Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315100 | XP_003627378.2 | 90.000 | 220 | 6 | 2 | 1 | 220 | 27 | 230 | 3.53e-138 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315100 | sp|Q9LQI7|CIA30_ARATH | 67.907 | 215 | 52 | 3 | 1 | 214 | 27 | 225 | 4.22e-105 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315100 | G7L8D3 | 90.000 | 220 | 6 | 2 | 1 | 220 | 27 | 230 | 1.69e-138 | 396 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074320 | Msa1315100 | 0.839636 | 1.407467e-57 | -8.615850e-47 |
| Msa0076040 | Msa1315100 | 0.803090 | 4.115007e-49 | -8.615850e-47 |
| Msa0082280 | Msa1315100 | 0.800687 | 1.282207e-48 | -8.615850e-47 |
| Msa0094580 | Msa1315100 | 0.816053 | 6.743087e-52 | -8.615850e-47 |
| Msa0618310 | Msa1315100 | 0.800779 | 1.227808e-48 | -8.615850e-47 |
| Msa0631250 | Msa1315100 | 0.802527 | 5.377803e-49 | -8.615850e-47 |
| Msa0657790 | Msa1315100 | 0.811112 | 8.241305e-51 | -8.615850e-47 |
| Msa0659030 | Msa1315100 | 0.805600 | 1.234545e-49 | -8.615850e-47 |
| Msa0687630 | Msa1315100 | 0.813866 | 2.060305e-51 | -8.615850e-47 |
| Msa0703230 | Msa1315100 | 0.829910 | 3.951490e-55 | -8.615850e-47 |
| Msa0705000 | Msa1315100 | 0.818726 | 1.686630e-52 | -8.615850e-47 |
| Msa0705040 | Msa1315100 | 0.810812 | 9.566676e-51 | -8.615850e-47 |
| Msa0718740 | Msa1315100 | 0.802512 | 5.416838e-49 | -8.615850e-47 |
| Msa0785130 | Msa1315100 | 0.806415 | 8.319080e-50 | -8.615850e-47 |
| Msa0806920 | Msa1315100 | 0.802153 | 6.423139e-49 | -8.615850e-47 |
| Msa0167480 | Msa1315100 | 0.815163 | 1.064009e-51 | -8.615850e-47 |
| Msa0174770 | Msa1315100 | 0.804434 | 2.164060e-49 | -8.615850e-47 |
| Msa0180020 | Msa1315100 | 0.810334 | 1.213512e-50 | -8.615850e-47 |
| Msa0181610 | Msa1315100 | 0.823504 | 1.336641e-53 | -8.615850e-47 |
| Msa0186890 | Msa1315100 | 0.826483 | 2.645893e-54 | -8.615850e-47 |
| Msa0187690 | Msa1315100 | 0.842941 | 1.901011e-58 | -8.615850e-47 |
| Msa0187930 | Msa1315100 | 0.843998 | 9.920671e-59 | -8.615850e-47 |
| Msa0194540 | Msa1315100 | 0.840237 | 9.811969e-58 | -8.615850e-47 |
| Msa1227690 | Msa1315100 | 0.827548 | 1.472452e-54 | -8.615850e-47 |
| Msa1234680 | Msa1315100 | 0.863649 | 2.141572e-64 | -8.615850e-47 |
| Msa1254710 | Msa1315100 | 0.802177 | 6.348238e-49 | -8.615850e-47 |
| Msa1276930 | Msa1315100 | 0.843461 | 1.381121e-58 | -8.615850e-47 |
| Msa1281190 | Msa1315100 | 0.806712 | 7.199719e-50 | -8.615850e-47 |
| Msa1307950 | Msa1315100 | 0.813133 | 2.985746e-51 | -8.615850e-47 |
| Msa1310690 | Msa1315100 | 0.801224 | 9.961568e-49 | -8.615850e-47 |
| Msa1315100 | Msa1335940 | 0.803459 | 3.452002e-49 | -8.615850e-47 |
| Msa1315100 | Msa1349570 | 0.816841 | 4.490698e-52 | -8.615850e-47 |
| Msa1315100 | Msa1363330 | 0.853352 | 2.529861e-61 | -8.615850e-47 |
| Msa1315100 | Msa1363860 | 0.806878 | 6.641757e-50 | -8.615850e-47 |
| Msa1315100 | Msa1369190 | 0.820341 | 7.221206e-53 | -8.615850e-47 |
| Msa1315100 | Msa1370860 | 0.811968 | 5.368925e-51 | -8.615850e-47 |
| Msa1315100 | Msa1374120 | 0.803612 | 3.208622e-49 | -8.615850e-47 |
| Msa1315100 | Msa1379760 | 0.806369 | 8.505110e-50 | -8.615850e-47 |
| Msa1315100 | Msa1386600 | 0.853297 | 2.622426e-61 | -8.615850e-47 |
| Msa1315100 | Msa1442850 | 0.850717 | 1.417443e-60 | -8.615850e-47 |
| Msa1315100 | Msa1448690 | 0.837174 | 6.071730e-57 | -8.615850e-47 |
| Msa1315100 | Msa1450280 | 0.804940 | 1.696689e-49 | -8.615850e-47 |
| Msa1315100 | Msa1461490 | 0.814217 | 1.723693e-51 | -8.615850e-47 |
| Msa1315100 | Msa1462860 | 0.825701 | 4.060163e-54 | -8.615850e-47 |
| Msa1315100 | Msa1465080 | 0.812216 | 4.740285e-51 | -8.615850e-47 |
| Msa0416400 | Msa1315100 | 0.826085 | 3.292227e-54 | -8.615850e-47 |
| Msa0443390 | Msa1315100 | 0.822839 | 1.911267e-53 | -8.615850e-47 |
| Msa1019240 | Msa1315100 | 0.828755 | 7.536421e-55 | -8.615850e-47 |
| Msa1019260 | Msa1315100 | 0.825213 | 5.299280e-54 | -8.615850e-47 |
| Msa1081150 | Msa1315100 | 0.816356 | 5.767252e-52 | -8.615850e-47 |
| Msa1082700 | Msa1315100 | 0.806908 | 6.544269e-50 | -8.615850e-47 |
| Msa1104140 | Msa1315100 | 0.815997 | 6.938067e-52 | -8.615850e-47 |
| Msa1104210 | Msa1315100 | 0.825042 | 5.815509e-54 | -8.615850e-47 |
| Msa0244780 | Msa1315100 | 0.844379 | 7.839615e-59 | -8.615850e-47 |
| Msa0264570 | Msa1315100 | 0.818967 | 1.486305e-52 | -8.615850e-47 |
| Msa0268130 | Msa1315100 | 0.843575 | 1.288001e-58 | -8.615850e-47 |
| Msa0298990 | Msa1315100 | 0.842195 | 2.999170e-58 | -8.615850e-47 |
| Msa0304590 | Msa1315100 | 0.817245 | 3.644294e-52 | -8.615850e-47 |
