Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932960 | XP_003618155.1 | 97.222 | 504 | 14 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1013 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932960 | sp|Q5ZJW8|DTL_CHICK | 35.501 | 369 | 203 | 5 | 48 | 396 | 43 | 396 | 1.97e-66 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932960 | G7KQ08 | 97.222 | 504 | 14 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1013 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa0932960 | 0.829323 | 5.490560e-55 | -8.615850e-47 |
| Msa0020540 | Msa0932960 | 0.802809 | 4.703975e-49 | -8.615850e-47 |
| Msa0032980 | Msa0932960 | 0.813238 | 2.832536e-51 | -8.615850e-47 |
| Msa0053070 | Msa0932960 | 0.819949 | 8.875680e-53 | -8.615850e-47 |
| Msa0062340 | Msa0932960 | 0.803497 | 3.389420e-49 | -8.615850e-47 |
| Msa0068150 | Msa0932960 | 0.817858 | 2.651098e-52 | -8.615850e-47 |
| Msa0098410 | Msa0932960 | 0.807362 | 5.246376e-50 | -8.615850e-47 |
| Msa0115550 | Msa0932960 | 0.815921 | 7.214529e-52 | -8.615850e-47 |
| Msa0606100 | Msa0932960 | 0.829245 | 5.732936e-55 | -8.615850e-47 |
| Msa0607800 | Msa0932960 | 0.812964 | 3.252379e-51 | -8.615850e-47 |
| Msa0620500 | Msa0932960 | 0.810783 | 9.710144e-51 | -8.615850e-47 |
| Msa0621710 | Msa0932960 | 0.820412 | 6.952790e-53 | -8.615850e-47 |
| Msa0630660 | Msa0932960 | 0.805619 | 1.223378e-49 | -8.615850e-47 |
| Msa0647050 | Msa0932960 | 0.823725 | 1.186626e-53 | -8.615850e-47 |
| Msa0668900 | Msa0932960 | 0.822196 | 2.695437e-53 | -8.615850e-47 |
| Msa0690740 | Msa0932960 | 0.803756 | 2.994978e-49 | -8.615850e-47 |
| Msa0698730 | Msa0932960 | 0.811739 | 6.022006e-51 | -8.615850e-47 |
| Msa0703600 | Msa0932960 | 0.804670 | 1.932607e-49 | -8.615850e-47 |
| Msa0709200 | Msa0932960 | 0.803235 | 3.839791e-49 | -8.615850e-47 |
| Msa0709440 | Msa0932960 | 0.825563 | 4.377501e-54 | -8.615850e-47 |
| Msa0714520 | Msa0932960 | 0.808972 | 2.381217e-50 | -8.615850e-47 |
| Msa0735780 | Msa0932960 | 0.823376 | 1.432024e-53 | -8.615850e-47 |
| Msa0743440 | Msa0932960 | 0.813322 | 2.714543e-51 | -8.615850e-47 |
| Msa0747740 | Msa0932960 | 0.822480 | 2.315838e-53 | -8.615850e-47 |
| Msa0758650 | Msa0932960 | 0.803585 | 3.250188e-49 | -8.615850e-47 |
| Msa0773630 | Msa0932960 | 0.812482 | 4.147244e-51 | -8.615850e-47 |
| Msa0800660 | Msa0932960 | 0.812445 | 4.225501e-51 | -8.615850e-47 |
| Msa0811020 | Msa0932960 | 0.809324 | 2.001351e-50 | -8.615850e-47 |
| Msa0818880 | Msa0932960 | 0.818104 | 2.333093e-52 | -8.615850e-47 |
| Msa0824450 | Msa0932960 | 0.811074 | 8.398706e-51 | -8.615850e-47 |
| Msa0122330 | Msa0932960 | 0.802710 | 4.929579e-49 | -8.615850e-47 |
| Msa0127680 | Msa0932960 | 0.816748 | 4.712922e-52 | -8.615850e-47 |
| Msa0140380 | Msa0932960 | 0.819318 | 1.237118e-52 | -8.615850e-47 |
| Msa0159590 | Msa0932960 | 0.813014 | 3.171664e-51 | -8.615850e-47 |
| Msa0200050 | Msa0932960 | 0.807232 | 5.589219e-50 | -8.615850e-47 |
| Msa0209980 | Msa0932960 | 0.805184 | 1.509023e-49 | -8.615850e-47 |
| Msa0373500 | Msa0932960 | 0.832008 | 1.207611e-55 | -8.615850e-47 |
| Msa0422050 | Msa0932960 | 0.809102 | 2.233703e-50 | -8.615850e-47 |
| Msa0432010 | Msa0932960 | 0.811721 | 6.076006e-51 | -8.615850e-47 |
| Msa0433150 | Msa0932960 | 0.806595 | 7.621090e-50 | -8.615850e-47 |
| Msa0481890 | Msa0932960 | 0.827538 | 1.480026e-54 | -8.615850e-47 |
| Msa0272260 | Msa0932960 | 0.802241 | 6.159164e-49 | -8.615850e-47 |
| Msa0520870 | Msa0932960 | 0.818591 | 1.809935e-52 | -8.615850e-47 |
| Msa0531960 | Msa0932960 | 0.812004 | 5.271523e-51 | -8.615850e-47 |
| Msa0534100 | Msa0932960 | 0.822328 | 2.512736e-53 | -8.615850e-47 |
| Msa0550590 | Msa0932960 | 0.810465 | 1.137031e-50 | -8.615850e-47 |
| Msa0563740 | Msa0932960 | 0.829607 | 4.682415e-55 | -8.615850e-47 |
| Msa0571620 | Msa0932960 | 0.806626 | 7.508040e-50 | -8.615850e-47 |
| Msa0590200 | Msa0932960 | 0.830875 | 2.295766e-55 | -8.615850e-47 |
| Msa0868890 | Msa0932960 | 0.859561 | 3.799888e-63 | -8.615850e-47 |
| Msa0888790 | Msa0932960 | 0.817090 | 3.949523e-52 | -8.615850e-47 |
| Msa0909760 | Msa0932960 | 0.826753 | 2.282314e-54 | -8.615850e-47 |
| Msa0931590 | Msa0932960 | 0.821847 | 3.247534e-53 | -8.615850e-47 |
| Msa0932960 | Msa0966480 | 0.806174 | 9.350703e-50 | -8.615850e-47 |
| Msa0932960 | Msa0970770 | 0.907217 | 6.434051e-81 | -8.615850e-47 |
| Msa0932960 | Msa1033920 | 0.813601 | 2.357257e-51 | -8.615850e-47 |
| Msa0932960 | Msa1035220 | 0.811053 | 8.483982e-51 | -8.615850e-47 |
| Msa0932960 | Msa1037540 | 0.806414 | 8.322718e-50 | -8.615850e-47 |
| Msa0932960 | Msa1042880 | 0.814522 | 1.476330e-51 | -8.615850e-47 |
| Msa0932960 | Msa1078970 | 0.800297 | 1.540061e-48 | -8.615850e-47 |
| Msa0932960 | Msa1081390 | 0.808020 | 3.802655e-50 | -8.615850e-47 |
| Msa0932960 | Msa1084530 | 0.834601 | 2.727697e-56 | -8.615850e-47 |
| Msa0932960 | Msa1116190 | 0.802975 | 4.345683e-49 | -8.615850e-47 |
| Msa0932960 | Msa1116220 | 0.805545 | 1.267913e-49 | -8.615850e-47 |
| Msa0932960 | Msa1116660 | 0.827771 | 1.301740e-54 | -8.615850e-47 |
| Msa0932960 | Msa1116740 | 0.805568 | 1.253907e-49 | -8.615850e-47 |
| Msa0932960 | Msa1125820 | 0.831403 | 1.702440e-55 | -8.615850e-47 |
| Msa0932960 | Msa1125990 | 0.827589 | 1.439392e-54 | -8.615850e-47 |
| Msa0932960 | Msa1127280 | 0.804849 | 1.772797e-49 | -8.615850e-47 |
| Msa0932960 | Msa1132530 | 0.813780 | 2.152269e-51 | -8.615850e-47 |
| Msa0932960 | Msa1139050 | 0.820205 | 7.758774e-53 | -8.615850e-47 |
| Msa0932960 | Msa1162880 | 0.824253 | 8.919833e-54 | -8.615850e-47 |
| Msa0932960 | Msa1165480 | 0.802907 | 4.489942e-49 | -8.615850e-47 |
| Msa0932960 | Msa1171290 | 0.820050 | 8.415588e-53 | -8.615850e-47 |
| Msa0932960 | Msa1190390 | 0.820888 | 5.405982e-53 | -8.615850e-47 |
| Msa0932960 | Msa1213830 | 0.804231 | 2.385541e-49 | -8.615850e-47 |
| Msa0932960 | Msa1214350 | 0.837208 | 5.953906e-57 | -8.615850e-47 |
| Msa0932960 | Msa1215980 | 0.810742 | 9.907611e-51 | -8.615850e-47 |
| Msa0932960 | Msa1218820 | 0.809595 | 1.751113e-50 | -8.615850e-47 |
