Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806920 | XP_003610652.2 | 87.288 | 236 | 0 | 1 | 1 | 236 | 1 | 206 | 4.65e-143 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806920 | sp|O81098|RPB5A_ARATH | 66.809 | 235 | 48 | 1 | 2 | 236 | 1 | 205 | 1.18e-110 | 319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806920 | G7K102 | 87.288 | 236 | 0 | 1 | 1 | 236 | 1 | 206 | 2.22e-143 | 408 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa0806920 | 0.800972 | 1.121554e-48 | -8.615850e-47 |
| Msa0004950 | Msa0806920 | 0.807441 | 5.047815e-50 | -8.615850e-47 |
| Msa0004980 | Msa0806920 | 0.811724 | 6.066437e-51 | -8.615850e-47 |
| Msa0006880 | Msa0806920 | 0.870596 | 1.294844e-66 | -8.615850e-47 |
| Msa0008090 | Msa0806920 | 0.815807 | 7.650865e-52 | -8.615850e-47 |
| Msa0026660 | Msa0806920 | 0.806677 | 7.323462e-50 | -8.615850e-47 |
| Msa0027260 | Msa0806920 | 0.804453 | 2.144732e-49 | -8.615850e-47 |
| Msa0027580 | Msa0806920 | 0.811361 | 7.275489e-51 | -8.615850e-47 |
| Msa0029260 | Msa0806920 | 0.845424 | 4.095903e-59 | -8.615850e-47 |
| Msa0030380 | Msa0806920 | 0.810594 | 1.066508e-50 | -8.615850e-47 |
| Msa0031510 | Msa0806920 | 0.800063 | 1.717671e-48 | -8.615850e-47 |
| Msa0032260 | Msa0806920 | 0.858174 | 9.873993e-63 | -8.615850e-47 |
| Msa0047160 | Msa0806920 | 0.805405 | 1.356123e-49 | -8.615850e-47 |
| Msa0048180 | Msa0806920 | 0.811139 | 8.127395e-51 | -8.615850e-47 |
| Msa0052300 | Msa0806920 | -0.834983 | 2.185338e-56 | -8.615850e-47 |
| Msa0052350 | Msa0806920 | -0.847662 | 1.003269e-59 | -8.615850e-47 |
| Msa0055150 | Msa0806920 | 0.870945 | 9.943395e-67 | -8.615850e-47 |
| Msa0057140 | Msa0806920 | 0.844145 | 9.063754e-59 | -8.615850e-47 |
| Msa0061970 | Msa0806920 | 0.840390 | 8.948645e-58 | -8.615850e-47 |
| Msa0064350 | Msa0806920 | 0.820044 | 8.445074e-53 | -8.615850e-47 |
| Msa0068760 | Msa0806920 | 0.826196 | 3.097576e-54 | -8.615850e-47 |
| Msa0073480 | Msa0806920 | 0.823549 | 1.305013e-53 | -8.615850e-47 |
| Msa0074320 | Msa0806920 | 0.803909 | 2.783374e-49 | -8.615850e-47 |
| Msa0075340 | Msa0806920 | 0.811847 | 5.703887e-51 | -8.615850e-47 |
| Msa0076000 | Msa0806920 | 0.805265 | 1.451151e-49 | -8.615850e-47 |
| Msa0082280 | Msa0806920 | 0.812889 | 3.378246e-51 | -8.615850e-47 |
| Msa0087290 | Msa0806920 | 0.808817 | 2.569809e-50 | -8.615850e-47 |
| Msa0090030 | Msa0806920 | 0.824331 | 8.553313e-54 | -8.615850e-47 |
| Msa0091570 | Msa0806920 | 0.815845 | 7.503855e-52 | -8.615850e-47 |
| Msa0094920 | Msa0806920 | 0.852803 | 3.630962e-61 | -8.615850e-47 |
| Msa0094950 | Msa0806920 | 0.826275 | 2.967164e-54 | -8.615850e-47 |
| Msa0097360 | Msa0806920 | -0.823487 | 1.348956e-53 | -8.615850e-47 |
| Msa0099510 | Msa0806920 | 0.803847 | 2.867256e-49 | -8.615850e-47 |
| Msa0100800 | Msa0806920 | 0.809852 | 1.541464e-50 | -8.615850e-47 |
| Msa0101180 | Msa0806920 | 0.817087 | 3.956065e-52 | -8.615850e-47 |
| Msa0111330 | Msa0806920 | 0.800168 | 1.635746e-48 | -8.615850e-47 |
| Msa0115390 | Msa0806920 | 0.816371 | 5.723727e-52 | -8.615850e-47 |
| Msa0603570 | Msa0806920 | 0.825228 | 5.256587e-54 | -8.615850e-47 |