| Msa0304660 | Msa1315100 | 0.800611 | 1.328755e-48 | -8.615850e-47 |
| Msa0331700 | Msa1315100 | 0.805607 | 1.230024e-49 | -8.615850e-47 |
| Msa0355270 | Msa1315100 | 0.800710 | 1.268559e-48 | -8.615850e-47 |
| Msa1126510 | Msa1315100 | 0.813498 | 2.483086e-51 | -8.615850e-47 |
| Msa1126770 | Msa1315100 | 0.810675 | 1.024570e-50 | -8.615850e-47 |
| Msa1166860 | Msa1315100 | 0.815710 | 8.040914e-52 | -8.615850e-47 |
| Msa1166870 | Msa1315100 | 0.822587 | 2.187671e-53 | -8.615850e-47 |
| Msa1184370 | Msa1315100 | 0.819505 | 1.121275e-52 | -8.615850e-47 |
| Msa0508590 | Msa1315100 | 0.831733 | 1.412191e-55 | -8.615850e-47 |
| Msa0508630 | Msa1315100 | 0.830224 | 3.311982e-55 | -8.615850e-47 |
| Msa0526540 | Msa1315100 | 0.856197 | 3.786951e-62 | -8.615850e-47 |
| Msa0541860 | Msa1315100 | 0.824372 | 8.363702e-54 | -8.615850e-47 |
| Msa0571920 | Msa1315100 | 0.817210 | 3.711792e-52 | -8.615850e-47 |
| Msa0576940 | Msa1315100 | 0.863597 | 2.221680e-64 | -8.615850e-47 |
| Msa0581070 | Msa1315100 | 0.812620 | 3.868601e-51 | -8.615850e-47 |
| Msa0864010 | Msa1315100 | 0.801550 | 8.540559e-49 | -8.615850e-47 |
| Msa0960830 | Msa1315100 | 0.803708 | 3.064508e-49 | -8.615850e-47 |
| Msa0966270 | Msa1315100 | 0.825493 | 4.550231e-54 | -8.615850e-47 |
| Msa0970520 | Msa1315100 | 0.804997 | 1.650807e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315100 | MtrunA17_Chr8g0344731 | 90.000 | 220 | 6 | 2 | 1 | 220 | 27 | 230 | 3.25e-142 | 396 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315100 | AT1G17350.3 | 67.907 | 215 | 52 | 3 | 1 | 214 | 27 | 225 | 4.29e-106 | 305 |
| Msa1315100 | AT1G17350.5 | 67.907 | 215 | 52 | 3 | 1 | 214 | 27 | 225 | 4.29e-106 | 305 |
| Msa1315100 | AT1G17350.1 | 67.907 | 215 | 52 | 3 | 1 | 214 | 27 | 225 | 4.29e-106 | 305 |
| Msa1315100 | AT1G17350.4 | 67.907 | 215 | 52 | 3 | 1 | 214 | 27 | 225 | 4.29e-106 | 305 |
| Msa1315100 | AT1G17350.2 | 68.293 | 205 | 56 | 3 | 1 | 204 | 27 | 223 | 9.07e-99 | 287 |
| Msa1315100 | AT1G72420.1 | 63.426 | 216 | 61 | 4 | 1 | 214 | 27 | 226 | 3.02e-95 | 278 |
| Msa1315100 | AT1G72420.2 | 63.426 | 216 | 61 | 4 | 1 | 214 | 27 | 226 | 3.02e-95 | 278 |
| Msa1315100 | AT1G72420.4 | 63.426 | 216 | 61 | 4 | 1 | 214 | 16 | 215 | 5.32e-95 | 276 |
| Msa1315100 | AT1G72420.5 | 67.290 | 107 | 34 | 1 | 1 | 106 | 27 | 133 | 2.47e-47 | 154 |
| Msa1315100 | AT1G72420.3 | 67.290 | 107 | 34 | 1 | 1 | 106 | 27 | 133 | 5.77e-47 | 152 |
| Msa1315100 | AT1G72420.6 | 67.290 | 107 | 34 | 1 | 1 | 106 | 27 | 133 | 5.77e-47 | 152 |
Find 73 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTATTCTGATTCTGAATT+TGG | 0.164131 | 8_4:+14364356 | Msa1315100:CDS |
| TGCAATATACCAGTTATCTT+TGG | 0.216625 | 8_4:-14365660 | None:intergenic |
| ATTGCCAACAACTTGTAATA+AGG | 0.238491 | 8_4:+14368288 | Msa1315100:three_prime_UTR |
| ACGATAGCTATGAAACTTAA+AGG | 0.245721 | 8_4:+14365425 | Msa1315100:CDS |
| CAGATACCTGAATCTGAAAA+TGG | 0.295053 | 8_4:+14364500 | Msa1315100:CDS |
| CATCATTATTATTACAAAAC+AGG | 0.325435 | 8_4:-14367986 | None:intergenic |
| TGCAGATATACACGGAGAAT+TGG | 0.328795 | 8_4:+14365582 | Msa1315100:intron |
| CAAAACCTATACTACATCAT+TGG | 0.343817 | 8_4:-14367914 | None:intergenic |
| GCAATATACCAGTTATCTTT+GGG | 0.348274 | 8_4:-14365659 | None:intergenic |
| TTGTGGAATGCGCTCCAAAA+AGG | 0.350095 | 8_4:+14364604 | Msa1315100:CDS |
| TTTACGTGCCCAAAGATAAC+TGG | 0.351126 | 8_4:+14365651 | Msa1315100:CDS |
| CCAAGCAAGAATTATCAAAA+TGG | 0.360136 | 8_4:+14364330 | Msa1315100:CDS |
| ATTTCAGACTTGAACTTGAA+TGG | 0.375010 | 8_4:+14367867 | Msa1315100:CDS |
| CAGGTGATTTGTGGTGGTGT+GGG | 0.375042 | 8_4:+14367277 | Msa1315100:CDS |
| GGTGTCCCAGGTGCTAGATC+TGG | 0.377828 | 8_4:+14367836 | Msa1315100:CDS |
| TAGCTTCGAGAAGTCGAAAA+TGG | 0.384475 | 8_4:-14368318 | None:intergenic |
| ATGAATCCATCACGTGTTCT+TGG | 0.389127 | 8_4:+14367785 | Msa1315100:CDS |
| GTGCACATGCGAGGTGGCTT+TGG | 0.390049 | 8_4:-14368384 | None:intergenic |
| CATTGGGTTCTCACTTCTCA+TGG | 0.392116 | 8_4:-14367897 | None:intergenic |
| TTGCCCTTATTACAAGTTGT+TGG | 0.420192 | 8_4:-14368292 | None:intergenic |
| TCAGGTGATTTGTGGTGGTG+TGG | 0.422977 | 8_4:+14367276 | Msa1315100:CDS |
| TTGCCAACAACTTGTAATAA+GGG | 0.429244 | 8_4:+14368289 | Msa1315100:three_prime_UTR |
| TCTGAAAATGGTAAAACTAC+TGG | 0.430983 | 8_4:+14364512 | Msa1315100:CDS |
| GAGGGTGAGTAAAGTTAAGT+TGG | 0.434291 | 8_4:-14368362 | None:intergenic |
| CTCTGGGAATCTTTCTCTTG+AGG | 0.435126 | 8_4:+14364541 | Msa1315100:CDS |
| TTTAAGCTGGATCTGGCCTC+AGG | 0.438196 | 8_4:+14367258 | Msa1315100:CDS |
| TATTCTGATTCTGAATTTGG+AGG | 0.441704 | 8_4:+14364359 | Msa1315100:CDS |