| Msa0932960 | Msa1226520 | 0.801812 | 7.545451e-49 | -8.615850e-47 |
| Msa0932960 | Msa1244240 | 0.825680 | 4.106814e-54 | -8.615850e-47 |
| Msa0932960 | Msa1254540 | 0.824624 | 7.295660e-54 | -8.615850e-47 |
| Msa0932960 | Msa1261050 | 0.836961 | 6.885936e-57 | -8.615850e-47 |
| Msa0932960 | Msa1263780 | 0.816999 | 4.140404e-52 | -8.615850e-47 |
| Msa0932960 | Msa1300460 | 0.817317 | 3.510761e-52 | -8.615850e-47 |
| Msa0932960 | Msa1301700 | 0.810355 | 1.201090e-50 | -8.615850e-47 |
| Msa0932960 | Msa1305780 | 0.826754 | 2.281133e-54 | -8.615850e-47 |
| Msa0932960 | Msa1306790 | 0.805211 | 1.489294e-49 | -8.615850e-47 |
| Msa0932960 | Msa1332950 | 0.801980 | 6.970100e-49 | -8.615850e-47 |
| Msa0932960 | Msa1338210 | 0.806563 | 7.742737e-50 | -8.615850e-47 |
| Msa0932960 | Msa1339170 | 0.820234 | 7.637126e-53 | -8.615850e-47 |
| Msa0932960 | Msa1368750 | 0.811495 | 6.805614e-51 | -8.615850e-47 |
| Msa0932960 | Msa1374790 | 0.811589 | 6.490340e-51 | -8.615850e-47 |
| Msa0932960 | Msa1387440 | 0.807327 | 5.337353e-50 | -8.615850e-47 |
| Msa0932960 | Msa1426110 | 0.804092 | 2.549521e-49 | -8.615850e-47 |
| Msa0932960 | Msa1442260 | 0.821817 | 3.299766e-53 | -8.615850e-47 |
| Msa0932960 | Msa1445120 | 0.803456 | 3.455441e-49 | -8.615850e-47 |
| Msa0932960 | Msa1447170 | 0.810702 | 1.010870e-50 | -8.615850e-47 |
| Msa0932960 | Msa1450190 | 0.801579 | 8.423736e-49 | -8.615850e-47 |
| Msa0932960 | Msa1451820 | 0.813665 | 2.281918e-51 | -8.615850e-47 |
| Msa0932960 | Msa1465360 | 0.805259 | 1.455538e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932960 | MtrunA17_Chr6g0449701 | 97.222 | 504 | 14 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1013 |
| Msa0932960 | MtrunA17_Chr6g0450051 | 61.562 | 333 | 10 | 4 | 96 | 370 | 22 | 294 | 1.44e-125 | 368 |
| Msa0932960 | MtrunA17_Chr7g0253861 | 29.167 | 240 | 132 | 8 | 106 | 341 | 96 | 301 | 4.02e-19 | 88.6 |
| Msa0932960 | MtrunA17_Chr8g0383711 | 23.675 | 283 | 174 | 10 | 104 | 385 | 56 | 297 | 9.83e-13 | 68.9 |
| Msa0932960 | MtrunA17_Chr3g0116561 | 23.656 | 279 | 171 | 7 | 110 | 385 | 269 | 508 | 4.07e-12 | 68.6 |
| Msa0932960 | MtrunA17_Chr4g0058091 | 23.214 | 280 | 171 | 11 | 110 | 385 | 274 | 513 | 2.92e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932960 | AT3G27640.2 | 48.649 | 518 | 248 | 7 | 1 | 503 | 1 | 515 | 2.12e-155 | 452 |
| Msa0932960 | AT3G27640.1 | 48.649 | 518 | 248 | 7 | 1 | 503 | 20 | 534 | 3.02e-155 | 453 |
| Msa0932960 | AT2G43770.1 | 27.083 | 240 | 137 | 7 | 106 | 341 | 94 | 299 | 2.17e-19 | 89.7 |
Find 138 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAGGAGCCATTGAGATTT+TGG | 0.146292 | 6_3:+1397524 | None:intergenic |
| ATTCCAGTGTGCTGAAGTTT+TGG | 0.224406 | 6_3:-1395314 | Msa0932960:intron |
| AGCTAAATACATTGTAAATC+TGG | 0.231064 | 6_3:-1393551 | Msa0932960:three_prime_UTR |
| GATTTCTTTGACTATGCTAT+TGG | 0.252464 | 6_3:-1393725 | Msa0932960:three_prime_UTR |
| AGTCCCGAATAGTTCTCTTT+AGG | 0.258046 | 6_3:+1393855 | None:intergenic |
| CGCGAGCTCAATTCCTTTCA+AGG | 0.268282 | 6_3:-1397468 | Msa0932960:intron |
| ACCCTTCTTCGGATGGAAAA+TGG | 0.269667 | 6_3:+1394139 | None:intergenic |
| AACTGCGTTTATTCCATATA+TGG | 0.270324 | 6_3:+1394182 | None:intergenic |
| ATTGAAGAAGAAAAGGGATT+AGG | 0.277731 | 6_3:+1397563 | None:intergenic |
| CCATTCCAACTAACCTTTCC+TGG | 0.292255 | 6_3:+1395246 | None:intergenic |
| ACACAGATCCTCACTGCTTC+TGG | 0.294885 | 6_3:-1396443 | Msa0932960:CDS |
| TTGAAGAAGAAAAGGGATTA+GGG | 0.300517 | 6_3:+1397564 | None:intergenic |
| GTCCCGAATAGTTCTCTTTA+GGG | 0.300972 | 6_3:+1393856 | None:intergenic |
| CCATTCACACAGTTCAATAA+TGG | 0.302103 | 6_3:+1393335 | None:intergenic |
| ATAGTGTTACATCTGTTCTT+TGG | 0.306533 | 6_3:-1395470 | Msa0932960:CDS |
| CCACTGCTGGGGCAGTAAAT+AGG | 0.317952 | 6_3:-1395425 | Msa0932960:intron |
| AAGTGTCTTGGAGTGTTAAC+AGG | 0.318551 | 6_3:-1396008 | Msa0932960:CDS |
| ATTGGAGTGGCTGACTTCAC+TGG | 0.321245 | 6_3:+1394013 | None:intergenic |
| CAACTAACCTTTCCTGGTTC+AGG | 0.327191 | 6_3:+1395252 | None:intergenic |
| TTCTCCACGTCTATTAGAAT+TGG | 0.337090 | 6_3:+1395773 | None:intergenic |
| TGAACCCATCCATCGTAATT+AGG | 0.361799 | 6_3:+1397328 | None:intergenic |
| ATTTCTTTGACTATGCTATT+GGG | 0.365900 | 6_3:-1393724 | Msa0932960:intron |
| TTCCATCCGAAGAAGGGTTA+TGG | 0.368408 | 6_3:-1394134 | Msa0932960:CDS |
| TGGGTCATGTGGTTCTTCAT+TGG | 0.373799 | 6_3:+1394033 | None:intergenic |
| ATGAAAGCATACTAATGCTT+TGG | 0.388360 | 6_3:-1393222 | Msa0932960:three_prime_UTR |
| TAATACACTTCAACTTGAAA+AGG | 0.389461 | 6_3:-1394783 | Msa0932960:CDS |
| AAGAACAGATGTAACACTAT+TGG | 0.392621 | 6_3:+1395473 | None:intergenic |
| GAAATCTTACCAGGATTAGT+TGG | 0.396610 | 6_3:+1395951 | None:intergenic |
| ATTCAAGGTGCCTCAGTGTC+TGG | 0.400795 | 6_3:-1397050 | Msa0932960:CDS |
| ATTTGGCTAAGTAGCGTTGC+CGG | 0.401183 | 6_3:-1393422 | Msa0932960:three_prime_UTR |
| ATTAGTTGGATGAGAAGAAA+TGG | 0.403845 | 6_3:+1395965 | None:intergenic |
| GCAACAGTCCACTGTCATCT+TGG | 0.404685 | 6_3:+1394935 | None:intergenic |
| GAATCGAATTGAAGAAGAAA+AGG | 0.406591 | 6_3:+1397556 | None:intergenic |
| CTTCCCTAAAGAGAACTATT+CGG | 0.408098 | 6_3:-1393859 | Msa0932960:CDS |
| TAATGACTCTTCAAAATAGT+TGG | 0.408960 | 6_3:+1394441 | None:intergenic |
| CAACTTACCTTGCCCCTCCT+TGG | 0.420211 | 6_3:+1395570 | None:intergenic |
| TTCCCTAAAGAGAACTATTC+GGG | 0.426325 | 6_3:-1393858 | Msa0932960:CDS |
| TTTGCACTCTGTTCTAGGTA+TGG | 0.429468 | 6_3:+1394111 | None:intergenic |
| AATCGAATTGAAGAAGAAAA+GGG | 0.430136 | 6_3:+1397557 | None:intergenic |
| AATACACTTCAACTTGAAAA+GGG | 0.432531 | 6_3:-1394782 | Msa0932960:CDS |
| AGCATCTTCTTGAATCCTTT+AGG | 0.436476 | 6_3:-1393825 | Msa0932960:exon |
| CTCATTTACAGGTTAAGGTA+TGG | 0.436651 | 6_3:-1396046 | Msa0932960:intron |
| TGTCCTAAGTCAAGTGACTA+TGG | 0.436683 | 6_3:-1394064 | Msa0932960:CDS |
| CAAGTTTCCATAGCCACTGC+TGG | 0.445098 | 6_3:-1395438 | Msa0932960:CDS |
| TTAGTCTCTGGTTCAAGAGA+TGG | 0.446331 | 6_3:-1395828 | Msa0932960:CDS |
| AAAGACCTAATTACGATGGA+TGG | 0.451394 | 6_3:-1397333 | Msa0932960:CDS |