| Msa0607510 | Msa0806920 | 0.820798 | 5.669398e-53 | -8.615850e-47 |
| Msa0609000 | Msa0806920 | 0.832234 | 1.061860e-55 | -8.615850e-47 |
| Msa0610390 | Msa0806920 | 0.858217 | 9.583308e-63 | -8.615850e-47 |
| Msa0614990 | Msa0806920 | 0.821512 | 3.882202e-53 | -8.615850e-47 |
| Msa0618930 | Msa0806920 | 0.809574 | 1.769551e-50 | -8.615850e-47 |
| Msa0619070 | Msa0806920 | 0.821334 | 4.266819e-53 | -8.615850e-47 |
| Msa0623700 | Msa0806920 | 0.820978 | 5.153475e-53 | -8.615850e-47 |
| Msa0627910 | Msa0806920 | 0.806602 | 7.594234e-50 | -8.615850e-47 |
| Msa0631350 | Msa0806920 | 0.830515 | 2.812613e-55 | -8.615850e-47 |
| Msa0647490 | Msa0806920 | 0.803608 | 3.214475e-49 | -8.615850e-47 |
| Msa0650920 | Msa0806920 | 0.854765 | 9.900096e-62 | -8.615850e-47 |
| Msa0654870 | Msa0806920 | 0.810105 | 1.359648e-50 | -8.615850e-47 |
| Msa0659140 | Msa0806920 | 0.854338 | 1.315500e-61 | -8.615850e-47 |
| Msa0661090 | Msa0806920 | 0.809761 | 1.612989e-50 | -8.615850e-47 |
| Msa0661300 | Msa0806920 | 0.801412 | 9.114071e-49 | -8.615850e-47 |
| Msa0663900 | Msa0806920 | 0.830661 | 2.589926e-55 | -8.615850e-47 |
| Msa0666230 | Msa0806920 | 0.819049 | 1.424357e-52 | -8.615850e-47 |
| Msa0669720 | Msa0806920 | 0.813695 | 2.247177e-51 | -8.615850e-47 |
| Msa0669760 | Msa0806920 | 0.814963 | 1.178787e-51 | -8.615850e-47 |
| Msa0669850 | Msa0806920 | 0.808768 | 2.632559e-50 | -8.615850e-47 |
| Msa0670270 | Msa0806920 | 0.809930 | 1.482879e-50 | -8.615850e-47 |
| Msa0680240 | Msa0806920 | 0.841058 | 5.981962e-58 | -8.615850e-47 |
| Msa0682780 | Msa0806920 | 0.838252 | 3.211413e-57 | -8.615850e-47 |
| Msa0687630 | Msa0806920 | 0.872600 | 2.808655e-67 | -8.615850e-47 |
| Msa0689500 | Msa0806920 | 0.812200 | 4.778717e-51 | -8.615850e-47 |
| Msa0690250 | Msa0806920 | 0.814483 | 1.505888e-51 | -8.615850e-47 |
| Msa0691900 | Msa0806920 | 0.830739 | 2.478385e-55 | -8.615850e-47 |
| Msa0692840 | Msa0806920 | 0.803644 | 3.158876e-49 | -8.615850e-47 |
| Msa0692940 | Msa0806920 | 0.851802 | 6.998654e-61 | -8.615850e-47 |
| Msa0694840 | Msa0806920 | 0.823172 | 1.597929e-53 | -8.615850e-47 |
| Msa0703230 | Msa0806920 | 0.802078 | 6.653903e-49 | -8.615850e-47 |
| Msa0705600 | Msa0806920 | 0.866273 | 3.215968e-65 | -8.615850e-47 |
| Msa0706960 | Msa0806920 | 0.813723 | 2.216000e-51 | -8.615850e-47 |
| Msa0707390 | Msa0806920 | 0.834177 | 3.484178e-56 | -8.615850e-47 |
| Msa0711490 | Msa0806920 | 0.855621 | 5.579740e-62 | -8.615850e-47 |
| Msa0718740 | Msa0806920 | 0.841818 | 3.773704e-58 | -8.615850e-47 |
| Msa0719420 | Msa0806920 | 0.810511 | 1.111541e-50 | -8.615850e-47 |
| Msa0733480 | Msa0806920 | 0.813538 | 2.432739e-51 | -8.615850e-47 |
| Msa0735310 | Msa0806920 | 0.826460 | 2.680923e-54 | -8.615850e-47 |
| Msa0743260 | Msa0806920 | 0.808693 | 2.732782e-50 | -8.615850e-47 |
| Msa0747700 | Msa0806920 | 0.809563 | 1.778851e-50 | -8.615850e-47 |
| Msa0750920 | Msa0806920 | 0.808370 | 3.202502e-50 | -8.615850e-47 |
| Msa0774540 | Msa0806920 | 0.807026 | 6.179768e-50 | -8.615850e-47 |
| Msa0785130 | Msa0806920 | 0.804717 | 1.888847e-49 | -8.615850e-47 |
