Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346750 | XP_003617013.1 | 100.000 | 103 | 0 | 0 | 451 | 553 | 568 | 670 | 4.77e-63 | 229 |
| Msa1346750 | XP_003617013.1 | 99.101 | 445 | 4 | 0 | 7 | 451 | 1 | 445 | 0.0 | 890 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346750 | sp|Q39238|TSL_ARATH | 58.969 | 485 | 172 | 9 | 7 | 472 | 1 | 477 | 4.36e-177 | 519 |
| Msa1346750 | sp|Q39238|TSL_ARATH | 82.692 | 104 | 17 | 1 | 451 | 553 | 585 | 688 | 3.78e-55 | 200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346750 | G7KHC0 | 100.000 | 103 | 0 | 0 | 451 | 553 | 568 | 670 | 2.28e-63 | 229 |
| Msa1346750 | G7KHC0 | 99.101 | 445 | 4 | 0 | 7 | 451 | 1 | 445 | 0.0 | 890 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008220 | Msa1346750 | 0.805371 | 1.378698e-49 | -8.615850e-47 |
| Msa0010770 | Msa1346750 | 0.815177 | 1.056479e-51 | -8.615850e-47 |
| Msa0017390 | Msa1346750 | 0.813401 | 2.607452e-51 | -8.615850e-47 |
| Msa0022750 | Msa1346750 | -0.828827 | 7.239342e-55 | -8.615850e-47 |
| Msa0027320 | Msa1346750 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
| Msa0027390 | Msa1346750 | 0.824400 | 8.238437e-54 | -8.615850e-47 |
| Msa0031180 | Msa1346750 | 0.818165 | 2.260364e-52 | -8.615850e-47 |
| Msa0031820 | Msa1346750 | 0.818333 | 2.070043e-52 | -8.615850e-47 |
| Msa0037160 | Msa1346750 | 0.839349 | 1.671159e-57 | -8.615850e-47 |
| Msa0039250 | Msa1346750 | 0.817224 | 3.684467e-52 | -8.615850e-47 |
| Msa0040450 | Msa1346750 | 0.803972 | 2.701111e-49 | -8.615850e-47 |
| Msa0043500 | Msa1346750 | 0.839722 | 1.337197e-57 | -8.615850e-47 |
| Msa0043650 | Msa1346750 | 0.828986 | 6.626410e-55 | -8.615850e-47 |
| Msa0045340 | Msa1346750 | 0.823471 | 1.360711e-53 | -8.615850e-47 |
| Msa0049790 | Msa1346750 | 0.803929 | 2.756558e-49 | -8.615850e-47 |
| Msa0054820 | Msa1346750 | 0.848616 | 5.472284e-60 | -8.615850e-47 |
| Msa0056450 | Msa1346750 | 0.828953 | 6.748537e-55 | -8.615850e-47 |
| Msa0062120 | Msa1346750 | 0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0065550 | Msa1346750 | 0.801651 | 8.144057e-49 | -8.615850e-47 |
| Msa0070170 | Msa1346750 | 0.851418 | 8.994080e-61 | -8.615850e-47 |
| Msa0078480 | Msa1346750 | 0.824914 | 6.234221e-54 | -8.615850e-47 |
| Msa0096580 | Msa1346750 | 0.816082 | 6.644109e-52 | -8.615850e-47 |
| Msa0100160 | Msa1346750 | 0.851253 | 1.000971e-60 | -8.615850e-47 |
| Msa0101880 | Msa1346750 | 0.821139 | 4.731191e-53 | -8.615850e-47 |
| Msa0103250 | Msa1346750 | 0.803101 | 4.092802e-49 | -8.615850e-47 |
| Msa0108390 | Msa1346750 | 0.814581 | 1.432025e-51 | -8.615850e-47 |
| Msa1346750 | Msa1359560 | 0.846360 | 2.280832e-59 | -8.615850e-47 |
| Msa1346750 | Msa1364430 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
| Msa1346750 | Msa1365760 | 0.830936 | 2.218184e-55 | -8.615850e-47 |
| Msa1346750 | Msa1371940 | 0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa1346750 | Msa1382790 | 0.813569 | 2.395445e-51 | -8.615850e-47 |
| Msa1346750 | Msa1384870 | 0.830618 | 2.653823e-55 | -8.615850e-47 |
| Msa1346750 | Msa1388450 | 0.805393 | 1.364504e-49 | -8.615850e-47 |
| Msa1346750 | Msa1389880 | 0.810626 | 1.049959e-50 | -8.615850e-47 |
| Msa1346750 | Msa1415940 | 0.822480 | 2.316734e-53 | -8.615850e-47 |
| Msa1346750 | Msa1420250 | 0.812149 | 4.901186e-51 | -8.615850e-47 |
| Msa1346750 | Msa1422840 | 0.813915 | 2.009869e-51 | -8.615850e-47 |
| Msa1346750 | Msa1424780 | 0.840390 | 8.950612e-58 | -8.615850e-47 |
| Msa1346750 | Msa1433220 | 0.814365 | 1.599062e-51 | -8.615850e-47 |
| Msa1346750 | Msa1437210 | 0.820084 | 8.269198e-53 | -8.615850e-47 |
| Msa1346750 | Msa1438520 | 0.820099 | 8.201973e-53 | -8.615850e-47 |
| Msa1346750 | Msa1439610 | 0.809847 | 1.545650e-50 | -8.615850e-47 |
| Msa1346750 | Msa1446780 | 0.816956 | 4.233385e-52 | -8.615850e-47 |
| Msa1346750 | Msa1464290 | 0.823184 | 1.588225e-53 | -8.615850e-47 |
| Msa0603670 | Msa1346750 | 0.825452 | 4.652947e-54 | -8.615850e-47 |
| Msa0610500 | Msa1346750 | 0.825827 | 3.790352e-54 | -8.615850e-47 |
| Msa0615220 | Msa1346750 | 0.814120 | 1.811558e-51 | -8.615850e-47 |
| Msa0618950 | Msa1346750 | 0.800573 | 1.353027e-48 | -8.615850e-47 |
| Msa0619920 | Msa1346750 | 0.803593 | 3.237763e-49 | -8.615850e-47 |
| Msa0626220 | Msa1346750 | 0.818159 | 2.266455e-52 | -8.615850e-47 |
| Msa0636020 | Msa1346750 | 0.836238 | 1.052121e-56 | -8.615850e-47 |
| Msa0637900 | Msa1346750 | 0.816762 | 4.679669e-52 | -8.615850e-47 |
| Msa0638350 | Msa1346750 | 0.807221 | 5.618741e-50 | -8.615850e-47 |
| Msa0651150 | Msa1346750 | 0.832101 | 1.145741e-55 | -8.615850e-47 |
| Msa0652690 | Msa1346750 | 0.819872 | 9.242393e-53 | -8.615850e-47 |
| Msa0659990 | Msa1346750 | 0.801437 | 9.010168e-49 | -8.615850e-47 |
| Msa0661320 | Msa1346750 | 0.808046 | 3.753678e-50 | -8.615850e-47 |
| Msa0667790 | Msa1346750 | 0.813791 | 2.140877e-51 | -8.615850e-47 |
| Msa0675990 | Msa1346750 | 0.850477 | 1.655362e-60 | -8.615850e-47 |
| Msa0682090 | Msa1346750 | 0.815991 | 6.961219e-52 | -8.615850e-47 |
| Msa0682140 | Msa1346750 | 0.815956 | 7.088539e-52 | -8.615850e-47 |
| Msa0683510 | Msa1346750 | 0.800026 | 1.748109e-48 | -8.615850e-47 |
| Msa0687450 | Msa1346750 | 0.801666 | 8.086127e-49 | -8.615850e-47 |
| Msa0689760 | Msa1346750 | 0.815735 | 7.938067e-52 | -8.615850e-47 |
| Msa0705390 | Msa1346750 | 0.810586 | 1.070594e-50 | -8.615850e-47 |
| Msa0710270 | Msa1346750 | 0.803675 | 3.113565e-49 | -8.615850e-47 |
| Msa0713870 | Msa1346750 | 0.800688 | 1.281376e-48 | -8.615850e-47 |
| Msa0715410 | Msa1346750 | 0.801600 | 8.342383e-49 | -8.615850e-47 |
| Msa0716860 | Msa1346750 | 0.813136 | 2.982426e-51 | -8.615850e-47 |
| Msa0716970 | Msa1346750 | 0.806794 | 6.917747e-50 | -8.615850e-47 |
| Msa0737570 | Msa1346750 | 0.802227 | 6.199015e-49 | -8.615850e-47 |
| Msa0743680 | Msa1346750 | 0.811994 | 5.298170e-51 | -8.615850e-47 |
| Msa0749400 | Msa1346750 | 0.824328 | 8.567549e-54 | -8.615850e-47 |
| Msa0756530 | Msa1346750 | 0.824004 | 1.020519e-53 | -8.615850e-47 |
| Msa0757800 | Msa1346750 | 0.818723 | 1.689437e-52 | -8.615850e-47 |
| Msa0777320 | Msa1346750 | 0.810430 | 1.157199e-50 | -8.615850e-47 |
| Msa0787850 | Msa1346750 | 0.817873 | 2.630197e-52 | -8.615850e-47 |
| Msa0788950 | Msa1346750 | 0.823137 | 1.628741e-53 | -8.615850e-47 |
| Msa0793140 | Msa1346750 | -0.810911 | 9.106270e-51 | -8.615850e-47 |
| Msa0795660 | Msa1346750 | 0.805801 | 1.119940e-49 | -8.615850e-47 |
| Msa0800700 | Msa1346750 | 0.812180 | 4.827337e-51 | -8.615850e-47 |
| Msa0805430 | Msa1346750 | 0.824341 | 8.505336e-54 | -8.615850e-47 |
| Msa0828660 | Msa1346750 | 0.806569 | 7.719368e-50 | -8.615850e-47 |
| Msa0829620 | Msa1346750 | 0.802400 | 5.713106e-49 | -8.615850e-47 |
| Msa0832090 | Msa1346750 | 0.809438 | 1.891881e-50 | -8.615850e-47 |
| Msa0122810 | Msa1346750 | 0.812459 | 4.194313e-51 | -8.615850e-47 |
| Msa0126230 | Msa1346750 | 0.808318 | 3.285128e-50 | -8.615850e-47 |
| Msa0126770 | Msa1346750 | 0.803949 | 2.730470e-49 | -8.615850e-47 |
| Msa0133720 | Msa1346750 | 0.819218 | 1.303717e-52 | -8.615850e-47 |
| Msa0133820 | Msa1346750 | 0.807656 | 4.544178e-50 | -8.615850e-47 |
| Msa0135420 | Msa1346750 | 0.812007 | 5.263492e-51 | -8.615850e-47 |
| Msa0139700 | Msa1346750 | 0.806299 | 8.799698e-50 | -8.615850e-47 |
| Msa0143850 | Msa1346750 | 0.801993 | 6.926306e-49 | -8.615850e-47 |
| Msa0144360 | Msa1346750 | 0.827283 | 1.704069e-54 | -8.615850e-47 |
| Msa0155330 | Msa1346750 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
| Msa0156230 | Msa1346750 | 0.814505 | 1.489192e-51 | -8.615850e-47 |
| Msa0160670 | Msa1346750 | 0.873573 | 1.324060e-67 | -8.615850e-47 |
| Msa0165300 | Msa1346750 | 0.830648 | 2.608440e-55 | -8.615850e-47 |
| Msa0171850 | Msa1346750 | 0.805471 | 1.314049e-49 | -8.615850e-47 |
| Msa0177210 | Msa1346750 | 0.820804 | 5.650526e-53 | -8.615850e-47 |
| Msa0178510 | Msa1346750 | 0.801027 | 1.092726e-48 | -8.615850e-47 |
| Msa0181230 | Msa1346750 | 0.816284 | 5.987017e-52 | -8.615850e-47 |
| Msa0185510 | Msa1346750 | 0.808608 | 2.848958e-50 | -8.615850e-47 |
| Msa0187030 | Msa1346750 | 0.806464 | 8.121490e-50 | -8.615850e-47 |
| Msa0188150 | Msa1346750 | 0.805608 | 1.229503e-49 | -8.615850e-47 |
| Msa0197660 | Msa1346750 | 0.820251 | 7.571855e-53 | -8.615850e-47 |
| Msa0208810 | Msa1346750 | 0.817537 | 3.131807e-52 | -8.615850e-47 |
| Msa0218350 | Msa1346750 | 0.816582 | 5.135554e-52 | -8.615850e-47 |
| Msa0225670 | Msa1346750 | 0.806808 | 6.871413e-50 | -8.615850e-47 |
| Msa0227230 | Msa1346750 | 0.807183 | 5.723245e-50 | -8.615850e-47 |
| Msa0230370 | Msa1346750 | 0.821511 | 3.884555e-53 | -8.615850e-47 |
| Msa0238230 | Msa1346750 | 0.807239 | 5.570893e-50 | -8.615850e-47 |
| Msa1224830 | Msa1346750 | 0.806918 | 6.514520e-50 | -8.615850e-47 |
| Msa1258340 | Msa1346750 | 0.803838 | 2.880057e-49 | -8.615850e-47 |
| Msa1282500 | Msa1346750 | 0.834340 | 3.172161e-56 | -8.615850e-47 |
| Msa1286550 | Msa1346750 | 0.808478 | 3.036557e-50 | -8.615850e-47 |
| Msa1286570 | Msa1346750 | 0.813286 | 2.764761e-51 | -8.615850e-47 |
| Msa1286610 | Msa1346750 | 0.834001 | 3.856597e-56 | -8.615850e-47 |
| Msa1296300 | Msa1346750 | 0.803928 | 2.757661e-49 | -8.615850e-47 |
| Msa1298370 | Msa1346750 | 0.826150 | 3.176340e-54 | -8.615850e-47 |
| Msa1307550 | Msa1346750 | 0.833316 | 5.720866e-56 | -8.615850e-47 |
| Msa1329450 | Msa1346750 | 0.803978 | 2.692824e-49 | -8.615850e-47 |
| Msa1329670 | Msa1346750 | 0.817559 | 3.096389e-52 | -8.615850e-47 |
| Msa1333680 | Msa1346750 | 0.821041 | 4.984261e-53 | -8.615850e-47 |
| Msa1333730 | Msa1346750 | 0.804958 | 1.682438e-49 | -8.615850e-47 |
| Msa1333890 | Msa1346750 | 0.803038 | 4.217545e-49 | -8.615850e-47 |
| Msa1338830 | Msa1346750 | 0.825948 | 3.547890e-54 | -8.615850e-47 |
| Msa1340040 | Msa1346750 | -0.800790 | 1.221403e-48 | -8.615850e-47 |
| Msa1340810 | Msa1346750 | 0.808491 | 3.017821e-50 | -8.615850e-47 |
| Msa0377440 | Msa1346750 | 0.801335 | 9.454254e-49 | -8.615850e-47 |
| Msa0378970 | Msa1346750 | 0.810422 | 1.162144e-50 | -8.615850e-47 |
| Msa0387370 | Msa1346750 | 0.819167 | 1.338702e-52 | -8.615850e-47 |
| Msa0392200 | Msa1346750 | 0.851251 | 1.002612e-60 | -8.615850e-47 |
| Msa0394690 | Msa1346750 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0398240 | Msa1346750 | 0.849865 | 2.457189e-60 | -8.615850e-47 |
| Msa0403660 | Msa1346750 | 0.810345 | 1.207373e-50 | -8.615850e-47 |
| Msa0410300 | Msa1346750 | 0.805236 | 1.471874e-49 | -8.615850e-47 |
| Msa0421300 | Msa1346750 | -0.802759 | 4.816961e-49 | -8.615850e-47 |
| Msa0428050 | Msa1346750 | 0.865914 | 4.178441e-65 | -8.615850e-47 |
| Msa0428240 | Msa1346750 | 0.805121 | 1.555048e-49 | -8.615850e-47 |
| Msa0432170 | Msa1346750 | 0.833311 | 5.736737e-56 | -8.615850e-47 |
| Msa0437400 | Msa1346750 | 0.805851 | 1.093367e-49 | -8.615850e-47 |
| Msa0451070 | Msa1346750 | 0.812627 | 3.855727e-51 | -8.615850e-47 |
| Msa0461590 | Msa1346750 | 0.812903 | 3.353276e-51 | -8.615850e-47 |
| Msa0468320 | Msa1346750 | 0.822937 | 1.813363e-53 | -8.615850e-47 |