| GATGCATCTAACATCGTTTG+TGG | 0.452491 | 6_3:-1394605 | Msa0932960:CDS |
| GTAATGCAAAAGCATATGTT+TGG | 0.455916 | 6_3:-1394577 | Msa0932960:CDS |
| ACTCAAACCACCTCTATCAT+AGG | 0.459563 | 6_3:+1393754 | None:intergenic |
| TGATACTCGTCGAAAATTCA+AGG | 0.459765 | 6_3:-1397065 | Msa0932960:CDS |
| TACATCTGTTCTTTGGCTCA+AGG | 0.459933 | 6_3:-1395463 | Msa0932960:CDS |
| TGCAAAAGCATATGTTTGGC+AGG | 0.463133 | 6_3:-1394573 | Msa0932960:intron |
| AATTACGATGGATGGGTTCA+CGG | 0.464238 | 6_3:-1397325 | Msa0932960:CDS |
| CTGCTTCCTGCATGGATAGC+CGG | 0.464384 | 6_3:-1394909 | Msa0932960:intron |
| TAGAGGTGGTTTGAGTGGCT+TGG | 0.467350 | 6_3:-1393747 | Msa0932960:three_prime_UTR |
| AAACATCAGTTATTCACATA+TGG | 0.467895 | 6_3:+1393269 | None:intergenic |
| TATTCTTGCTTTGTCTAATG+AGG | 0.469123 | 6_3:-1397107 | Msa0932960:CDS |
| TCTTCTCATCCAACTAATCC+TGG | 0.470498 | 6_3:-1395960 | Msa0932960:intron |
| GCTAAATACATTGTAAATCT+GGG | 0.470866 | 6_3:-1393550 | Msa0932960:three_prime_UTR |
| CAAACGATGTTAGATGCATC+GGG | 0.471565 | 6_3:+1394608 | None:intergenic |
| CACTGCTTCTGGAGATCAAA+CGG | 0.476414 | 6_3:-1396432 | Msa0932960:intron |
| GTTCAAGAAAAGAAGTGTCT+TGG | 0.477207 | 6_3:-1396020 | Msa0932960:CDS |
| TCTTGCTCTTTCGTTTGCTA+AGG | 0.477489 | 6_3:-1397248 | Msa0932960:intron |
| GTTGCTTTCTGCTTCCTGCA+TGG | 0.478726 | 6_3:-1394917 | Msa0932960:CDS |
| CAACAGTCCACTGTCATCTT+GGG | 0.479623 | 6_3:+1394936 | None:intergenic |
| GTATGGCCATAACCCTTCTT+CGG | 0.481816 | 6_3:+1394128 | None:intergenic |
| GGGGCTTTAAGATACTTTGA+AGG | 0.483334 | 6_3:-1394761 | Msa0932960:CDS |
| AAAGTATGATTAGGCATAAG+AGG | 0.488950 | 6_3:-1393312 | Msa0932960:three_prime_UTR |
| TGAAATGTAAAGTGCATACA+AGG | 0.490499 | 6_3:-1393602 | Msa0932960:three_prime_UTR |
| GGGCTCTTCAAAGCAGACTC+TGG | 0.491351 | 6_3:+1393905 | None:intergenic |
| TGAAGTTGTGAGGTTGAAGA+AGG | 0.491472 | 6_3:+1397491 | None:intergenic |
| GATCAAATTCTGATGAAAGC+TGG | 0.491554 | 6_3:+1393951 | None:intergenic |
| CCATTATTGAACTGTGTGAA+TGG | 0.492994 | 6_3:-1393335 | Msa0932960:three_prime_UTR |
| TACTGCCCCAGCAGTGGCTA+TGG | 0.494116 | 6_3:+1395431 | None:intergenic |
| AAAATAGTTGGTTCCACTTG+AGG | 0.505140 | 6_3:+1394453 | None:intergenic |
| TGTAAAGTGCATACAAGGAT+TGG | 0.505406 | 6_3:-1393597 | Msa0932960:three_prime_UTR |
| GGTTGGTATAATCTGCCTAA+AGG | 0.507208 | 6_3:+1393810 | None:intergenic |
| GTTCACGGATTCTTCGATGT+TGG | 0.509416 | 6_3:-1397310 | Msa0932960:CDS |
| GGCCATAACCCTTCTTCGGA+TGG | 0.512458 | 6_3:+1394132 | None:intergenic |
| CTTGCTTTGTCTAATGAGGA+GGG | 0.518227 | 6_3:-1397103 | Msa0932960:CDS |
| ACAAACGATGTTAGATGCAT+CGG | 0.518389 | 6_3:+1394607 | None:intergenic |
| TCAAGGACTACGACCAAGGA+GGG | 0.523704 | 6_3:-1395583 | Msa0932960:CDS |
| TTGGAGTGGCTGACTTCACT+GGG | 0.525301 | 6_3:+1394014 | None:intergenic |
| CTTCTGCTTGCTAGAGACAA+GGG | 0.526958 | 6_3:-1393516 | Msa0932960:three_prime_UTR |
| TCATTTACAGGTTAAGGTAT+GGG | 0.528918 | 6_3:-1396045 | Msa0932960:intron |
| AGGAAGTTACTGCAGTTGAC+TGG | 0.531215 | 6_3:-1394416 | Msa0932960:intron |
| AGGATACCGGCTATCCATGC+AGG | 0.534164 | 6_3:+1394903 | None:intergenic |
| GCTTCTGCTTGCTAGAGACA+AGG | 0.534198 | 6_3:-1393517 | Msa0932960:three_prime_UTR |
| AGACCATAGTCACTTGACTT+AGG | 0.534526 | 6_3:+1394061 | None:intergenic |
| ATGATTAGGCATAAGAGGCT+TGG | 0.537629 | 6_3:-1393307 | Msa0932960:three_prime_UTR |
| AAGTTTCCATAGCCACTGCT+GGG | 0.538834 | 6_3:-1395437 | Msa0932960:CDS |
| TCTTGCTTTGTCTAATGAGG+AGG | 0.540053 | 6_3:-1397104 | Msa0932960:CDS |
| TATGATAGAGGTGGTTTGAG+TGG | 0.540450 | 6_3:-1393752 | Msa0932960:three_prime_UTR |
| AGTTCAACGGATGTTGTCAA+TGG | 0.542543 | 6_3:-1395621 | Msa0932960:CDS |
| CAGTGTCTGGAAAGAAATGC+AGG | 0.543841 | 6_3:-1397037 | Msa0932960:intron |
| GGAGCACATATTCTGTATCA+AGG | 0.544194 | 6_3:-1395600 | Msa0932960:CDS |
| CTAATATTCCATTGTCAGAC+CGG | 0.544954 | 6_3:+1394318 | None:intergenic |
| AGGAAGCGAGGATTTGTGAA+TGG | 0.548773 | 6_3:-1396643 | Msa0932960:CDS |
| TGTTTGCTTCTCTAGTTCAA+CGG | 0.549906 | 6_3:-1395634 | Msa0932960:intron |
| TGTGAATGGAAAGTATGATT+AGG | 0.553462 | 6_3:-1393321 | Msa0932960:three_prime_UTR |
| GACGTGGAGAAGTTAGCATA+TGG | 0.554547 | 6_3:-1395761 | Msa0932960:intron |
| CTGATGAAAGCTGGTTCTTG+TGG | 0.558388 | 6_3:+1393960 | None:intergenic |
| TGCAGGTGCCGGTCTGACAA+TGG | 0.566626 | 6_3:-1394326 | Msa0932960:intron |
| AGATAGTGATCCTATGATAG+AGG | 0.567130 | 6_3:-1393764 | Msa0932960:three_prime_UTR |
| AAGACCTAATTACGATGGAT+GGG | 0.570767 | 6_3:-1397332 | Msa0932960:CDS |
| GCTGACTTCACTGGGTCATG+TGG | 0.579794 | 6_3:+1394022 | None:intergenic |
| TACACTTCAACTTGAAAAGG+GGG | 0.579993 | 6_3:-1394780 | Msa0932960:CDS |
| TCCTTTCAGCAAAGATTACA+CGG | 0.580848 | 6_3:-1394973 | Msa0932960:intron |
| CGAATAGTTCTCTTTAGGGA+AGG | 0.581795 | 6_3:+1393860 | None:intergenic |
| AGCATGTCCTGAACCAGGAA+AGG | 0.585501 | 6_3:-1395259 | Msa0932960:intron |
| GTTCTCTTTAGGGAAGGCGG+TGG | 0.586355 | 6_3:+1393866 | None:intergenic |
| TTTAGGTGGTGTGATTGGAG+TGG | 0.589905 | 6_3:+1394000 | None:intergenic |
| TTCTGCTTGCTAGAGACAAG+GGG | 0.600251 | 6_3:-1393515 | Msa0932960:three_prime_UTR |
| TCAGGTTGACAAGCCTCAAG+TGG | 0.600772 | 6_3:-1394466 | Msa0932960:intron |
| ATACACTTCAACTTGAAAAG+GGG | 0.605256 | 6_3:-1394781 | Msa0932960:CDS |
| ACACAAGCATGTCCTGAACC+AGG | 0.605317 | 6_3:-1395264 | Msa0932960:CDS |
| TGTATCAAGGACTACGACCA+AGG | 0.613332 | 6_3:-1395587 | Msa0932960:CDS |
| GCTTTAAGATACTTTGAAGG+AGG | 0.615669 | 6_3:-1394758 | Msa0932960:CDS |
| CCTATTTACTGCCCCAGCAG+TGG | 0.615720 | 6_3:+1395425 | None:intergenic |
| TTAGCAAACGAAAGAGCAAG+AGG | 0.621406 | 6_3:+1397250 | None:intergenic |
| AGTGTCTTGGAGTGTTAACA+GGG | 0.627221 | 6_3:-1396007 | Msa0932960:CDS |
| GTGGATTCAATACAGACGAA+GGG | 0.630002 | 6_3:+1393885 | None:intergenic |
| ACTACGACCAAGGAGGGGCA+AGG | 0.633313 | 6_3:-1395577 | Msa0932960:intron |
| ATAGTTCTCTTTAGGGAAGG+CGG | 0.633574 | 6_3:+1393863 | None:intergenic |
| AACTCCAATTCTAATAGACG+TGG | 0.646011 | 6_3:-1395777 | Msa0932960:CDS |
| TGAGCTCGCGTGAAGTTGTG+AGG | 0.654520 | 6_3:+1397481 | None:intergenic |