| ATCTGGCCTCAGGTGATTTG+TGG | 0.445665 | 8_4:+14367268 | Msa1315100:CDS |
| GTATGGGTTTAAGCTGGATC+TGG | 0.447946 | 8_4:+14367251 | Msa1315100:intron |
| AAAACCTATACTACATCATT+GGG | 0.453436 | 8_4:-14367913 | None:intergenic |
| AATGCCGAGGGTGGTGTCCC+AGG | 0.459127 | 8_4:+14367824 | Msa1315100:CDS |
| GCAGATATACACGGAGAATT+GGG | 0.459883 | 8_4:+14365583 | Msa1315100:intron |
| GTTTGATGGCTTCATTGACT+TGG | 0.463757 | 8_4:+14365391 | Msa1315100:intron |
| CACATGCGAGGTGGCTTTGG+AGG | 0.478138 | 8_4:-14368381 | None:intergenic |
| TGGTGTGGGGTGGTGCGGTA+CGG | 0.486508 | 8_4:+14367291 | Msa1315100:CDS |
| CCTGGTCCAGATCTAGCACC+TGG | 0.491978 | 8_4:-14367842 | None:intergenic |
| AGAACCCAATGATGTAGTAT+AGG | 0.502929 | 8_4:+14367909 | Msa1315100:exon |
| GCTATGAAACTTAAAGGAGA+TGG | 0.505648 | 8_4:+14365431 | Msa1315100:CDS |
| TGATTTGTGGTGGTGTGGGG+TGG | 0.523835 | 8_4:+14367281 | Msa1315100:CDS |
| GAGTTGTCCTCCATCTGTCC+AGG | 0.525035 | 8_4:-14365614 | None:intergenic |
| GATCTAGTATGGGTTTAAGC+TGG | 0.525359 | 8_4:+14367245 | Msa1315100:intron |
| CTTTCTCTTGAGGTTACTCA+AGG | 0.526391 | 8_4:+14364551 | Msa1315100:CDS |
| TAGCTCGATATGTACCTACT+TGG | 0.540332 | 8_4:+14367732 | Msa1315100:CDS |
| GGTTAACTCACCTGGACAGA+TGG | 0.543070 | 8_4:+14365604 | Msa1315100:CDS |
| AGGTGATTTGTGGTGGTGTG+GGG | 0.543099 | 8_4:+14367278 | Msa1315100:CDS |
| TGTGGTGGTGTGGGGTGGTG+CGG | 0.551250 | 8_4:+14367286 | Msa1315100:CDS |
| AAGTGGAATATTAGTAGAGG+TGG | 0.553563 | 8_4:+14364578 | Msa1315100:CDS |
| GCTAAGTGGAATATTAGTAG+AGG | 0.567692 | 8_4:+14364575 | Msa1315100:CDS |
| TAATGATGTCATTAATCAAG+TGG | 0.568925 | 8_4:+14368233 | Msa1315100:three_prime_UTR |
| GACAGATGGAGGACAACTCA+TGG | 0.575304 | 8_4:+14365618 | Msa1315100:CDS |
| AGCACCTGGGACACCACCCT+CGG | 0.576679 | 8_4:-14367828 | None:intergenic |
| CCAGGTGCTAGATCTGGACC+AGG | 0.581357 | 8_4:+14367842 | Msa1315100:CDS |
| GAGAATTGGGTTAACTCACC+TGG | 0.591802 | 8_4:+14365596 | Msa1315100:CDS |
| AGGTTACTCAAGGTGCTAAG+TGG | 0.593770 | 8_4:+14364561 | Msa1315100:CDS |
| CGATATGTACCTACTTGGAG+AGG | 0.604855 | 8_4:+14367737 | Msa1315100:CDS |
| GACATGCCAAGAACACGTGA+TGG | 0.606451 | 8_4:-14367791 | None:intergenic |
| ATCATTATTATTACAAAACA+GGG | 0.607455 | 8_4:-14367985 | None:intergenic |
| GTAGGTACATATCGAGCTAG+AGG | 0.608047 | 8_4:-14367728 | None:intergenic |
| TGGCCTCAGGTGATTTGTGG+TGG | 0.608727 | 8_4:+14367271 | Msa1315100:CDS |
| ATGTCATTAATCAAGTGGTA+TGG | 0.616154 | 8_4:+14368238 | Msa1315100:three_prime_UTR |
| ACATGCGAGGTGGCTTTGGA+GGG | 0.620902 | 8_4:-14368380 | None:intergenic |
| TCTAAAAGTACACATTCAGA+CGG | 0.626724 | 8_4:-14368432 | None:intergenic |
| AGTTCAAGTCTGAAATCACC+TGG | 0.640637 | 8_4:-14367860 | None:intergenic |
| ATAACGTTCCCTCTCCAAGT+AGG | 0.644498 | 8_4:-14367746 | None:intergenic |
| TAACTCACCTGGACAGATGG+AGG | 0.644910 | 8_4:+14365607 | Msa1315100:CDS |
| GTGGTATGGTGTAACAATGG+TGG | 0.645793 | 8_4:+14368252 | Msa1315100:three_prime_UTR |
| TAATAGCTTTCATATTCACA+TGG | 0.647136 | 8_4:+14368068 | Msa1315100:three_prime_UTR |
| ATGGTGTAACAATGGTGGAA+AGG | 0.668201 | 8_4:+14368257 | Msa1315100:three_prime_UTR |
| GATATGTACCTACTTGGAGA+GGG | 0.669899 | 8_4:+14367738 | Msa1315100:CDS |
| ACACCACCACAAATCACCTG+AGG | 0.680040 | 8_4:-14367274 | None:intergenic |
| CAAGTGGTATGGTGTAACAA+TGG | 0.686669 | 8_4:+14368249 | Msa1315100:three_prime_UTR |
| GATTATGGTGCAGATATACA+CGG | 0.690928 | 8_4:+14365574 | Msa1315100:intron |
| CTGGTCCAGATCTAGCACCT+GGG | 0.695025 | 8_4:-14367841 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATCAATTTAATGAA+TGG | + | chr8_4:14366550-14366569 | Msa1315100:intron | 10.0% |
| !!! | AAGTTGAATATATATTTTTC+AGG | - | chr8_4:14364305-14364324 | None:intergenic | 15.0% |
| !! | TTTAAATAATCAATTCAAAC+AGG | + | chr8_4:14364899-14364918 | Msa1315100:intron | 15.0% |
| !!! | CAGAAAAAATATAGAATTTT+TGG | + | chr8_4:14365906-14365925 | Msa1315100:intron | 15.0% |
| !!! | TTAAAAAACACTAACATTTT+AGG | - | chr8_4:14366715-14366734 | None:intergenic | 15.0% |
| !!! | TTTGATTTTGAAGAAAAAAA+AGG | + | chr8_4:14367422-14367441 | Msa1315100:intron | 15.0% |
| !!! | TTGATTTTGAAGAAAAAAAA+GGG | + | chr8_4:14367423-14367442 | Msa1315100:intron | 15.0% |
| !! | ATCATTATTATTACAAAACA+GGG | - | chr8_4:14367988-14368007 | None:intergenic | 15.0% |
| !! | TTCTTAAAGAAAAAATATGT+TGG | + | chr8_4:14368022-14368041 | Msa1315100:three_prime_UTR | 15.0% |
| !! | TTTAGACAAAAATATCATTT+CGG | + | chr8_4:14368449-14368468 | Msa1315100:three_prime_UTR | 15.0% |
| !!! | TTGAATATATATTTTTCAGG+TGG | - | chr8_4:14364302-14364321 | None:intergenic | 20.0% |
