msa1372760 | 0.810362 | 1.197310e-50 | -8.615850e-47 |
| Msa0863920 | Msa1407580 | 0.801687 | 8.004306e-49 | -8.615850e-47 |
| Msa0863920 | Msa1424450 | 0.810715 | 1.004248e-50 | -8.615850e-47 |
| Msa0863920 | Msa1429900 | 0.804800 | 1.815334e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863920 | MtrunA17_Chr5g0445811 | 86.986 | 292 | 30 | 1 | 1 | 292 | 1 | 284 | 1.67e-179 | 500 |
| Msa0863920 | MtrunA17_Chr5g0445881 | 49.684 | 475 | 147 | 13 | 1 | 390 | 1 | 468 | 1.20e-108 | 327 |
| Msa0863920 | MtrunA17_Chr5g0445831 | 67.391 | 230 | 49 | 3 | 75 | 289 | 197 | 415 | 7.01e-88 | 272 |
| Msa0863920 | MtrunA17_Chr5g0445831 | 50.000 | 246 | 51 | 5 | 1 | 213 | 1 | 207 | 1.75e-57 | 193 |
| Msa0863920 | MtrunA17_Chr5g0445771 | 42.264 | 530 | 139 | 15 | 3 | 391 | 1 | 504 | 2.15e-83 | 263 |
| Msa0863920 | MtrunA17_Chr5g0446181 | 38.596 | 456 | 130 | 20 | 1 | 391 | 1 | 371 | 1.05e-54 | 184 |
| Msa0863920 | MtrunA17_Chr5g0445861 | 37.681 | 414 | 125 | 10 | 1 | 282 | 1 | 413 | 4.15e-51 | 176 |
| Msa0863920 | MtrunA17_Chr5g0445801 | 90.741 | 108 | 10 | 0 | 284 | 391 | 3 | 110 | 6.80e-47 | 155 |
| Msa0863920 | MtrunA17_Chr5g0445821 | 67.890 | 109 | 30 | 2 | 284 | 391 | 3 | 107 | 5.30e-38 | 132 |
| Msa0863920 | MtrunA17_Chr5g0445871 | 44.286 | 210 | 70 | 6 | 223 | 390 | 1 | 205 | 1.96e-31 | 119 |
| Msa0863920 | MtrunA17_Chr5g0445961 | 37.872 | 235 | 94 | 5 | 42 | 243 | 167 | 382 | 6.33e-26 | 109 |
| Msa0863920 | MtrunA17_Chr5g0445961 | 31.599 | 269 | 108 | 8 | 1 | 199 | 1 | 263 | 1.17e-11 | 66.2 |
| Msa0863920 | MtrunA17_Chr5g0445851 | 62.832 | 113 | 35 | 2 | 284 | 391 | 3 | 113 | 2.25e-19 | 83.2 |
| Msa0863920 | MtrunA17_Chr5g0446171 | 31.250 | 240 | 96 | 9 | 1 | 218 | 1 | 193 | 8.97e-13 | 67.8 |
| Msa0863920 | MtrunA17_Chr1g0185261 | 53.012 | 83 | 29 | 2 | 186 | 258 | 106 | 188 | 1.14e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 61 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAATGAATGCTATTTA+TGG | 0.157301 | 5_4:+64028454 | Msa0863920:CDS |
| TGAATTAGAGTCTGAAATTT+TGG | 0.200999 | 5_4:+64025847 | Msa0863920:CDS |
| GATTAAAACTGGTGAGTTAA+AGG | 0.223103 | 5_4:+64026072 | Msa0863920:CDS |
| TGATGACCCAGGTTCGATTT+TGG | 0.247518 | 5_4:-64025525 | None:intergenic |
| GGAAACAATGAAGAAGAATT+TGG | 0.257020 | 5_4:+64026093 | Msa0863920:CDS |
| TAAATTAGAGCACGAGGTTT+TGG | 0.288164 | 5_4:+64025940 | Msa0863920:CDS |
| GCTGAAATTAAGATTAAAAC+TGG | 0.338214 | 5_4:+64026061 | Msa0863920:CDS |
| CGGACGGTTGAGATATTACT+TGG | 0.354529 | 5_4:+64026151 | Msa0863920:CDS |
| CGTCAGAAACATCCTCTTCC+TGG | 0.357072 | 5_4:-64026249 | None:intergenic |
| GTTAACCGCATTTGCAAACT+TGG | 0.363844 | 5_4:-64028536 | None:intergenic |
| GTAGATGCTCATCGCACTCT+TGG | 0.411937 | 5_4:+64026286 | Msa0863920:CDS |
| GGGAACAGTGAACATGAAAA+AGG | 0.418775 | 5_4:+64028366 | Msa0863920:CDS |
| TTCAAGTTTGTTGCTAGGGT+TGG | 0.426251 | 5_4:-64025555 | None:intergenic |
| TATCTTCAAGTTTGTTGCTA+GGG | 0.435539 | 5_4:-64025559 | None:intergenic |
| GGTTGAAGTTATGAATTTGA+AGG | 0.450314 | 5_4:+64025772 | Msa0863920:CDS |
| TTGAAGGAGAAACTTGTTGA+TGG | 0.453707 | 5_4:+64025788 | Msa0863920:CDS |
| ATCTTAACAAGGTCATGAAT+AGG | 0.459377 | 5_4:-64025584 | None:intergenic |
| CATCGTTGTTGTCGTTATCA+AGG | 0.462013 | 5_4:-64028405 | None:intergenic |
| ACAAAGCAGGGTTCGTGTAA+TGG | 0.465038 | 5_4:+64026018 | Msa0863920:CDS |
| GGAGGGTGATAAGAATGATT+TGG | 0.467049 | 5_4:+64026039 | Msa0863920:CDS |
| TTATCTTCAAGTTTGTTGCT+AGG | 0.469484 | 5_4:-64025560 | None:intergenic |