| GGTGGATTCAATACAGACGA+AGG | 0.656152 | 6_3:+1393884 | None:intergenic |
| TAGTGATCCTATGATAGAGG+TGG | 0.661110 | 6_3:-1393761 | Msa0932960:three_prime_UTR |
| TCTTGATATCAGAGGAAGCG+AGG | 0.662534 | 6_3:-1396655 | Msa0932960:intron |
| GCTGTAGCTACTCAGCATAA+CGG | 0.663584 | 6_3:-1397286 | Msa0932960:CDS |
| CAAGGACTACGACCAAGGAG+GGG | 0.667467 | 6_3:-1395582 | Msa0932960:CDS |
| GGAGTGTTAACAGGGCACAC+AGG | 0.670888 | 6_3:-1395999 | Msa0932960:CDS |
| ATCAAGGACTACGACCAAGG+AGG | 0.673071 | 6_3:-1395584 | Msa0932960:CDS |
| AGTTTCCATAGCCACTGCTG+GGG | 0.674317 | 6_3:-1395436 | Msa0932960:CDS |
| GCATTTCTTTCCAGACACTG+AGG | 0.684431 | 6_3:+1397040 | None:intergenic |
| AGCTTGTCCCAAGATGACAG+TGG | 0.704030 | 6_3:-1394943 | Msa0932960:CDS |
| TTTGATCTCCAGAAGCAGTG+AGG | 0.721465 | 6_3:+1396435 | None:intergenic |
| AAACGATGTTAGATGCATCG+GGG | 0.767496 | 6_3:+1394609 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGATTTTACTATTTAAA+TGG | - | chr6_3:1395434-1395453 | Msa0932960:CDS | 10.0% |
| !! | ATTTACAAAAAATACTATTT+AGG | + | chr6_3:1395897-1395916 | None:intergenic | 10.0% |
| !!! | TATTGAATCATTTTTTATTA+AGG | - | chr6_3:1396042-1396061 | Msa0932960:intron | 10.0% |
| !!! | TTTATTTTGTCATCTTAAAT+TGG | - | chr6_3:1394285-1394304 | Msa0932960:intron | 15.0% |
| !!! | TTTTATATTGAATGTTCTTA+TGG | - | chr6_3:1394703-1394722 | Msa0932960:intron | 15.0% |
| !!! | ACTTCAAATTATATTTTGAA+GGG | + | chr6_3:1395391-1395410 | None:intergenic | 15.0% |
| !!! | AACTTCAAATTATATTTTGA+AGG | + | chr6_3:1395392-1395411 | None:intergenic | 15.0% |
| !!! | AACAATACTTTTTAAATTTC+TGG | + | chr6_3:1395490-1395509 | None:intergenic | 15.0% |
| !!! | TTCGATTTTTCTAACATTTT+AGG | - | chr6_3:1393384-1393403 | Msa0932960:intron | 20.0% |
| !!! | ATTTTCTGCATAAAAACAAA+AGG | + | chr6_3:1393578-1393597 | None:intergenic | 20.0% |
| !! | TTTATGCAGAAAATATTATG+TGG | - | chr6_3:1393584-1393603 | Msa0932960:three_prime_UTR | 20.0% |
| !! | TTATGCAGAAAATATTATGT+GGG | - | chr6_3:1393585-1393604 | Msa0932960:three_prime_UTR | 20.0% |
| !!! | ATTTTGAGTTTTGATCAAAT+TGG | - | chr6_3:1393783-1393802 | Msa0932960:three_prime_UTR | 20.0% |
| !! | ATCAAAATATGTCATATTCT+CGG | + | chr6_3:1393867-1393886 | None:intergenic | 20.0% |
| !! | TTCAAATTATAAACAGTGTT+AGG | + | chr6_3:1393950-1393969 | None:intergenic | 20.0% |
| !! | CATATAATTGCAAAAATTGA+AGG | + | chr6_3:1394203-1394222 | None:intergenic | 20.0% |
| !! | TGTTCATAAAATCTACAAAT+AGG | - | chr6_3:1394221-1394240 | Msa0932960:intron | 20.0% |
| !!! | ACTTGTTAAATTTTGAATCA+AGG | - | chr6_3:1394464-1394483 | Msa0932960:CDS | 20.0% |
| !!! | TTCATTAAAAACTTGTTAAC+AGG | + | chr6_3:1395089-1395108 | None:intergenic | 20.0% |
| !!! | ATATACTTTAAGAGAACATT+CGG | + | chr6_3:1395112-1395131 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTAAGCTTTTAG+CGG | - | chr6_3:1395407-1395426 | Msa0932960:intron | 20.0% |
| !! | AATCATAGTTCAATTTATTC+AGG | + | chr6_3:1395623-1395642 | None:intergenic | 20.0% |
| !! | TGATTAATATGTTTACTAAG+AGG | - | chr6_3:1395638-1395657 | Msa0932960:intron | 20.0% |
| !! | GATTAATATGTTTACTAAGA+GGG | - | chr6_3:1395639-1395658 | Msa0932960:intron | 20.0% |
| !! | TACAAAAAATACTATTTAGG+AGG | + | chr6_3:1395894-1395913 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTAAATCAAACCA+TGG | - | chr6_3:1395904-1395923 | Msa0932960:intron | 20.0% |
| !!! | TTTTTATTAAGGTGAGAATT+TGG | - | chr6_3:1396053-1396072 | Msa0932960:intron | 20.0% |
| !!! | TAACTTAACTTTTACAAATC+AGG | - | chr6_3:1396290-1396309 | Msa0932960:intron | 20.0% |
| !! | TATTTGTAATTGTAAATCTG+TGG | - | chr6_3:1397110-1397129 | Msa0932960:CDS | 20.0% |
| !!! | ATGTTTTGTTGTAAACAATT+TGG | - | chr6_3:1397335-1397354 | Msa0932960:CDS | 20.0% |
| ! | AATCGAATTGAAGAAGAAAA+GGG | + | chr6_3:1393220-1393239 | None:intergenic | 25.0% |
| !!! | TCACCATTGTTTTTTGATTT+TGG | - | chr6_3:1393608-1393627 | Msa0932960:three_prime_UTR | 25.0% |
| !!! | CACCATTGTTTTTTGATTTT+GGG | - | chr6_3:1393609-1393628 | Msa0932960:three_prime_UTR | 25.0% |
| ! | ATCCCAAAATCAAAAAACAA+TGG | + | chr6_3:1393614-1393633 | None:intergenic | 25.0% |
| ! | TTCAATGTAATTACATGTGT+CGG | - | chr6_3:1393982-1394001 | Msa0932960:CDS | 25.0% |
| !! | TTTTGATGTCAATTGGATTA+AGG | - | chr6_3:1394174-1394193 | Msa0932960:CDS | 25.0% |
| !! | ATTGGTTTACATTTATTTGC+AGG | - | chr6_3:1394303-1394322 | Msa0932960:CDS | 25.0% |
| !!! | AATCTGTATATTGTTTTAGC+AGG | + | chr6_3:1394400-1394419 | None:intergenic | 25.0% |
| ! | ACAAGTTCTGCAATTTAAAA+GGG | + | chr6_3:1394562-1394581 | None:intergenic | 25.0% |
| ! | AACAAGTTCTGCAATTTAAA+AGG | + | chr6_3:1394563-1394582 | None:intergenic | 25.0% |
| ! | TCAATATAAAACCAGCTTAA+AGG | + | chr6_3:1394694-1394713 | None:intergenic | 25.0% |
| !!! | TCTATGTTTTTACAATGTAC+TGG | - | chr6_3:1394860-1394879 | Msa0932960:intron | 25.0% |
| ! | TAATACACTTCAACTTGAAA+AGG | - | chr6_3:1395991-1396010 | Msa0932960:CDS | 25.0% |
| ! | AATACACTTCAACTTGAAAA+GGG | - | chr6_3:1395992-1396011 | Msa0932960:CDS | 25.0% |
| !! | AACTTGATGCAAGAAATTTT+GGG | + | chr6_3:1396086-1396105 | None:intergenic | 25.0% |
| !! | AAACTTGATGCAAGAAATTT+TGG | + | chr6_3:1396087-1396106 | None:intergenic | 25.0% |
| ! | TAATGACTCTTCAAAATAGT+TGG | + | chr6_3:1396336-1396355 | None:intergenic | 25.0% |
| !!! | TCTAACTTAATTTGTTTTGC+AGG | - | chr6_3:1396431-1396450 | Msa0932960:intron | 25.0% |
| ! | GATCTAAAAATGCAAAATTG+GGG | + | chr6_3:1396573-1396592 | None:intergenic | 25.0% |
| ! | GGATCTAAAAATGCAAAATT+GGG | + | chr6_3:1396574-1396593 | None:intergenic | 25.0% |
| ! | TGGATCTAAAAATGCAAAAT+TGG | + | chr6_3:1396575-1396594 | None:intergenic | 25.0% |
| !!! | TGCATTTTTAGATCCATATA+TGG | - | chr6_3:1396579-1396598 | Msa0932960:intron | 25.0% |
| !!! | AGCTACTTTTCAACAAAATT+GGG | + | chr6_3:1396988-1397007 | None:intergenic | 25.0% |
| ! | ATTTCTTTGACTATGCTATT+GGG | - | chr6_3:1397050-1397069 | Msa0932960:CDS | 25.0% |
| !! | AACTGAACATTTAAAATCTC+TGG | + | chr6_3:1397090-1397109 | None:intergenic | 25.0% |
| ! | TAATTGTAAATCTGTGGTAA+GGG | - | chr6_3:1397116-1397135 | Msa0932960:CDS | 25.0% |