| Msa0789680 | Msa0806920 | 0.813180 | 2.916519e-51 | -8.615850e-47 |
| Msa0790850 | Msa0806920 | 0.802281 | 6.043708e-49 | -8.615850e-47 |
| Msa0791820 | Msa0806920 | 0.803690 | 3.091159e-49 | -8.615850e-47 |
| Msa0793390 | Msa0806920 | 0.820623 | 6.221032e-53 | -8.615850e-47 |
| Msa0797750 | Msa0806920 | 0.828111 | 1.078230e-54 | -8.615850e-47 |
| Msa0798440 | Msa0806920 | 0.815411 | 9.374281e-52 | -8.615850e-47 |
| Msa0802410 | Msa0806920 | 0.808431 | 3.107252e-50 | -8.615850e-47 |
| Msa0805500 | Msa0806920 | 0.836530 | 8.868060e-57 | -8.615850e-47 |
| Msa0806920 | Msa0813720 | 0.807206 | 5.661029e-50 | -8.615850e-47 |
| Msa0806920 | Msa0814250 | 0.829891 | 3.994402e-55 | -8.615850e-47 |
| Msa0806920 | Msa0814320 | 0.805332 | 1.404658e-49 | -8.615850e-47 |
| Msa0806920 | Msa0819060 | 0.818653 | 1.752102e-52 | -8.615850e-47 |
| Msa0806920 | Msa0823090 | 0.806429 | 8.261759e-50 | -8.615850e-47 |
| Msa0806920 | Msa0824640 | 0.817780 | 2.761862e-52 | -8.615850e-47 |
| Msa0806920 | Msa0831870 | 0.897106 | 1.938590e-76 | -8.615850e-47 |
| Msa0806920 | Msa0833310 | 0.805485 | 1.305068e-49 | -8.615850e-47 |
| Msa0806920 | Msa0835420 | 0.805792 | 1.125133e-49 | -8.615850e-47 |
| Msa0806920 | Msa0837660 | 0.816017 | 6.867215e-52 | -8.615850e-47 |
| Msa0806920 | Msa0842830 | 0.837259 | 5.774973e-57 | -8.615850e-47 |
| Msa0806920 | Msa0847080 | 0.802010 | 6.872595e-49 | -8.615850e-47 |
| Msa0806920 | Msa0852390 | 0.809999 | 1.433199e-50 | -8.615850e-47 |
| Msa0806920 | Msa0855010 | 0.819626 | 1.051925e-52 | -8.615850e-47 |
| Msa0806920 | Msa0864010 | 0.813518 | 2.458052e-51 | -8.615850e-47 |
| Msa0806920 | Msa0874500 | 0.818858 | 1.573990e-52 | -8.615850e-47 |
| Msa0806920 | Msa0874570 | 0.821565 | 3.772943e-53 | -8.615850e-47 |
| Msa0806920 | Msa0898890 | 0.802617 | 5.153951e-49 | -8.615850e-47 |
| Msa0806920 | Msa0899240 | -0.825366 | 4.874514e-54 | -8.615850e-47 |
| Msa0806920 | Msa0900630 | 0.807020 | 6.197053e-50 | -8.615850e-47 |
| Msa0806920 | Msa0924150 | -0.801661 | 8.105391e-49 | -8.615850e-47 |
| Msa0806920 | Msa0933290 | 0.810832 | 9.476020e-51 | -8.615850e-47 |
| Msa0806920 | Msa0960830 | 0.840383 | 8.989444e-58 | -8.615850e-47 |
| Msa0806920 | Msa0963020 | 0.805633 | 1.215083e-49 | -8.615850e-47 |
| Msa0806920 | Msa0966270 | 0.825573 | 4.355286e-54 | -8.615850e-47 |
| Msa0806920 | Msa0966720 | -0.818812 | 1.612268e-52 | -8.615850e-47 |
| Msa0806920 | Msa0970520 | 0.802342 | 5.871211e-49 | -8.615850e-47 |
| Msa0806920 | Msa0974810 | 0.836709 | 7.982144e-57 | -8.615850e-47 |
| Msa0806920 | Msa0994290 | 0.843634 | 1.241789e-58 | -8.615850e-47 |
| Msa0806920 | Msa1014420 | 0.808075 | 3.700332e-50 | -8.615850e-47 |
| Msa0806920 | Msa1019240 | 0.845766 | 3.309854e-59 | -8.615850e-47 |
| Msa0806920 | Msa1019260 | 0.841223 | 5.413594e-58 | -8.615850e-47 |
| Msa0806920 | Msa1025260 | 0.800981 | 1.116911e-48 | -8.615850e-47 |
| Msa0806920 | Msa1025940 | 0.836150 | 1.107811e-56 | -8.615850e-47 |
| Msa0806920 | Msa1029970 | 0.811900 | 5.554594e-51 | -8.615850e-47 |
| Msa0806920 | Msa1036550 | 0.809075 | 2.263360e-50 | -8.615850e-47 |