| GACATTAAATGAAGAGATGG+TGG | 0.484309 | 5_4:+64025877 | Msa0863920:CDS |
| CTTGCTCTGTAGCTGAGTAC+TGG | 0.490258 | 5_4:-64026317 | None:intergenic |
| AAAATGTATGAGAAAGGTAA+TGG | 0.491795 | 5_4:+64025707 | Msa0863920:CDS |
| GACGCTCAAGATGCATCATC+AGG | 0.492956 | 5_4:+64026340 | Msa0863920:CDS |
| GACTGGAAGAGTTTCAAGGT+TGG | 0.512261 | 5_4:+64026201 | Msa0863920:CDS |
| ATCATCAGAGGAAGAAGAAG+TGG | 0.517134 | 5_4:-64028599 | None:intergenic |
| AGTTTGTTGCTAGGGTTGGT+AGG | 0.527539 | 5_4:-64025551 | None:intergenic |
| GCTAGTGATGAACTTGGAGT+TGG | 0.533733 | 5_4:-64028499 | None:intergenic |
| ATTCAACCCAAAATCGAACC+TGG | 0.539946 | 5_4:+64025518 | Msa0863920:CDS |
| ACGACAACAACGATGATGAA+TGG | 0.543622 | 5_4:+64028413 | Msa0863920:CDS |
| GAATGACTGGAAGAGTTTCA+AGG | 0.544038 | 5_4:+64026197 | Msa0863920:CDS |
| TTCTTGATAATCTTACAAGA+AGG | 0.548649 | 5_4:+64028629 | Msa0863920:CDS |
| CTCGTGATGAGGTACAAAGC+AGG | 0.551200 | 5_4:+64026005 | Msa0863920:CDS |
| GAGGACATTAAATGAAGAGA+TGG | 0.556544 | 5_4:+64025874 | Msa0863920:CDS |
| TGAACTGCTAGTGATGAACT+TGG | 0.561399 | 5_4:-64028505 | None:intergenic |
| ACTCAGAGAGGAGTTTCACT+TGG | 0.562269 | 5_4:+64025637 | Msa0863920:CDS |
| AGGAACCAAGTTTGCAAATG+CGG | 0.569154 | 5_4:+64028531 | Msa0863920:CDS |
| ATTAAATGAAGAGATGGTGG+AGG | 0.581644 | 5_4:+64025880 | Msa0863920:CDS |
| ATCAGAGGAAGAAGAAGTGG+AGG | 0.583434 | 5_4:-64028596 | None:intergenic |
| AAGCAGGGTTCGTGTAATGG+AGG | 0.588505 | 5_4:+64026021 | Msa0863920:CDS |
| TGGAATTGCTGTGAAGAATG+AGG | 0.597222 | 5_4:+64028474 | Msa0863920:CDS |
| TTCACTTGGAAAGACTCTCA+AGG | 0.600450 | 5_4:+64025651 | Msa0863920:CDS |
| TCATCACTAGCAGTTCAACT+AGG | 0.607456 | 5_4:+64028511 | Msa0863920:CDS |
| AGCAGGGTTCGTGTAATGGA+GGG | 0.616655 | 5_4:+64026022 | Msa0863920:CDS |
| AAAGAAGAACAATGAACTAG+AGG | 0.622601 | 5_4:+64025751 | Msa0863920:CDS |
| CAGTACTCAGCTACAGAGCA+AGG | 0.625882 | 5_4:+64026318 | Msa0863920:CDS |
| TCGTGATGAGGTACAAAGCA+GGG | 0.629708 | 5_4:+64026006 | Msa0863920:CDS |
| AAGAAACAATGAATCATCAG+AGG | 0.630095 | 5_4:-64028611 | None:intergenic |
| TGAGAAAAGAAAATGATAAG+CGG | 0.633648 | 5_4:+64026131 | Msa0863920:CDS |
| GTTGTGCTAAGAGAAATGAT+TGG | 0.634304 | 5_4:+64025917 | Msa0863920:CDS |
| TTGGTAGGTGATGATGACCC+AGG | 0.634407 | 5_4:-64025536 | None:intergenic |
| AAAAGAAAATGATAAGCGGA+CGG | 0.636762 | 5_4:+64026135 | Msa0863920:CDS |
| TTCAACCCAAAATCGAACCT+GGG | 0.641655 | 5_4:+64025519 | Msa0863920:CDS |
| GGACGGTTGAGATATTACTT+GGG | 0.655123 | 5_4:+64026152 | Msa0863920:CDS |
| GATGAATGGTGTATGTCTCA+AGG | 0.659079 | 5_4:+64028427 | Msa0863920:CDS |
| GATTGGTAAATTAGAGCACG+AGG | 0.662647 | 5_4:+64025934 | Msa0863920:CDS |
| AAACACACAAAATCTTAACA+AGG | 0.692804 | 5_4:-64025595 | None:intergenic |
| TAATCTTACAAGAAGGTCTG+CGG | 0.693035 | 5_4:+64028636 | Msa0863920:CDS |
| TAGGGATTTGAGACTCAGAG+AGG | 0.711291 | 5_4:+64025625 | Msa0863920:CDS |
| TGATAGCAATGCTCGTGATG+AGG | 0.725632 | 5_4:+64025994 | Msa0863920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTAAATTCAATTTTTTTA+AGG | - | chr5_4:64026424-64026443 | None:intergenic | 10.0% |
| !!! | CAAAATTTTCATATCTTAAT+AGG | - | chr5_4:64026394-64026413 | None:intergenic | 15.0% |
| !!! | TAAATTCAATTTTTTTAAGG+TGG | - | chr5_4:64026421-64026440 | None:intergenic | 15.0% |
| !! | TAATTATAGATATTTCAATG+TGG | - | chr5_4:64027285-64027304 | None:intergenic | 15.0% |
| !! | TATTCAAATGAAAATATAGT+TGG | - | chr5_4:64028247-64028266 | None:intergenic | 15.0% |