| !! | TTGTTTATTGTCATTTCTGT+AGG | - | chr6_3:1397144-1397163 | Msa0932960:intron | 25.0% |
| ! | AGCTAAATACATTGTAAATC+TGG | - | chr6_3:1397223-1397242 | Msa0932960:intron | 25.0% |
| ! | GCTAAATACATTGTAAATCT+GGG | - | chr6_3:1397224-1397243 | Msa0932960:intron | 25.0% |
| ! | AAACATCAGTTATTCACATA+TGG | + | chr6_3:1397508-1397527 | None:intergenic | 25.0% |
| TTGAAGAAGAAAAGGGATTA+GGG | + | chr6_3:1393213-1393232 | None:intergenic | 30.0% | |
| ATTGAAGAAGAAAAGGGATT+AGG | + | chr6_3:1393214-1393233 | None:intergenic | 30.0% | |
| GAATCGAATTGAAGAAGAAA+AGG | + | chr6_3:1393221-1393240 | None:intergenic | 30.0% | |
| ! | ATTTTCTCCCAAAATCTCAA+TGG | - | chr6_3:1393242-1393261 | Msa0932960:three_prime_UTR | 30.0% |
| !! | GAATTTTAACGAACCTTGAA+AGG | + | chr6_3:1393322-1393341 | None:intergenic | 30.0% |
| TATTCTTGCTTTGTCTAATG+AGG | - | chr6_3:1393667-1393686 | Msa0932960:intron | 30.0% | |
| TATTAGTTAGACTTGAAGCA+TGG | - | chr6_3:1393806-1393825 | Msa0932960:three_prime_UTR | 30.0% | |
| TGTTAGACACTTACATGTAT+CGG | - | chr6_3:1394005-1394024 | Msa0932960:CDS | 30.0% | |
| ! | ATGCAGTTTTTGATGTCAAT+TGG | - | chr6_3:1394167-1394186 | Msa0932960:CDS | 30.0% |
| AAGTTCTGCAATTTAAAAGG+GGG | + | chr6_3:1394560-1394579 | None:intergenic | 30.0% | |
| CAAGTTCTGCAATTTAAAAG+GGG | + | chr6_3:1394561-1394580 | None:intergenic | 30.0% | |
| ! | TCATAGCATTGAGTTAGAAT+TGG | - | chr6_3:1394623-1394642 | Msa0932960:CDS | 30.0% |
| TCATTTACAGGTTAAGGTAT+GGG | - | chr6_3:1394729-1394748 | Msa0932960:intron | 30.0% | |
| ATTAGTTGGATGAGAAGAAA+TGG | + | chr6_3:1394812-1394831 | None:intergenic | 30.0% | |
| ATACACAAAGAAATCTTACC+AGG | + | chr6_3:1394835-1394854 | None:intergenic | 30.0% | |
| GACTAAAATATCTGCAAGTT+TGG | + | chr6_3:1394932-1394951 | None:intergenic | 30.0% | |
| AAGAACAGATGTAACACTAT+TGG | + | chr6_3:1395304-1395323 | None:intergenic | 30.0% | |
| ATAGTGTTACATCTGTTCTT+TGG | - | chr6_3:1395304-1395323 | Msa0932960:CDS | 30.0% | |
| TAGTTTATATACAACGAGTC+TGG | - | chr6_3:1395577-1395596 | Msa0932960:intron | 30.0% | |
| AGTTTATATACAACGAGTCT+GGG | - | chr6_3:1395578-1395597 | Msa0932960:CDS | 30.0% | |
| AATACTATTTAGGAGGATAC+CGG | + | chr6_3:1395887-1395906 | None:intergenic | 30.0% | |
| ATACACTTCAACTTGAAAAG+GGG | - | chr6_3:1395993-1396012 | Msa0932960:CDS | 30.0% | |
| ! | GTAATGCAAAAGCATATGTT+TGG | - | chr6_3:1396197-1396216 | Msa0932960:intron | 30.0% |
| CAATCAACTACTCTATAGTT+TGG | - | chr6_3:1396240-1396259 | Msa0932960:intron | 30.0% | |
| TACTCTATAGTTTGGTACTT+TGG | - | chr6_3:1396248-1396267 | Msa0932960:intron | 30.0% | |
| !! | TATTTTGAAGAGTCATTACG+AGG | - | chr6_3:1396338-1396357 | Msa0932960:intron | 30.0% |
| TGACTGGTAAATTGGAAATT+AGG | - | chr6_3:1396374-1396393 | Msa0932960:intron | 30.0% | |
| GTTAGAATCTCATATCAGAT+CGG | + | chr6_3:1396417-1396436 | None:intergenic | 30.0% | |
| AACTGCGTTTATTCCATATA+TGG | + | chr6_3:1396595-1396614 | None:intergenic | 30.0% | |
| !! | CATTCAGATGTAGTTGTTTT+AGG | + | chr6_3:1396794-1396813 | None:intergenic | 30.0% |
| !!! | TGGAGTTTTTTTAGGAGATA+TGG | + | chr6_3:1396852-1396871 | None:intergenic | 30.0% |
| ! | ACTTTTCAACAAAATTGGGT+TGG | + | chr6_3:1396984-1397003 | None:intergenic | 30.0% |
| !!! | CAGCTACTTTTCAACAAAAT+TGG | + | chr6_3:1396989-1397008 | None:intergenic | 30.0% |
| GATTTCTTTGACTATGCTAT+TGG | - | chr6_3:1397049-1397068 | Msa0932960:CDS | 30.0% | |
| GTAATTGTAAATCTGTGGTA+AGG | - | chr6_3:1397115-1397134 | Msa0932960:CDS | 30.0% | |
| TGAAATGTAAAGTGCATACA+AGG | - | chr6_3:1397172-1397191 | Msa0932960:intron | 30.0% | |
| ! | TGTGAATGGAAAGTATGATT+AGG | - | chr6_3:1397453-1397472 | Msa0932960:intron | 30.0% |
| AAAGTATGATTAGGCATAAG+AGG | - | chr6_3:1397462-1397481 | Msa0932960:intron | 30.0% | |
| !! | GTGAATAACTGATGTTTTTG+TGG | - | chr6_3:1397511-1397530 | Msa0932960:CDS | 30.0% |
| ! | ATGAAAGCATACTAATGCTT+TGG | - | chr6_3:1397552-1397571 | Msa0932960:five_prime_UTR | 30.0% |
| !!! | TGCTTTGGTTTTGATTGTTA+AGG | - | chr6_3:1397567-1397586 | Msa0932960:five_prime_UTR | 30.0% |
| !!! | TTGGTTTTGATTGTTAAGGT+TGG | - | chr6_3:1397571-1397590 | Msa0932960:five_prime_UTR | 30.0% |
| ! | AAGAAGGATTGAGATTTTCG+AGG | + | chr6_3:1393270-1393289 | None:intergenic | 35.0% |
| CGAAAAAGACCTAATTACGA+TGG | - | chr6_3:1393437-1393456 | Msa0932960:three_prime_UTR | 35.0% | |
| AAAGACCTAATTACGATGGA+TGG | - | chr6_3:1393441-1393460 | Msa0932960:three_prime_UTR | 35.0% | |
| AAGACCTAATTACGATGGAT+GGG | - | chr6_3:1393442-1393461 | Msa0932960:three_prime_UTR | 35.0% | |
| TGATACTCGTCGAAAATTCA+AGG | - | chr6_3:1393709-1393728 | Msa0932960:intron | 35.0% | |
| ! | CTTGGAAGGATAAGAAGTAT+TGG | - | chr6_3:1394031-1394050 | Msa0932960:CDS | 35.0% |
| ! | ATTTTGCCTCTTGATATCAG+AGG | - | chr6_3:1394111-1394130 | Msa0932960:CDS | 35.0% |
| CTATGCAGTGTTTCAAAATG+TGG | + | chr6_3:1394493-1394512 | None:intergenic | 35.0% | |
| !!! | CACATTTTGAAACACTGCAT+AGG | - | chr6_3:1394491-1394510 | Msa0932960:intron | 35.0% |
| ATGAGTAGTTTCCTTTAAGC+TGG | - | chr6_3:1394680-1394699 | Msa0932960:intron | 35.0% | |
| TTCTTATGGTGCTCATTTAC+AGG | - | chr6_3:1394717-1394736 | Msa0932960:intron | 35.0% | |
| CTCATTTACAGGTTAAGGTA+TGG | - | chr6_3:1394728-1394747 | Msa0932960:intron | 35.0% | |
| !! | GTTCAAGAAAAGAAGTGTCT+TGG | - | chr6_3:1394754-1394773 | Msa0932960:CDS | 35.0% |
| ! | GAAATCTTACCAGGATTAGT+TGG | + | chr6_3:1394826-1394845 | None:intergenic | 35.0% |
| !!! | CTTGCAGATATTTTAGTCTC+TGG | - | chr6_3:1394934-1394953 | Msa0932960:CDS | 35.0% |
| ! | AGATGGATCTTTTCGTCTTT+GGG | - | chr6_3:1394963-1394982 | Msa0932960:CDS | 35.0% |
| AACTCCAATTCTAATAGACG+TGG | - | chr6_3:1394997-1395016 | Msa0932960:intron | 35.0% | |
| TTCTCCACGTCTATTAGAAT+TGG | + | chr6_3:1395004-1395023 | None:intergenic | 35.0% | |
| ! | TGTTTGCTTCTCTAGTTCAA+CGG | - | chr6_3:1395140-1395159 | Msa0932960:intron | 35.0% |
| ! | GGTTAGAGTTGTTGTTAGAA+GGG | + | chr6_3:1395268-1395287 | None:intergenic | 35.0% |
| ! | AGGTTAGAGTTGTTGTTAGA+AGG | + | chr6_3:1395269-1395288 | None:intergenic | 35.0% |
| GTTTATATACAACGAGTCTG+GGG | - | chr6_3:1395579-1395598 | Msa0932960:CDS | 35.0% | |