| Msa0468800 | Msa1346750 | 0.811137 | 8.137622e-51 | -8.615850e-47 |
| Msa0473330 | Msa1346750 | 0.817400 | 3.362746e-52 | -8.615850e-47 |
| Msa0474390 | Msa1346750 | 0.840554 | 8.108277e-58 | -8.615850e-47 |
| Msa0474940 | Msa1346750 | 0.806173 | 9.352851e-50 | -8.615850e-47 |
| Msa0479200 | Msa1346750 | 0.815997 | 6.938723e-52 | -8.615850e-47 |
| Msa0480780 | Msa1346750 | 0.825884 | 3.674724e-54 | -8.615850e-47 |
| Msa0980940 | Msa1346750 | 0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa0990590 | Msa1346750 | 0.802299 | 5.991252e-49 | -8.615850e-47 |
| Msa1010070 | Msa1346750 | 0.837366 | 5.422994e-57 | -8.615850e-47 |
| Msa1025260 | Msa1346750 | 0.803114 | 4.067996e-49 | -8.615850e-47 |
| Msa1028590 | Msa1346750 | 0.801774 | 7.683608e-49 | -8.615850e-47 |
| Msa1032170 | Msa1346750 | 0.804415 | 2.183898e-49 | -8.615850e-47 |
| Msa1033970 | Msa1346750 | 0.812258 | 4.640732e-51 | -8.615850e-47 |
| Msa1036410 | Msa1346750 | 0.805916 | 1.059254e-49 | -8.615850e-47 |
| Msa1038080 | Msa1346750 | 0.814775 | 1.297170e-51 | -8.615850e-47 |
| Msa1040840 | Msa1346750 | 0.840054 | 1.095392e-57 | -8.615850e-47 |
| Msa1050910 | Msa1346750 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
| Msa1051600 | Msa1346750 | 0.807830 | 4.173891e-50 | -8.615850e-47 |
| Msa1068100 | Msa1346750 | 0.813772 | 2.161488e-51 | -8.615850e-47 |
| Msa1079860 | Msa1346750 | 0.816755 | 4.694913e-52 | -8.615850e-47 |
| Msa1082690 | Msa1346750 | 0.800908 | 1.155959e-48 | -8.615850e-47 |
| Msa1093260 | Msa1346750 | 0.816015 | 6.876114e-52 | -8.615850e-47 |
| Msa0239800 | Msa1346750 | 0.824009 | 1.017916e-53 | -8.615850e-47 |
| Msa0241470 | Msa1346750 | 0.802486 | 5.483858e-49 | -8.615850e-47 |
| Msa0245850 | Msa1346750 | 0.812994 | 3.203203e-51 | -8.615850e-47 |
| Msa0247170 | Msa1346750 | 0.810472 | 1.133399e-50 | -8.615850e-47 |
| Msa0253290 | Msa1346750 | 0.830204 | 3.350354e-55 | -8.615850e-47 |
| Msa0259220 | Msa1346750 | 0.809635 | 1.716588e-50 | -8.615850e-47 |
| Msa0269520 | Msa1346750 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0277820 | Msa1346750 | 0.807057 | 6.087492e-50 | -8.615850e-47 |
| Msa0290760 | Msa1346750 | 0.810240 | 1.271718e-50 | -8.615850e-47 |
| Msa0292120 | Msa1346750 | 0.806350 | 8.586178e-50 | -8.615850e-47 |
| Msa0299730 | Msa1346750 | 0.805525 | 1.280129e-49 | -8.615850e-47 |
| Msa0308460 | Msa1346750 | 0.800117 | 1.675461e-48 | -8.615850e-47 |
| Msa0308550 | Msa1346750 | 0.803636 | 3.171237e-49 | -8.615850e-47 |
| Msa0317510 | Msa1346750 | 0.826433 | 2.720100e-54 | -8.615850e-47 |
| Msa0317740 | Msa1346750 | 0.812456 | 4.202295e-51 | -8.615850e-47 |
| Msa0318720 | Msa1346750 | 0.816001 | 6.926586e-52 | -8.615850e-47 |
| Msa0320800 | Msa1346750 | 0.802930 | 4.440141e-49 | -8.615850e-47 |
| Msa0342010 | Msa1346750 | 0.828569 | 8.358430e-55 | -8.615850e-47 |
| Msa0346990 | Msa1346750 | 0.824082 | 9.787157e-54 | -8.615850e-47 |
| Msa0357020 | Msa1346750 | 0.816655 | 4.945588e-52 | -8.615850e-47 |
| Msa1109350 | Msa1346750 | 0.800799 | 1.216352e-48 | -8.615850e-47 |
| Msa1113010 | Msa1346750 | 0.828341 | 9.487104e-55 | -8.615850e-47 |
| Msa1118760 | Msa1346750 | 0.802308 | 5.966643e-49 | -8.615850e-47 |
| Msa1129690 | Msa1346750 | 0.812239 | 4.685285e-51 | -8.615850e-47 |
| Msa1158660 | Msa1346750 | 0.808609 | 2.847194e-50 | -8.615850e-47 |
| Msa1162830 | Msa1346750 | 0.811179 | 7.967621e-51 | -8.615850e-47 |
| Msa1164010 | Msa1346750 | 0.807595 | 4.680695e-50 | -8.615850e-47 |
| Msa1176270 | Msa1346750 | 0.809748 | 1.623040e-50 | -8.615850e-47 |
| Msa1179940 | Msa1346750 | 0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa1206160 | Msa1346750 | 0.800836 | 1.195646e-48 | -8.615850e-47 |
| Msa1208160 | Msa1346750 | 0.813505 | 2.474172e-51 | -8.615850e-47 |
| Msa0487780 | Msa1346750 | 0.819253 | 1.279740e-52 | -8.615850e-47 |
| Msa0506790 | Msa1346750 | 0.800288 | 1.546243e-48 | -8.615850e-47 |
| Msa0510290 | Msa1346750 | 0.835038 | 2.117720e-56 | -8.615850e-47 |
| Msa0512870 | Msa1346750 | 0.848981 | 4.332310e-60 | -8.615850e-47 |
| Msa0517090 | Msa1346750 | 0.817195 | 3.740843e-52 | -8.615850e-47 |
| Msa0518440 | Msa1346750 | 0.830486 | 2.858540e-55 | -8.615850e-47 |
| Msa0518810 | Msa1346750 | 0.829317 | 5.506701e-55 | -8.615850e-47 |
| Msa0521670 | Msa1346750 | 0.808614 | 2.840149e-50 | -8.615850e-47 |
| Msa0530100 | Msa1346750 | 0.820716 | 5.920473e-53 | -8.615850e-47 |
| Msa0532980 | Msa1346750 | 0.825230 | 5.249383e-54 | -8.615850e-47 |
| Msa0545060 | Msa1346750 | 0.812386 | 4.352170e-51 | -8.615850e-47 |
| Msa0574390 | Msa1346750 | 0.815255 | 1.015106e-51 | -8.615850e-47 |
| Msa0576680 | Msa1346750 | 0.837956 | 3.827706e-57 | -8.615850e-47 |
| Msa0597000 | Msa1346750 | 0.818261 | 2.150106e-52 | -8.615850e-47 |
| Msa0598160 | Msa1346750 | 0.815403 | 9.413445e-52 | -8.615850e-47 |
| Msa0843120 | Msa1346750 | -0.827383 | 1.613028e-54 | -8.615850e-47 |
| Msa0844390 | Msa1346750 | 0.839084 | 1.957636e-57 | -8.615850e-47 |
| Msa0861530 | Msa1346750 | 0.803045 | 4.203917e-49 | -8.615850e-47 |
| Msa0861830 | Msa1346750 | 0.808162 | 3.546364e-50 | -8.615850e-47 |
| Msa0868160 | Msa1346750 | 0.806976 | 6.333285e-50 | -8.615850e-47 |
| Msa0873860 | Msa1346750 | 0.824525 | 7.700264e-54 | -8.615850e-47 |
| Msa0888940 | Msa1346750 | 0.801988 | 6.942839e-49 | -8.615850e-47 |
| Msa0895310 | Msa1346750 | 0.800589 | 1.342667e-48 | -8.615850e-47 |
| Msa0896240 | Msa1346750 | 0.818961 | 1.491650e-52 | -8.615850e-47 |
| Msa0900620 | Msa1346750 | 0.812995 | 3.202625e-51 | -8.615850e-47 |
| Msa0906690 | Msa1346750 | 0.806744 | 7.089536e-50 | -8.615850e-47 |
| Msa0922030 | Msa1346750 | 0.823542 | 1.309448e-53 | -8.615850e-47 |
| Msa0926470 | Msa1346750 | 0.811176 | 7.980534e-51 | -8.615850e-47 |
| Msa0929950 | Msa1346750 | 0.806806 | 6.879841e-50 | -8.615850e-47 |
| Msa0939000 | Msa1346750 | 0.839320 | 1.700610e-57 | -8.615850e-47 |
| Msa0944660 | Msa1346750 | 0.820773 | 5.745510e-53 | -8.615850e-47 |
| Msa0945240 | Msa1346750 | 0.824475 | 7.912278e-54 | -8.615850e-47 |
| Msa0947530 | Msa1346750 | -0.842070 | 3.235596e-58 | -8.615850e-47 |
| Msa0955190 | Msa1346750 | 0.805342 | 1.398043e-49 | -8.615850e-47 |
| Msa0970320 | Msa1346750 | 0.811372 | 7.234381e-51 | -8.615850e-47 |
| Msa0975940 | Msa1346750 | 0.828298 | 9.715908e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346750 | MtrunA17_Chr5g0440001 | 99.101 | 445 | 4 | 0 | 7 | 451 | 1 | 445 | 0.0 | 890 |
| Msa1346750 | MtrunA17_Chr5g0440001 | 100.000 | 103 | 0 | 0 | 451 | 553 | 568 | 670 | 4.38e-67 | 229 |
| Msa1346750 | MtrunA17_Chr5g0440131 | 90.778 | 347 | 11 | 2 | 126 | 451 | 4 | 350 | 0.0 | 615 |
| Msa1346750 | MtrunA17_Chr5g0440131 | 99.029 | 103 | 1 | 0 | 451 | 553 | 473 | 575 | 5.68e-67 | 227 |
| Msa1346750 | MtrunA17_Chr5g0440171 | 81.266 | 395 | 60 | 6 | 83 | 472 | 9 | 394 | 0.0 | 573 |
| Msa1346750 | MtrunA17_Chr5g0440171 | 92.233 | 103 | 8 | 0 | 451 | 553 | 502 | 604 | 1.40e-60 | 211 |
| Msa1346750 | MtrunA17_Chr5g0440051 | 75.429 | 175 | 19 | 1 | 277 | 451 | 3 | 153 | 3.84e-83 | 264 |
| Msa1346750 | MtrunA17_Chr5g0440051 | 77.778 | 72 | 16 | 0 | 451 | 522 | 276 | 347 | 5.27e-31 | 124 |
| Msa1346750 | MtrunA17_Chr5g0440181 | 89.147 | 129 | 14 | 0 | 323 | 451 | 4 | 132 | 1.75e-74 | 241 |
| Msa1346750 | MtrunA17_Chr5g0440181 | 79.167 | 72 | 15 | 0 | 451 | 522 | 255 | 326 | 7.54e-32 | 126 |
| Msa1346750 | MtrunA17_Chr5g0440021 | 97.222 | 72 | 2 | 0 | 451 | 522 | 199 | 270 | 5.00e-43 | 154 |
| Msa1346750 | MtrunA17_Chr5g0440021 | 44.715 | 123 | 8 | 2 | 329 | 451 | 14 | 76 | 1.06e-19 | 89.4 |
| Msa1346750 | MtrunA17_Chr5g0440041 | 93.056 | 72 | 5 | 0 | 451 | 522 | 110 | 181 | 9.34e-42 | 148 |
| Msa1346750 | MtrunA17_Chr3g0093631 | 89.552 | 67 | 7 | 0 | 385 | 451 | 2 | 68 | 4.57e-36 | 134 |
| Msa1346750 | MtrunA17_Chr0c14g0493691 | 95.522 | 67 | 3 | 0 | 237 | 303 | 1 | 67 | 1.15e-35 | 128 |
| Msa1346750 | MtrunA17_Chr3g0093641 | 97.619 | 42 | 1 | 0 | 481 | 522 | 1 | 42 | 5.68e-23 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346750 | AT5G20930.1 | 58.969 | 485 | 172 | 9 | 7 | 472 | 1 | 477 | 4.43e-178 | 519 |
| Msa1346750 | AT5G20930.1 | 82.692 | 104 | 17 | 1 | 451 | 553 | 585 | 688 | 3.85e-56 | 200 |
Find 149 sgRNAs with CRISPR-Local
Find 576 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCCTTCTGTTTCTTCTTC+TGG | 0.084139 | tig0009225:-47483 | Msa1346750:CDS |
| GAAGATTGATTTGATTAAAT+TGG | 0.172266 | tig0009225:+48090 | Msa1346750:intergenic |
| TATTCTTGCCACCAAATTAT+TGG | 0.174724 | tig0009225:-38957 | Msa1346750:three_prime_UTR |
| CGACCCACGTAAAGAAAATT+AGG | 0.183917 | tig0009225:+47835 | Msa1346750:intergenic |
| TGCATTATAATCCAATAATT+TGG | 0.205731 | tig0009225:+38946 | Msa1346750:intergenic |
| TACGCCCTTCTAAACCTTCT+TGG | 0.225091 | tig0009225:-41609 | Msa1346750:CDS |
| GGCCTTCTGTTTCTTCTTCT+GGG | 0.249414 | tig0009225:-47482 | Msa1346750:CDS |
| TTCTTCATGCATTTATCATT+TGG | 0.264930 | tig0009225:-39083 | Msa1346750:three_prime_UTR |
| GTGAAGGAAAGTGAAAATTT+TGG | 0.298507 | tig0009225:+47946 | Msa1346750:intergenic |
| TCGTGAAGACACAATTATTA+AGG | 0.329793 | tig0009225:-40045 | Msa1346750:CDS |
| AAATTTGCCAGGAATTTATA+CGG | 0.332181 | tig0009225:-39364 | Msa1346750:intron |
| AATTTCTTCTTCAACAGTTT+CGG | 0.333500 | tig0009225:-44663 | Msa1346750:CDS |
| CCTTTCCAAGAAGGTTTAGA+AGG | 0.336937 | tig0009225:+41604 | Msa1346750:intergenic |
| TTACATAAGGCATGCAATTC+GGG | 0.338859 | tig0009225:-41302 | Msa1346750:CDS |
| GGAAGATGGTCAGGCGTTAA+AGG | 0.346557 | tig0009225:-43024 | Msa1346750:CDS |
| TATGTTGCATGCAAGCTTCA+TGG | 0.347747 | tig0009225:-41361 | Msa1346750:CDS |
| AAGATTGATTTGATTAAATT+GGG | 0.348058 | tig0009225:+48091 | Msa1346750:intergenic |
| GAAGTATTCTCTCTTGTGTT+TGG | 0.362711 | tig0009225:+40066 | Msa1346750:intergenic |
| TTGCTGAGCTCAAAGCATTC+AGG | 0.362890 | tig0009225:+40376 | Msa1346750:intergenic |
| GATCCGTTTCGTAATGATAA+TGG | 0.365983 | tig0009225:-44482 | Msa1346750:CDS |
| AGATGCAGAGGCTGGATTGC+TGG | 0.366029 | tig0009225:-41883 | Msa1346750:CDS |
| AGAATTTGTATAGGCTGTTA+AGG | 0.371183 | tig0009225:-39166 | Msa1346750:three_prime_UTR |
| CTCGACTAGCCAGCATTAAA+CGG | 0.372614 | tig0009225:-41827 | Msa1346750:CDS |
| TCTGGTCTGATCATTAGATT+TGG | 0.372885 | tig0009225:+44691 | Msa1346750:intergenic |
| TTCTTCACGTATGTGAGATA+TGG | 0.375947 | tig0009225:+39284 | Msa1346750:intergenic |
| TGAAGAAGAAATTTGTGTTC+TGG | 0.375982 | tig0009225:+44673 | Msa1346750:intergenic |
| GTTACATAAGGCATGCAATT+CGG | 0.378982 | tig0009225:-41303 | Msa1346750:CDS |
| CGTATGTGAGATATGGATCT+TGG | 0.381433 | tig0009225:+39291 | Msa1346750:intergenic |
| TGAAGGAAGACAAACTAGTT+TGG | 0.387629 | tig0009225:-44795 | Msa1346750:CDS |
| CTCTTCGGCAGACGTCCTTT+CGG | 0.387682 | tig0009225:-40095 | Msa1346750:CDS |
| AAGAAATCTGGTCGTGGAAG+AGG | 0.396651 | tig0009225:-44743 | Msa1346750:CDS |
| TCGTGAAATGAAACGCATTC+GGG | 0.403820 | tig0009225:-41679 | Msa1346750:CDS |
| TCGGAAATGTTGGTGTAATC+AGG | 0.407160 | tig0009225:-43155 | Msa1346750:intron |