| Msa0806920 | Msa1040890 | 0.809592 | 1.753860e-50 | -8.615850e-47 |
| Msa0806920 | Msa1069660 | -0.810511 | 1.111605e-50 | -8.615850e-47 |
| Msa0806920 | Msa1073400 | 0.845416 | 4.118481e-59 | -8.615850e-47 |
| Msa0806920 | Msa1081150 | 0.828667 | 7.914746e-55 | -8.615850e-47 |
| Msa0806920 | Msa1082700 | 0.818074 | 2.369664e-52 | -8.615850e-47 |
| Msa0806920 | Msa1083880 | 0.806800 | 6.897987e-50 | -8.615850e-47 |
| Msa0806920 | Msa1084470 | 0.820405 | 6.980207e-53 | -8.615850e-47 |
| Msa0806920 | Msa1089840 | 0.882588 | 9.182300e-71 | -8.615850e-47 |
| Msa0806920 | Msa1093330 | 0.816326 | 5.857611e-52 | -8.615850e-47 |
| Msa0806920 | Msa1094430 | 0.826506 | 2.613894e-54 | -8.615850e-47 |
| Msa0806920 | Msa1096230 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa0806920 | Msa1104140 | 0.820199 | 7.782727e-53 | -8.615850e-47 |
| Msa0806920 | Msa1104210 | 0.841276 | 5.242931e-58 | -8.615850e-47 |
| Msa0806920 | Msa1108820 | 0.816450 | 5.497267e-52 | -8.615850e-47 |
| Msa0806920 | Msa1109570 | 0.802521 | 5.393592e-49 | -8.615850e-47 |
| Msa0806920 | Msa1120810 | 0.802851 | 4.610932e-49 | -8.615850e-47 |
| Msa0806920 | Msa1122820 | 0.815798 | 7.685575e-52 | -8.615850e-47 |
| Msa0806920 | Msa1125500 | 0.807671 | 4.510340e-50 | -8.615850e-47 |
| Msa0806920 | Msa1126470 | 0.808834 | 2.549287e-50 | -8.615850e-47 |
| Msa0806920 | Msa1126510 | 0.830654 | 2.600899e-55 | -8.615850e-47 |
| Msa0806920 | Msa1126770 | 0.832664 | 8.306656e-56 | -8.615850e-47 |
| Msa0806920 | Msa1126850 | 0.807478 | 4.956817e-50 | -8.615850e-47 |
| Msa0806920 | Msa1127830 | 0.822228 | 2.650718e-53 | -8.615850e-47 |
| Msa0806920 | Msa1131170 | 0.829525 | 4.903131e-55 | -8.615850e-47 |
| Msa0806920 | Msa1134110 | 0.803840 | 2.877432e-49 | -8.615850e-47 |
| Msa0806920 | Msa1135800 | -0.801146 | 1.033448e-48 | -8.615850e-47 |
| Msa0806920 | Msa1138870 | 0.820389 | 7.039759e-53 | -8.615850e-47 |
| Msa0806920 | Msa1143840 | 0.827981 | 1.158758e-54 | -8.615850e-47 |
| Msa0806920 | Msa1160360 | 0.808598 | 2.863109e-50 | -8.615850e-47 |
| Msa0806920 | Msa1165870 | 0.813951 | 1.973886e-51 | -8.615850e-47 |
| Msa0806920 | Msa1166010 | 0.848880 | 4.621883e-60 | -8.615850e-47 |
| Msa0806920 | Msa1166330 | 0.810565 | 1.082060e-50 | -8.615850e-47 |
| Msa0806920 | Msa1166340 | 0.814532 | 1.468319e-51 | -8.615850e-47 |
| Msa0806920 | Msa1166860 | 0.840797 | 7.001988e-58 | -8.615850e-47 |
| Msa0806920 | Msa1166870 | 0.862140 | 6.258148e-64 | -8.615850e-47 |
| Msa0806920 | Msa1171870 | 0.808748 | 2.659647e-50 | -8.615850e-47 |
| Msa0806920 | Msa1179950 | 0.837353 | 5.463893e-57 | -8.615850e-47 |
| Msa0806920 | Msa1179980 | 0.842183 | 3.020355e-58 | -8.615850e-47 |
| Msa0806920 | Msa1182610 | 0.812450 | 4.212960e-51 | -8.615850e-47 |
| Msa0806920 | Msa1184370 | 0.863351 | 2.648634e-64 | -8.615850e-47 |
| Msa0806920 | Msa1193950 | -0.818101 | 2.336177e-52 | -8.615850e-47 |
| Msa0806920 | Msa1201830 | 0.820143 | 8.016590e-53 | -8.615850e-47 |
| Msa0806920 | Msa1203880 | 0.809466 | 1.866554e-50 | -8.615850e-47 |
| Msa0806920 | Msa1227690 | 0.857263 | 1.838416e-62 | -8.615850e-47 |