| !!! | TAATATATCTCTTTTATGTT+AGG | + | chr5_4:64028340-64028359 | Msa0863920:intron | 15.0% |
| !!! | TGAAAATCTTGTTTGATTAT+GGG | + | chr5_4:64027168-64027187 | Msa0863920:intron | 20.0% |
| !!! | AAGATTTTCACTATATTTCT+TGG | - | chr5_4:64027962-64027981 | None:intergenic | 20.0% |
| !!! | TGAAAATCTTGTTAGATTTT+GGG | + | chr5_4:64027972-64027991 | Msa0863920:intron | 20.0% |
| !! | AAAAGAAACAACTTAAAAGA+TGG | - | chr5_4:64028067-64028086 | None:intergenic | 20.0% |
| !!! | GTTTTTCATTTTTGAGTTTT+GGG | - | chr5_4:64028098-64028117 | None:intergenic | 20.0% |
| ! | AAACACACAAAATCTTAACA+AGG | - | chr5_4:64025598-64025617 | None:intergenic | 25.0% |
| !! | TGTTAAGATTTTGTGTGTTT+TGG | + | chr5_4:64025598-64025617 | Msa0863920:CDS | 25.0% |
| ! | AGAGAAAAAATGTATGAGAA+AGG | + | chr5_4:64025701-64025720 | Msa0863920:CDS | 25.0% |
| ! | AAAATGTATGAGAAAGGTAA+TGG | + | chr5_4:64025707-64025726 | Msa0863920:CDS | 25.0% |
| !!! | TGAATTAGAGTCTGAAATTT+TGG | + | chr5_4:64025847-64025866 | Msa0863920:CDS | 25.0% |
| ! | GCTGAAATTAAGATTAAAAC+TGG | + | chr5_4:64026061-64026080 | Msa0863920:CDS | 25.0% |
| ! | TGAGAAAAGAAAATGATAAG+CGG | + | chr5_4:64026131-64026150 | Msa0863920:CDS | 25.0% |
| !! | TCTTTTTACAAAAAGTTCAG+AGG | + | chr5_4:64026175-64026194 | Msa0863920:CDS | 25.0% |
| ! | TCCATAATAACAACTTTCTT+CGG | - | chr5_4:64026938-64026957 | None:intergenic | 25.0% |
| !! | AAGAAAGTTGTTATTATGGA+AGG | + | chr5_4:64026938-64026957 | Msa0863920:intron | 25.0% |
| !! | AGAAAGTTGTTATTATGGAA+GGG | + | chr5_4:64026939-64026958 | Msa0863920:intron | 25.0% |
| !! | TTTCTCTTCAAGTTTATCAT+AGG | - | chr5_4:64027103-64027122 | None:intergenic | 25.0% |
| !! | TTAGACTCATTTTCTTTTCA+TGG | - | chr5_4:64027133-64027152 | None:intergenic | 25.0% |
| !! | AAGATTTTCACTAGATTTCT+TGG | - | chr5_4:64027158-64027177 | None:intergenic | 25.0% |
| !! | GTGAAAATCTTGTTTGATTA+TGG | + | chr5_4:64027167-64027186 | Msa0863920:intron | 25.0% |
| ! | GAAATGTTAGTAACTAGAAT+AGG | + | chr5_4:64027624-64027643 | Msa0863920:intron | 25.0% |
| !! | TTTCTCTTCAAGTTTATCAT+AGG | - | chr5_4:64027103-64027122 | None:intergenic | 25.0% |
| !! | GTGAAAATCTTGTTAGATTT+TGG | + | chr5_4:64027971-64027990 | Msa0863920:intron | 25.0% |
| !!! | CGTTTTTCATTTTTGAGTTT+TGG | - | chr5_4:64028099-64028118 | None:intergenic | 25.0% |
| !!! | AACTCATTTTGGTTTTTCTT+AGG | + | chr5_4:64028138-64028157 | Msa0863920:intron | 25.0% |
| !! | TATCTCTTTTATGTTAGGTA+AGG | + | chr5_4:64028345-64028364 | Msa0863920:intron | 25.0% |
| !! | ATCTCTTTTATGTTAGGTAA+GGG | + | chr5_4:64028346-64028365 | Msa0863920:intron | 25.0% |
| !! | CATGAAATGAATGCTATTTA+TGG | + | chr5_4:64028454-64028473 | Msa0863920:CDS | 25.0% |
| !! | TTCTTGATAATCTTACAAGA+AGG | + | chr5_4:64028629-64028648 | Msa0863920:CDS | 25.0% |
| !! | TATCTTCAAGTTTGTTGCTA+GGG | - | chr5_4:64025562-64025581 | None:intergenic | 30.0% |
| !! | TTATCTTCAAGTTTGTTGCT+AGG | - | chr5_4:64025563-64025582 | None:intergenic | 30.0% |
| ATCTTAACAAGGTCATGAAT+AGG | - | chr5_4:64025587-64025606 | None:intergenic | 30.0% | |
| AAAGAAGAACAATGAACTAG+AGG | + | chr5_4:64025751-64025770 | Msa0863920:CDS | 30.0% | |
| GGTTGAAGTTATGAATTTGA+AGG | + | chr5_4:64025772-64025791 | Msa0863920:CDS | 30.0% | |
| TGAGGAAGTTGAAGAAAAAA+TGG | + | chr5_4:64025966-64025985 | Msa0863920:CDS | 30.0% | |
| GATTAAAACTGGTGAGTTAA+AGG | + | chr5_4:64026072-64026091 | Msa0863920:CDS | 30.0% | |
| GGAAACAATGAAGAAGAATT+TGG | + | chr5_4:64026093-64026112 | Msa0863920:CDS | 30.0% | |