| TATCATTTGGTTCAAAATAC+CGG | 0.415656 | tig0009225:-39070 | Msa1346750:three_prime_UTR |
| GCAAAACAAGGAAGTAATAG+AGG | 0.428335 | tig0009225:+48138 | Msa1346750:intergenic |
| TATACATCATTGACCCTTCA+AGG | 0.429544 | tig0009225:+39017 | Msa1346750:intergenic |
| GACCCACGTAAAGAAAATTA+GGG | 0.435878 | tig0009225:+47836 | Msa1346750:intergenic |
| CACCATTCGAGCTTCCAACT+TGG | 0.445681 | tig0009225:+47542 | Msa1346750:intergenic |
| TCCAACTTGGCAATCTTTGT+AGG | 0.446175 | tig0009225:+47555 | Msa1346750:intergenic |
| CAGGTTGATGTCTGGTCTGC+TGG | 0.447095 | tig0009225:-40137 | Msa1346750:CDS |
| TTCGTGAAATGAAACGCATT+CGG | 0.447560 | tig0009225:-41680 | Msa1346750:CDS |
| TTGAAGGGTCAATGATGTAT+AGG | 0.450282 | tig0009225:-39015 | Msa1346750:three_prime_UTR |
| TTGAGTTGACTTGACCTTGA+AGG | 0.450762 | tig0009225:-39031 | Msa1346750:three_prime_UTR |
| GCCTACAAAGATTGCCAAGT+TGG | 0.452437 | tig0009225:-47556 | Msa1346750:CDS |
| TTAGAAACAGTAGGTCTTGA+GGG | 0.452648 | tig0009225:+40005 | Msa1346750:intergenic |
| TGAGTTGACTTGACCTTGAA+GGG | 0.457948 | tig0009225:-39030 | Msa1346750:three_prime_UTR |
| TGAATCCTCCCTTTCCAAGA+AGG | 0.462463 | tig0009225:+41595 | Msa1346750:intergenic |
| TCAACAGTTTCGGCTTCAAA+TGG | 0.466296 | tig0009225:-44653 | Msa1346750:CDS |
| GATGCAAATAGAAAGAAATC+TGG | 0.469408 | tig0009225:-44755 | Msa1346750:CDS |
| GGTCGTGGAAGAGGGAGTTC+TGG | 0.470919 | tig0009225:-44734 | Msa1346750:CDS |
| AGAAGAAGCAAAGTTACATA+AGG | 0.471355 | tig0009225:-41315 | Msa1346750:CDS |
| TGGGCAATGGTCAATACATC+TGG | 0.473043 | tig0009225:+39311 | Msa1346750:intergenic |
| TGGAGTAGCAGCTGAAGAAA+TGG | 0.476210 | tig0009225:-47451 | Msa1346750:CDS |
| TGAGACCTGGGAAGATGGTC+AGG | 0.479728 | tig0009225:-43033 | Msa1346750:CDS |
| ATATCTGTCAGAATTTGTAT+AGG | 0.482828 | tig0009225:-39175 | Msa1346750:three_prime_UTR |
| CACAATTATTAAGGCGCGCA+AGG | 0.483137 | tig0009225:-40036 | Msa1346750:CDS |
| TGAAACTGATATCAGCAAAT+CGG | 0.484786 | tig0009225:+43230 | Msa1346750:intergenic |
| TTTCCTCTTTGATCACGAAT+GGG | 0.486322 | tig0009225:-47795 | Msa1346750:intron |
| TCTTCTTCTGGGAAATTCAG+TGG | 0.488625 | tig0009225:-47471 | Msa1346750:CDS |
| TGATAATGGTGCTTCATTAG+AGG | 0.489391 | tig0009225:-44468 | Msa1346750:intron |
| CTTCTAAACCTTCTTGGAAA+GGG | 0.490597 | tig0009225:-41603 | Msa1346750:CDS |
| TCGACTAGCCAGCATTAAAC+GGG | 0.492390 | tig0009225:-41826 | Msa1346750:intron |
| CTAGGGTTTGTTAAGAGTGG+TGG | 0.493497 | tig0009225:+48049 | Msa1346750:intergenic |
| GCAACTTACCCGTTTAATGC+TGG | 0.500123 | tig0009225:+41818 | Msa1346750:intergenic |
| GTGGAAAACAGGTTGATGTC+TGG | 0.502498 | tig0009225:-40145 | Msa1346750:intron |
| GTCGAATTCTTCGAACCAAT+CGG | 0.503177 | tig0009225:-47589 | Msa1346750:CDS |
| AGTCTAGGGTTTGTTAAGAG+TGG | 0.503763 | tig0009225:+48046 | Msa1346750:intergenic |
| ATTCGTGATCAAAGAGGAAA+AGG | 0.504840 | tig0009225:+47798 | Msa1346750:intergenic |
| TTCATGGTTTAAATGCTCAA+TGG | 0.506027 | tig0009225:-41345 | Msa1346750:CDS |
| AGCAAGACTAAAAGTACGAC+AGG | 0.513451 | tig0009225:-43190 | Msa1346750:CDS |
| GTATGTGAGATATGGATCTT+GGG | 0.514827 | tig0009225:+39292 | Msa1346750:intergenic |
| TTAACTGAGACCTGGGAAGA+TGG | 0.516049 | tig0009225:-43038 | Msa1346750:CDS |
| ATACATCTGGTCTCTCAGCC+TGG | 0.518193 | tig0009225:+39324 | Msa1346750:intergenic |
| CTAAACCTTCTTGGAAAGGG+AGG | 0.518567 | tig0009225:-41600 | Msa1346750:CDS |
| TTTGCTGATATCAGTTTCAA+AGG | 0.526129 | tig0009225:-43226 | Msa1346750:CDS |
| AGTGGTGGAATCAAAAGCTT+GGG | 0.526784 | tig0009225:+48064 | Msa1346750:intergenic |
| ATTATAATCCAATAATTTGG+TGG | 0.527729 | tig0009225:+38949 | Msa1346750:intergenic |
| TGAGGAGCAAATGAAACCTA+AGG | 0.527993 | tig0009225:-43541 | Msa1346750:intron |
| GAAGCTCGAATGGTGGGAAA+AGG | 0.529220 | tig0009225:-47534 | Msa1346750:CDS |
| TCTGGTTCAAGCAGAGGTCG+TGG | 0.532569 | tig0009225:-44716 | Msa1346750:CDS |
| AGGATTCAGCGAGGTGTACA+AGG | 0.532928 | tig0009225:-41580 | Msa1346750:intron |
| ATCTCAAATGAGTGAGGGAA+AGG | 0.533258 | tig0009225:-39136 | Msa1346750:three_prime_UTR |
| GAAGGAATTGAAAGATCTTG+AGG | 0.533969 | tig0009225:-43559 | Msa1346750:CDS |
| TACTGTTTCTAATGAGGCAA+AGG | 0.536433 | tig0009225:-39994 | Msa1346750:intron |
| AATCAGTTGAAGAAATGAAA+GGG | 0.540220 | tig0009225:+47892 | Msa1346750:intergenic |
| GATGGAATAGATGCAGAGGC+TGG | 0.540764 | tig0009225:-41891 | Msa1346750:CDS |
| CCTTCTAAACCTTCTTGGAA+AGG | 0.541495 | tig0009225:-41604 | Msa1346750:CDS |
| TATCTGTCCACAGTTAGAAA+AGG | 0.541834 | tig0009225:-44150 | Msa1346750:intron |
| TTCGGGATGAAGATGGTTCA+CGG | 0.544469 | tig0009225:-41662 | Msa1346750:CDS |
| ATGACCTTGGATGATATAAG+AGG | 0.545308 | tig0009225:+40349 | Msa1346750:intergenic |
| AGAGGTTAGACATACAAGTT+GGG | 0.546211 | tig0009225:+42992 | Msa1346750:intergenic |
| TTGGCACATGTAGGAACTGA+AGG | 0.546431 | tig0009225:-43577 | Msa1346750:intron |
| TGAAGCATCATTGCAAAACA+AGG | 0.548529 | tig0009225:+48126 | Msa1346750:intergenic |
| TGCAAAAGTTGTTGTGTTGG+AGG | 0.549250 | tig0009225:-44216 | Msa1346750:CDS |
| CTTTCCAAGAAGGTTTAGAA+GGG | 0.555578 | tig0009225:+41605 | Msa1346750:intergenic |
| AACTGTCTTAACTGAGACCT+GGG | 0.558445 | tig0009225:-43045 | Msa1346750:CDS |
| GAATCAGTTGAAGAAATGAA+AGG | 0.559765 | tig0009225:+47891 | Msa1346750:intergenic |
| TGCCAAGTTGGAAGCTCGAA+TGG | 0.559835 | tig0009225:-47544 | Msa1346750:CDS |
| GGACCGCTACGAACTAGAGA+AGG | 0.561150 | tig0009225:-41712 | Msa1346750:CDS |
| TTCTTATCTCAAATGAGTGA+GGG | 0.561259 | tig0009225:-39141 | Msa1346750:three_prime_UTR |
| AAACGCATTCGGGATGAAGA+TGG | 0.562115 | tig0009225:-41669 | Msa1346750:CDS |
| TCATTGAGACTCGGAAATGT+TGG | 0.563510 | tig0009225:-43165 | Msa1346750:CDS |
| GAGTGGTGGAATCAAAAGCT+TGG | 0.566808 | tig0009225:+48063 | Msa1346750:intergenic |
| AGAAATCTGGTCGTGGAAGA+GGG | 0.567691 | tig0009225:-44742 | Msa1346750:CDS |
| AAGACCTACTGTTTCTAATG+AGG | 0.569301 | tig0009225:-40000 | Msa1346750:CDS |
| TAACGCCTGACCATCTTCCC+AGG | 0.569356 | tig0009225:+43028 | Msa1346750:intergenic |
| ATTAGAAACAGTAGGTCTTG+AGG | 0.569928 | tig0009225:+40004 | Msa1346750:intergenic |
| ATGCCTGAAGATAAGGGTGA+TGG | 0.570834 | tig0009225:-41909 | Msa1346750:intron |
| AGGGTCAATGATGTATAGGT+AGG | 0.570941 | tig0009225:-39011 | Msa1346750:three_prime_UTR |
| AGTAGTGATGTTCATTGACA+TGG | 0.571545 | tig0009225:-39262 | Msa1346750:exon |
| TTTCTTATCTCAAATGAGTG+AGG | 0.571754 | tig0009225:-39142 | Msa1346750:three_prime_UTR |
| GAACTGTCTTAACTGAGACC+TGG | 0.573288 | tig0009225:-43046 | Msa1346750:CDS |
| GGGAGTTCTGGTTCAAGCAG+AGG | 0.577053 | tig0009225:-44722 | Msa1346750:CDS |
| CTATATCAGGTTGTTACTGA+AGG | 0.582887 | tig0009225:-44812 | Msa1346750:intron |
| GCACCATTATCATTACGAAA+CGG | 0.585310 | tig0009225:+44479 | Msa1346750:intergenic |
| CTGCTTCTCAGCAACAAGGT+TGG | 0.586766 | tig0009225:-47503 | Msa1346750:CDS |
| TCAACTGCTTCTCAGCAACA+AGG | 0.590574 | tig0009225:-47507 | Msa1346750:CDS |
| AATAGAAAGAAATCTGGTCG+TGG | 0.596379 | tig0009225:-44749 | Msa1346750:CDS |
| GACGCCTCTTATATCATCCA+AGG | 0.602777 | tig0009225:-40353 | Msa1346750:intron |
| CGACAGGACTCATTGAGACT+CGG | 0.604297 | tig0009225:-43174 | Msa1346750:CDS |
| TAGGCAGAGACTGATCCGAT+TGG | 0.604815 | tig0009225:+47574 | Msa1346750:intergenic |
| GGTTTAGAAGGGCGTAACGA+TGG | 0.606514 | tig0009225:+41616 | Msa1346750:intergenic |
| ACGTGCAAAAGTTGTTGTGT+TGG | 0.607960 | tig0009225:-44219 | Msa1346750:CDS |
| GAAACAACTACTCGAAACAA+AGG | 0.609976 | tig0009225:-42369 | Msa1346750:CDS |
| AAGTTGGAAGCTCGAATGGT+GGG | 0.614592 | tig0009225:-47540 | Msa1346750:CDS |
| ACATCATCGTTATCATCGTG+AGG | 0.615437 | tig0009225:+45088 | Msa1346750:intergenic |
| TGTGTTTGGTCATGTCCGAA+AGG | 0.620138 | tig0009225:+40080 | Msa1346750:intergenic |
| CTTTCTATTCCAGAATGGTG+CGG | 0.623023 | tig0009225:-45149 | Msa1346750:intron |
| CAAGTTGGAAGCTCGAATGG+TGG | 0.626529 | tig0009225:-47541 | Msa1346750:CDS |
| TCAGAATCACTTGAACTGCA+AGG | 0.632922 | tig0009225:+47423 | Msa1346750:intergenic |
| TGGGTGTGTTGATGTTGTGA+AGG | 0.634472 | tig0009225:+47930 | Msa1346750:intergenic |
| GGTGGAATCAAAAGCTTGGG+AGG | 0.638583 | tig0009225:+48067 | Msa1346750:intergenic |
| TTCCCTTCTCTAGTTCGTAG+CGG | 0.644251 | tig0009225:+41709 | Msa1346750:intergenic |
| CTGAGCTCAAAGCATTCAGG+AGG | 0.645161 | tig0009225:+40379 | Msa1346750:intergenic |
| GACCGCTACGAACTAGAGAA+GGG | 0.647954 | tig0009225:-41711 | Msa1346750:CDS |
| TTTGCCTCATTAGAAACAGT+AGG | 0.648415 | tig0009225:+39996 | Msa1346750:intergenic |
| GGGTGATGGAATAGATGCAG+AGG | 0.649260 | tig0009225:-41895 | Msa1346750:CDS |
| GTGGAATCAAAAGCTTGGGA+GGG | 0.652802 | tig0009225:+48068 | Msa1346750:intergenic |
| TTCCCAGAAGAAGAAACAGA+AGG | 0.654654 | tig0009225:+47480 | Msa1346750:intergenic |
| AGTTACAGAAGCAACAATGT+CGG | 0.664253 | tig0009225:-47634 | Msa1346750:CDS |
| GCGGTGTCTAACATATAACC+AGG | 0.666800 | tig0009225:-39342 | Msa1346750:CDS |
| TTACCCATTCGTGATCAAAG+AGG | 0.676459 | tig0009225:+47792 | Msa1346750:intergenic |
| ACAACTACTCGAAACAAAGG+AGG | 0.687624 | tig0009225:-42366 | Msa1346750:CDS |
| ACAGATATTCTGATGCTGAG+AGG | 0.691242 | tig0009225:+44166 | Msa1346750:intergenic |
| GAGATATGGATCTTGGGCAA+TGG | 0.691935 | tig0009225:+39298 | Msa1346750:intergenic |
| GGAAGATATTCTCATTCACG+AGG | 0.697452 | tig0009225:-41862 | Msa1346750:CDS |
| CAAATGAAAAGAAAATGCAG+CGG | 0.717428 | tig0009225:+38916 | Msa1346750:intergenic |
| TTTGCCAGGAATTTATACGG+CGG | 0.759334 | tig0009225:-39361 | Msa1346750:intron |
| TGGAAAGGGAGGATTCAGCG+AGG | 0.790703 | tig0009225:-41589 | Msa1346750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAAATATTATAAAA+AGG | + | tig0009225:43959-43978 | Msa1346750:intergenic | 0.0% |
| !!! | TTTTTATAATATTTTTATTT+AGG | - | tig0009225:43958-43977 | Msa1346750:intron | 0.0% |
| !!! | AATTGTTTTCTTTAATTTAT+AGG | + | tig0009225:43059-43078 | Msa1346750:intergenic | 10.0% |
| !!! | TAAATTTTAATGTTTGATTT+TGG | - | tig0009225:43467-43486 | Msa1346750:intron | 10.0% |
| !!! | TTATTTAAAATATAATGAAG+TGG | - | tig0009225:43627-43646 | Msa1346750:intron | 10.0% |
| !! | ATTCAATAAATAAATATGAA+GGG | + | tig0009225:44103-44122 | Msa1346750:intergenic | 10.0% |
| !! | AATTCAATAAATAAATATGA+AGG | + | tig0009225:44104-44123 | Msa1346750:intergenic | 10.0% |
| !! | TATTTATAAAAAGTAAGTAT+AGG | + | tig0009225:47644-47663 | Msa1346750:intergenic | 10.0% |
| !!! | AAGATTGATTTGATTAAATT+GGG | + | tig0009225:38975-38994 | Msa0421430:intergenic | 15.0% |
| !! | AAAAAAATCGTTTCTTTAAT+GGG | + | tig0009225:39327-39346 | Msa1346750:intergenic | 15.0% |
| !! | ACTAATGAAATATATATTTG+GGG | + | tig0009225:39899-39918 | Msa1346750:intergenic | 15.0% |
| !! | GACTAATGAAATATATATTT+GGG | + | tig0009225:39900-39919 | Msa1346750:intergenic | 15.0% |
| !! | TGACTAATGAAATATATATT+TGG | + | tig0009225:39901-39920 | Msa1346750:intergenic | 15.0% |
| !!! | ATTGTAATTTTGAAAATGTA+AGG | + | tig0009225:40251-40270 | Msa1346750:intergenic | 15.0% |
| !!! | CTAGATATTTTATTTTTTGA+AGG | - | tig0009225:40447-40466 | Msa1346750:intron | 15.0% |
| !! | ATAAAGTAAAAAAAAATGAC+AGG | + | tig0009225:40658-40677 | Msa1346750:intergenic | 15.0% |