| Msa0806920 | Msa1234980 | 0.866340 | 3.062586e-65 | -8.615850e-47 |
| Msa0806920 | Msa1237940 | 0.818148 | 2.280419e-52 | -8.615850e-47 |
| Msa0806920 | Msa1246530 | -0.809029 | 2.315967e-50 | -8.615850e-47 |
| Msa0806920 | Msa1254710 | 0.824567 | 7.528488e-54 | -8.615850e-47 |
| Msa0806920 | Msa1257510 | 0.825421 | 4.730056e-54 | -8.615850e-47 |
| Msa0806920 | Msa1260130 | 0.822871 | 1.878210e-53 | -8.615850e-47 |
| Msa0806920 | Msa1267260 | 0.811044 | 8.525062e-51 | -8.615850e-47 |
| Msa0806920 | Msa1269300 | 0.884098 | 2.561422e-71 | -8.615850e-47 |
| Msa0806920 | Msa1270620 | 0.843015 | 1.816724e-58 | -8.615850e-47 |
| Msa0806920 | Msa1270690 | 0.844701 | 6.421270e-59 | -8.615850e-47 |
| Msa0806920 | Msa1272460 | 0.841101 | 5.829015e-58 | -8.615850e-47 |
| Msa0806920 | Msa1276930 | 0.811051 | 8.494714e-51 | -8.615850e-47 |
| Msa0806920 | Msa1281190 | 0.828857 | 7.118425e-55 | -8.615850e-47 |
| Msa0806920 | Msa1282240 | 0.828506 | 8.656346e-55 | -8.615850e-47 |
| Msa0806920 | Msa1294840 | 0.823489 | 1.347934e-53 | -8.615850e-47 |
| Msa0806920 | Msa1295110 | 0.811960 | 5.391485e-51 | -8.615850e-47 |
| Msa0806920 | Msa1295490 | -0.800200 | 1.611491e-48 | -8.615850e-47 |
| Msa0806920 | Msa1296830 | 0.834934 | 2.248509e-56 | -8.615850e-47 |
| Msa0806920 | Msa1304820 | 0.830857 | 2.318195e-55 | -8.615850e-47 |
| Msa0806920 | Msa1306430 | 0.811320 | 7.427701e-51 | -8.615850e-47 |
| Msa0806920 | Msa1306990 | 0.830805 | 2.388464e-55 | -8.615850e-47 |
| Msa0806920 | Msa1307950 | 0.811302 | 7.493944e-51 | -8.615850e-47 |
| Msa0806920 | Msa1310690 | 0.862359 | 5.359248e-64 | -8.615850e-47 |
| Msa0806920 | Msa1315100 | 0.802153 | 6.423139e-49 | -8.615850e-47 |
| Msa0806920 | Msa1316830 | 0.808716 | 2.701451e-50 | -8.615850e-47 |
| Msa0806920 | Msa1320390 | 0.815166 | 1.062621e-51 | -8.615850e-47 |
| Msa0806920 | Msa1323880 | 0.809030 | 2.314619e-50 | -8.615850e-47 |
| Msa0806920 | Msa1329540 | 0.805997 | 1.018709e-49 | -8.615850e-47 |
| Msa0806920 | Msa1331710 | 0.816739 | 4.735129e-52 | -8.615850e-47 |
| Msa0806920 | Msa1335940 | 0.850951 | 1.217892e-60 | -8.615850e-47 |
| Msa0806920 | Msa1343290 | 0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0806920 | Msa1344850 | 0.808329 | 3.266595e-50 | -8.615850e-47 |
| Msa0806920 | Msa1345040 | 0.823784 | 1.149273e-53 | -8.615850e-47 |
| Msa0806920 | Msa1345450 | 0.823055 | 1.701782e-53 | -8.615850e-47 |
| Msa0806920 | Msa1349570 | 0.828653 | 7.975055e-55 | -8.615850e-47 |
| Msa0806920 | Msa1355700 | 0.816063 | 6.708626e-52 | -8.615850e-47 |
| Msa0806920 | Msa1363330 | 0.834543 | 2.821244e-56 | -8.615850e-47 |
| Msa0806920 | Msa1363860 | 0.818541 | 1.857328e-52 | -8.615850e-47 |
| Msa0806920 | Msa1364910 | 0.822090 | 2.852333e-53 | -8.615850e-47 |
| Msa0806920 | Msa1365150 | 0.809703 | 1.659967e-50 | -8.615850e-47 |
| Msa0806920 | Msa1365860 | 0.845572 | 3.736149e-59 | -8.615850e-47 |
| Msa0806920 | Msa1367880 | 0.800939 | 1.138938e-48 | -8.615850e-47 |
| Msa0806920 | Msa1369190 | 0.840306 | 9.414813e-58 | -8.615850e-47 |
| Msa0806920 | Msa1370860 | 0.827595 | 1.434099e-54 | -8.615850e-47 |
| Msa0806920 | Msa1371090 | 0.827166 | 1.817770e-54 | -8.615850e-47 |