| AAAAGAAAATGATAAGCGGA+CGG | + | chr5_4:64026135-64026154 | Msa0863920:CDS | 30.0% | |
| !! | TACTAATTTTCAAGAGAACC+AGG | + | chr5_4:64026231-64026250 | Msa0863920:CDS | 30.0% |
| ATCAGGTATGGAAATTATGT+AGG | + | chr5_4:64026357-64026376 | Msa0863920:intron | 30.0% | |
| ! | TGAATTTAAAGCCAAAGAGT+AGG | + | chr5_4:64026433-64026452 | Msa0863920:intron | 30.0% |
| ATAACACATTTCCTACTCTT+TGG | - | chr5_4:64026447-64026466 | None:intergenic | 30.0% | |
| GTGTTATAATTTCTTTGAGC+TGG | + | chr5_4:64026460-64026479 | Msa0863920:intron | 30.0% | |
| TCTTAGGTAACATGGAATAA+AGG | - | chr5_4:64026606-64026625 | None:intergenic | 30.0% | |
| TCAAATCAATTCATTATGGC+GGG | - | chr5_4:64026745-64026764 | None:intergenic | 30.0% | |
| GTCAAATCAATTCATTATGG+CGG | - | chr5_4:64026746-64026765 | None:intergenic | 30.0% | |
| CACGTCAAATCAATTCATTA+TGG | - | chr5_4:64026749-64026768 | None:intergenic | 30.0% | |
| !! | TGAATTGATTTGACGTGTAT+TGG | + | chr5_4:64026752-64026771 | Msa0863920:intron | 30.0% |
| !! | TTGTAGAACAAACTTGTTGA+GGG | + | chr5_4:64026780-64026799 | Msa0863920:intron | 30.0% |
| GTGATGTTAGTAACTAGAAT+AGG | + | chr5_4:64026832-64026851 | Msa0863920:intron | 30.0% | |
| !! | GAAAGAGTATTGGATAAGAA+TGG | + | chr5_4:64026994-64027013 | Msa0863920:intron | 30.0% |
| TTGGATAAGAATGGTTATGT+AGG | + | chr5_4:64027003-64027022 | Msa0863920:intron | 30.0% | |
| TGGATAAGAATGGTTATGTA+GGG | + | chr5_4:64027004-64027023 | Msa0863920:intron | 30.0% | |
| ATCCTTTGAATGTTCATCTT+GGG | - | chr5_4:64027072-64027091 | None:intergenic | 30.0% | |
| TATCCTTTGAATGTTCATCT+TGG | - | chr5_4:64027073-64027092 | None:intergenic | 30.0% | |
| AAGATGAACATTCAAAGGAT+AGG | + | chr5_4:64027072-64027091 | Msa0863920:intron | 30.0% | |
| ! | ACTCATTTTCTTTTCATGGA+GGG | - | chr5_4:64027129-64027148 | None:intergenic | 30.0% |
| ! | TCCTAAAACATTTTATCCAC+CGG | - | chr5_4:64027209-64027228 | None:intergenic | 30.0% |
| !! | GTGTTATAATTTGTTTGAGC+TGG | + | chr5_4:64027234-64027253 | Msa0863920:intron | 30.0% |
| CAATTAGCACTTGGATATTA+TGG | + | chr5_4:64027350-64027369 | Msa0863920:intron | 30.0% | |
| ! | AGCTGAATATGATTTTCCTA+TGG | + | chr5_4:64027445-64027464 | Msa0863920:intron | 30.0% |
| ! | AATGCTACTTCTATTTCCAT+AGG | - | chr5_4:64027464-64027483 | None:intergenic | 30.0% |
| ! | ATTTGTTTGAGGTAAAGTTC+CGG | - | chr5_4:64027489-64027508 | None:intergenic | 30.0% |
| ACTTTACCTCAAACAAATCT+TGG | + | chr5_4:64027491-64027510 | Msa0863920:intron | 30.0% | |
| ! | TTAGAACCAAGATTTGTTTG+AGG | - | chr5_4:64027500-64027519 | None:intergenic | 30.0% |
| !! | TCAAACAAATCTTGGTTCTA+AGG | + | chr5_4:64027499-64027518 | Msa0863920:intron | 30.0% |
| !! | CAAACAAATCTTGGTTCTAA+GGG | + | chr5_4:64027500-64027519 | Msa0863920:intron | 30.0% |
| TCAAATCAATTCATTATGGC+AGG | - | chr5_4:64026745-64026764 | None:intergenic | 30.0% | |
| CACGTCAAATCAATTCATTA+TGG | - | chr5_4:64026749-64026768 | None:intergenic | 30.0% | |
| !! | TGAATTGATTTGACGTGTAT+TGG | + | chr5_4:64026752-64026771 | Msa0863920:intron | 30.0% |
| ! | TTAGACTCGTTTTCTTTTCA+CGG | - | chr5_4:64027937-64027956 | None:intergenic | 30.0% |
| ATGAAAAACGAAACAAAAGC+AGG | + | chr5_4:64028109-64028128 | Msa0863920:intron | 30.0% | |
| AAGCAAAAACATGGAAACTA+AGG | - | chr5_4:64028283-64028302 | None:intergenic | 30.0% | |
| ATAACACTCAAGCAAAAACA+TGG | - | chr5_4:64028292-64028311 | None:intergenic | 30.0% | |
| AAGAAACAATGAATCATCAG+AGG | - | chr5_4:64028614-64028633 | None:intergenic | 30.0% | |
| !!! | TTTTGTGTGTTTTGGAGAGT+AGG | + | chr5_4:64025606-64025625 | Msa0863920:CDS | 35.0% |