| !!! | ACTTTGGTTAATTTAATTTC+TGG | + | chr8_4:14364412-14364431 | Msa1315100:intron | 20.0% |
| !!! | CTTTGGTTAATTTAATTTCT+GGG | + | chr8_4:14364413-14364432 | Msa1315100:intron | 20.0% |
| !!! | GTTTGTTTTGATATAGAAAT+AGG | - | chr8_4:14364728-14364747 | None:intergenic | 20.0% |
| !! | ATATCAAAACAAACAGATTA+TGG | + | chr8_4:14364734-14364753 | Msa1315100:intron | 20.0% |
| !!! | ATTTGGCATTTTAAAAGAAA+AGG | - | chr8_4:14365484-14365503 | None:intergenic | 20.0% |
| !!! | TTTTTATAATAAGTCACGTT+TGG | - | chr8_4:14365975-14365994 | None:intergenic | 20.0% |
| !!! | ATTTTGCATTCAGATAAAAA+AGG | - | chr8_4:14366085-14366104 | None:intergenic | 20.0% |
| !! | ACCAAATAATTTAAACTTTG+GGG | - | chr8_4:14366594-14366613 | None:intergenic | 20.0% |
| !! | CACCAAATAATTTAAACTTT+GGG | - | chr8_4:14366595-14366614 | None:intergenic | 20.0% |
| !! | TCACCAAATAATTTAAACTT+TGG | - | chr8_4:14366596-14366615 | None:intergenic | 20.0% |
| !!! | TTAAATTATTTGGTGAAATC+AGG | + | chr8_4:14366600-14366619 | Msa1315100:intron | 20.0% |
| !! | ATAACAAGTACAAAATCAAT+GGG | - | chr8_4:14367111-14367130 | None:intergenic | 20.0% |
| !! | TATAACAAGTACAAAATCAA+TGG | - | chr8_4:14367112-14367131 | None:intergenic | 20.0% |
| !!! | TATTTTTGTCTATTTTGTTC+TGG | + | chr8_4:14367204-14367223 | Msa1315100:intron | 20.0% |
| !! | CATCATTATTATTACAAAAC+AGG | - | chr8_4:14367989-14368008 | None:intergenic | 20.0% |
| !!! | AATATATATTTTTCAGGTGG+TGG | - | chr8_4:14364299-14364318 | None:intergenic | 25.0% |
| ! | TTGTATTCTGATTCTGAATT+TGG | + | chr8_4:14364356-14364375 | Msa1315100:CDS | 25.0% |
| ! | TCAAATTGTTAATGTTGTTC+AGG | + | chr8_4:14364458-14364477 | Msa1315100:intron | 25.0% |
| ! | CAAGATAACTTATAGCTTAT+AGG | - | chr8_4:14364780-14364799 | None:intergenic | 25.0% |
| !! | ATAGCATTGAATTGTATGAA+TGG | + | chr8_4:14364964-14364983 | Msa1315100:intron | 25.0% |
| !! | GACTTATTAGCTTATCTAAT+GGG | - | chr8_4:14365233-14365252 | None:intergenic | 25.0% |
| !! | TGACTTATTAGCTTATCTAA+TGG | - | chr8_4:14365234-14365253 | None:intergenic | 25.0% |
| ! | AGCTAATAAGTCAATTCAAA+CGG | + | chr8_4:14365241-14365260 | Msa1315100:intron | 25.0% |
| ! | AATTCAATTCAATATGCACT+AGG | - | chr8_4:14365294-14365313 | None:intergenic | 25.0% |
| ! | ATTGAATTGAATTGTCTGAT+TGG | + | chr8_4:14365301-14365320 | Msa1315100:intron | 25.0% |
| ! | AAATTTCCTAGGATATCATT+TGG | - | chr8_4:14365501-14365520 | None:intergenic | 25.0% |
| ! | TATTGTAACTAGTTGGATTA+TGG | + | chr8_4:14365559-14365578 | Msa1315100:intron | 25.0% |
| ! | CATATCAATCATTACTAATC+AGG | - | chr8_4:14365720-14365739 | None:intergenic | 25.0% |
| ! | TATCAAAATCTGCTATGTTA+TGG | - | chr8_4:14365791-14365810 | None:intergenic | 25.0% |
| !! | ATTTTCCTAATAGAGAAACT+AGG | - | chr8_4:14365841-14365860 | None:intergenic | 25.0% |
| ! | TTTCTCTATTAGGAAAATAG+CGG | + | chr8_4:14365843-14365862 | Msa1315100:intron | 25.0% |
| ! | ATTCAGATAAAAAAGGAAAC+GGG | - | chr8_4:14366078-14366097 | None:intergenic | 25.0% |
| ! | CATTCAGATAAAAAAGGAAA+CGG | - | chr8_4:14366079-14366098 | None:intergenic | 25.0% |
| ! | TCTATTTAACAATGAAGTTC+TGG | + | chr8_4:14366175-14366194 | Msa1315100:intron | 25.0% |
| !! | ATGATAACCTGTAATTTTGT+AGG | + | chr8_4:14366243-14366262 | Msa1315100:intron | 25.0% |
| ! | AATGAGATAGTATACATTTG+TGG | - | chr8_4:14366334-14366353 | None:intergenic | 25.0% |
| ! | TCCCCAAAGTTTAAATTATT+TGG | + | chr8_4:14366590-14366609 | Msa1315100:intron | 25.0% |
| !! | TATGATTCATTTGTTGCATT+TGG | - | chr8_4:14366743-14366762 | None:intergenic | 25.0% |
| ! | AATGCAACAAATGAATCATA+AGG | + | chr8_4:14366743-14366762 | Msa1315100:intron | 25.0% |
| ! | CTTTACAAACAAGTTCAAAT+TGG | - | chr8_4:14366835-14366854 | None:intergenic | 25.0% |
| !! | CAATTTGAACTTGTTTGTAA+AGG | + | chr8_4:14366833-14366852 | Msa1315100:intron | 25.0% |
| ! | TAAGCTAAATTTAGCTACAA+CGG | + | chr8_4:14367024-14367043 | Msa1315100:intron | 25.0% |
| ! | TTATCTATTGAGTAAACACT+TGG | + | chr8_4:14367393-14367412 | Msa1315100:intron | 25.0% |
| ! | TATCTATTGAGTAAACACTT+GGG | + | chr8_4:14367394-14367413 | Msa1315100:intron | 25.0% |
| !!! | AAGAAAAAAAAGGGTTTTGA+TGG | + | chr8_4:14367432-14367451 | Msa1315100:intron | 25.0% |
| ! | CTAAAAGAATAATTGTTGCT+TGG | + | chr8_4:14367540-14367559 | Msa1315100:intron | 25.0% |
| ! | TTCTATGTATATGTAAGTGA+AGG | + | chr8_4:14367581-14367600 | Msa1315100:intron | 25.0% |
| ! | TCTATGTATATGTAAGTGAA+GGG | + | chr8_4:14367582-14367601 | Msa1315100:intron | 25.0% |
| ! | AAAACCTATACTACATCATT+GGG | - | chr8_4:14367916-14367935 | None:intergenic | 25.0% |