| Msa0806920 | Msa1375990 | 0.802125 | 6.506569e-49 | -8.615850e-47 |
| Msa0806920 | Msa1379760 | 0.825350 | 4.918197e-54 | -8.615850e-47 |
| Msa0806920 | Msa1386600 | 0.835447 | 1.669315e-56 | -8.615850e-47 |
| Msa0806920 | Msa1393740 | 0.804167 | 2.459920e-49 | -8.615850e-47 |
| Msa0806920 | Msa1397810 | 0.824782 | 6.698473e-54 | -8.615850e-47 |
| Msa0806920 | Msa1397940 | 0.803574 | 3.266336e-49 | -8.615850e-47 |
| Msa0806920 | Msa1403930 | -0.809012 | 2.334736e-50 | -8.615850e-47 |
| Msa0806920 | Msa1404010 | 0.807519 | 4.857578e-50 | -8.615850e-47 |
| Msa0806920 | Msa1404190 | 0.867164 | 1.674613e-65 | -8.615850e-47 |
| Msa0806920 | Msa1408150 | 0.832977 | 6.946212e-56 | -8.615850e-47 |
| Msa0806920 | Msa1413500 | 0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0806920 | Msa1418960 | -0.839424 | 1.597594e-57 | -8.615850e-47 |
| Msa0806920 | Msa1423910 | 0.800505 | 1.396912e-48 | -8.615850e-47 |
| Msa0806920 | Msa1426920 | 0.803157 | 3.985856e-49 | -8.615850e-47 |
| Msa0806920 | Msa1435750 | 0.825692 | 4.079928e-54 | -8.615850e-47 |
| Msa0806920 | Msa1438640 | 0.817794 | 2.741011e-52 | -8.615850e-47 |
| Msa0806920 | Msa1442850 | 0.858024 | 1.094373e-62 | -8.615850e-47 |
| Msa0806920 | Msa1444310 | 0.812979 | 3.227665e-51 | -8.615850e-47 |
| Msa0806920 | Msa1448690 | 0.807068 | 6.054759e-50 | -8.615850e-47 |
| Msa0806920 | Msa1450280 | 0.842950 | 1.890975e-58 | -8.615850e-47 |
| Msa0806920 | Msa1452470 | 0.815998 | 6.934232e-52 | -8.615850e-47 |
| Msa0806920 | Msa1456050 | 0.809066 | 2.273221e-50 | -8.615850e-47 |
| Msa0806920 | Msa1461280 | 0.812281 | 4.586668e-51 | -8.615850e-47 |
| Msa0806920 | Msa1461490 | 0.806418 | 8.306807e-50 | -8.615850e-47 |
| Msa0806920 | Msa1462860 | 0.839121 | 1.915190e-57 | -8.615850e-47 |
| Msa0806920 | Msa1465080 | 0.856929 | 2.306311e-62 | -8.615850e-47 |
| Msa0806920 | Msa1465960 | 0.823376 | 1.432452e-53 | -8.615850e-47 |
| Msa0121590 | Msa0806920 | 0.856400 | 3.301185e-62 | -8.615850e-47 |
| Msa0121820 | Msa0806920 | 0.873306 | 1.628357e-67 | -8.615850e-47 |
| Msa0127310 | Msa0806920 | 0.850466 | 1.667053e-60 | -8.615850e-47 |
| Msa0128860 | Msa0806920 | 0.813594 | 2.365522e-51 | -8.615850e-47 |
| Msa0131450 | Msa0806920 | 0.840269 | 9.623956e-58 | -8.615850e-47 |
| Msa0136390 | Msa0806920 | 0.803418 | 3.519974e-49 | -8.615850e-47 |
| Msa0137040 | Msa0806920 | 0.802312 | 5.954165e-49 | -8.615850e-47 |
| Msa0146070 | Msa0806920 | -0.803768 | 2.977927e-49 | -8.615850e-47 |
| Msa0148120 | Msa0806920 | 0.817370 | 3.415594e-52 | -8.615850e-47 |
| Msa0155430 | Msa0806920 | 0.825238 | 5.227829e-54 | -8.615850e-47 |
| Msa0165950 | Msa0806920 | 0.857248 | 1.857868e-62 | -8.615850e-47 |
| Msa0166750 | Msa0806920 | 0.873457 | 1.448518e-67 | -8.615850e-47 |
| Msa0167480 | Msa0806920 | 0.820417 | 6.937180e-53 | -8.615850e-47 |
| Msa0169300 | Msa0806920 | 0.843511 | 1.339495e-58 | -8.615850e-47 |
| Msa0173740 | Msa0806920 | 0.810927 | 9.036418e-51 | -8.615850e-47 |
| Msa0173820 | Msa0806920 | 0.806213 | 9.172910e-50 | -8.615850e-47 |
| Msa0174730 | Msa0806920 | 0.811197 | 7.895666e-51 | -8.615850e-47 |