| !! | ATTGTAATTATGAAAATTCA+AGG | + | tig0009225:41516-41535 | Msa1346750:intergenic | 15.0% |
| !!! | TCTTTAAGCAATAAATTTTA+TGG | - | tig0009225:42482-42501 | Msa1346750:intron | 15.0% |
| !! | TTTCATCTTTGTATTAAATT+AGG | - | tig0009225:42805-42824 | Msa1346750:intron | 15.0% |
| !!! | TTATTGTCATTTTTTAGTTT+GGG | + | tig0009225:43185-43204 | Msa1346750:intergenic | 15.0% |
| !!! | ATTATTGTCATTTTTTAGTT+TGG | + | tig0009225:43186-43205 | Msa1346750:intergenic | 15.0% |
| !!! | ATGAATTAGAAATTTTAAAG+AGG | - | tig0009225:43691-43710 | Msa1346750:intron | 15.0% |
| !!! | TTTTATTTAGGTTTTCTTAT+TGG | - | tig0009225:43970-43989 | Msa1346750:intron | 15.0% |
| !! | ACAATTTCTTCATAATATAT+TGG | - | tig0009225:44180-44199 | Msa1346750:CDS | 15.0% |
| !! | CAATTTCTTCATAATATATT+GGG | - | tig0009225:44181-44200 | Msa1346750:CDS | 15.0% |
| !!! | GATGAATAAATACAATTTTA+AGG | - | tig0009225:44487-44506 | Msa1346750:CDS | 15.0% |
| !!! | AATAAATACAATTTTAAGGA+TGG | - | tig0009225:44491-44510 | Msa1346750:CDS | 15.0% |
| !! | ATTATAACTAACATATATCT+TGG | - | tig0009225:44901-44920 | Msa1346750:intron | 15.0% |
| !! | AAAAAAAAAATTAATGACCT+TGG | + | tig0009225:46730-46749 | Msa1346750:intergenic | 15.0% |
| !! | TAATATAAATAAATGAACGA+TGG | + | tig0009225:47146-47165 | Msa1346750:intergenic | 15.0% |
| !! | TATATTATTCTATTATTCAG+TGG | - | tig0009225:47159-47178 | Msa1346750:intron | 15.0% |
| !!! | GAAGATTGATTTGATTAAAT+TGG | + | tig0009225:38976-38995 | Msa0421430:intergenic | 20.0% |
| !!! | CAAAGAATTAATTGATTTTG+TGG | + | tig0009225:39087-39106 | Msa0421430:intergenic | 20.0% |
| !!! | TTTTGTGGAAATTATGAAAT+GGG | + | tig0009225:39207-39226 | Msa0421430:intergenic | 20.0% |
| !! | GAAAAAAATCGTTTCTTTAA+TGG | + | tig0009225:39328-39347 | Msa1346750:intergenic | 20.0% |
| !!! | AAACGATTTTTTTCTCAAAA+GGG | - | tig0009225:39334-39353 | Msa1346750:CDS | 20.0% |
| !! | TTGCTTATTTGATAAATGAT+AGG | - | tig0009225:39740-39759 | Msa1346750:intron | 20.0% |
| !! | TGCTTATTTGATAAATGATA+GGG | - | tig0009225:39741-39760 | Msa1346750:intron | 20.0% |
| !!! | TAATTTTGAAAATGTAAGGA+GGG | + | tig0009225:40247-40266 | Msa1346750:intergenic | 20.0% |
| !! | TTTATAGCTCAAATGAAAAA+TGG | - | tig0009225:40535-40554 | Msa1346750:intron | 20.0% |
| !! | AGGATATATTCTGTATATAA+TGG | + | tig0009225:40638-40657 | Msa1346750:intergenic | 20.0% |
| !! | CATCTAACGAAATATATATT+CGG | + | tig0009225:41069-41088 | Msa1346750:intergenic | 20.0% |
| !! | TTATAAATTTGATACAGTCA+AGG | - | tig0009225:41658-41677 | Msa1346750:CDS | 20.0% |
| !!! | TATTTTTGTGTTTTCATTGT+TGG | - | tig0009225:41789-41808 | Msa1346750:intron | 20.0% |
| !!! | GTATTTTATTGTTGATTATC+TGG | - | tig0009225:41823-41842 | Msa1346750:intron | 20.0% |
| !! | GATTATCTGGAAAATATAAA+TGG | - | tig0009225:41836-41855 | Msa1346750:CDS | 20.0% |
| !! | AGAAAGAAATATGAAGATAA+GGG | + | tig0009225:41900-41919 | Msa1346750:intergenic | 20.0% |
| !! | TAGAAAGAAATATGAAGATA+AGG | + | tig0009225:41901-41920 | Msa1346750:intergenic | 20.0% |
| !! | TATAGTGATAGTTATTCATT+TGG | + | tig0009225:42236-42255 | Msa1346750:intergenic | 20.0% |
| !! | TAAAGAACCAAATATTTGAT+GGG | + | tig0009225:42468-42487 | Msa1346750:intergenic | 20.0% |
| !! | TTAAAGAACCAAATATTTGA+TGG | + | tig0009225:42469-42488 | Msa1346750:intergenic | 20.0% |
| !! | CATTAATAATGAATCATACA+CGG | - | tig0009225:43125-43144 | Msa1346750:intron | 20.0% |
| !! | CTATAAATTCAATTAGCAAA+TGG | + | tig0009225:43348-43367 | Msa1346750:intergenic | 20.0% |
| !! | GTAAATTGTAAATACGTATT+AGG | - | tig0009225:43395-43414 | Msa1346750:intron | 20.0% |
| !!! | TTATTTTCATCTTTTGATTG+TGG | - | tig0009225:43550-43569 | Msa1346750:CDS | 20.0% |
| !!! | TTTAAAATATAATGAAGTGG+TGG | - | tig0009225:43630-43649 | Msa1346750:intron | 20.0% |
| !! | GTATAAAAATTAAGTTAAGC+CGG | - | tig0009225:43763-43782 | Msa1346750:intron | 20.0% |
| !!! | TATTATATGAATTTTAGAGC+TGG | - | tig0009225:43995-44014 | Msa1346750:intron | 20.0% |
| !!! | AGTGTTTAACTATTTTGAAT+AGG | + | tig0009225:44222-44241 | Msa1346750:intergenic | 20.0% |
| !!! | TATATTTACGTGTTTCATTT+TGG | - | tig0009225:44383-44402 | Msa1346750:intron | 20.0% |
| !! | ATTCTAAATATCATCAAACA+AGG | - | tig0009225:44442-44461 | Msa1346750:intron | 20.0% |
| !! | TTCTAAATATCATCAAACAA+GGG | - | tig0009225:44443-44462 | Msa1346750:intron | 20.0% |
| !!! | GTGGTTTTTTTATTTTCAAT+TGG | - | tig0009225:44604-44623 | Msa1346750:intron | 20.0% |
| !! | TTATTCAAGAAAAAACAATC+TGG | - | tig0009225:44740-44759 | Msa1346750:CDS | 20.0% |
| !! | ATGTTAGTTATAATGACAAT+TGG | + | tig0009225:44895-44914 | Msa1346750:intergenic | 20.0% |
| !! | TATAAATAAGTAAATAGTGG+AGG | + | tig0009225:44979-44998 | Msa1346750:intergenic | 20.0% |
| !! | TCGTATAAATAAGTAAATAG+TGG | + | tig0009225:44982-45001 | Msa1346750:intergenic | 20.0% |
| !! | ATACAATAAATATCTGTTTC+AGG | - | tig0009225:45045-45064 | Msa1346750:intron | 20.0% |
| !! | AATTTAGCGAATATTATACA+AGG | - | tig0009225:45552-45571 | Msa1346750:intron | 20.0% |
| !! | TATTTACATTTGCCAATAAA+AGG | + | tig0009225:45616-45635 | Msa1346750:intergenic | 20.0% |
| !! | ACAATATTTATAAGCATGTT+TGG | + | tig0009225:46205-46224 | Msa1346750:intergenic | 20.0% |
| !!! | CTCTTTTATTCATGTAAATA+AGG | + | tig0009225:46372-46391 | Msa1346750:intergenic | 20.0% |
| !!! | CAAACCATTAACATTTTAAT+GGG | + | tig0009225:47308-47327 | Msa1346750:intergenic | 20.0% |
| !!! | TCAAACCATTAACATTTTAA+TGG | + | tig0009225:47309-47328 | Msa1346750:intergenic | 20.0% |
| !! | GAACCATAATAATATTTCTT+AGG | - | tig0009225:47429-47448 | Msa1346750:CDS | 20.0% |
| !! | ATGCCTAAGAAATATTATTA+TGG | + | tig0009225:47435-47454 | Msa1346750:intergenic | 20.0% |
| !!! | TGCAGAATTATAATTTTGAT+TGG | + | tig0009225:47568-47587 | Msa1346750:intergenic | 20.0% |
| !!! | AAAAGTAAGTATAGGTATTT+TGG | + | tig0009225:47636-47655 | Msa1346750:intergenic | 20.0% |
| !! | ATTATAATCCAATAATTTGG+TGG | + | tig0009225:48117-48136 | Msa1346750:intergenic | 20.0% |
| !! | TGCATTATAATCCAATAATT+TGG | + | tig0009225:48120-48139 | Msa1346750:intergenic | 20.0% |
| !! | TGAAGGAAAGTGAAAATTTT+GGG | + | tig0009225:39119-39138 | Msa0421430:intergenic | 25.0% |
| ! | AATCAGTTGAAGAAATGAAA+GGG | + | tig0009225:39174-39193 | Msa0421430:intergenic | 25.0% |
| !! | GTTTTGTGGAAATTATGAAA+TGG | + | tig0009225:39208-39227 | Msa0421430:intergenic | 25.0% |
| !! | TAAAGAAAATTAGGGTTTTG+TGG | + | tig0009225:39222-39241 | Msa0421430:intergenic | 25.0% |
| !! | GAAAAAAAAAACGAGTTTTG+AGG | + | tig0009225:39305-39324 | Msa1346750:intergenic | 25.0% |
| !!! | GAAACGATTTTTTTCTCAAA+AGG | - | tig0009225:39333-39352 | Msa1346750:CDS | 25.0% |
| ! | TTTACGAGTATATAGTTATC+TGG | - | tig0009225:39813-39832 | Msa1346750:intron | 25.0% |
| ! | TTACGAGTATATAGTTATCT+GGG | - | tig0009225:39814-39833 | Msa1346750:intron | 25.0% |
| !!! | AGTGTTTTTGTTAGTCATTT+AGG | - | tig0009225:39935-39954 | Msa1346750:intron | 25.0% |
| !!! | TAAATGCTGATTTGTTTTGT+TGG | - | tig0009225:40158-40177 | Msa1346750:intron | 25.0% |
| !!! | GTAATTTTGAAAATGTAAGG+AGG | + | tig0009225:40248-40267 | Msa1346750:intergenic | 25.0% |
| !! | ACTTGAAATTTTTGAACTCT+AGG | - | tig0009225:40413-40432 | Msa1346750:intron | 25.0% |
| !! | CTGTATATAATGGAAAAATG+TGG | + | tig0009225:40628-40647 | Msa1346750:intergenic | 25.0% |
| !! | GTATTTTCAATGAATTCGTA+TGG | - | tig0009225:40761-40780 | Msa1346750:intron | 25.0% |
| !! | AAAAAAATTGTTCTGGGTTA+GGG | + | tig0009225:40818-40837 | Msa1346750:intergenic | 25.0% |
| ! | AAAGGGAAAAAAATTGTTCT+GGG | + | tig0009225:40824-40843 | Msa1346750:intergenic | 25.0% |
| ! | AAAAGGGAAAAAAATTGTTC+TGG | + | tig0009225:40825-40844 | Msa1346750:intergenic | 25.0% |
| ! | CTCATTTATTTGTAGTGATA+GGG | - | tig0009225:40893-40912 | Msa1346750:intron | 25.0% |
| !!! | TTTGTCTATTGTTGTTTTGT+TGG | - | tig0009225:40941-40960 | Msa1346750:intron | 25.0% |
| ! | CGAATATATATTTCGTTAGA+TGG | - | tig0009225:41067-41086 | Msa1346750:intron | 25.0% |
| !!! | TTTTGTTTGTTTCGTTTAGT+TGG | - | tig0009225:41424-41443 | Msa1346750:intron | 25.0% |
| ! | CGATAAACAGATAAATAATG+AGG | + | tig0009225:41744-41763 | Msa1346750:intergenic | 25.0% |
| ! | TTTGATATTATAAACGCATG+CGG | - | tig0009225:41766-41785 | Msa1346750:intron | 25.0% |
| ! | TATTTCTTTCTATTCCAGAA+TGG | - | tig0009225:41909-41928 | Msa1346750:intron | 25.0% |
| ! | AAAATACTAGTAACAGAAGA+TGG | + | tig0009225:42149-42168 | Msa1346750:intergenic | 25.0% |
| ! | TGATAGTTATTCATTTGGAA+TGG | + | tig0009225:42231-42250 | Msa1346750:intergenic | 25.0% |
| ! | TGAATAACTATCACTATATC+AGG | - | tig0009225:42238-42257 | Msa1346750:intron | 25.0% |
| ! | AATTTCTTCTTCAACAGTTT+CGG | - | tig0009225:42400-42419 | Msa1346750:intron | 25.0% |
| ! | CATCTTTGTATTAAATTAGG+AGG | - | tig0009225:42808-42827 | Msa1346750:intron | 25.0% |
| ! | TACACTGTATTTCTTATAGA+AGG | - | tig0009225:43207-43226 | Msa1346750:CDS | 25.0% |
| ! | GTATTAGGTAATAGAATTGA+CGG | - | tig0009225:43410-43429 | Msa1346750:intron | 25.0% |
| ! | GATGAAAATAATCAAACCTT+AGG | + | tig0009225:43541-43560 | Msa1346750:intergenic | 25.0% |
| ! | TCTTACTCCAAAATAAGTTA+AGG | - | tig0009225:43723-43742 | Msa1346750:intron | 25.0% |
| ! | TTTGTTCTCTACAAAATTCA+AGG | + | tig0009225:43805-43824 | Msa1346750:intergenic | 25.0% |
| ! | TTGAATTTATTATGCACCAA+TGG | - | tig0009225:44117-44136 | Msa1346750:intron | 25.0% |
| ! | ATCATACTTAGAAATACCAT+TGG | + | tig0009225:44136-44155 | Msa1346750:intergenic | 25.0% |
| !!! | TTTTGGTAACAATGGTTTTA+TGG | - | tig0009225:44400-44419 | Msa1346750:intron | 25.0% |
| !!! | TTTGGTAACAATGGTTTTAT+GGG | - | tig0009225:44401-44420 | Msa1346750:intron | 25.0% |
| !! | TTTTCCTTTTCAGTACTATT+AGG | - | tig0009225:44534-44553 | Msa1346750:intron | 25.0% |
| !!! | ATGTTTCTATAACTTTTCTG+TGG | - | tig0009225:44582-44601 | Msa1346750:intron | 25.0% |
| ! | AAACAAATTACATAGTGTTC+TGG | + | tig0009225:44938-44957 | Msa1346750:intergenic | 25.0% |
| !!! | GGTTTGAATTTTGTTTTTCT+TGG | - | tig0009225:45122-45141 | Msa1346750:CDS | 25.0% |
| ! | TAAAGAGGAAATAGAATAAG+CGG | + | tig0009225:45278-45297 | Msa1346750:intergenic | 25.0% |
| ! | TTATCTTCATAAAACAGATG+AGG | + | tig0009225:45901-45920 | Msa1346750:intergenic | 25.0% |
| !!! | ATTTTAGTTCAGATTTTCCA+AGG | - | tig0009225:46346-46365 | Msa1346750:intron | 25.0% |
| !! | AAGTTTAAAACCAACAAGTT+TGG | + | tig0009225:46599-46618 | Msa1346750:intergenic | 25.0% |
| ! | GCAAATCAAAAATGAAAGAA+AGG | + | tig0009225:46655-46674 | Msa1346750:intergenic | 25.0% |
| !!! | TTCTTTCATTTTTGATTTGC+AGG | - | tig0009225:46655-46674 | Msa1346750:intron | 25.0% |
| !!! | TTGTTTTATCAAATGCTCTT+CGG | - | tig0009225:46953-46972 | Msa1346750:intron | 25.0% |
| ! | AATGCCCATTAAAATGTTAA+TGG | - | tig0009225:47301-47320 | Msa1346750:intron | 25.0% |
| !!! | AAGTATAGGTATTTTGGATT+TGG | + | tig0009225:47630-47649 | Msa1346750:intergenic | 25.0% |
| ! | AAATTTGCCAGGAATTTATA+CGG | - | tig0009225:47699-47718 | Msa1346750:intron | 25.0% |
| ! | ATATCTGTCAGAATTTGTAT+AGG | - | tig0009225:47888-47907 | Msa1346750:five_prime_UTR | 25.0% |
| !!! | ACAAGAATTCCTTTTAGAAT+GGG | + | tig0009225:47959-47978 | Msa1346750:intergenic | 25.0% |