| ! | TAATAGCTTTCATATTCACA+TGG | + | chr8_4:14368068-14368087 | Msa1315100:three_prime_UTR | 25.0% |
| ! | TAATGATGTCATTAATCAAG+TGG | + | chr8_4:14368233-14368252 | Msa1315100:three_prime_UTR | 25.0% |
| !!! | TTCAAAAGTGTATTTTCGAA+CGG | - | chr8_4:14368477-14368496 | None:intergenic | 25.0% |
| !! | CCATTTTGATAATTCTTGCT+TGG | - | chr8_4:14364333-14364352 | None:intergenic | 30.0% |
| CCAAGCAAGAATTATCAAAA+TGG | + | chr8_4:14364330-14364349 | Msa1315100:CDS | 30.0% | |
| TATTCTGATTCTGAATTTGG+AGG | + | chr8_4:14364359-14364378 | Msa1315100:CDS | 30.0% | |
| ! | GTTGCTAAAGTTTGAAACTT+TGG | + | chr8_4:14364396-14364415 | Msa1315100:intron | 30.0% |
| ! | GTTTTACCATTTTCAGATTC+AGG | - | chr8_4:14364509-14364528 | None:intergenic | 30.0% |
| TCTGAAAATGGTAAAACTAC+TGG | + | chr8_4:14364512-14364531 | Msa1315100:CDS | 30.0% | |
| ! | AAAACTACTGGAATTTTCTC+TGG | + | chr8_4:14364524-14364543 | Msa1315100:CDS | 30.0% |
| ! | AAACTACTGGAATTTTCTCT+GGG | + | chr8_4:14364525-14364544 | Msa1315100:CDS | 30.0% |
| ! | AGTTAAAAAAGCCACCTTTT+TGG | - | chr8_4:14364621-14364640 | None:intergenic | 30.0% |
| ! | TCAAAGACTTTAGTGTTGTT+TGG | + | chr8_4:14364640-14364659 | Msa1315100:intron | 30.0% |
| AAGTTATCTTGTAGAGCTTA+TGG | + | chr8_4:14364789-14364808 | Msa1315100:intron | 30.0% | |
| TTGAGTGATTATAGTGTAAG+TGG | + | chr8_4:14365036-14365055 | Msa1315100:intron | 30.0% | |
| TTAGCTTATCTAATGGGATA+AGG | - | chr8_4:14365227-14365246 | None:intergenic | 30.0% | |
| !! | TTCTCATTTTTGTTCAACGA+CGG | + | chr8_4:14365331-14365350 | Msa1315100:intron | 30.0% |
| !! | TCTGTGTTTTTGTAGTTTGA+TGG | + | chr8_4:14365377-14365396 | Msa1315100:intron | 30.0% |
| ACGATAGCTATGAAACTTAA+AGG | + | chr8_4:14365425-14365444 | Msa1315100:CDS | 30.0% | |
| TTAAAAGAAAAGGACACTCA+CGG | - | chr8_4:14365474-14365493 | None:intergenic | 30.0% | |
| AAAATGCCAAATGATATCCT+AGG | + | chr8_4:14365492-14365511 | Msa1315100:intron | 30.0% | |
| TGATATCCTAGGAAATTTAG+AGG | + | chr8_4:14365503-14365522 | Msa1315100:intron | 30.0% | |
| GATATCCTAGGAAATTTAGA+GGG | + | chr8_4:14365504-14365523 | Msa1315100:intron | 30.0% | |
| ! | TTGCAAGTATTGTAACTAGT+TGG | + | chr8_4:14365552-14365571 | Msa1315100:intron | 30.0% |
| GCAATATACCAGTTATCTTT+GGG | - | chr8_4:14365662-14365681 | None:intergenic | 30.0% | |
| TGCAATATACCAGTTATCTT+TGG | - | chr8_4:14365663-14365682 | None:intergenic | 30.0% | |
| AGATAACTGGTATATTGCAA+AGG | + | chr8_4:14365664-14365683 | Msa1315100:intron | 30.0% | |
| AATGATTGATATGTTCGACT+AGG | + | chr8_4:14365727-14365746 | Msa1315100:intron | 30.0% | |
| ACTATCCTAGTTTCTCTATT+AGG | + | chr8_4:14365833-14365852 | Msa1315100:intron | 30.0% | |
| TTCTCTATTAGGAAAATAGC+GGG | + | chr8_4:14365844-14365863 | Msa1315100:intron | 30.0% | |
| AGCGAAGCTTACATATTAAA+AGG | - | chr8_4:14366050-14366069 | None:intergenic | 30.0% | |
| TTCAGATAAAAAAGGAAACG+GGG | - | chr8_4:14366077-14366096 | None:intergenic | 30.0% | |
| AGTCAACTATACACAAGAAA+AGG | - | chr8_4:14366109-14366128 | None:intergenic | 30.0% | |
| TGACTTATTTCAATGACATG+CGG | + | chr8_4:14366124-14366143 | Msa1315100:intron | 30.0% | |
| TAAATAGAAGATAGCATTGC+AGG | - | chr8_4:14366163-14366182 | None:intergenic | 30.0% | |
| AATACGTCCTACAAAATTAC+AGG | - | chr8_4:14366253-14366272 | None:intergenic | 30.0% | |
| ! | CTACGTTTTGCAATTTAATC+AGG | - | chr8_4:14366364-14366383 | None:intergenic | 30.0% |
| TTGAGATTAAGGACTAGATA+AGG | + | chr8_4:14366405-14366424 | Msa1315100:intron | 30.0% | |
| ACTTCGATTATGCAAATTTC+TGG | + | chr8_4:14366527-14366546 | Msa1315100:intron | 30.0% | |
| AAACTAGAATCAAGAGTTTG+AGG | + | chr8_4:14366649-14366668 | Msa1315100:intron | 30.0% | |
| ! | CTAACATTTTAGGCATGTAA+AGG | - | chr8_4:14366705-14366724 | None:intergenic | 30.0% |
| ! | TTTGAACTTGTTTGTAAAGG+AGG | + | chr8_4:14366836-14366855 | Msa1315100:intron | 30.0% |
| TTGTTTGTAAAGGAGGTTAA+CGG | + | chr8_4:14366843-14366862 | Msa1315100:intron | 30.0% | |
| AAGTTTGCAATGAAACCAAA+AGG | + | chr8_4:14366952-14366971 | Msa1315100:intron | 30.0% | |
| ! | AAATTTAGCTTAGTAGAGCT+AGG | - | chr8_4:14367016-14367035 | None:intergenic | 30.0% |
| AAGCTAAATTTAGCTACAAC+GGG | + | chr8_4:14367025-14367044 | Msa1315100:intron | 30.0% | |
| TCAATATTACTAAAGAGCGA+CGG | - | chr8_4:14367070-14367089 | None:intergenic | 30.0% | |
| ATCTATTGAGTAAACACTTG+GGG | + | chr8_4:14367395-14367414 | Msa1315100:intron | 30.0% | |
| TGGTCAGGAAATACTATAAA+CGG | + | chr8_4:14367452-14367471 | Msa1315100:intron | 30.0% | |
| AGGAAATACTATAAACGGAT+AGG | + | chr8_4:14367457-14367476 | Msa1315100:intron | 30.0% | |
| ATATACATAGAAAGCCAACA+AGG | - | chr8_4:14367573-14367592 | None:intergenic | 30.0% | |