| ! | GAGGGTATATGCATTTCTTA+TGG | - | chr6_3:1395657-1395676 | Msa0932960:intron | 35.0% |
| TCCTTTCAGCAAAGATTACA+CGG | - | chr6_3:1395801-1395820 | Msa0932960:CDS | 35.0% | |
| GATGAAAATTCTCGAAACCA+TGG | + | chr6_3:1395924-1395943 | None:intergenic | 35.0% | |
| TACACTTCAACTTGAAAAGG+GGG | - | chr6_3:1395994-1396013 | Msa0932960:CDS | 35.0% | |
| !! | GCTTTAAGATACTTTGAAGG+AGG | - | chr6_3:1396016-1396035 | Msa0932960:CDS | 35.0% |
| ACAAACGATGTTAGATGCAT+CGG | + | chr6_3:1396170-1396189 | None:intergenic | 35.0% | |
| ! | AAAATAGTTGGTTCCACTTG+AGG | + | chr6_3:1396324-1396343 | None:intergenic | 35.0% |
| GGTAAATTGGAAATTAGGCA+TGG | - | chr6_3:1396379-1396398 | Msa0932960:intron | 35.0% | |
| !!! | TTAATTTGTTTTGCAGGTGC+CGG | - | chr6_3:1396437-1396456 | Msa0932960:CDS | 35.0% |
| CTAATATTCCATTGTCAGAC+CGG | + | chr6_3:1396459-1396478 | None:intergenic | 35.0% | |
| !!! | TCAGATGTAGTTGTTTTAGG+TGG | + | chr6_3:1396791-1396810 | None:intergenic | 35.0% |
| GATCAAATTCTGATGAAAGC+TGG | + | chr6_3:1396826-1396845 | None:intergenic | 35.0% | |
| CTTCCCTAAAGAGAACTATT+CGG | - | chr6_3:1396915-1396934 | Msa0932960:intron | 35.0% | |
| TTCCCTAAAGAGAACTATTC+GGG | - | chr6_3:1396916-1396935 | Msa0932960:intron | 35.0% | |
| AGCATCTTCTTGAATCCTTT+AGG | - | chr6_3:1396949-1396968 | Msa0932960:intron | 35.0% | |
| AGATAGTGATCCTATGATAG+AGG | - | chr6_3:1397010-1397029 | Msa0932960:intron | 35.0% | |
| TTTGACTATGCTATTGGGTA+AGG | - | chr6_3:1397055-1397074 | Msa0932960:CDS | 35.0% | |
| TTGACTATGCTATTGGGTAA+GGG | - | chr6_3:1397056-1397075 | Msa0932960:CDS | 35.0% | |
| TGTAAAGTGCATACAAGGAT+TGG | - | chr6_3:1397177-1397196 | Msa0932960:intron | 35.0% | |
| !! | TCAATAATGGACATCAACCA+TGG | + | chr6_3:1397386-1397405 | None:intergenic | 35.0% |
| !! | TCAATAATGGACATCAACCA+TGG | + | chr6_3:1397386-1397405 | None:intergenic | 35.0% |
| CCATTCACACAGTTCAATAA+TGG | + | chr6_3:1397442-1397461 | None:intergenic | 35.0% | |
| CCATTATTGAACTGTGTGAA+TGG | - | chr6_3:1397439-1397458 | Msa0932960:intron | 35.0% | |
| TGAAGTTGTGAGGTTGAAGA+AGG | + | chr6_3:1393286-1393305 | None:intergenic | 40.0% | |
| TGAACCCATCCATCGTAATT+AGG | + | chr6_3:1393449-1393468 | None:intergenic | 40.0% | |
| ! | AATTACGATGGATGGGTTCA+CGG | - | chr6_3:1393449-1393468 | Msa0932960:three_prime_UTR | 40.0% |
| TTAGCAAACGAAAGAGCAAG+AGG | + | chr6_3:1393527-1393546 | None:intergenic | 40.0% | |
| ! | TCTTGCTCTTTCGTTTGCTA+AGG | - | chr6_3:1393526-1393545 | Msa0932960:three_prime_UTR | 40.0% |
| TCTTGCTTTGTCTAATGAGG+AGG | - | chr6_3:1393670-1393689 | Msa0932960:intron | 40.0% | |
| CTTGCTTTGTCTAATGAGGA+GGG | - | chr6_3:1393671-1393690 | Msa0932960:intron | 40.0% | |
| ACTTACATGTATCGGACACT+TGG | - | chr6_3:1394013-1394032 | Msa0932960:CDS | 40.0% | |
| ACAAGTGTCATGTGAGAATC+AGG | + | chr6_3:1394450-1394469 | None:intergenic | 40.0% | |
| !! | ACACTGCATAGGTTGATTGT+TGG | - | chr6_3:1394502-1394521 | Msa0932960:intron | 40.0% |
| ! | TGCAATTTAAAAGGGGGTAC+TGG | + | chr6_3:1394554-1394573 | None:intergenic | 40.0% |
| TGGTGCTCATTTACAGGTTA+AGG | - | chr6_3:1394723-1394742 | Msa0932960:intron | 40.0% | |
| ! | AAGTGTCTTGGAGTGTTAAC+AGG | - | chr6_3:1394766-1394785 | Msa0932960:CDS | 40.0% |
| ! | AGTGTCTTGGAGTGTTAACA+GGG | - | chr6_3:1394767-1394786 | Msa0932960:CDS | 40.0% |
| TCTTCTCATCCAACTAATCC+TGG | - | chr6_3:1394814-1394833 | Msa0932960:intron | 40.0% | |
| ! | TTAGTCTCTGGTTCAAGAGA+TGG | - | chr6_3:1394946-1394965 | Msa0932960:CDS | 40.0% |
| ! | GAGATGGATCTTTTCGTCTT+TGG | - | chr6_3:1394962-1394981 | Msa0932960:CDS | 40.0% |
| AGTTCAACGGATGTTGTCAA+TGG | - | chr6_3:1395153-1395172 | Msa0932960:intron | 40.0% | |
| GGAGCACATATTCTGTATCA+AGG | - | chr6_3:1395174-1395193 | Msa0932960:intron | 40.0% | |
| AACAACAACTCTAACCTGTC+AGG | - | chr6_3:1395272-1395291 | Msa0932960:CDS | 40.0% | |
| ! | TACATCTGTTCTTTGGCTCA+AGG | - | chr6_3:1395311-1395330 | Msa0932960:intron | 40.0% |
| ! | ATTCCAGTGTGCTGAAGTTT+TGG | - | chr6_3:1395460-1395479 | Msa0932960:CDS | 40.0% |
| ! | TTCCAGTGTGCTGAAGTTTT+GGG | - | chr6_3:1395461-1395480 | Msa0932960:CDS | 40.0% |
| TCTGGGGAGTTTACAAATTG+AGG | - | chr6_3:1395595-1395614 | Msa0932960:CDS | 40.0% | |
| ACCGTGTAATCTTTGCTGAA+AGG | + | chr6_3:1395805-1395824 | None:intergenic | 40.0% | |
| !! | GGGGCTTTAAGATACTTTGA+AGG | - | chr6_3:1396013-1396032 | Msa0932960:CDS | 40.0% |
| GGAATTGAACACATGAGACA+GGG | + | chr6_3:1396132-1396151 | None:intergenic | 40.0% | |
| TGGAATTGAACACATGAGAC+AGG | + | chr6_3:1396133-1396152 | None:intergenic | 40.0% | |
| TGTCTCATGTGTTCAATTCC+AGG | - | chr6_3:1396132-1396151 | Msa0932960:intron | 40.0% | |
| AAACGATGTTAGATGCATCG+GGG | + | chr6_3:1396168-1396187 | None:intergenic | 40.0% | |
| CAAACGATGTTAGATGCATC+GGG | + | chr6_3:1396169-1396188 | None:intergenic | 40.0% | |
| GATGCATCTAACATCGTTTG+TGG | - | chr6_3:1396169-1396188 | Msa0932960:intron | 40.0% | |
| ! | TGCAAAAGCATATGTTTGGC+AGG | - | chr6_3:1396201-1396220 | Msa0932960:intron | 40.0% |
| TTGGTACTTTGGTTGCAGTA+AGG | - | chr6_3:1396259-1396278 | Msa0932960:intron | 40.0% | |
| ACTGCAGTTGACTGGTAAAT+TGG | - | chr6_3:1396366-1396385 | Msa0932960:intron | 40.0% | |
| ! | TCCATTTTCCATCCGAAGAA+GGG | - | chr6_3:1396634-1396653 | Msa0932960:CDS | 40.0% |
| ! | TTTGCACTCTGTTCTAGGTA+TGG | + | chr6_3:1396666-1396685 | None:intergenic | 40.0% |
| ! | AGCATTTTGCACTCTGTTCT+AGG | + | chr6_3:1396671-1396690 | None:intergenic | 40.0% |
| TGTCCTAAGTCAAGTGACTA+TGG | - | chr6_3:1396710-1396729 | Msa0932960:intron | 40.0% | |
| AGACCATAGTCACTTGACTT+AGG | + | chr6_3:1396716-1396735 | None:intergenic | 40.0% | |
| !!! | GTTGTTTTAGGTGGTGTGAT+TGG | + | chr6_3:1396782-1396801 | None:intergenic | 40.0% |
| !!! | GCAGACTCTGGAGTTTTTTT+AGG | + | chr6_3:1396860-1396879 | None:intergenic | 40.0% |
| GTGGATTCAATACAGACGAA+GGG | + | chr6_3:1396892-1396911 | None:intergenic | 40.0% | |
| ! | ATAGTTCTCTTTAGGGAAGG+CGG | + | chr6_3:1396914-1396933 | None:intergenic | 40.0% |
| ! | CGAATAGTTCTCTTTAGGGA+AGG | + | chr6_3:1396917-1396936 | None:intergenic | 40.0% |