| !!! | TTTGTGTGTTTTGGAGAGTA+GGG | + | chr5_4:64025607-64025626 | Msa0863920:CDS | 35.0% |
| !! | TTGAAGGAGAAACTTGTTGA+TGG | + | chr5_4:64025788-64025807 | Msa0863920:CDS | 35.0% |
| !!! | AGTCTGAAATTTTGGAGTTG+AGG | + | chr5_4:64025855-64025874 | Msa0863920:CDS | 35.0% |
| GAGGACATTAAATGAAGAGA+TGG | + | chr5_4:64025874-64025893 | Msa0863920:CDS | 35.0% | |
| GACATTAAATGAAGAGATGG+TGG | + | chr5_4:64025877-64025896 | Msa0863920:CDS | 35.0% | |
| ! | ATTAAATGAAGAGATGGTGG+AGG | + | chr5_4:64025880-64025899 | Msa0863920:CDS | 35.0% |
| GTTGTGCTAAGAGAAATGAT+TGG | + | chr5_4:64025917-64025936 | Msa0863920:CDS | 35.0% | |
| ! | TAAATTAGAGCACGAGGTTT+TGG | + | chr5_4:64025940-64025959 | Msa0863920:CDS | 35.0% |
| AAAAAGTTCAGAGGAATGAC+TGG | + | chr5_4:64026184-64026203 | Msa0863920:CDS | 35.0% | |
| ACATGGAATAAAGGTAAAGC+CGG | - | chr5_4:64026597-64026616 | None:intergenic | 35.0% | |
| CTTGTTTGTCTTAGGTAACA+TGG | - | chr5_4:64026614-64026633 | None:intergenic | 35.0% | |
| GGAAAATCACATACAGCTAA+AGG | - | chr5_4:64026648-64026667 | None:intergenic | 35.0% | |
| ! | AGCTGTATGTGATTTTCCAA+TGG | + | chr5_4:64026650-64026669 | Msa0863920:intron | 35.0% |
| ! | AATGCTGCTTCTATTTCCAT+TGG | - | chr5_4:64026669-64026688 | None:intergenic | 35.0% |
| ! | CTCAAACAAATCTTGGTTCT+GGG | + | chr5_4:64026706-64026725 | Msa0863920:intron | 35.0% |
| !! | TCAAACAAATCTTGGTTCTG+GGG | + | chr5_4:64026707-64026726 | Msa0863920:intron | 35.0% |
| AAATCAATTCATTATGGCGG+GGG | - | chr5_4:64026743-64026762 | None:intergenic | 35.0% | |
| CAAATCAATTCATTATGGCG+GGG | - | chr5_4:64026744-64026763 | None:intergenic | 35.0% | |
| !! | GTTGTAGAACAAACTTGTTG+AGG | + | chr5_4:64026779-64026798 | Msa0863920:intron | 35.0% |
| AACAACACTCATGACACAAT+TGG | - | chr5_4:64026887-64026906 | None:intergenic | 35.0% | |
| ! | TGTCATGAGTGTTGTTCAAA+GGG | + | chr5_4:64026891-64026910 | Msa0863920:intron | 35.0% |
| ! | GCCGAAGAAAGTTGTTATTA+TGG | + | chr5_4:64026934-64026953 | Msa0863920:intron | 35.0% |
| GGATAAGAATGGTTATGTAG+GGG | + | chr5_4:64027005-64027024 | Msa0863920:intron | 35.0% | |
| ! | GTTGATTTCGTTGCATACTT+TGG | - | chr5_4:64027050-64027069 | None:intergenic | 35.0% |
| AACCCAAGATGAACATTCAA+AGG | + | chr5_4:64027067-64027086 | Msa0863920:intron | 35.0% | |
| ! | GACTCATTTTCTTTTCATGG+AGG | - | chr5_4:64027130-64027149 | None:intergenic | 35.0% |
| ! | TTTGATTATGGGTTGACGTT+TGG | + | chr5_4:64027179-64027198 | Msa0863920:intron | 35.0% |
| !! | ATAATTTGTTTGAGCTGGTG+AGG | + | chr5_4:64027239-64027258 | Msa0863920:intron | 35.0% |
| ACAGAAACTCAATTAGCACT+TGG | + | chr5_4:64027341-64027360 | Msa0863920:intron | 35.0% | |
| !!! | AAGCTTTTTCATTCCTCTCT+CGG | + | chr5_4:64027394-64027413 | Msa0863920:intron | 35.0% |
| AAAAGAGAGCCATGGAATAA+AGG | - | chr5_4:64027425-64027444 | None:intergenic | 35.0% | |
| !! | GAAATAGAAGTAGCATTGAC+CGG | + | chr5_4:64027467-64027486 | Msa0863920:intron | 35.0% |
| AACCCAAGATGAACATTCAA+GGG | + | chr5_4:64027067-64027086 | Msa0863920:intron | 35.0% | |
| ATCCCTTGAATGTTCATCTT+GGG | - | chr5_4:64027876-64027895 | None:intergenic | 35.0% | |
| TATCCCTTGAATGTTCATCT+TGG | - | chr5_4:64027877-64027896 | None:intergenic | 35.0% | |
| AAGATGAACATTCAAGGGAT+AGG | + | chr5_4:64027876-64027895 | Msa0863920:intron | 35.0% | |
| ! | GCAGGTAACAAAACTCATTT+TGG | + | chr5_4:64028127-64028146 | Msa0863920:intron | 35.0% |
| TCTTAGGTAAACATGATCAC+AGG | + | chr5_4:64028154-64028173 | Msa0863920:intron | 35.0% | |