| ATTTCAGACTTGAACTTGAA+TGG | + | chr8_4:14367867-14367886 | Msa1315100:CDS | 30.0% | |
| CAAAACCTATACTACATCAT+TGG | - | chr8_4:14367917-14367936 | None:intergenic | 30.0% | |
| ! | AGTCAAGATTTTGCTCTTTT+AGG | + | chr8_4:14367948-14367967 | Msa1315100:three_prime_UTR | 30.0% |
| ! | GTCAAGATTTTGCTCTTTTA+GGG | + | chr8_4:14367949-14367968 | Msa1315100:three_prime_UTR | 30.0% |
| ATGTCATTAATCAAGTGGTA+TGG | + | chr8_4:14368238-14368257 | Msa1315100:three_prime_UTR | 30.0% | |
| ATTGCCAACAACTTGTAATA+AGG | + | chr8_4:14368288-14368307 | Msa1315100:three_prime_UTR | 30.0% | |
| TTGCCAACAACTTGTAATAA+GGG | + | chr8_4:14368289-14368308 | Msa1315100:three_prime_UTR | 30.0% | |
| ! | TCTAAAAGTACACATTCAGA+CGG | - | chr8_4:14368435-14368454 | None:intergenic | 30.0% |
| CAGATACCTGAATCTGAAAA+TGG | + | chr8_4:14364500-14364519 | Msa1315100:CDS | 35.0% | |
| GCTAAGTGGAATATTAGTAG+AGG | + | chr8_4:14364575-14364594 | Msa1315100:CDS | 35.0% | |
| AAGTGGAATATTAGTAGAGG+TGG | + | chr8_4:14364578-14364597 | Msa1315100:CDS | 35.0% | |
| !! | ATTAGTAGAGGTGGATTTTG+TGG | + | chr8_4:14364587-14364606 | Msa1315100:CDS | 35.0% |
| ! | CTCACAAGTTTTTATGCTAG+TGG | + | chr8_4:14364871-14364890 | Msa1315100:intron | 35.0% |
| TGTTGTCGAACTTGAACAAA+GGG | - | chr8_4:14364925-14364944 | None:intergenic | 35.0% | |
| TTGTTGTCGAACTTGAACAA+AGG | - | chr8_4:14364926-14364945 | None:intergenic | 35.0% | |
| AAGTTCGACAACAACATAGA+TGG | + | chr8_4:14364932-14364951 | Msa1315100:intron | 35.0% | |
| ! | CTCAATGATTTTGCAGTGTT+TGG | + | chr8_4:14365002-14365021 | Msa1315100:intron | 35.0% |
| CAAAAACACAGAATTGCGTA+AGG | - | chr8_4:14365369-14365388 | None:intergenic | 35.0% | |
| GCTATGAAACTTAAAGGAGA+TGG | + | chr8_4:14365431-14365450 | Msa1315100:CDS | 35.0% | |
| TCAAACCCTCTAAATTTCCT+AGG | - | chr8_4:14365512-14365531 | None:intergenic | 35.0% | |
| ! | GGGTTTGAAGTTTCATTTCA+TGG | + | chr8_4:14365524-14365543 | Msa1315100:intron | 35.0% |
| GATTATGGTGCAGATATACA+CGG | + | chr8_4:14365574-14365593 | Msa1315100:intron | 35.0% | |
| GTAAGCAGTAAGATGGAAAT+GGG | - | chr8_4:14365695-14365714 | None:intergenic | 35.0% | |
| TGTAAGCAGTAAGATGGAAA+TGG | - | chr8_4:14365696-14365715 | None:intergenic | 35.0% | |
| !! | TAGTGTTGAGGTTTTTGTTG+CGG | - | chr8_4:14365817-14365836 | None:intergenic | 35.0% |
| TCAGATAAAAAAGGAAACGG+GGG | - | chr8_4:14366076-14366095 | None:intergenic | 35.0% | |
| ACTATTGTAAAACCTTGCAG+TGG | - | chr8_4:14366472-14366491 | None:intergenic | 35.0% | |
| ! | ATTTAAACTTTGGGGAGAGT+TGG | - | chr8_4:14366586-14366605 | None:intergenic | 35.0% |
| TAAAGGACCAACTAAATTGC+AGG | - | chr8_4:14366688-14366707 | None:intergenic | 35.0% | |
| ! | TCTGTGACATTGTTTGAGTT+GGG | - | chr8_4:14366903-14366922 | None:intergenic | 35.0% |
| ! | ATGGGTTTCTTCATGTTTTC+TGG | - | chr8_4:14366926-14366945 | None:intergenic | 35.0% |
| TATTGTGGTCTGATCTAGTA+TGG | + | chr8_4:14367234-14367253 | Msa1315100:intron | 35.0% | |
| ATTGTGGTCTGATCTAGTAT+GGG | + | chr8_4:14367235-14367254 | Msa1315100:intron | 35.0% | |
| !! | AAAAAAGGGTTTTGATGGTC+AGG | + | chr8_4:14367437-14367456 | Msa1315100:intron | 35.0% |
| TGTATATGTAAGTGAAGGGA+TGG | + | chr8_4:14367586-14367605 | Msa1315100:intron | 35.0% | |
| GTATATGTAAGTGAAGGGAT+GGG | + | chr8_4:14367587-14367606 | Msa1315100:intron | 35.0% | |
| CATCACTTCAGTGCTTAATA+TGG | - | chr8_4:14367623-14367642 | None:intergenic | 35.0% | |
| AGAACCCAATGATGTAGTAT+AGG | + | chr8_4:14367909-14367928 | Msa1315100:exon | 35.0% | |
| TTGCCCTTATTACAAGTTGT+TGG | - | chr8_4:14368295-14368314 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTGTGCACATGCG+AGG | - | chr8_4:14368396-14368415 | None:intergenic | 35.0% |
| CTTTCTCTTGAGGTTACTCA+AGG | + | chr8_4:14364551-14364570 | Msa1315100:CDS | 40.0% | |
| AAGGAGATGTGAGACTCTAT+GGG | - | chr8_4:14365208-14365227 | None:intergenic | 40.0% | |
| TAAGGAGATGTGAGACTCTA+TGG | - | chr8_4:14365209-14365228 | None:intergenic | 40.0% | |
| ! | GTTTGATGGCTTCATTGACT+TGG | + | chr8_4:14365391-14365410 | Msa1315100:intron | 40.0% |
| TGCAGATATACACGGAGAAT+TGG | + | chr8_4:14365582-14365601 | Msa1315100:intron | 40.0% | |
| GCAGATATACACGGAGAATT+GGG | + | chr8_4:14365583-14365602 | Msa1315100:intron | 40.0% | |
| TTTACGTGCCCAAAGATAAC+TGG | + | chr8_4:14365651-14365670 | Msa1315100:CDS | 40.0% | |
| ! | TCAGGTTGTAAGCAGTAAGA+TGG | - | chr8_4:14365702-14365721 | None:intergenic | 40.0% |
| GAGAAACTAGGATAGTGTTG+AGG | - | chr8_4:14365829-14365848 | None:intergenic | 40.0% | |
| GCAAAACGTAGTTACCTTGA+CGG | + | chr8_4:14366373-14366392 | Msa1315100:intron | 40.0% | |