| !!! | AACAAGAATTCCTTTTAGAA+TGG | + | tig0009225:47960-47979 | Msa1346750:intergenic | 25.0% |
| ! | TTCTTCATGCATTTATCATT+TGG | - | tig0009225:47980-47999 | Msa1346750:five_prime_UTR | 25.0% |
| !! | TATCATTTGGTTCAAAATAC+CGG | - | tig0009225:47993-48012 | Msa1346750:five_prime_UTR | 25.0% |
| ! | GTGAAGGAAAGTGAAAATTT+TGG | + | tig0009225:39120-39139 | Msa0421430:intergenic | 30.0% |
| AGGGTCAAAAAATTTACGAT+GGG | + | tig0009225:39155-39174 | Msa0421430:intergenic | 30.0% | |
| AAGGGTCAAAAAATTTACGA+TGG | + | tig0009225:39156-39175 | Msa0421430:intergenic | 30.0% | |
| GAATCAGTTGAAGAAATGAA+AGG | + | tig0009225:39175-39194 | Msa0421430:intergenic | 30.0% | |
| ! | AAACCCTAATTTTCTTTACG+TGG | - | tig0009225:39224-39243 | Msa1346750:three_prime_UTR | 30.0% |
| ! | AACCCTAATTTTCTTTACGT+GGG | - | tig0009225:39225-39244 | Msa1346750:three_prime_UTR | 30.0% |
| !!! | AAAAACGAGTTTTGAGGATT+TGG | + | tig0009225:39299-39318 | Msa1346750:intergenic | 30.0% |
| TTACGAGGTTATTGTGATTA+TGG | - | tig0009225:39364-39383 | Msa1346750:intron | 30.0% | |
| ACATTCAAAGACGTTAGTAA+CGG | + | tig0009225:39859-39878 | Msa1346750:intergenic | 30.0% | |
| CTTATTTGCTTGTAGTGATT+GGG | - | tig0009225:40131-40150 | Msa1346750:CDS | 30.0% | |
| CCTAACGAAAGATATATTTG+GGG | + | tig0009225:40285-40304 | Msa1346750:intergenic | 30.0% | |
| GCCTAACGAAAGATATATTT+GGG | + | tig0009225:40286-40305 | Msa1346750:intergenic | 30.0% | |
| CAAATATATCTTTCGTTAGG+CGG | - | tig0009225:40285-40304 | Msa1346750:intron | 30.0% | |
| ! | GTGTCTTTTGTTAGTAAGTT+AGG | - | tig0009225:40322-40341 | Msa1346750:intron | 30.0% |
| ! | ACCCCATCTAAAACTAAAAT+CGG | - | tig0009225:40558-40577 | Msa1346750:intron | 30.0% |
| !!! | ACCCGATTTTAGTTTTAGAT+GGG | + | tig0009225:40563-40582 | Msa1346750:intergenic | 30.0% |
| !!! | AGTGTGTTTTTTTTCCGTTA+TGG | - | tig0009225:40718-40737 | Msa1346750:intron | 30.0% |
| AAAATACGATGATATGTTCC+AGG | + | tig0009225:40748-40767 | Msa1346750:intergenic | 30.0% | |
| ! | GAAAAAAATTGTTCTGGGTT+AGG | + | tig0009225:40819-40838 | Msa1346750:intergenic | 30.0% |
| ! | TTTTTCCCTTTTTATCTGCA+AGG | - | tig0009225:40833-40852 | Msa1346750:intron | 30.0% |
| GCTCATTTATTTGTAGTGAT+AGG | - | tig0009225:40892-40911 | Msa1346750:intron | 30.0% | |
| TTATCGAGTAGATAGTCATT+TGG | - | tig0009225:40976-40995 | Msa1346750:intron | 30.0% | |
| TATCGAGTAGATAGTCATTT+GGG | - | tig0009225:40977-40996 | Msa1346750:intron | 30.0% | |
| TTGATACATTCAAACGAAGA+TGG | + | tig0009225:41030-41049 | Msa1346750:intergenic | 30.0% | |
| !! | GTGTCGTTTGTTAATAAGTT+AGG | - | tig0009225:41104-41123 | Msa1346750:intron | 30.0% |
| TTTGAGTGTATGCATTTATG+AGG | - | tig0009225:41313-41332 | Msa1346750:CDS | 30.0% | |
| TTATTGAGTAAATAGCCATC+TGG | - | tig0009225:41459-41478 | Msa1346750:intron | 30.0% | |
| TATTGAGTAAATAGCCATCT+GGG | - | tig0009225:41460-41479 | Msa1346750:intron | 30.0% | |
| CCAAACGAAAGATATATTTG+GGG | + | tig0009225:41545-41564 | Msa1346750:intergenic | 30.0% | |
| GCCAAACGAAAGATATATTT+GGG | + | tig0009225:41546-41565 | Msa1346750:intergenic | 30.0% | |
| !! | GTGTCTTTTGTTTGTGAATA+TGG | - | tig0009225:41582-41601 | Msa1346750:CDS | 30.0% |
| GAGGATAAACAAAGAGTAAA+CGG | + | tig0009225:41725-41744 | Msa1346750:intergenic | 30.0% | |
| !!! | TGCTGAGGTTTGTTTTTATA+TGG | - | tig0009225:42007-42026 | Msa1346750:intron | 30.0% |
| !!! | TGAGGTTTGTTTTTATATGG+TGG | - | tig0009225:42010-42029 | Msa1346750:intron | 30.0% |
| ACTTCAACAATTGTAAGAAG+TGG | - | tig0009225:42173-42192 | Msa1346750:intron | 30.0% | |
| GATGCAAATAGAAAGAAATC+TGG | - | tig0009225:42308-42327 | Msa1346750:intron | 30.0% | |
| TGAAGAAGAAATTTGTGTTC+TGG | + | tig0009225:42393-42412 | Msa1346750:intergenic | 30.0% | |
| GTTACTTCCCATCAAATATT+TGG | - | tig0009225:42458-42477 | Msa1346750:intron | 30.0% | |
| !! | GAACTCATATTTTTGTTTGC+AGG | - | tig0009225:42544-42563 | Msa1346750:intron | 30.0% |
| !! | TCATATTTTTGTTTGCAGGA+TGG | - | tig0009225:42548-42567 | Msa1346750:intron | 30.0% |
| !!! | TTTTAAGGCAAGTAGAAGAA+TGG | - | tig0009225:42655-42674 | Msa1346750:intron | 30.0% |
| ! | TTTAAGGCAAGTAGAAGAAT+GGG | - | tig0009225:42656-42675 | Msa1346750:intron | 30.0% |
| AATGTCATTGAGATATGTTG+GGG | + | tig0009225:42738-42757 | Msa1346750:intergenic | 30.0% | |
| CAATGTCATTGAGATATGTT+GGG | + | tig0009225:42739-42758 | Msa1346750:intergenic | 30.0% | |
| ! | TCATATACCTTTTCTAACTG+TGG | + | tig0009225:42923-42942 | Msa1346750:intergenic | 30.0% |
| ! | TTCGCTCAAATTTTACTCAT+TGG | - | tig0009225:43090-43109 | Msa1346750:intron | 30.0% |
| CTCAGATTCAGCAAAATTTA+AGG | - | tig0009225:43159-43178 | Msa1346750:CDS | 30.0% | |
| GGTTGTTGAAATTAATGTGA+TGG | - | tig0009225:43431-43450 | Msa1346750:intron | 30.0% | |
| ! | CAATGCTCCTTAACTTATTT+TGG | + | tig0009225:43733-43752 | Msa1346750:intergenic | 30.0% |
| TGAAACTGATATCAGCAAAT+CGG | + | tig0009225:43836-43855 | Msa1346750:intergenic | 30.0% | |
| TTTGCTGATATCAGTTTCAA+AGG | - | tig0009225:43837-43856 | Msa1346750:intron | 30.0% | |
| AAATATGAAGGGAAAGAAAG+AGG | + | tig0009225:44092-44111 | Msa1346750:intergenic | 30.0% | |
| AAAATGCATATGTCAAGCAT+TGG | + | tig0009225:44270-44289 | Msa1346750:intergenic | 30.0% | |
| !! | GTGTTTCATTTTGGTAACAA+TGG | - | tig0009225:44392-44411 | Msa1346750:intron | 30.0% |
| ! | ATAGTACTGAAAAGGAAAAC+AGG | + | tig0009225:44533-44552 | Msa1346750:intergenic | 30.0% |
| ! | AATGCCTAATAGTACTGAAA+AGG | + | tig0009225:44541-44560 | Msa1346750:intergenic | 30.0% |
| ! | TTTCTATAACTTTTCTGTGG+TGG | - | tig0009225:44585-44604 | Msa1346750:intron | 30.0% |
| GACAAGTGTTAACAGAAAAA+AGG | + | tig0009225:44779-44798 | Msa1346750:intergenic | 30.0% | |
| TTATTCTGCTCACTTTCTAA+TGG | - | tig0009225:45101-45120 | Msa1346750:CDS | 30.0% | |
| TACTTCAAATCACTGCAAAA+AGG | + | tig0009225:45643-45662 | Msa1346750:intergenic | 30.0% | |
| TGAAGTAAAAAATTTCCAGC+AGG | - | tig0009225:45656-45675 | Msa1346750:intron | 30.0% | |
| TTCATGGTTTAAATGCTCAA+TGG | - | tig0009225:45718-45737 | Msa1346750:intron | 30.0% | |
| AGAAGAAGCAAAGTTACATA+AGG | - | tig0009225:45748-45767 | Msa1346750:intron | 30.0% | |
| GTATAATATTCACAAGACCT+TGG | - | tig0009225:45785-45804 | Msa1346750:intron | 30.0% | |
| ATAAACGAACAATATGACGA+TGG | + | tig0009225:45812-45831 | Msa1346750:intergenic | 30.0% | |
| ATCGTCATATTGTTCGTTTA+TGG | - | tig0009225:45811-45830 | Msa1346750:intron | 30.0% | |
| TCGTCATATTGTTCGTTTAT+GGG | - | tig0009225:45812-45831 | Msa1346750:intron | 30.0% | |
| ! | TTGACTTTTGTGATAGACTA+TGG | - | tig0009225:45929-45948 | Msa1346750:intron | 30.0% |
| ! | TGACTTTTGTGATAGACTAT+GGG | - | tig0009225:45930-45949 | Msa1346750:intron | 30.0% |
| !! | GTTGTTTTCGTAAGTTATTC+TGG | + | tig0009225:46069-46088 | Msa1346750:intergenic | 30.0% |
| TATTCATGTAAATAAGGCCT+TGG | + | tig0009225:46366-46385 | Msa1346750:intergenic | 30.0% | |
| ! | ATCCATTATGATTTAAAGCC+TGG | - | tig0009225:46403-46422 | Msa1346750:intron | 30.0% |
| !! | TTCCAGGCTTTAAATCATAA+TGG | + | tig0009225:46408-46427 | Msa1346750:intergenic | 30.0% |
| TCATCAAACAAAACATTTCC+AGG | + | tig0009225:46424-46443 | Msa1346750:intergenic | 30.0% | |
| !!! | AATGTTTTGTTTGATGAGCT+CGG | - | tig0009225:46427-46446 | Msa1346750:intron | 30.0% |
| AATGAAAGAAAGGCAAAAAG+AGG | + | tig0009225:46645-46664 | Msa1346750:intergenic | 30.0% | |
| !!! | TTTTTTAAGTCGTGAATGCA+TGG | - | tig0009225:46745-46764 | Msa1346750:intron | 30.0% |
| ! | TCTCAATTTGTCAGTCATTT+TGG | - | tig0009225:46789-46808 | Msa1346750:intron | 30.0% |
| TAACATAAGTTTCGTGATGT+CGG | - | tig0009225:46830-46849 | Msa1346750:intron | 30.0% | |
| TCGTGAAGACACAATTATTA+AGG | - | tig0009225:47018-47037 | Msa1346750:intron | 30.0% | |
| GCAATCATATAACCTAAAAG+AGG | + | tig0009225:47197-47216 | Msa1346750:intergenic | 30.0% | |
| GACATTCAGATAAATTGTCA+AGG | + | tig0009225:47259-47278 | Msa1346750:intergenic | 30.0% | |
| ATAATCTCAACTGTTGAAGA+AGG | - | tig0009225:47501-47520 | Msa1346750:CDS | 30.0% | |
| ATTTCATCTACAAATTTGCC+AGG | - | tig0009225:47688-47707 | Msa1346750:intron | 30.0% | |
| AGAATTTGTATAGGCTGTTA+AGG | - | tig0009225:47897-47916 | Msa1346750:five_prime_UTR | 30.0% | |
| TTTCTTATCTCAAATGAGTG+AGG | - | tig0009225:47921-47940 | Msa1346750:five_prime_UTR | 30.0% | |
| TTCTTATCTCAAATGAGTGA+GGG | - | tig0009225:47922-47941 | Msa1346750:five_prime_UTR | 30.0% | |
| ! | AGGATTTTTCCCATTCTAAA+AGG | - | tig0009225:47947-47966 | Msa1346750:five_prime_UTR | 30.0% |
| TATTCTTGCCACCAAATTAT+TGG | - | tig0009225:48106-48125 | Msa1346750:five_prime_UTR | 30.0% | |
| CAAATGAAAAGAAAATGCAG+CGG | + | tig0009225:48150-48169 | Msa1346750:intergenic | 30.0% | |
| ! | CTGCATTTTCTTTTCATTTG+TGG | - | tig0009225:48150-48169 | Msa1346750:five_prime_UTR | 30.0% |
| GCAAAACAAGGAAGTAATAG+AGG | + | tig0009225:38928-38947 | Msa0421430:intergenic | 35.0% | |
| ! | TGAAGCATCATTGCAAAACA+AGG | + | tig0009225:38940-38959 | Msa0421430:intergenic | 35.0% |
| GACCCACGTAAAGAAAATTA+GGG | + | tig0009225:39230-39249 | Msa1346750:intergenic | 35.0% | |
| ATTCGTGATCAAAGAGGAAA+AGG | + | tig0009225:39268-39287 | Msa1346750:intergenic | 35.0% | |
| ! | TTTTCCTCTTTGATCACGAA+TGG | - | tig0009225:39267-39286 | Msa1346750:exon | 35.0% |
| TTTCCTCTTTGATCACGAAT+GGG | - | tig0009225:39268-39287 | Msa1346750:exon | 35.0% | |
| ! | CAAAAGGGTTGAATTTTACG+AGG | - | tig0009225:39349-39368 | Msa1346750:CDS | 35.0% |
| AGTTACAGAAGCAACAATGT+CGG | - | tig0009225:39429-39448 | Msa1346750:intron | 35.0% | |
| !! | TTCAATGCTGATTTAGTAGC+AGG | - | tig0009225:39767-39786 | Msa1346750:intron | 35.0% |
| GTGTACAGTGTACATTTATG+AGG | - | tig0009225:40086-40105 | Msa1346750:CDS | 35.0% | |
| GCTTATTTGCTTGTAGTGAT+TGG | - | tig0009225:40130-40149 | Msa1346750:CDS | 35.0% | |
| TTATCGAGTAAATAGCCATC+TGG | - | tig0009225:40193-40212 | Msa1346750:intron | 35.0% | |
| TATCGAGTAAATAGCCATCT+GGG | - | tig0009225:40194-40213 | Msa1346750:intron | 35.0% | |
| AACAACTTTCGACCTATTCA+TGG | + | tig0009225:40221-40240 | Msa1346750:intergenic | 35.0% | |
| CCCCAAATATATCTTTCGTT+AGG | - | tig0009225:40282-40301 | Msa1346750:intron | 35.0% | |
| CGCCTAACGAAAGATATATT+TGG | + | tig0009225:40287-40306 | Msa1346750:intergenic | 35.0% | |
| !!! | CCCGATTTTAGTTTTAGATG+GGG | + | tig0009225:40562-40581 | Msa1346750:intergenic | 35.0% |
| ! | CCCCATCTAAAACTAAAATC+GGG | - | tig0009225:40559-40578 | Msa1346750:intron | 35.0% |
| !!! | GACCCGATTTTAGTTTTAGA+TGG | + | tig0009225:40564-40583 | Msa1346750:intergenic | 35.0% |
| ! | TTTTTCCGTTATGGATTTCC+TGG | - | tig0009225:40727-40746 | Msa1346750:intron | 35.0% |
| ATGTTCCAGGAAATCCATAA+CGG | + | tig0009225:40735-40754 | Msa1346750:intergenic | 35.0% | |
| CCAAACCTTGCAGATAAAAA+GGG | + | tig0009225:40841-40860 | Msa1346750:intergenic | 35.0% | |
| ACCAAACCTTGCAGATAAAA+AGG | + | tig0009225:40842-40861 | Msa1346750:intergenic | 35.0% | |
| ! | TTTTTATCTGCAAGGTTTGG+TGG | - | tig0009225:40841-40860 | Msa1346750:intron | 35.0% |
| ! | GGGATTTTCAAATCTGATTG+TGG | - | tig0009225:40913-40932 | Msa1346750:intron | 35.0% |