| TGCTTGAGTGTTATCATGTT+TGG | + | chr5_4:64028298-64028317 | Msa0863920:intron | 35.0% | |
| TAATCTTACAAGAAGGTCTG+CGG | + | chr5_4:64028636-64028655 | Msa0863920:CDS | 35.0% | |
| ATTCAACCCAAAATCGAACC+TGG | + | chr5_4:64025518-64025537 | Msa0863920:CDS | 40.0% | |
| TTCAACCCAAAATCGAACCT+GGG | + | chr5_4:64025519-64025538 | Msa0863920:CDS | 40.0% | |
| !! | TTCAAGTTTGTTGCTAGGGT+TGG | - | chr5_4:64025558-64025577 | None:intergenic | 40.0% |
| TTCACTTGGAAAGACTCTCA+AGG | + | chr5_4:64025651-64025670 | Msa0863920:CDS | 40.0% | |
| GATTGGTAAATTAGAGCACG+AGG | + | chr5_4:64025934-64025953 | Msa0863920:CDS | 40.0% | |
| GGAGGGTGATAAGAATGATT+TGG | + | chr5_4:64026039-64026058 | Msa0863920:CDS | 40.0% | |
| GGACGGTTGAGATATTACTT+GGG | + | chr5_4:64026152-64026171 | Msa0863920:CDS | 40.0% | |
| GAATGACTGGAAGAGTTTCA+AGG | + | chr5_4:64026197-64026216 | Msa0863920:CDS | 40.0% | |
| !! | TTTTCAAGAGAACCAGGAAG+AGG | + | chr5_4:64026237-64026256 | Msa0863920:CDS | 40.0% |
| TCAAGATGCATCATCAGGTA+TGG | + | chr5_4:64026345-64026364 | Msa0863920:intron | 40.0% | |
| CGACTAGCACTAGGATATTA+TGG | + | chr5_4:64026531-64026550 | Msa0863920:intron | 40.0% | |
| CATGGAATAAAGGTAAAGCC+GGG | - | chr5_4:64026596-64026615 | None:intergenic | 40.0% | |
| !! | GGCAATAGCTTGTTTGTCTT+AGG | - | chr5_4:64026622-64026641 | None:intergenic | 40.0% |
| ATCACATACAGCTAAAGGAG+AGG | - | chr5_4:64026643-64026662 | None:intergenic | 40.0% | |
| GTGGAACCTCAAACAAATCT+TGG | + | chr5_4:64026699-64026718 | Msa0863920:intron | 40.0% | |
| ! | CCAGAACCAAGATTTGTTTG+AGG | - | chr5_4:64026708-64026727 | None:intergenic | 40.0% |
| CCTCAAACAAATCTTGGTTC+TGG | + | chr5_4:64026705-64026724 | Msa0863920:intron | 40.0% | |
| ! | AATCAATTCATTATGGCGGG+GGG | - | chr5_4:64026742-64026761 | None:intergenic | 40.0% |
| ! | GTGTCATGAGTGTTGTTCAA+AGG | + | chr5_4:64026890-64026909 | Msa0863920:intron | 40.0% |
| GTTATTATGGAAGGGTCTAG+TGG | + | chr5_4:64026947-64026966 | Msa0863920:intron | 40.0% | |
| TAAGAATGGTTATGTAGGGG+AGG | + | chr5_4:64027008-64027027 | Msa0863920:intron | 40.0% | |
| GTTATGTAGGGGAGGTTAAA+TGG | + | chr5_4:64027016-64027035 | Msa0863920:intron | 40.0% | |
| ! | GCCGGTGGATAAAATGTTTT+AGG | + | chr5_4:64027205-64027224 | Msa0863920:intron | 40.0% |
| ATTCAGCTAAAAGAGAGCCA+TGG | - | chr5_4:64027433-64027452 | None:intergenic | 40.0% | |
| !! | GTTGTAGAGCAAACTTGTTG+AGG | + | chr5_4:64027569-64027588 | Msa0863920:intron | 40.0% |
| !! | AACTTGTTGAGGAAGCTACT+TGG | + | chr5_4:64027580-64027599 | Msa0863920:intron | 40.0% |
| GTCGTAACAACCACTTTCTT+CGG | - | chr5_4:64027726-64027745 | None:intergenic | 40.0% | |
| AAGAAAGTGGTTGTTACGAC+AGG | + | chr5_4:64027726-64027745 | Msa0863920:intron | 40.0% | |
| ! | TTGTTACGACAGGTTCTAGT+GGG | + | chr5_4:64027736-64027755 | Msa0863920:intron | 40.0% |
| ! | TTGTAGCGTCGAAATGATAG+TGG | + | chr5_4:64027768-64027787 | Msa0863920:intron | 40.0% |
| GTTGATTGCATGGCTTACTT+TGG | - | chr5_4:64027854-64027873 | None:intergenic | 40.0% | |
| !! | TTCATCTTGGGTTGATTGCA+TGG | - | chr5_4:64027864-64027883 | None:intergenic | 40.0% |
| CAACCCAAGATGAACATTCA+AGG | + | chr5_4:64027066-64027085 | Msa0863920:intron | 40.0% | |
| ! | ACTCGTTTTCTTTTCACGGA+CGG | - | chr5_4:64027933-64027952 | None:intergenic | 40.0% |
| GGGAACAGTGAACATGAAAA+AGG | + | chr5_4:64028366-64028385 | Msa0863920:CDS | 40.0% | |
| CATCGTTGTTGTCGTTATCA+AGG | - | chr5_4:64028408-64028427 | None:intergenic | 40.0% | |