| CAAAACGTAGTTACCTTGAC+GGG | + | chr8_4:14366374-14366393 | Msa1315100:intron | 40.0% | |
| !! | GGGCTTGAACTTTGAGATTA+AGG | + | chr8_4:14366394-14366413 | Msa1315100:intron | 40.0% |
| ! | GTAATTTTCCATCCACTGCA+AGG | + | chr8_4:14366457-14366476 | Msa1315100:intron | 40.0% |
| TTGTAAAACCTTGCAGTGGA+TGG | - | chr8_4:14366468-14366487 | None:intergenic | 40.0% | |
| GAAATCAGGTTAACTCGCTT+AGG | + | chr8_4:14366614-14366633 | Msa1315100:intron | 40.0% | |
| GAACAAGCCTGCAATTTAGT+TGG | + | chr8_4:14366678-14366697 | Msa1315100:intron | 40.0% | |
| !! | TTGTTTGAGTTGGGACTATG+AGG | - | chr8_4:14366894-14366913 | None:intergenic | 40.0% |
| GTCTGTGACATTGTTTGAGT+TGG | - | chr8_4:14366904-14366923 | None:intergenic | 40.0% | |
| CATTGCAAACTTGCAACGAT+GGG | - | chr8_4:14366944-14366963 | None:intergenic | 40.0% | |
| TCATTGCAAACTTGCAACGA+TGG | - | chr8_4:14366945-14366964 | None:intergenic | 40.0% | |
| AGAGCTAGGTTTCAACTCAT+CGG | - | chr8_4:14367002-14367021 | None:intergenic | 40.0% | |
| CTAAATTTAGCTACAACGGG+AGG | + | chr8_4:14367028-14367047 | Msa1315100:intron | 40.0% | |
| TGTTCTGGTCTGTTCTATTG+TGG | + | chr8_4:14367219-14367238 | Msa1315100:intron | 40.0% | |
| GATCTAGTATGGGTTTAAGC+TGG | + | chr8_4:14367245-14367264 | Msa1315100:intron | 40.0% | |
| TAGCTCGATATGTACCTACT+TGG | + | chr8_4:14367732-14367751 | Msa1315100:CDS | 40.0% | |
| GATATGTACCTACTTGGAGA+GGG | + | chr8_4:14367738-14367757 | Msa1315100:CDS | 40.0% | |
| ATGAATCCATCACGTGTTCT+TGG | + | chr8_4:14367785-14367804 | Msa1315100:CDS | 40.0% | |
| ! | TCTTTTTCTGTCAATGCCGA+GGG | + | chr8_4:14367812-14367831 | Msa1315100:CDS | 40.0% |
| ! | AGTTCAAGTCTGAAATCACC+TGG | - | chr8_4:14367863-14367882 | None:intergenic | 40.0% |
| CAAGTGGTATGGTGTAACAA+TGG | + | chr8_4:14368249-14368268 | Msa1315100:three_prime_UTR | 40.0% | |
| ! | ATGGTGTAACAATGGTGGAA+AGG | + | chr8_4:14368257-14368276 | Msa1315100:three_prime_UTR | 40.0% |
| TAGCTTCGAGAAGTCGAAAA+TGG | - | chr8_4:14368321-14368340 | None:intergenic | 40.0% | |
| ! | ATTTTCGACTTCTCGAAGCT+AGG | + | chr8_4:14368320-14368339 | Msa1315100:three_prime_UTR | 40.0% |
| GAGGGTGAGTAAAGTTAAGT+TGG | - | chr8_4:14368365-14368384 | None:intergenic | 40.0% | |
| ! | CTCTGGGAATCTTTCTCTTG+AGG | + | chr8_4:14364541-14364560 | Msa1315100:CDS | 45.0% |
| ! | AGGTTACTCAAGGTGCTAAG+TGG | + | chr8_4:14364561-14364580 | Msa1315100:CDS | 45.0% |
| TTGTGGAATGCGCTCCAAAA+AGG | + | chr8_4:14364604-14364623 | Msa1315100:CDS | 45.0% | |
| AGGAGATGTGAGACTCTATG+GGG | - | chr8_4:14365207-14365226 | None:intergenic | 45.0% | |
| GAGAATTGGGTTAACTCACC+TGG | + | chr8_4:14365596-14365615 | Msa1315100:CDS | 45.0% | |
| !!! | CATTCATCTGGTTGGCCTTT+TGG | - | chr8_4:14366970-14366989 | None:intergenic | 45.0% |
| GTTGGGTTCATTCATCTGGT+TGG | - | chr8_4:14366978-14366997 | None:intergenic | 45.0% | |
| GGTTTCAACTCATCGGAGTT+GGG | - | chr8_4:14366995-14367014 | None:intergenic | 45.0% | |
| AGGTTTCAACTCATCGGAGT+TGG | - | chr8_4:14366996-14367015 | None:intergenic | 45.0% | |
| GTATGGGTTTAAGCTGGATC+TGG | + | chr8_4:14367251-14367270 | Msa1315100:intron | 45.0% | |
| !!! | TGCTTGGTTTTGTGCCTTGT+TGG | + | chr8_4:14367556-14367575 | Msa1315100:intron | 45.0% |
| AGTGAAGGGATGGGTATCAT+TGG | + | chr8_4:14367596-14367615 | Msa1315100:intron | 45.0% | |
| CATATCGAGCTAGAGGAATC+TGG | - | chr8_4:14367724-14367743 | None:intergenic | 45.0% | |
| GTAGGTACATATCGAGCTAG+AGG | - | chr8_4:14367731-14367750 | None:intergenic | 45.0% | |
| CGATATGTACCTACTTGGAG+AGG | + | chr8_4:14367737-14367756 | Msa1315100:CDS | 45.0% | |
| ATAACGTTCCCTCTCCAAGT+AGG | - | chr8_4:14367749-14367768 | None:intergenic | 45.0% | |
| ! | GTCTTTTTCTGTCAATGCCG+AGG | + | chr8_4:14367811-14367830 | Msa1315100:CDS | 45.0% |
| CATTGGGTTCTCACTTCTCA+TGG | - | chr8_4:14367900-14367919 | None:intergenic | 45.0% | |
| GTGGTATGGTGTAACAATGG+TGG | + | chr8_4:14368252-14368271 | Msa1315100:three_prime_UTR | 45.0% | |
| !!! | TTTTTTGTGCACATGCGAGG+TGG | - | chr8_4:14368393-14368412 | None:intergenic | 45.0% |
| TGGAATGCGCTCCAAAAAGG+TGG | + | chr8_4:14364607-14364626 | Msa1315100:intron | 50.0% | |
| GGAGATGTGAGACTCTATGG+GGG | - | chr8_4:14365206-14365225 | None:intergenic | 50.0% | |
| GGTTAACTCACCTGGACAGA+TGG | + | chr8_4:14365604-14365623 | Msa1315100:CDS | 50.0% | |
| TAACTCACCTGGACAGATGG+AGG | + | chr8_4:14365607-14365626 | Msa1315100:CDS | 50.0% | |
| GACAGATGGAGGACAACTCA+TGG | + | chr8_4:14365618-14365637 | Msa1315100:CDS | 50.0% | |
| ACTAGCTGACGCAGTTGCAA+TGG | + | chr8_4:14365883-14365902 | Msa1315100:intron | 50.0% | |