| GTCCCGAATAGTTCTCTTTA+GGG | + | chr6_3:1396921-1396940 | None:intergenic | 40.0% | |
| AGTCCCGAATAGTTCTCTTT+AGG | + | chr6_3:1396922-1396941 | None:intergenic | 40.0% | |
| ! | GGTTGGTATAATCTGCCTAA+AGG | + | chr6_3:1396967-1396986 | None:intergenic | 40.0% |
| TAGTGATCCTATGATAGAGG+TGG | - | chr6_3:1397013-1397032 | Msa0932960:intron | 40.0% | |
| ACTCAAACCACCTCTATCAT+AGG | + | chr6_3:1397023-1397042 | None:intergenic | 40.0% | |
| TATGATAGAGGTGGTTTGAG+TGG | - | chr6_3:1397022-1397041 | Msa0932960:intron | 40.0% | |
| !! | ATCAACCATGGTTTTTGAGC+CGG | + | chr6_3:1397374-1397393 | None:intergenic | 40.0% |
| !! | TCCATTATTGAAAGCGTTGC+CGG | - | chr6_3:1397395-1397414 | Msa0932960:intron | 40.0% |
| !! | ATCAACCATGGTTTTTGAGC+CGG | + | chr6_3:1397374-1397393 | None:intergenic | 40.0% |
| ATGATTAGGCATAAGAGGCT+TGG | - | chr6_3:1397467-1397486 | Msa0932960:intron | 40.0% | |
| ! | CGAGGAGCCATTGAGATTTT+GGG | + | chr6_3:1393252-1393271 | None:intergenic | 45.0% |
| ! | TCGAGGAGCCATTGAGATTT+TGG | + | chr6_3:1393253-1393272 | None:intergenic | 45.0% |
| GTTCACGGATTCTTCGATGT+TGG | - | chr6_3:1393464-1393483 | Msa0932960:three_prime_UTR | 45.0% | |
| GCTGTAGCTACTCAGCATAA+CGG | - | chr6_3:1393488-1393507 | Msa0932960:three_prime_UTR | 45.0% | |
| GCATTTCTTTCCAGACACTG+AGG | + | chr6_3:1393737-1393756 | None:intergenic | 45.0% | |
| CAGTGTCTGGAAAGAAATGC+AGG | - | chr6_3:1393737-1393756 | Msa0932960:three_prime_UTR | 45.0% | |
| GGATCGACACTTCTGATCAA+AGG | + | chr6_3:1393929-1393948 | None:intergenic | 45.0% | |
| ACATGTATCGGACACTTGGA+AGG | - | chr6_3:1394017-1394036 | Msa0932960:CDS | 45.0% | |
| TCGCTTCCTCTGATATCAAG+AGG | + | chr6_3:1394120-1394139 | None:intergenic | 45.0% | |
| TCTTGATATCAGAGGAAGCG+AGG | - | chr6_3:1394119-1394138 | Msa0932960:CDS | 45.0% | |
| AGGAAGCGAGGATTTGTGAA+TGG | - | chr6_3:1394131-1394150 | Msa0932960:CDS | 45.0% | |
| TTTGATCTCCAGAAGCAGTG+AGG | + | chr6_3:1394342-1394361 | None:intergenic | 45.0% | |
| ! | CACTGCTTCTGGAGATCAAA+CGG | - | chr6_3:1394342-1394361 | Msa0932960:intron | 45.0% |
| !! | AAAAGGGGGTACTGGATGTT+GGG | + | chr6_3:1394546-1394565 | None:intergenic | 45.0% |
| !! | TAAAAGGGGGTACTGGATGT+TGG | + | chr6_3:1394547-1394566 | None:intergenic | 45.0% |
| GACGTGGAGAAGTTAGCATA+TGG | - | chr6_3:1395013-1395032 | Msa0932960:intron | 45.0% | |
| TGTATCAAGGACTACGACCA+AGG | - | chr6_3:1395187-1395206 | Msa0932960:intron | 45.0% | |
| ACTATTGGAAGCAACCTGAC+AGG | + | chr6_3:1395289-1395308 | None:intergenic | 45.0% | |
| AAGTTTCCATAGCCACTGCT+GGG | - | chr6_3:1395337-1395356 | Msa0932960:intron | 45.0% | |
| ATCCCAAAACTTCAGCACAC+TGG | + | chr6_3:1395466-1395485 | None:intergenic | 45.0% | |
| CAACTAACCTTTCCTGGTTC+AGG | + | chr6_3:1395525-1395544 | None:intergenic | 45.0% | |
| CTGAACCAGGAAAGGTTAGT+TGG | - | chr6_3:1395523-1395542 | Msa0932960:intron | 45.0% | |
| CCATTCCAACTAACCTTTCC+TGG | + | chr6_3:1395531-1395550 | None:intergenic | 45.0% | |
| ! | CCAGGAAAGGTTAGTTGGAA+TGG | - | chr6_3:1395528-1395547 | Msa0932960:intron | 45.0% |
| AATGGAACTGAGATGTGCAG+TGG | - | chr6_3:1395546-1395565 | Msa0932960:intron | 45.0% | |
| CAACAGTCCACTGTCATCTT+GGG | + | chr6_3:1395841-1395860 | None:intergenic | 45.0% | |
| CATGAGACAGGGAAAAAGTC+AGG | + | chr6_3:1396121-1396140 | None:intergenic | 45.0% | |
| AGGAAGTTACTGCAGTTGAC+TGG | - | chr6_3:1396358-1396377 | Msa0932960:intron | 45.0% | |
| ! | CTCCATTTTCCATCCGAAGA+AGG | - | chr6_3:1396633-1396652 | Msa0932960:CDS | 45.0% |
| ACCCTTCTTCGGATGGAAAA+TGG | + | chr6_3:1396638-1396657 | None:intergenic | 45.0% | |
| TTCCATCCGAAGAAGGGTTA+TGG | - | chr6_3:1396640-1396659 | Msa0932960:CDS | 45.0% | |
| GTATGGCCATAACCCTTCTT+CGG | + | chr6_3:1396649-1396668 | None:intergenic | 45.0% | |
| TGGGTCATGTGGTTCTTCAT+TGG | + | chr6_3:1396744-1396763 | None:intergenic | 45.0% | |
| TTTAGGTGGTGTGATTGGAG+TGG | + | chr6_3:1396777-1396796 | None:intergenic | 45.0% | |
| ! | CTGATGAAAGCTGGTTCTTG+TGG | + | chr6_3:1396817-1396836 | None:intergenic | 45.0% |
| ! | GGTGGATTCAATACAGACGA+AGG | + | chr6_3:1396893-1396912 | None:intergenic | 45.0% |
| ! | CTTCTGCTTGCTAGAGACAA+GGG | - | chr6_3:1397258-1397277 | Msa0932960:CDS | 45.0% |
| ! | TTCTGCTTGCTAGAGACAAG+GGG | - | chr6_3:1397259-1397278 | Msa0932960:CDS | 45.0% |
| ATTTGGCTAAGTAGCGTTGC+CGG | - | chr6_3:1397352-1397371 | Msa0932960:intron | 45.0% | |
| !!! | ATATATATCAAATTTTTTTA+TGG | - | chr6_3:1394067-1394086 | Msa0932960:CDS | 5.0% |
| CGCGAGCTCAATTCCTTTCA+AGG | - | chr6_3:1393306-1393325 | Msa0932960:three_prime_UTR | 50.0% | |
| ! | ATTCAAGGTGCCTCAGTGTC+TGG | - | chr6_3:1393724-1393743 | Msa0932960:intron | 50.0% |
| CACTGACACGTGATGCTACT+TGG | - | chr6_3:1393830-1393849 | Msa0932960:exon | 50.0% | |
| ACACAGATCCTCACTGCTTC+TGG | - | chr6_3:1394331-1394350 | Msa0932960:intron | 50.0% | |
| ATCAAGGACTACGACCAAGG+AGG | - | chr6_3:1395190-1395209 | Msa0932960:intron | 50.0% | |
| TCAAGGACTACGACCAAGGA+GGG | - | chr6_3:1395191-1395210 | Msa0932960:intron | 50.0% | |
| CAAGTTTCCATAGCCACTGC+TGG | - | chr6_3:1395336-1395355 | Msa0932960:intron | 50.0% | |
| AGTTTCCATAGCCACTGCTG+GGG | - | chr6_3:1395338-1395357 | Msa0932960:intron | 50.0% | |
| TGCTGGGGCAGTAAATAGGT+TGG | - | chr6_3:1395353-1395372 | Msa0932960:intron | 50.0% | |
| ACACAAGCATGTCCTGAACC+AGG | - | chr6_3:1395510-1395529 | Msa0932960:intron | 50.0% | |
| AGCATGTCCTGAACCAGGAA+AGG | - | chr6_3:1395515-1395534 | Msa0932960:intron | 50.0% | |
| AGCTTGTCCCAAGATGACAG+TGG | - | chr6_3:1395831-1395850 | Msa0932960:CDS | 50.0% | |
| GCAACAGTCCACTGTCATCT+TGG | + | chr6_3:1395842-1395861 | None:intergenic | 50.0% | |
| ! | GTTGCTTTCTGCTTCCTGCA+TGG | - | chr6_3:1395857-1395876 | Msa0932960:intron | 50.0% |
| !! | TCAGGTTGACAAGCCTCAAG+TGG | - | chr6_3:1396308-1396327 | Msa0932960:intron | 50.0% |
| ! | TTGGAGTGGCTGACTTCACT+GGG | + | chr6_3:1396763-1396782 | None:intergenic | 50.0% |
| ! | ATTGGAGTGGCTGACTTCAC+TGG | + | chr6_3:1396764-1396783 | None:intergenic | 50.0% |
| TAGAGGTGGTTTGAGTGGCT+TGG | - | chr6_3:1397027-1397046 | Msa0932960:intron | 50.0% | |
| ! | GCTTCTGCTTGCTAGAGACA+AGG | - | chr6_3:1397257-1397276 | Msa0932960:CDS | 50.0% |