| Msa0174770 | Msa0806920 | 0.836587 | 8.576316e-57 | -8.615850e-47 |
| Msa0178990 | Msa0806920 | 0.806114 | 9.625101e-50 | -8.615850e-47 |
| Msa0180020 | Msa0806920 | 0.813804 | 2.126709e-51 | -8.615850e-47 |
| Msa0180120 | Msa0806920 | 0.823522 | 1.323579e-53 | -8.615850e-47 |
| Msa0183460 | Msa0806920 | 0.885292 | 9.217093e-72 | -8.615850e-47 |
| Msa0186310 | Msa0806920 | 0.805040 | 1.617409e-49 | -8.615850e-47 |
| Msa0186770 | Msa0806920 | 0.811534 | 6.673983e-51 | -8.615850e-47 |
| Msa0186890 | Msa0806920 | 0.802722 | 4.901849e-49 | -8.615850e-47 |
| Msa0187690 | Msa0806920 | 0.801525 | 8.642706e-49 | -8.615850e-47 |
| Msa0187930 | Msa0806920 | 0.825520 | 4.481556e-54 | -8.615850e-47 |
| Msa0191050 | Msa0806920 | 0.809665 | 1.691607e-50 | -8.615850e-47 |
| Msa0194480 | Msa0806920 | 0.833723 | 4.527823e-56 | -8.615850e-47 |
| Msa0194540 | Msa0806920 | 0.829369 | 5.348987e-55 | -8.615850e-47 |
| Msa0199690 | Msa0806920 | 0.874209 | 8.076279e-68 | -8.615850e-47 |
| Msa0200010 | Msa0806920 | 0.803552 | 3.300683e-49 | -8.615850e-47 |
| Msa0208810 | Msa0806920 | 0.816583 | 5.132218e-52 | -8.615850e-47 |
| Msa0211840 | Msa0806920 | 0.802785 | 4.756778e-49 | -8.615850e-47 |
| Msa0214710 | Msa0806920 | 0.839036 | 2.014079e-57 | -8.615850e-47 |
| Msa0227400 | Msa0806920 | 0.815259 | 1.013313e-51 | -8.615850e-47 |
| Msa0231100 | Msa0806920 | 0.801277 | 9.716007e-49 | -8.615850e-47 |
| Msa0231660 | Msa0806920 | 0.802434 | 5.621130e-49 | -8.615850e-47 |
| Msa0231880 | Msa0806920 | 0.828069 | 1.103369e-54 | -8.615850e-47 |
| Msa0233350 | Msa0806920 | 0.813506 | 2.473071e-51 | -8.615850e-47 |
| Msa0236270 | Msa0806920 | 0.870582 | 1.308755e-66 | -8.615850e-47 |
| Msa0366890 | Msa0806920 | 0.808008 | 3.823835e-50 | -8.615850e-47 |
| Msa0369050 | Msa0806920 | 0.824316 | 8.623578e-54 | -8.615850e-47 |
| Msa0369220 | Msa0806920 | 0.805029 | 1.626262e-49 | -8.615850e-47 |
| Msa0370160 | Msa0806920 | -0.801795 | 7.605341e-49 | -8.615850e-47 |
| Msa0376040 | Msa0806920 | 0.817031 | 4.071131e-52 | -8.615850e-47 |
| Msa0376690 | Msa0806920 | 0.866437 | 2.853064e-65 | -8.615850e-47 |
| Msa0376820 | Msa0806920 | 0.804415 | 2.183979e-49 | -8.615850e-47 |
| Msa0378490 | Msa0806920 | 0.804732 | 1.875378e-49 | -8.615850e-47 |
| Msa0380040 | Msa0806920 | 0.823190 | 1.582858e-53 | -8.615850e-47 |
| Msa0381700 | Msa0806920 | 0.804468 | 2.129229e-49 | -8.615850e-47 |
| Msa0384880 | Msa0806920 | 0.835064 | 2.085452e-56 | -8.615850e-47 |
| Msa0386040 | Msa0806920 | 0.806346 | 8.601936e-50 | -8.615850e-47 |
| Msa0392940 | Msa0806920 | 0.820116 | 8.131480e-53 | -8.615850e-47 |
| Msa0394400 | Msa0806920 | 0.836603 | 8.492907e-57 | -8.615850e-47 |
| Msa0402330 | Msa0806920 | 0.828370 | 9.336130e-55 | -8.615850e-47 |
| Msa0408240 | Msa0806920 | -0.800100 | 1.688354e-48 | -8.615850e-47 |
| Msa0414800 | Msa0806920 | 0.844417 | 7.660044e-59 | -8.615850e-47 |
| Msa0416400 | Msa0806920 | 0.857577 | 1.484865e-62 | -8.615850e-47 |
| Msa0419520 | Msa0806920 | 0.873367 | 1.553915e-67 | -8.615850e-47 |
| Msa0429290 | Msa0806920 | 0.830544 | 2.766750e-55 | -8.615850e-47 |