| ATACATTCAAACGAAGATGG+TGG | + | tig0009225:41027-41046 | Msa1346750:intergenic | 35.0% | |
| TAAAACGTCCAACACATTCA+TGG | + | tig0009225:41487-41506 | Msa1346750:intergenic | 35.0% | |
| CCCCAAATATATCTTTCGTT+TGG | - | tig0009225:40282-40301 | Msa1346750:intron | 35.0% | |
| CGCCAAACGAAAGATATATT+TGG | + | tig0009225:41547-41566 | Msa1346750:intergenic | 35.0% | |
| ACAAACAAAAGACACGTTTG+AGG | + | tig0009225:41577-41596 | Msa1346750:intergenic | 35.0% | |
| ! | CAAAGAGTAAACGGTCATTT+TGG | + | tig0009225:41716-41735 | Msa1346750:intergenic | 35.0% |
| TCAGATAAATTGCTTGTGCT+TGG | - | tig0009225:42098-42117 | Msa1346750:intron | 35.0% | |
| ! | CTATATCAGGTTGTTACTGA+AGG | - | tig0009225:42251-42270 | Msa1346750:intron | 35.0% |
| TGAAGGAAGACAAACTAGTT+TGG | - | tig0009225:42268-42287 | Msa1346750:intron | 35.0% | |
| AATAGAAAGAAATCTGGTCG+TGG | - | tig0009225:42314-42333 | Msa1346750:intron | 35.0% | |
| TCTGGTCTGATCATTAGATT+TGG | + | tig0009225:42375-42394 | Msa1346750:intergenic | 35.0% | |
| AGTTCTGTAACGAACAATCA+AGG | + | tig0009225:42529-42548 | Msa1346750:intergenic | 35.0% | |
| GATCCGTTTCGTAATGATAA+TGG | - | tig0009225:42581-42600 | Msa1346750:intron | 35.0% | |
| GCACCATTATCATTACGAAA+CGG | + | tig0009225:42587-42606 | Msa1346750:intergenic | 35.0% | |
| !! | TGATAATGGTGCTTCATTAG+AGG | - | tig0009225:42595-42614 | Msa1346750:intron | 35.0% |
| ! | AGTTCTACGTGCAAGTTTTA+AGG | - | tig0009225:42640-42659 | Msa1346750:intron | 35.0% |
| ATTGAGATATGTTGGGGAAA+GGG | + | tig0009225:42732-42751 | Msa1346750:intergenic | 35.0% | |
| GCAATGTCATTGAGATATGT+TGG | + | tig0009225:42740-42759 | Msa1346750:intergenic | 35.0% | |
| TATCTGTCCACAGTTAGAAA+AGG | - | tig0009225:42913-42932 | Msa1346750:intron | 35.0% | |
| TTCACATCTCTTGTTGCAAT+AGG | + | tig0009225:42954-42973 | Msa1346750:intergenic | 35.0% | |
| AACAAGAGATGTGAATCAGA+AGG | - | tig0009225:42959-42978 | Msa1346750:intron | 35.0% | |
| ! | TTTCTTATAGAAGGTGCAAC+TGG | - | tig0009225:43216-43235 | Msa1346750:CDS | 35.0% |
| ! | TTCTTATAGAAGGTGCAACT+GGG | - | tig0009225:43217-43236 | Msa1346750:CDS | 35.0% |
| ! | ATTTTTGTCAGGTCGTACAA+CGG | + | tig0009225:43277-43296 | Msa1346750:intergenic | 35.0% |
| GCAGTTTGAATAACACAGTT+CGG | + | tig0009225:43313-43332 | Msa1346750:intergenic | 35.0% | |
| !! | TGTTTGATTTTGGCACATGT+AGG | - | tig0009225:43477-43496 | Msa1346750:intron | 35.0% |
| GAAGGAATTGAAAGATCTTG+AGG | - | tig0009225:43504-43523 | Msa1346750:intron | 35.0% | |
| TCTCTACAAAATTCAAGGAC+TGG | + | tig0009225:43800-43819 | Msa1346750:intergenic | 35.0% | |
| ATGTTGGTGTAATCAGGTAT+AGG | - | tig0009225:43914-43933 | Msa1346750:intron | 35.0% | |
| AGAGGTTAGACATACAAGTT+GGG | + | tig0009225:44074-44093 | Msa1346750:intergenic | 35.0% | |
| AAGAGGTTAGACATACAAGT+TGG | + | tig0009225:44075-44094 | Msa1346750:intergenic | 35.0% | |
| TGAAGAAATTGTCCCAAAGA+GGG | + | tig0009225:44172-44191 | Msa1346750:intergenic | 35.0% | |
| ATGAAGAAATTGTCCCAAAG+AGG | + | tig0009225:44173-44192 | Msa1346750:intergenic | 35.0% | |
| AGAATCCAAGATCCTAATTG+AGG | + | tig0009225:44427-44446 | Msa1346750:intergenic | 35.0% | |
| ! | TACTATTAGGCATTAGCTTG+TGG | - | tig0009225:44547-44566 | Msa1346750:intron | 35.0% |
| CAAACTACTGATAGATGCAA+TGG | + | tig0009225:44632-44651 | Msa1346750:intergenic | 35.0% | |
| GAAACAACTACTCGAAACAA+AGG | - | tig0009225:44694-44713 | Msa1346750:CDS | 35.0% | |
| !! | TTTTCTTGAATAACTTGCGC+TGG | + | tig0009225:44733-44752 | Msa1346750:intergenic | 35.0% |
| ACAGAAAAAAGGAAACTGAG+TGG | + | tig0009225:44768-44787 | Msa1346750:intergenic | 35.0% | |
| TGGTACAAACTACGAATGAA+GGG | + | tig0009225:44875-44894 | Msa1346750:intergenic | 35.0% | |
| TTGGTACAAACTACGAATGA+AGG | + | tig0009225:44876-44895 | Msa1346750:intergenic | 35.0% | |
| CATGAATATGCTCCTTAAGA+TGG | - | tig0009225:45015-45034 | Msa1346750:intron | 35.0% | |
| !! | TGTATCGATTAGCCATCTTA+AGG | + | tig0009225:45030-45049 | Msa1346750:intergenic | 35.0% |
| TTATCTTCAGGCATGGAAAA+GGG | + | tig0009225:45148-45167 | Msa1346750:intergenic | 35.0% | |
| ! | TTTTCCATGCCTGAAGATAA+GGG | - | tig0009225:45148-45167 | Msa1346750:intron | 35.0% |
| ! | CAGTCAGTAGAAGTATAAAG+AGG | + | tig0009225:45293-45312 | Msa1346750:intergenic | 35.0% |
| !! | CTACTGACTGAACAATTTTC+AGG | - | tig0009225:45303-45322 | Msa1346750:intron | 35.0% |
| !! | AAGAAATTGTTTTGCGAGAG+AGG | - | tig0009225:45329-45348 | Msa1346750:intron | 35.0% |
| !! | AGAAATTGTTTTGCGAGAGA+GGG | - | tig0009225:45330-45349 | Msa1346750:intron | 35.0% |
| TTCGTGAAATGAAACGCATT+CGG | - | tig0009225:45383-45402 | Msa1346750:intron | 35.0% | |
| CTTTCCAAGAAGGTTTAGAA+GGG | + | tig0009225:45461-45480 | Msa1346750:intergenic | 35.0% | |
| CTTCTAAACCTTCTTGGAAA+GGG | - | tig0009225:45460-45479 | Msa1346750:intron | 35.0% | |
| ! | AGAGTTCCTTTGCCTTTTAT+TGG | - | tig0009225:45601-45620 | Msa1346750:intron | 35.0% |
| CATTTGCCAATAAAAGGCAA+AGG | + | tig0009225:45610-45629 | Msa1346750:intergenic | 35.0% | |
| GTTACATAAGGCATGCAATT+CGG | - | tig0009225:45760-45779 | Msa1346750:intron | 35.0% | |
| TTACATAAGGCATGCAATTC+GGG | - | tig0009225:45761-45780 | Msa1346750:intron | 35.0% | |
| AGAACAGTGCAGAATGTATT+TGG | + | tig0009225:45855-45874 | Msa1346750:intergenic | 35.0% | |
| ! | AAGTTATTCTGGAGAGCTTA+TGG | + | tig0009225:46058-46077 | Msa1346750:intergenic | 35.0% |
| !! | ATTGCCAAAGTGACTGATTT+TGG | - | tig0009225:46451-46470 | Msa1346750:intron | 35.0% |
| AAGACCAAAATCAGTCACTT+TGG | + | tig0009225:46458-46477 | Msa1346750:intergenic | 35.0% | |
| !!! | TTTTGGTCTTAGCAAGATTG+TGG | - | tig0009225:46468-46487 | Msa1346750:intron | 35.0% |
| AAGATTGTGGAGAATGATGT+GGG | - | tig0009225:46481-46500 | Msa1346750:intron | 35.0% | |
| GTGATGAAGATCATTGTTGT+AGG | - | tig0009225:46553-46572 | Msa1346750:intron | 35.0% | |
| TTGAAGTGATCCAAACTTGT+TGG | - | tig0009225:46586-46605 | Msa1346750:intron | 35.0% | |
| ATGACCTTGGATGATATAAG+AGG | + | tig0009225:46717-46736 | Msa1346750:intergenic | 35.0% | |
| !! | TTGTCAGTCATTTTGGTCAA+TGG | - | tig0009225:46796-46815 | Msa1346750:intron | 35.0% |
| TTGTGCAAACAACTAAGTGT+TGG | - | tig0009225:46855-46874 | Msa1346750:intron | 35.0% | |
| ! | CACATAACATTTCTGACTTG+TGG | - | tig0009225:46899-46918 | Msa1346750:intron | 35.0% |
| ! | ATTTCTGACTTGTGGAAAAC+AGG | - | tig0009225:46907-46926 | Msa1346750:intron | 35.0% |
| ! | GAAGTATTCTCTCTTGTGTT+TGG | + | tig0009225:47000-47019 | Msa1346750:intergenic | 35.0% |
| TTAGAAACAGTAGGTCTTGA+GGG | + | tig0009225:47061-47080 | Msa1346750:intergenic | 35.0% | |
| ATTAGAAACAGTAGGTCTTG+AGG | + | tig0009225:47062-47081 | Msa1346750:intergenic | 35.0% | |
| !! | AAGACCTACTGTTTCTAATG+AGG | - | tig0009225:47063-47082 | Msa1346750:intron | 35.0% |
| TTTGCCTCATTAGAAACAGT+AGG | + | tig0009225:47070-47089 | Msa1346750:intergenic | 35.0% | |
| !! | TACTGTTTCTAATGAGGCAA+AGG | - | tig0009225:47069-47088 | Msa1346750:intron | 35.0% |
| CGGGTAGTACTTATCATAAA+AGG | + | tig0009225:47105-47124 | Msa1346750:intergenic | 35.0% | |
| ! | ACACAATCTTCACCTCTTTT+AGG | - | tig0009225:47182-47201 | Msa1346750:intron | 35.0% |
| ! | TTGCAGCAATGAGAAAGTAT+TGG | - | tig0009225:47346-47365 | Msa1346750:intron | 35.0% |
| ! | GGAGTGTTATTCAGAGAAAA+CGG | + | tig0009225:47591-47610 | Msa1346750:intergenic | 35.0% |
| GATGAAATAGAGATATCGTC+AGG | + | tig0009225:47676-47695 | Msa1346750:intergenic | 35.0% | |
| GTATGTGAGATATGGATCTT+GGG | + | tig0009225:47774-47793 | Msa1346750:intergenic | 35.0% | |
| TTCTTCACGTATGTGAGATA+TGG | + | tig0009225:47782-47801 | Msa1346750:intergenic | 35.0% | |
| AGTAGTGATGTTCATTGACA+TGG | - | tig0009225:47801-47820 | Msa1346750:five_prime_UTR | 35.0% | |
| TATACATCATTGACCCTTCA+AGG | + | tig0009225:48049-48068 | Msa1346750:intergenic | 35.0% | |
| TTGAAGGGTCAATGATGTAT+AGG | - | tig0009225:48048-48067 | Msa1346750:five_prime_UTR | 35.0% | |
| ! | AGTGGTGGAATCAAAAGCTT+GGG | + | tig0009225:39002-39021 | Msa0421430:intergenic | 40.0% |
| !! | AGTCTAGGGTTTGTTAAGAG+TGG | + | tig0009225:39020-39039 | Msa0421430:intergenic | 40.0% |
| CGACCCACGTAAAGAAAATT+AGG | + | tig0009225:39231-39250 | Msa1346750:intergenic | 40.0% | |
| TTACCCATTCGTGATCAAAG+AGG | + | tig0009225:39274-39293 | Msa1346750:intergenic | 40.0% | |
| GTCGAATTCTTCGAACCAAT+CGG | - | tig0009225:39474-39493 | Msa1346750:intron | 40.0% | |
| TCCAACTTGGCAATCTTTGT+AGG | + | tig0009225:39511-39530 | Msa1346750:intergenic | 40.0% | |
| TTCCCAGAAGAAGAAACAGA+AGG | + | tig0009225:39586-39605 | Msa1346750:intergenic | 40.0% | |
| ! | TCTTCTTCTGGGAAATTCAG+TGG | - | tig0009225:39592-39611 | Msa1346750:intron | 40.0% |
| TCAGAATCACTTGAACTGCA+AGG | + | tig0009225:39643-39662 | Msa1346750:intergenic | 40.0% | |
| ATCTGGGTTCTTGAATGTGT+CGG | - | tig0009225:39830-39849 | Msa1346750:intron | 40.0% | |
| !! | TCATAGTGGACAACATCTCA+AGG | + | tig0009225:40349-40368 | Msa1346750:intergenic | 40.0% |
| TACGTATTCGAGCTTCATAG+TGG | + | tig0009225:40363-40382 | Msa1346750:intergenic | 40.0% | |
| TGAAGCTCGAATACGTAATG+CGG | - | tig0009225:40366-40385 | Msa1346750:CDS | 40.0% | |
| ATTCAGTCCCTCATACTACA+AGG | - | tig0009225:40789-40808 | Msa1346750:intron | 40.0% | |
| ! | CCCTTTTTATCTGCAAGGTT+TGG | - | tig0009225:40838-40857 | Msa1346750:intron | 40.0% |
| ! | AGTCATTTGGGTTCTGATTG+TGG | - | tig0009225:40989-41008 | Msa1346750:intron | 40.0% |
| TACGTATTCGAGCTTCATAG+TGG | + | tig0009225:40363-40382 | Msa1346750:intergenic | 40.0% | |
| ! | ATCCCTTTTTATCTGCGAGA+TGG | - | tig0009225:41281-41300 | Msa1346750:intron | 40.0% |
| ! | TCCCTTTTTATCTGCGAGAT+GGG | - | tig0009225:41282-41301 | Msa1346750:intron | 40.0% |
| ACCCATCTCGCAGATAAAAA+GGG | + | tig0009225:41286-41305 | Msa1346750:intergenic | 40.0% | |
| AACCCATCTCGCAGATAAAA+AGG | + | tig0009225:41287-41306 | Msa1346750:intergenic | 40.0% | |
| !! | TTTTATCTGCGAGATGGGTT+TGG | - | tig0009225:41287-41306 | Msa1346750:intron | 40.0% |
| AGTCAAGGACTTTAGCGATA+CGG | - | tig0009225:41673-41692 | Msa1346750:CDS | 40.0% | |
| ! | GGTCGAATGTGTTCTTTTGA+TGG | - | tig0009225:41857-41876 | Msa1346750:CDS | 40.0% |
| CTTTCTATTCCAGAATGGTG+CGG | - | tig0009225:41914-41933 | Msa1346750:intron | 40.0% | |
| ! | TTTTAAGCGCTTACGTGTGT+TGG | + | tig0009225:41955-41974 | Msa1346750:intergenic | 40.0% |
| ACATCATCGTTATCATCGTG+AGG | + | tig0009225:41978-41997 | Msa1346750:intergenic | 40.0% | |
| !! | TGATGTTTTTGAACGTGCTG+AGG | - | tig0009225:41992-42011 | Msa1346750:intron | 40.0% |
| GCCGTGTCTCATTGAAAATA+CGG | - | tig0009225:42068-42087 | Msa1346750:intron | 40.0% | |
| ! | GCCGTATTTTCAATGAGACA+CGG | + | tig0009225:42072-42091 | Msa1346750:intergenic | 40.0% |
| AGTGGTACTCTGTCTCAATT+TGG | - | tig0009225:42191-42210 | Msa1346750:intron | 40.0% | |
| TCAACAGTTTCGGCTTCAAA+TGG | - | tig0009225:42410-42429 | Msa1346750:intron | 40.0% | |
| CATTGAGATATGTTGGGGAA+AGG | + | tig0009225:42733-42752 | Msa1346750:intergenic | 40.0% | |
| ACGTGCAAAAGTTGTTGTGT+TGG | - | tig0009225:42844-42863 | Msa1346750:intron | 40.0% | |
| TGCAAAAGTTGTTGTGTTGG+AGG | - | tig0009225:42847-42866 | Msa1346750:intron | 40.0% | |