| GCCGGCAACGCTTTCAATAA+TGG | + | chr6_3:1397399-1397418 | None:intergenic | 50.0% | |
| TGAGCTCGCGTGAAGTTGTG+AGG | + | chr6_3:1393296-1393315 | None:intergenic | 55.0% | |
| ! | GGAGTGTTAACAGGGCACAC+AGG | - | chr6_3:1394775-1394794 | Msa0932960:CDS | 55.0% |
| CAAGGACTACGACCAAGGAG+GGG | - | chr6_3:1395192-1395211 | Msa0932960:intron | 55.0% | |
| CAACTTACCTTGCCCCTCCT+TGG | + | chr6_3:1395207-1395226 | None:intergenic | 55.0% | |
| CCTATTTACTGCCCCAGCAG+TGG | + | chr6_3:1395352-1395371 | None:intergenic | 55.0% | |
| CCACTGCTGGGGCAGTAAAT+AGG | - | chr6_3:1395349-1395368 | Msa0932960:intron | 55.0% | |
| CTGCTTCCTGCATGGATAGC+CGG | - | chr6_3:1395865-1395884 | Msa0932960:intron | 55.0% | |
| ! | AGGATACCGGCTATCCATGC+AGG | + | chr6_3:1395874-1395893 | None:intergenic | 55.0% |
| GGCCATAACCCTTCTTCGGA+TGG | + | chr6_3:1396645-1396664 | None:intergenic | 55.0% | |
| ! | GCTGACTTCACTGGGTCATG+TGG | + | chr6_3:1396755-1396774 | None:intergenic | 55.0% |
| GGGCTCTTCAAAGCAGACTC+TGG | + | chr6_3:1396872-1396891 | None:intergenic | 55.0% | |
| ! | GTTCTCTTTAGGGAAGGCGG+TGG | + | chr6_3:1396911-1396930 | None:intergenic | 55.0% |
| !! | CGTTGCCGGCTCAAAAACCA+TGG | - | chr6_3:1397366-1397385 | Msa0932960:intron | 55.0% |
| !! | CGTTGCCGGCTCAAAAACCA+TGG | - | chr6_3:1397366-1397385 | Msa0932960:intron | 55.0% |
| ACTACGACCAAGGAGGGGCA+AGG | - | chr6_3:1395197-1395216 | Msa0932960:intron | 60.0% | |
| GGAGGGGCAAGGTAAGTTGC+TGG | - | chr6_3:1395208-1395227 | Msa0932960:intron | 60.0% | |
| GGGGCAAGGTAAGTTGCTGG+TGG | - | chr6_3:1395211-1395230 | Msa0932960:intron | 60.0% | |
| TACTGCCCCAGCAGTGGCTA+TGG | + | chr6_3:1395346-1395365 | None:intergenic | 60.0% | |
| !! | TGCAGGTGCCGGTCTGACAA+TGG | - | chr6_3:1396448-1396467 | Msa0932960:CDS | 60.0% |
| CATCGGGGCTAATCGCAGCC+TGG | + | chr6_3:1396153-1396172 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 1393188 | 1397608 | 1393188 | ID=Msa0932960;Name=Msa0932960 |
| chr6_3 | mRNA | 1393188 | 1397608 | 1393188 | ID=Msa0932960-mRNA-1;Parent=Msa0932960;Name=Msa0932960-mRNA-1;_AED=0.15;_eAED=0.15;_QI=73|1|1|1|0.88|0.83|18|510|504 |
| chr6_3 | exon | 1393188 | 1393364 | 1393188 | ID=Msa0932960-mRNA-1:exon:546;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1393408 | 1393630 | 1393408 | ID=Msa0932960-mRNA-1:exon:545;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1393725 | 1394206 | 1393725 | ID=Msa0932960-mRNA-1:exon:544;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1394295 | 1394343 | 1394295 | ID=Msa0932960-mRNA-1:exon:543;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1394417 | 1394484 | 1394417 | ID=Msa0932960-mRNA-1:exon:542;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1394574 | 1394642 | 1394574 | ID=Msa0932960-mRNA-1:exon:541;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1394733 | 1394817 | 1394733 | ID=Msa0932960-mRNA-1:exon:540;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1394910 | 1394986 | 1394910 | ID=Msa0932960-mRNA-1:exon:539;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1395260 | 1395329 | 1395260 | ID=Msa0932960-mRNA-1:exon:538;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1395426 | 1395502 | 1395426 | ID=Msa0932960-mRNA-1:exon:537;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1395578 | 1395641 | 1395578 | ID=Msa0932960-mRNA-1:exon:536;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1395762 | 1395855 | 1395762 | ID=Msa0932960-mRNA-1:exon:535;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1395961 | 1396057 | 1395961 | ID=Msa0932960-mRNA-1:exon:534;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1396433 | 1396471 | 1396433 | ID=Msa0932960-mRNA-1:exon:533;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1396601 | 1396665 | 1396601 | ID=Msa0932960-mRNA-1:exon:532;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1397038 | 1397146 | 1397038 | ID=Msa0932960-mRNA-1:exon:531;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1397249 | 1397361 | 1397249 | ID=Msa0932960-mRNA-1:exon:530;Parent=Msa0932960-mRNA-1 |
| chr6_3 | exon | 1397469 | 1397608 | 1397469 | ID=Msa0932960-mRNA-1:exon:529;Parent=Msa0932960-mRNA-1 |
| chr6_3 | five_prime_UTR | 1397536 | 1397608 | 1397536 | ID=Msa0932960-mRNA-1:five_prime_utr;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1397469 | 1397535 | 1397469 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1397249 | 1397361 | 1397249 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1397038 | 1397146 | 1397038 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1396601 | 1396665 | 1396601 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1396433 | 1396471 | 1396433 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1395961 | 1396057 | 1395961 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1395762 | 1395855 | 1395762 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1395578 | 1395641 | 1395578 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1395426 | 1395502 | 1395426 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1395260 | 1395329 | 1395260 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1394910 | 1394986 | 1394910 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1394733 | 1394817 | 1394733 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1394574 | 1394642 | 1394574 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1394417 | 1394484 | 1394417 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1394295 | 1394343 | 1394295 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | CDS | 1393835 | 1394206 | 1393835 | ID=Msa0932960-mRNA-1:cds;Parent=Msa0932960-mRNA-1 |
| chr6_3 | three_prime_UTR | 1393725 | 1393834 | 1393725 | ID=Msa0932960-mRNA-1:three_prime_utr;Parent=Msa0932960-mRNA-1 |
| chr6_3 | three_prime_UTR | 1393408 | 1393630 | 1393408 | ID=Msa0932960-mRNA-1:three_prime_utr;Parent=Msa0932960-mRNA-1 |
| chr6_3 | three_prime_UTR | 1393188 | 1393364 | 1393188 | ID=Msa0932960-mRNA-1:three_prime_utr;Parent=Msa0932960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