| CTCAAAGTTCAAGCCCGTCA+AGG | - | chr8_4:14366390-14366409 | None:intergenic | 50.0% | |
| CGGAGTTGGGTTCATTCATC+TGG | - | chr8_4:14366982-14367001 | None:intergenic | 50.0% | |
| ACTAAAGAGCGACGGATGAC+TGG | - | chr8_4:14367062-14367081 | None:intergenic | 50.0% | |
| TTTAAGCTGGATCTGGCCTC+AGG | + | chr8_4:14367258-14367277 | Msa1315100:CDS | 50.0% | |
| ATCTGGCCTCAGGTGATTTG+TGG | + | chr8_4:14367268-14367287 | Msa1315100:CDS | 50.0% | |
| ACACCACCACAAATCACCTG+AGG | - | chr8_4:14367277-14367296 | None:intergenic | 50.0% | |
| ! | TCAGGTGATTTGTGGTGGTG+TGG | + | chr8_4:14367276-14367295 | Msa1315100:CDS | 50.0% |
| ! | CAGGTGATTTGTGGTGGTGT+GGG | + | chr8_4:14367277-14367296 | Msa1315100:CDS | 50.0% |
| ! | AGGTGATTTGTGGTGGTGTG+GGG | + | chr8_4:14367278-14367297 | Msa1315100:CDS | 50.0% |
| GACATGCCAAGAACACGTGA+TGG | - | chr8_4:14367794-14367813 | None:intergenic | 50.0% | |
| ! | TTTTCTGTCAATGCCGAGGG+TGG | + | chr8_4:14367815-14367834 | Msa1315100:CDS | 50.0% |
| GAGTTGTCCTCCATCTGTCC+AGG | - | chr8_4:14365617-14365636 | None:intergenic | 55.0% | |
| CTGCGTCAGCTAGTAGAGAC+TGG | - | chr8_4:14365877-14365896 | None:intergenic | 55.0% | |
| ! | TGGCCTCAGGTGATTTGTGG+TGG | + | chr8_4:14367271-14367290 | Msa1315100:CDS | 55.0% |
| ! | TGATTTGTGGTGGTGTGGGG+TGG | + | chr8_4:14367281-14367300 | Msa1315100:CDS | 55.0% |
| CTGGTCCAGATCTAGCACCT+GGG | - | chr8_4:14367844-14367863 | None:intergenic | 55.0% | |
| !! | ACATGCGAGGTGGCTTTGGA+GGG | - | chr8_4:14368383-14368402 | None:intergenic | 55.0% |
| GAGCGACGGATGACTGGACT+GGG | - | chr8_4:14367056-14367075 | None:intergenic | 60.0% | |
| AGAGCGACGGATGACTGGAC+TGG | - | chr8_4:14367057-14367076 | None:intergenic | 60.0% | |
| GGTGTCCCAGGTGCTAGATC+TGG | + | chr8_4:14367836-14367855 | Msa1315100:CDS | 60.0% | |
| CCTGGTCCAGATCTAGCACC+TGG | - | chr8_4:14367845-14367864 | None:intergenic | 60.0% | |
| CCAGGTGCTAGATCTGGACC+AGG | + | chr8_4:14367842-14367861 | Msa1315100:CDS | 60.0% | |
| !! | CACATGCGAGGTGGCTTTGG+AGG | - | chr8_4:14368384-14368403 | None:intergenic | 60.0% |
| GTGCACATGCGAGGTGGCTT+TGG | - | chr8_4:14368387-14368406 | None:intergenic | 60.0% | |
| ! | TGTGGTGGTGTGGGGTGGTG+CGG | + | chr8_4:14367286-14367305 | Msa1315100:CDS | 65.0% |
| TGGTGTGGGGTGGTGCGGTA+CGG | + | chr8_4:14367291-14367310 | Msa1315100:CDS | 65.0% | |
| AATGCCGAGGGTGGTGTCCC+AGG | + | chr8_4:14367824-14367843 | Msa1315100:CDS | 65.0% | |
| AGCACCTGGGACACCACCCT+CGG | - | chr8_4:14367831-14367850 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 14364285 | 14368537 | 14364285 | ID=Msa1315100;Name=Msa1315100 |
| chr8_4 | mRNA | 14364285 | 14368537 | 14364285 | ID=Msa1315100-mRNA-1;Parent=Msa1315100;Name=Msa1315100-mRNA-1;_AED=0.12;_eAED=0.12;_QI=8|0.66|0.71|0.85|0.83|0.71|7|570|220 |
| chr8_4 | exon | 14364285 | 14364380 | 14364285 | ID=Msa1315100-mRNA-1:exon:5406;Parent=Msa1315100-mRNA-1 |
| chr8_4 | exon | 14364480 | 14364625 | 14364480 | ID=Msa1315100-mRNA-1:exon:5407;Parent=Msa1315100-mRNA-1 |
| chr8_4 | exon | 14365392 | 14365472 | 14365392 | ID=Msa1315100-mRNA-1:exon:5408;Parent=Msa1315100-mRNA-1 |
| chr8_4 | exon | 14365587 | 14365672 | 14365587 | ID=Msa1315100-mRNA-1:exon:5409;Parent=Msa1315100-mRNA-1 |
| chr8_4 | exon | 14367252 | 14367312 | 14367252 | ID=Msa1315100-mRNA-1:exon:5410;Parent=Msa1315100-mRNA-1 |
| chr8_4 | exon | 14367725 | 14368130 | 14367725 | ID=Msa1315100-mRNA-1:exon:5411;Parent=Msa1315100-mRNA-1 |
| chr8_4 | exon | 14368173 | 14368537 | 14368173 | ID=Msa1315100-mRNA-1:exon:5412;Parent=Msa1315100-mRNA-1 |
| chr8_4 | five_prime_UTR | 14364285 | 14364292 | 14364285 | ID=Msa1315100-mRNA-1:five_prime_utr;Parent=Msa1315100-mRNA-1 |
| chr8_4 | CDS | 14364293 | 14364380 | 14364293 | ID=Msa1315100-mRNA-1:cds;Parent=Msa1315100-mRNA-1 |
| chr8_4 | CDS | 14364480 | 14364625 | 14364480 | ID=Msa1315100-mRNA-1:cds;Parent=Msa1315100-mRNA-1 |
| chr8_4 | CDS | 14365392 | 14365472 | 14365392 | ID=Msa1315100-mRNA-1:cds;Parent=Msa1315100-mRNA-1 |
| chr8_4 | CDS | 14365587 | 14365672 | 14365587 | ID=Msa1315100-mRNA-1:cds;Parent=Msa1315100-mRNA-1 |
| chr8_4 | CDS | 14367252 | 14367312 | 14367252 | ID=Msa1315100-mRNA-1:cds;Parent=Msa1315100-mRNA-1 |
| chr8_4 | CDS | 14367725 | 14367925 | 14367725 | ID=Msa1315100-mRNA-1:cds;Parent=Msa1315100-mRNA-1 |
| chr8_4 | three_prime_UTR | 14367926 | 14368130 | 14367926 | ID=Msa1315100-mRNA-1:three_prime_utr;Parent=Msa1315100-mRNA-1 |
| chr8_4 | three_prime_UTR | 14368173 | 14368537 | 14368173 | ID=Msa1315100-mRNA-1:three_prime_utr;Parent=Msa1315100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