| ACGACAACAACGATGATGAA+TGG | + | chr5_4:64028413-64028432 | Msa0863920:CDS | 40.0% | |
| GATGAATGGTGTATGTCTCA+AGG | + | chr5_4:64028427-64028446 | Msa0863920:CDS | 40.0% | |
| TGGAATTGCTGTGAAGAATG+AGG | + | chr5_4:64028474-64028493 | Msa0863920:CDS | 40.0% | |
| TGAACTGCTAGTGATGAACT+TGG | - | chr5_4:64028508-64028527 | None:intergenic | 40.0% | |
| TCATCACTAGCAGTTCAACT+AGG | + | chr5_4:64028511-64028530 | Msa0863920:CDS | 40.0% | |
| AGGAACCAAGTTTGCAAATG+CGG | + | chr5_4:64028531-64028550 | Msa0863920:CDS | 40.0% | |
| GTTAACCGCATTTGCAAACT+TGG | - | chr5_4:64028539-64028558 | None:intergenic | 40.0% | |
| ATCATCAGAGGAAGAAGAAG+TGG | - | chr5_4:64028602-64028621 | None:intergenic | 40.0% | |
| ! | GATGACCCAGGTTCGATTTT+GGG | - | chr5_4:64025527-64025546 | None:intergenic | 45.0% |
| ! | TGATGACCCAGGTTCGATTT+TGG | - | chr5_4:64025528-64025547 | None:intergenic | 45.0% |
| !! | AGTTTGTTGCTAGGGTTGGT+AGG | - | chr5_4:64025554-64025573 | None:intergenic | 45.0% |
| ! | TAGGGATTTGAGACTCAGAG+AGG | + | chr5_4:64025625-64025644 | Msa0863920:CDS | 45.0% |
| ACTCAGAGAGGAGTTTCACT+TGG | + | chr5_4:64025637-64025656 | Msa0863920:CDS | 45.0% | |
| TGATAGCAATGCTCGTGATG+AGG | + | chr5_4:64025994-64026013 | Msa0863920:CDS | 45.0% | |
| TCGTGATGAGGTACAAAGCA+GGG | + | chr5_4:64026006-64026025 | Msa0863920:CDS | 45.0% | |
| ACAAAGCAGGGTTCGTGTAA+TGG | + | chr5_4:64026018-64026037 | Msa0863920:CDS | 45.0% | |
| CGGACGGTTGAGATATTACT+TGG | + | chr5_4:64026151-64026170 | Msa0863920:CDS | 45.0% | |
| GACTGGAAGAGTTTCAAGGT+TGG | + | chr5_4:64026201-64026220 | Msa0863920:CDS | 45.0% | |
| AATAAAGGTAAAGCCGGGAG+AGG | - | chr5_4:64026591-64026610 | None:intergenic | 45.0% | |
| !! | AGCAGCATTGACAAGAACTG+TGG | + | chr5_4:64026680-64026699 | Msa0863920:intron | 45.0% |
| ! | CATGAGTGTTGTTCAAAGGG+TGG | + | chr5_4:64026894-64026913 | Msa0863920:intron | 45.0% |
| ! | AGTGTTGTTCAAAGGGTGGA+TGG | + | chr5_4:64026898-64026917 | Msa0863920:intron | 45.0% |
| ! | GTAGCGTCGAGAAAGAGTAT+TGG | + | chr5_4:64026984-64027003 | Msa0863920:intron | 45.0% |
| AATAAAGGTGAAGCCGAGAG+AGG | - | chr5_4:64027410-64027429 | None:intergenic | 45.0% | |
| TCGGCTTCACCTTTATTCCA+TGG | + | chr5_4:64027413-64027432 | Msa0863920:intron | 45.0% | |
| ! | ACCAAGTGTGTCACTGTCAT+GGG | + | chr5_4:64027675-64027694 | Msa0863920:intron | 45.0% |
| ! | GTTGTTACGACAGGTTCTAG+TGG | + | chr5_4:64027735-64027754 | Msa0863920:intron | 45.0% |
| GGATTGTCCTAGAAATGTCG+CGG | + | chr5_4:64028218-64028237 | Msa0863920:intron | 45.0% | |
| GCTAGTGATGAACTTGGAGT+TGG | - | chr5_4:64028502-64028521 | None:intergenic | 45.0% | |
| ATCAGAGGAAGAAGAAGTGG+AGG | - | chr5_4:64028599-64028618 | None:intergenic | 45.0% | |
| !!! | TCATATATATATATATATTT+TGG | + | chr5_4:64028197-64028216 | Msa0863920:intron | 5.0% |
| ! | TTGGTAGGTGATGATGACCC+AGG | - | chr5_4:64025539-64025558 | None:intergenic | 50.0% |
| !!! | AGCACGAGGTTTTGGAGTTG+AGG | + | chr5_4:64025948-64025967 | Msa0863920:CDS | 50.0% |
| CTCGTGATGAGGTACAAAGC+AGG | + | chr5_4:64026005-64026024 | Msa0863920:CDS | 50.0% | |
| AAGCAGGGTTCGTGTAATGG+AGG | + | chr5_4:64026021-64026040 | Msa0863920:CDS | 50.0% | |
| ! | AGCAGGGTTCGTGTAATGGA+GGG | + | chr5_4:64026022-64026041 | Msa0863920:CDS | 50.0% |
| CGTCAGAAACATCCTCTTCC+TGG | - | chr5_4:64026252-64026271 | None:intergenic | 50.0% | |
| GTAGATGCTCATCGCACTCT+TGG | + | chr5_4:64026286-64026305 | Msa0863920:CDS | 50.0% | |
| CTTGCTCTGTAGCTGAGTAC+TGG | - | chr5_4:64026320-64026339 | None:intergenic | 50.0% | |