| ACAGATATTCTGATGCTGAG+AGG | + | tig0009225:42900-42919 | Msa1346750:intergenic | 40.0% | |
| GTTGTACGACCTGACAAAAA+TGG | - | tig0009225:43276-43295 | Msa1346750:intron | 40.0% | |
| !!! | GTTTCACTGCCATTTTTGTC+AGG | + | tig0009225:43288-43307 | Msa1346750:intergenic | 40.0% |
| TGAGGAGCAAATGAAACCTA+AGG | - | tig0009225:43522-43541 | Msa1346750:intron | 40.0% | |
| ! | TTTTGTGCCTTGAGAGAATC+GGG | + | tig0009225:43589-43608 | Msa1346750:intergenic | 40.0% |
| ! | GTTTTGTGCCTTGAGAGAAT+CGG | + | tig0009225:43590-43609 | Msa1346750:intergenic | 40.0% |
| AGGACTGGATGTTAATATGC+CGG | + | tig0009225:43785-43804 | Msa1346750:intergenic | 40.0% | |
| ! | AGCAAGACTAAAAGTACGAC+AGG | - | tig0009225:43873-43892 | Msa1346750:intron | 40.0% |
| TCATTGAGACTCGGAAATGT+TGG | - | tig0009225:43898-43917 | Msa1346750:intron | 40.0% | |
| TCGGAAATGTTGGTGTAATC+AGG | - | tig0009225:43908-43927 | Msa1346750:intron | 40.0% | |
| AACTGTCTTAACTGAGACCT+GGG | - | tig0009225:44018-44037 | Msa1346750:intron | 40.0% | |
| GTAGATGTCTTACCCTCTTT+GGG | - | tig0009225:44157-44176 | Msa1346750:CDS | 40.0% | |
| !!! | TGGTTTTATGGGCCTCAATT+AGG | - | tig0009225:44412-44431 | Msa1346750:intron | 40.0% |
| GTACTGAAAAGGAAAACAGG+TGG | + | tig0009225:44530-44549 | Msa1346750:intergenic | 40.0% | |
| ACAACTACTCGAAACAAAGG+AGG | - | tig0009225:44697-44716 | Msa1346750:CDS | 40.0% | |
| AACACTTGTCTTCCTGAACT+TGG | - | tig0009225:44789-44808 | Msa1346750:CDS | 40.0% | |
| ACACTTGTCTTCCTGAACTT+GGG | - | tig0009225:44790-44809 | Msa1346750:CDS | 40.0% | |
| AGGAAAAGGAAAAGCGGAAA+AGG | + | tig0009225:44850-44869 | Msa1346750:intergenic | 40.0% | |
| AGGGAAAGGAAAAGGAAAAG+CGG | + | tig0009225:44856-44875 | Msa1346750:intergenic | 40.0% | |
| ACGAATGAAGGGAAAGGAAA+AGG | + | tig0009225:44864-44883 | Msa1346750:intergenic | 40.0% | |
| CAAACTACGAATGAAGGGAA+AGG | + | tig0009225:44870-44889 | Msa1346750:intergenic | 40.0% | |
| CTTATCTTCAGGCATGGAAA+AGG | + | tig0009225:45149-45168 | Msa1346750:intergenic | 40.0% | |
| ! | CTTTTCCATGCCTGAAGATA+AGG | - | tig0009225:45147-45166 | Msa1346750:intron | 40.0% |
| ATTCCATCACCCTTATCTTC+AGG | + | tig0009225:45160-45179 | Msa1346750:intergenic | 40.0% | |
| GGAAGATATTCTCATTCACG+AGG | - | tig0009225:45201-45220 | Msa1346750:intron | 40.0% | |
| TCGTGAAATGAAACGCATTC+GGG | - | tig0009225:45384-45403 | Msa1346750:intron | 40.0% | |
| CCTTTCCAAGAAGGTTTAGA+AGG | + | tig0009225:45462-45481 | Msa1346750:intergenic | 40.0% | |
| CCTTCTAAACCTTCTTGGAA+AGG | - | tig0009225:45459-45478 | Msa1346750:intron | 40.0% | |
| !! | AAAGGAACTCTCTAGGATTC+TGG | + | tig0009225:45592-45611 | Msa1346750:intergenic | 40.0% |
| AAAAGGCAAAGGAACTCTCT+AGG | + | tig0009225:45599-45618 | Msa1346750:intergenic | 40.0% | |
| !! | TTTCCAGCAGGCTTTTGATT+TGG | - | tig0009225:45668-45687 | Msa1346750:intron | 40.0% |
| TATGTTGCATGCAAGCTTCA+TGG | - | tig0009225:45702-45721 | Msa1346750:intron | 40.0% | |
| AACAATATGACGATGGACCA+AGG | + | tig0009225:45805-45824 | Msa1346750:intergenic | 40.0% | |
| !! | ACTGTTCTAGAGTATTGCAG+CGG | - | tig0009225:45867-45886 | Msa1346750:intron | 40.0% |
| TGATAGACTATGGGTCTGTT+TGG | - | tig0009225:45939-45958 | Msa1346750:intron | 40.0% | |
| GAGAGCTTATGGAAATAAGC+TGG | + | tig0009225:46047-46066 | Msa1346750:intergenic | 40.0% | |
| AACAGAGGAGGATCAAATGA+AGG | + | tig0009225:46257-46276 | Msa1346750:intergenic | 40.0% | |
| AACACCTATATTGCCTGAGA+AGG | - | tig0009225:46312-46331 | Msa1346750:intron | 40.0% | |
| CAAGATTGTGGAGAATGATG+TGG | - | tig0009225:46480-46499 | Msa1346750:intron | 40.0% | |
| GTTTCTAATGAGGCAAAGGT+AGG | - | tig0009225:47073-47092 | Msa1346750:intron | 40.0% | |
| ACCCGTAGCTAATTGTTCTT+TGG | - | tig0009225:47120-47139 | Msa1346750:intron | 40.0% | |
| GCCAAAGAACAATTAGCTAC+GGG | + | tig0009225:47124-47143 | Msa1346750:intergenic | 40.0% | |
| GGCCAAAGAACAATTAGCTA+CGG | + | tig0009225:47125-47144 | Msa1346750:intergenic | 40.0% | |
| TCCGACTTTATTCTATGTGC+AGG | - | tig0009225:47224-47243 | Msa1346750:intron | 40.0% | |
| GCCTGCACATAGAATAAAGT+CGG | + | tig0009225:47228-47247 | Msa1346750:intergenic | 40.0% | |
| GAATGTCCAAATTCTCTCCT+CGG | - | tig0009225:47272-47291 | Msa1346750:intron | 40.0% | |
| TAACACTCCTCACAGTTTAG+AGG | - | tig0009225:47602-47621 | Msa1346750:CDS | 40.0% | |
| ! | TTTGGTTCCTCTAAACTGTG+AGG | + | tig0009225:47612-47631 | Msa1346750:intergenic | 40.0% |
| TTTGCCAGGAATTTATACGG+CGG | - | tig0009225:47702-47721 | Msa1346750:intron | 40.0% | |
| CGTATGTGAGATATGGATCT+TGG | + | tig0009225:47775-47794 | Msa1346750:intergenic | 40.0% | |
| !!! | ATGCTTTTTTGGTGGGGAAA+GGG | + | tig0009225:47835-47854 | Msa1346750:intergenic | 40.0% |
| !!! | TATGCTTTTTTGGTGGGGAA+AGG | + | tig0009225:47836-47855 | Msa1346750:intergenic | 40.0% |
| ! | TTCCCCACCAAAAAAGCATA+TGG | - | tig0009225:47836-47855 | Msa1346750:five_prime_UTR | 40.0% |
| ! | TCCCCACCAAAAAAGCATAT+GGG | - | tig0009225:47837-47856 | Msa1346750:five_prime_UTR | 40.0% |
| !!! | TCCCCATATGCTTTTTTGGT+GGG | + | tig0009225:47842-47861 | Msa1346750:intergenic | 40.0% |
| !!! | ATCCCCATATGCTTTTTTGG+TGG | + | tig0009225:47843-47862 | Msa1346750:intergenic | 40.0% |
| !!! | GAGATCCCCATATGCTTTTT+TGG | + | tig0009225:47846-47865 | Msa1346750:intergenic | 40.0% |
| ATCTCAAATGAGTGAGGGAA+AGG | - | tig0009225:47927-47946 | Msa1346750:five_prime_UTR | 40.0% | |
| !!! | CAACTAGCTTTTTGCTACTC+CGG | + | tig0009225:48015-48034 | Msa1346750:intergenic | 40.0% |
| !! | TTGAGTTGACTTGACCTTGA+AGG | - | tig0009225:48032-48051 | Msa1346750:five_prime_UTR | 40.0% |
| !! | TGAGTTGACTTGACCTTGAA+GGG | - | tig0009225:48033-48052 | Msa1346750:five_prime_UTR | 40.0% |
| AGGGTCAATGATGTATAGGT+AGG | - | tig0009225:48052-48071 | Msa1346750:five_prime_UTR | 40.0% | |
| GTGGAATCAAAAGCTTGGGA+GGG | + | tig0009225:38998-39017 | Msa0421430:intergenic | 45.0% | |
| ! | GAGTGGTGGAATCAAAAGCT+TGG | + | tig0009225:39003-39022 | Msa0421430:intergenic | 45.0% |
| !! | CTAGGGTTTGTTAAGAGTGG+TGG | + | tig0009225:39017-39036 | Msa0421430:intergenic | 45.0% |
| AGAGAGAGAGAGAGAGTCTA+GGG | + | tig0009225:39034-39053 | Msa0421430:intergenic | 45.0% | |
| ! | TGGGTGTGTTGATGTTGTGA+AGG | + | tig0009225:39136-39155 | Msa0421430:intergenic | 45.0% |
| GCCTACAAAGATTGCCAAGT+TGG | - | tig0009225:39507-39526 | Msa1346750:intron | 45.0% | |
| AAGTTGGAAGCTCGAATGGT+GGG | - | tig0009225:39523-39542 | Msa1346750:intron | 45.0% | |
| TCAACTGCTTCTCAGCAACA+AGG | - | tig0009225:39556-39575 | Msa1346750:intron | 45.0% | |
| ! | TGGCCTTCTGTTTCTTCTTC+TGG | - | tig0009225:39580-39599 | Msa1346750:intron | 45.0% |
| ! | GGCCTTCTGTTTCTTCTTCT+GGG | - | tig0009225:39581-39600 | Msa1346750:intron | 45.0% |
| TGGAGTAGCAGCTGAAGAAA+TGG | - | tig0009225:39612-39631 | Msa1346750:intron | 45.0% | |
| TCTGGGTTCTTGAATGTGTC+GGG | - | tig0009225:39831-39850 | Msa1346750:intron | 45.0% | |
| CACAGTGGACAACACATTCA+AGG | + | tig0009225:39962-39981 | Msa1346750:intergenic | 45.0% | |
| CACTGTGAAGCTCGAATATG+CGG | - | tig0009225:39975-39994 | Msa1346750:intron | 45.0% | |
| ACTGTGAAGCTCGAATATGC+GGG | - | tig0009225:39976-39995 | Msa1346750:intron | 45.0% | |
| GAAGCTCGAATACGTAATGC+GGG | - | tig0009225:40367-40386 | Msa1346750:CDS | 45.0% | |
| AGGGTGACCTTGTAGTATGA+GGG | + | tig0009225:40799-40818 | Msa1346750:intergenic | 45.0% | |
| TAGGGTGACCTTGTAGTATG+AGG | + | tig0009225:40800-40819 | Msa1346750:intergenic | 45.0% | |
| !! | TGCAAGGTTTGGTGGTTTGA+GGG | - | tig0009225:40849-40868 | Msa1346750:intron | 45.0% |
| !! | CATAGTGGACAGCACATTCA+AGG | + | tig0009225:41131-41150 | Msa1346750:intergenic | 45.0% |
| TGAAGCTCGAATACGTAGTG+CGG | - | tig0009225:41149-41168 | Msa1346750:intron | 45.0% | |
| AACACATTCATGGACCCAGA+TGG | + | tig0009225:41477-41496 | Msa1346750:intergenic | 45.0% | |
| ATCTGGGTCCATGAATGTGT+TGG | - | tig0009225:41476-41495 | Msa1346750:intron | 45.0% | |
| GTGTCTCGACTCTCGATTAA+TGG | + | tig0009225:41624-41643 | Msa1346750:intergenic | 45.0% | |
| CGAGAGTCGAGACACATTTA+TGG | - | tig0009225:41629-41648 | Msa1346750:CDS | 45.0% | |
| TCAAGAAATCCGCACCATTC+TGG | + | tig0009225:41926-41945 | Msa1346750:intergenic | 45.0% | |
| AAGAAATCTGGTCGTGGAAG+AGG | - | tig0009225:42320-42339 | Msa1346750:intron | 45.0% | |
| AGAAATCTGGTCGTGGAAGA+GGG | - | tig0009225:42321-42340 | Msa1346750:intron | 45.0% | |
| AAGGCAAGTAGAAGAATGGG+TGG | - | tig0009225:42659-42678 | Msa1346750:intron | 45.0% | |
| ! | GTCGTACAACGGATTTGGTT+TGG | + | tig0009225:43266-43285 | Msa1346750:intergenic | 45.0% |
| TTGGCACATGTAGGAACTGA+AGG | - | tig0009225:43486-43505 | Msa1346750:intron | 45.0% | |
| TTTCCTTCCCGATTCTCTCA+AGG | - | tig0009225:43579-43598 | Msa1346750:intron | 45.0% | |
| GAACTGTCTTAACTGAGACC+TGG | - | tig0009225:44017-44036 | Msa1346750:intron | 45.0% | |
| TTAACTGAGACCTGGGAAGA+TGG | - | tig0009225:44025-44044 | Msa1346750:intron | 45.0% | |
| CGTAGATGTCTTACCCTCTT+TGG | - | tig0009225:44156-44175 | Msa1346750:CDS | 45.0% | |
| ATGGGCCTCAATTAGGATCT+TGG | - | tig0009225:44419-44438 | Msa1346750:intron | 45.0% | |
| CACTTGTCTTCCTGAACTTG+GGG | - | tig0009225:44791-44810 | Msa1346750:CDS | 45.0% | |
| ATCACCCTTATCTTCAGGCA+TGG | + | tig0009225:45155-45174 | Msa1346750:intergenic | 45.0% | |
| ATGCCTGAAGATAAGGGTGA+TGG | - | tig0009225:45154-45173 | Msa1346750:intron | 45.0% | |
| ! | CTCGACTAGCCAGCATTAAA+CGG | - | tig0009225:45236-45255 | Msa1346750:intron | 45.0% |
| ! | TCGACTAGCCAGCATTAAAC+GGG | - | tig0009225:45237-45256 | Msa1346750:intron | 45.0% |
| GCAACTTACCCGTTTAATGC+TGG | + | tig0009225:45248-45267 | Msa1346750:intergenic | 45.0% | |
| ! | TTCCCTTCTCTAGTTCGTAG+CGG | + | tig0009225:45357-45376 | Msa1346750:intergenic | 45.0% |
| AAACGCATTCGGGATGAAGA+TGG | - | tig0009225:45394-45413 | Msa1346750:intron | 45.0% | |
| TTCGGGATGAAGATGGTTCA+CGG | - | tig0009225:45401-45420 | Msa1346750:intron | 45.0% | |
| TACGCCCTTCTAAACCTTCT+TGG | - | tig0009225:45454-45473 | Msa1346750:intron | 45.0% | |
| CTAAACCTTCTTGGAAAGGG+AGG | - | tig0009225:45463-45482 | Msa1346750:intron | 45.0% | |
| TGAATCCTCCCTTTCCAAGA+AGG | + | tig0009225:45471-45490 | Msa1346750:intergenic | 45.0% | |
| ATCTTTCCCTGGTAGAACAG+AGG | + | tig0009225:46272-46291 | Msa1346750:intergenic | 45.0% | |
| ACAGCATCAAGATCTTTCCC+TGG | + | tig0009225:46283-46302 | Msa1346750:intergenic | 45.0% | |
| ACCTATATTGCCTGAGAAGG+AGG | - | tig0009225:46315-46334 | Msa1346750:intron | 45.0% | |
| GGATGTAAGTTCCATACCCT+GGG | + | tig0009225:46509-46528 | Msa1346750:intergenic | 45.0% | |
| GGTATGGAACTTACATCCCA+GGG | - | tig0009225:46511-46530 | Msa1346750:intron | 45.0% | |
| GTATGGAACTTACATCCCAG+GGG | - | tig0009225:46512-46531 | Msa1346750:intron | 45.0% | |
| TATGGAACTTACATCCCAGG+GGG | - | tig0009225:46513-46532 | Msa1346750:intron | 45.0% | |
| ! | TTGCTGAGCTCAAAGCATTC+AGG | + | tig0009225:46690-46709 | Msa1346750:intergenic | 45.0% |
| GACGCCTCTTATATCATCCA+AGG | - | tig0009225:46710-46729 | Msa1346750:intron | 45.0% | |
| !! | GTGGAAAACAGGTTGATGTC+TGG | - | tig0009225:46918-46937 | Msa1346750:intron | 45.0% |
| TGTGTTTGGTCATGTCCGAA+AGG | + | tig0009225:46986-47005 | Msa1346750:intergenic | 45.0% | |
| CACAATTATTAAGGCGCGCA+AGG | - | tig0009225:47027-47046 | Msa1346750:intron | 45.0% | |
| GTGATACCGAGGAGAGAATT+TGG | + | tig0009225:47281-47300 | Msa1346750:intergenic | 45.0% | |
| ! | TAATGGGCATTGTGATACCG+AGG | + | tig0009225:47292-47311 | Msa1346750:intergenic | 45.0% |
| GCGGTGTCTAACATATAACC+AGG | - | tig0009225:47721-47740 | Msa1346750:intron | 45.0% | |
| TGGGCAATGGTCAATACATC+TGG | + | tig0009225:47755-47774 | Msa1346750:intergenic | 45.0% | |
| GAGATATGGATCTTGGGCAA+TGG | + | tig0009225:47768-47787 | Msa1346750:intergenic | 45.0% | |
| !!! | CCCCATATGCTTTTTTGGTG+GGG | + | tig0009225:47841-47860 | Msa1346750:intergenic | 45.0% |
| ! | CCCCACCAAAAAAGCATATG+GGG | - | tig0009225:47838-47857 | Msa1346750:five_prime_UTR | 45.0% |
| GGTGGAATCAAAAGCTTGGG+AGG | + | tig0009225:38999-39018 | Msa0421430:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGTCT+AGG | + | tig0009225:39035-39054 | Msa0421430:intergenic | 50.0% | |
| TAGGCAGAGACTGATCCGAT+TGG | + | tig0009225:39492-39511 | Msa1346750:intergenic | 50.0% | |
| ! | TGCCAAGTTGGAAGCTCGAA+TGG | - | tig0009225:39519-39538 | Msa1346750:intron | 50.0% |
| CACCATTCGAGCTTCCAACT+TGG | + | tig0009225:39524-39543 | Msa1346750:intergenic | 50.0% | |
| ! | CAAGTTGGAAGCTCGAATGG+TGG | - | tig0009225:39522-39541 | Msa1346750:intron | 50.0% |
| ! | GAAGCTCGAATGGTGGGAAA+AGG | - | tig0009225:39529-39548 | Msa1346750:intron | 50.0% |
| CTGCTTCTCAGCAACAAGGT+TGG | - | tig0009225:39560-39579 | Msa1346750:intron | 50.0% | |
| ! | GCTGATTTAGTAGCAGGCTG+TGG | - | tig0009225:39773-39792 | Msa1346750:intron | 50.0% |
| CGCATATTCGAGCTTCACAG+TGG | + | tig0009225:39977-39996 | Msa1346750:intergenic | 50.0% | |
| TGAAGCTCGAATATGCGGGT+GGG | - | tig0009225:39980-39999 | Msa1346750:intron | 50.0% | |
| AGCCATCTGGGTCCATGAAT+AGG | - | tig0009225:40206-40225 | Msa1346750:intron | 50.0% | |
| GACCTATTCATGGACCCAGA+TGG | + | tig0009225:40211-40230 | Msa1346750:intergenic | 50.0% | |
| CTCGAATACGTAATGCGGGT+GGG | - | tig0009225:40371-40390 | Msa1346750:CDS | 50.0% | |
| TCGAATACGTAATGCGGGTG+GGG | - | tig0009225:40372-40391 | Msa1346750:CDS | 50.0% | |
| !! | CTGCAAGGTTTGGTGGTTTG+AGG | - | tig0009225:40848-40867 | Msa1346750:intron | 50.0% |
| GAAGCTCGAATACGTAGTGC+GGG | - | tig0009225:41150-41169 | Msa1346750:intron | 50.0% | |
| GATACGGTCTCGCTCATTTG+AGG | - | tig0009225:41689-41708 | Msa1346750:CDS | 50.0% | |
| ! | GTCAGGTCGTACAACGGATT+TGG | + | tig0009225:43271-43290 | Msa1346750:intergenic | 50.0% |
| CGACAGGACTCATTGAGACT+CGG | - | tig0009225:43889-43908 | Msa1346750:intron | 50.0% | |
| GGAAGATGGTCAGGCGTTAA+AGG | - | tig0009225:44039-44058 | Msa1346750:intron | 50.0% | |
| TCTTCCTGAACTTGGGGAAG+AGG | - | tig0009225:44797-44816 | Msa1346750:CDS | 50.0% | |
| CTTCCTGAACTTGGGGAAGA+GGG | - | tig0009225:44798-44817 | Msa1346750:CDS | 50.0% | |
| TTCCTGAACTTGGGGAAGAG+GGG | - | tig0009225:44799-44818 | Msa1346750:CDS | 50.0% | |
| !! | GGGTGATGGAATAGATGCAG+AGG | - | tig0009225:45168-45187 | Msa1346750:intron | 50.0% |
| GATGGAATAGATGCAGAGGC+TGG | - | tig0009225:45172-45191 | Msa1346750:intron | 50.0% | |
| GACCGCTACGAACTAGAGAA+GGG | - | tig0009225:45352-45371 | Msa1346750:intron | 50.0% | |
| ! | GGTTTAGAAGGGCGTAACGA+TGG | + | tig0009225:45450-45469 | Msa1346750:intergenic | 50.0% |
| AGGATTCAGCGAGGTGTACA+AGG | - | tig0009225:45483-45502 | Msa1346750:intron | 50.0% | |
| CCACCAAATCAAAAGCCTGC+TGG | + | tig0009225:45674-45693 | Msa1346750:intergenic | 50.0% | |
| !!! | CCAGCAGGCTTTTGATTTGG+TGG | - | tig0009225:45671-45690 | Msa1346750:intron | 50.0% |
| TGATCCTCCTCTGTTCTACC+AGG | - | tig0009225:46262-46281 | Msa1346750:intron | 50.0% | |
| GATCCTCCTCTGTTCTACCA+GGG | - | tig0009225:46263-46282 | Msa1346750:intron | 50.0% | |
| TTTCCCTGGTAGAACAGAGG+AGG | + | tig0009225:46269-46288 | Msa1346750:intergenic | 50.0% | |
| GCCTCCTTCTCAGGCAATAT+AGG | + | tig0009225:46319-46338 | Msa1346750:intergenic | 50.0% | |
| ATGACTCTAGCCTCCTTCTC+AGG | + | tig0009225:46328-46347 | Msa1346750:intergenic | 50.0% | |
| GAGAATGATGTGGGATCCCA+GGG | - | tig0009225:46490-46509 | Msa1346750:intron | 50.0% | |
| GGGATGTAAGTTCCATACCC+TGG | + | tig0009225:46510-46529 | Msa1346750:intergenic | 50.0% | |
| GGGTATGGAACTTACATCCC+AGG | - | tig0009225:46510-46529 | Msa1346750:intron | 50.0% | |
| ! | CTGAGCTCAAAGCATTCAGG+AGG | + | tig0009225:46687-46706 | Msa1346750:intergenic | 50.0% |
| GACACCGCCGTATAAATTCC+TGG | + | tig0009225:47709-47728 | Msa1346750:intergenic | 50.0% | |
| ATACATCTGGTCTCTCAGCC+TGG | + | tig0009225:47742-47761 | Msa1346750:intergenic | 50.0% | |
| GTGAAGCTCGAATATGCGGG+TGG | - | tig0009225:39979-39998 | Msa1346750:intron | 55.0% | |
| GAAGCTCGAATATGCGGGTG+GGG | - | tig0009225:39981-40000 | Msa1346750:intron | 55.0% | |
| GCTCGAATACGTAATGCGGG+TGG | - | tig0009225:40370-40389 | Msa1346750:CDS | 55.0% | |
| CTCGAATACGTAGTGCGGGT+GGG | - | tig0009225:41154-41173 | Msa1346750:intron | 55.0% | |
| TCGAATACGTAGTGCGGGTG+GGG | - | tig0009225:41155-41174 | Msa1346750:intron | 55.0% | |
| !! | GGGAGTTCTGGTTCAAGCAG+AGG | - | tig0009225:42341-42360 | Msa1346750:CDS | 55.0% |
| ! | TCTGGTTCAAGCAGAGGTCG+TGG | - | tig0009225:42347-42366 | Msa1346750:CDS | 55.0% |
| ! | AGAAGGTGCAACTGGGCAGT+TGG | - | tig0009225:43224-43243 | Msa1346750:CDS | 55.0% |
| GTGCCTTGAGAGAATCGGGA+AGG | + | tig0009225:43585-43604 | Msa1346750:intergenic | 55.0% | |
| TGAGACCTGGGAAGATGGTC+AGG | - | tig0009225:44030-44049 | Msa1346750:intron | 55.0% | |
| TAACGCCTGACCATCTTCCC+AGG | + | tig0009225:44038-44057 | Msa1346750:intergenic | 55.0% | |
| AACCCCTCTTCCCCAAGTTC+AGG | + | tig0009225:44804-44823 | Msa1346750:intergenic | 55.0% | |
| CTTGGGGAAGAGGGGTTAAG+TGG | - | tig0009225:44807-44826 | Msa1346750:intron | 55.0% | |
| AGATGCAGAGGCTGGATTGC+TGG | - | tig0009225:45180-45199 | Msa1346750:intron | 55.0% | |
| GGACCGCTACGAACTAGAGA+AGG | - | tig0009225:45351-45370 | Msa1346750:intron | 55.0% | |
| TGGAAAGGGAGGATTCAGCG+AGG | - | tig0009225:45474-45493 | Msa1346750:intron | 55.0% | |
| GGAGAATGATGTGGGATCCC+AGG | - | tig0009225:46489-46508 | Msa1346750:intron | 55.0% | |
| TGATGTGGGATCCCAGGGTA+TGG | - | tig0009225:46495-46514 | Msa1346750:intron | 55.0% | |
| !! | CAGGTTGATGTCTGGTCTGC+TGG | - | tig0009225:46926-46945 | Msa1346750:intron | 55.0% |
| CTCTTCGGCAGACGTCCTTT+CGG | - | tig0009225:46968-46987 | Msa1346750:intron | 55.0% | |
| CTCGAATATGCGGGTGGGGT+GGG | - | tig0009225:39985-40004 | Msa1346750:intron | 60.0% | |
| TCGAATATGCGGGTGGGGTG+GGG | - | tig0009225:39986-40005 | Msa1346750:intron | 60.0% | |
| GCTCGAATACGTAGTGCGGG+TGG | - | tig0009225:41153-41172 | Msa1346750:intron | 60.0% | |
| CGAATACGTAGTGCGGGTGG+GGG | - | tig0009225:41156-41175 | Msa1346750:intron | 60.0% | |
| GAATACGTAGTGCGGGTGGG+GGG | - | tig0009225:41157-41176 | Msa1346750:intron | 60.0% | |
| GGTCGTGGAAGAGGGAGTTC+TGG | - | tig0009225:42329-42348 | Msa1346750:CDS | 60.0% | |
| GAACTTACATCCCAGGGGGC+TGG | - | tig0009225:46517-46536 | Msa1346750:intron | 60.0% | |
| CCAATACGTTCCAGCCCCCT+GGG | + | tig0009225:46530-46549 | Msa1346750:intergenic | 60.0% | |
| ACCAATACGTTCCAGCCCCC+TGG | + | tig0009225:46531-46550 | Msa1346750:intergenic | 60.0% | |
| GCTCGAATATGCGGGTGGGG+TGG | - | tig0009225:39984-40003 | Msa1346750:intron | 65.0% | |
| CGAATATGCGGGTGGGGTGG+GGG | - | tig0009225:39987-40006 | Msa1346750:intron | 65.0% | |
| CCCAGGGGGCTGGAACGTAT+TGG | - | tig0009225:46527-46546 | Msa1346750:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0009225 | gene | 38912 | 48173 | 38912 | ID=Msa1346750;Name=Msa1346750 |
| tig0009225 | mRNA | 38912 | 48173 | 38912 | ID=Msa1346750-mRNA-1;Parent=Msa1346750;Name=Msa1346750-mRNA-1;_AED=0.12;_eAED=0.12;_QI=374|0.86|0.87|1|0.93|0.93|16|368|553 |
| tig0009225 | exon | 38912 | 39375 | 38912 | ID=Msa1346750-mRNA-1:exon:5648;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 39995 | 40156 | 39995 | ID=Msa1346750-mRNA-1:exon:5647;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 40354 | 40408 | 40354 | ID=Msa1346750-mRNA-1:exon:5646;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 41301 | 41407 | 41301 | ID=Msa1346750-mRNA-1:exon:5645;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 41581 | 41760 | 41581 | ID=Msa1346750-mRNA-1:exon:5644;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 41827 | 41921 | 41827 | ID=Msa1346750-mRNA-1:exon:5643;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 42324 | 42390 | 42324 | ID=Msa1346750-mRNA-1:exon:5642;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 43007 | 43073 | 43007 | ID=Msa1346750-mRNA-1:exon:5641;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 43156 | 43268 | 43156 | ID=Msa1346750-mRNA-1:exon:5640;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 43542 | 43586 | 43542 | ID=Msa1346750-mRNA-1:exon:5639;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 44151 | 44258 | 44151 | ID=Msa1346750-mRNA-1:exon:5638;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 44469 | 44519 | 44469 | ID=Msa1346750-mRNA-1:exon:5637;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 44640 | 44825 | 44640 | ID=Msa1346750-mRNA-1:exon:5636;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 45072 | 45158 | 45072 | ID=Msa1346750-mRNA-1:exon:5635;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 47416 | 47654 | 47416 | ID=Msa1346750-mRNA-1:exon:5634;Parent=Msa1346750-mRNA-1 |
| tig0009225 | exon | 47796 | 48173 | 47796 | ID=Msa1346750-mRNA-1:exon:5633;Parent=Msa1346750-mRNA-1 |
| tig0009225 | five_prime_UTR | 47800 | 48173 | 47800 | ID=Msa1346750-mRNA-1:five_prime_utr;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 47796 | 47799 | 47796 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 47416 | 47654 | 47416 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 45072 | 45158 | 45072 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 44640 | 44825 | 44640 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 44469 | 44519 | 44469 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 44151 | 44258 | 44151 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 43542 | 43586 | 43542 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 43156 | 43268 | 43156 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 43007 | 43073 | 43007 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 42324 | 42390 | 42324 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 41827 | 41921 | 41827 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 41581 | 41760 | 41581 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 41301 | 41407 | 41301 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 40354 | 40408 | 40354 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 39995 | 40156 | 39995 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | CDS | 39280 | 39375 | 39280 | ID=Msa1346750-mRNA-1:cds;Parent=Msa1346750-mRNA-1 |
| tig0009225 | three_prime_UTR | 38912 | 39279 | 38912 | ID=Msa1346750-mRNA-1:three_prime_utr;Parent=Msa1346750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