| CAGTACTCAGCTACAGAGCA+AGG | + | chr5_4:64026318-64026337 | Msa0863920:CDS | 50.0% | |
| GACGCTCAAGATGCATCATC+AGG | + | chr5_4:64026340-64026359 | Msa0863920:CDS | 50.0% | |
| ACAGAGACTCGACTAGCACT+AGG | + | chr5_4:64026522-64026541 | Msa0863920:intron | 50.0% | |
| AAGCCTGTTCATTCCTCTCC+CGG | + | chr5_4:64026575-64026594 | Msa0863920:intron | 50.0% | |
| GGTGGATGGTATGAGCAAGA+AGG | + | chr5_4:64026912-64026931 | Msa0863920:intron | 50.0% | |
| ! | TGGGTTGACGTTTGGTTAGC+CGG | + | chr5_4:64027187-64027206 | Msa0863920:intron | 50.0% |
| GAGGCTGCTAGTGATTGAAC+TGG | + | chr5_4:64027258-64027277 | Msa0863920:intron | 50.0% | |
| ! | GACCAAGTGTGTCACTGTCA+TGG | + | chr5_4:64027674-64027693 | Msa0863920:intron | 50.0% |
| ACCCATGACAGTGACACACT+TGG | - | chr5_4:64027679-64027698 | None:intergenic | 50.0% | |
| CTGTCATGGGTGTGGTTCAT+AGG | + | chr5_4:64027688-64027707 | Msa0863920:intron | 50.0% | |
| TGGTTCATAGGCTGGATGGA+AGG | + | chr5_4:64027700-64027719 | Msa0863920:intron | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | + | chr5_4:64027792-64027811 | Msa0863920:intron | 50.0% | |
| TGTGTGTGTGTGTGTGTGGT+GGG | + | chr5_4:64027802-64027821 | Msa0863920:intron | 50.0% | |
| TTGGTTGCCGCGACATTTCT+AGG | - | chr5_4:64028228-64028247 | None:intergenic | 50.0% | |
| GGGAGAGGAATGAACAGGCT+TGG | - | chr5_4:64026576-64026595 | None:intergenic | 55.0% | |
| AAGCCGGGAGAGGAATGAAC+AGG | - | chr5_4:64026581-64026600 | None:intergenic | 55.0% | |
| ! | GTTGACGTTTGGTTAGCCGG+TGG | + | chr5_4:64027190-64027209 | Msa0863920:intron | 55.0% |
| ! | GTGTGTCACTGTCATGGGTG+TGG | + | chr5_4:64027680-64027699 | Msa0863920:intron | 55.0% |
| CATGGGTGTGGTTCATAGGC+TGG | + | chr5_4:64027692-64027711 | Msa0863920:intron | 55.0% | |
| GGTGTGGTTCATAGGCTGGA+TGG | + | chr5_4:64027696-64027715 | Msa0863920:intron | 55.0% | |
| GGATGGAAGGCCGAAGAAAG+TGG | + | chr5_4:64027713-64027732 | Msa0863920:intron | 55.0% | |
| GTGTGTGTGTGTGTGTGTGG+TGG | + | chr5_4:64027801-64027820 | Msa0863920:intron | 55.0% | |
| GTGTGTGTGTGTGTGTGGTG+GGG | + | chr5_4:64027803-64027822 | Msa0863920:intron | 55.0% | |
| TGTGTGTGTGTGTGTGGTGG+GGG | + | chr5_4:64027804-64027823 | Msa0863920:intron | 55.0% | |
| ! | GTGTGTGTGTGTGTGGTGGG+GGG | + | chr5_4:64027805-64027824 | Msa0863920:intron | 60.0% |
| ! | TGTGTGTGTGTGTGGTGGGG+GGG | + | chr5_4:64027806-64027825 | Msa0863920:intron | 60.0% |
| !! | GTGGGGGGGGGGTGTTTAAA+TGG | + | chr5_4:64027820-64027839 | Msa0863920:intron | 60.0% |
| ! | GTGTGTGTGTGTGGTGGGGG+GGG | + | chr5_4:64027807-64027826 | Msa0863920:intron | 65.0% |
| ! | TGTGTGTGTGTGGTGGGGGG+GGG | + | chr5_4:64027808-64027827 | Msa0863920:intron | 65.0% |
| ! | GTGTGTGTGTGGTGGGGGGG+GGG | + | chr5_4:64027809-64027828 | Msa0863920:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 64025512 | 64028687 | 64025512 | ID=Msa0863920;Name=Msa0863920 |
| chr5_4 | mRNA | 64025512 | 64028687 | 64025512 | ID=Msa0863920-mRNA-1;Parent=Msa0863920;Name=Msa0863920-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|2|0|391 |
| chr5_4 | exon | 64025512 | 64026361 | 64025512 | ID=Msa0863920-mRNA-1:exon:20128;Parent=Msa0863920-mRNA-1 |
| chr5_4 | exon | 64028362 | 64028687 | 64028362 | ID=Msa0863920-mRNA-1:exon:20129;Parent=Msa0863920-mRNA-1 |
| chr5_4 | CDS | 64025512 | 64026361 | 64025512 | ID=Msa0863920-mRNA-1:cds;Parent=Msa0863920-mRNA-1 |
| chr5_4 | CDS | 64028362 | 64028687 | 64028362 | ID=Msa0863920-mRNA-1:cds;Parent=Msa0863920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