| Msa0437690 | Msa0806920 | -0.817720 | 2.848509e-52 | -8.615850e-47 |
| Msa0443390 | Msa0806920 | 0.833626 | 4.787577e-56 | -8.615850e-47 |
| Msa0458060 | Msa0806920 | 0.867557 | 1.253780e-65 | -8.615850e-47 |
| Msa0463500 | Msa0806920 | 0.814968 | 1.175459e-51 | -8.615850e-47 |
| Msa0465550 | Msa0806920 | 0.866202 | 3.388545e-65 | -8.615850e-47 |
| Msa0471590 | Msa0806920 | 0.858170 | 9.899705e-63 | -8.615850e-47 |
| Msa0472130 | Msa0806920 | 0.808195 | 3.489854e-50 | -8.615850e-47 |
| Msa0475580 | Msa0806920 | 0.825616 | 4.254689e-54 | -8.615850e-47 |
| Msa0479330 | Msa0806920 | 0.809660 | 1.695829e-50 | -8.615850e-47 |
| Msa0481480 | Msa0806920 | 0.855877 | 4.698353e-62 | -8.615850e-47 |
| Msa0481810 | Msa0806920 | 0.805629 | 1.217083e-49 | -8.615850e-47 |
| Msa0242230 | Msa0806920 | 0.800563 | 1.359036e-48 | -8.615850e-47 |
| Msa0242410 | Msa0806920 | 0.815574 | 8.623457e-52 | -8.615850e-47 |
| Msa0242680 | Msa0806920 | 0.802937 | 4.426857e-49 | -8.615850e-47 |
| Msa0244780 | Msa0806920 | 0.826171 | 3.140181e-54 | -8.615850e-47 |
| Msa0260210 | Msa0806920 | 0.848948 | 4.425221e-60 | -8.615850e-47 |
| Msa0260240 | Msa0806920 | 0.831501 | 1.610660e-55 | -8.615850e-47 |
| Msa0260280 | Msa0806920 | 0.831953 | 1.245944e-55 | -8.615850e-47 |
| Msa0262310 | Msa0806920 | 0.819070 | 1.408901e-52 | -8.615850e-47 |
| Msa0264570 | Msa0806920 | 0.810817 | 9.545222e-51 | -8.615850e-47 |
| Msa0267970 | Msa0806920 | 0.827468 | 1.538524e-54 | -8.615850e-47 |
| Msa0268130 | Msa0806920 | 0.820824 | 5.593567e-53 | -8.615850e-47 |
| Msa0280430 | Msa0806920 | 0.869460 | 3.046109e-66 | -8.615850e-47 |
| Msa0288730 | Msa0806920 | 0.805453 | 1.325283e-49 | -8.615850e-47 |
| Msa0291520 | Msa0806920 | 0.852918 | 3.367170e-61 | -8.615850e-47 |
| Msa0298990 | Msa0806920 | 0.814762 | 1.305860e-51 | -8.615850e-47 |
| Msa0304260 | Msa0806920 | 0.819307 | 1.244068e-52 | -8.615850e-47 |
| Msa0304290 | Msa0806920 | 0.858149 | 1.004595e-62 | -8.615850e-47 |
| Msa0304330 | Msa0806920 | 0.862795 | 3.935087e-64 | -8.615850e-47 |
| Msa0304590 | Msa0806920 | 0.889621 | 2.055497e-73 | -8.615850e-47 |
| Msa0304660 | Msa0806920 | 0.892325 | 1.761094e-74 | -8.615850e-47 |
| Msa0305890 | Msa0806920 | 0.840972 | 6.299855e-58 | -8.615850e-47 |
| Msa0310410 | Msa0806920 | 0.809381 | 1.946031e-50 | -8.615850e-47 |
| Msa0314720 | Msa0806920 | 0.803351 | 3.633864e-49 | -8.615850e-47 |
| Msa0331700 | Msa0806920 | 0.892025 | 2.319919e-74 | -8.615850e-47 |
| Msa0337650 | Msa0806920 | 0.840252 | 9.724972e-58 | -8.615850e-47 |
| Msa0340810 | Msa0806920 | 0.838715 | 2.438759e-57 | -8.615850e-47 |
| Msa0347680 | Msa0806920 | 0.835829 | 1.335910e-56 | -8.615850e-47 |
| Msa0348830 | Msa0806920 | 0.817472 | 3.240044e-52 | -8.615850e-47 |
| Msa0355270 | Msa0806920 | 0.830403 | 2.995519e-55 | -8.615850e-47 |
| Msa0485850 | Msa0806920 | 0.813814 | 2.115048e-51 | -8.615850e-47 |
| Msa0493920 | Msa0806920 | 0.809774 | 1.602488e-50 | -8.615850e-47 |
| Msa0508590 | Msa0806920 | 0.869047 | 4.149067e-66 | -8.615850e-47 |
| Msa0508630 | Msa0806920 | 0.867231 | 1.594377e-65 | -8.615850e-47 |
| Msa0508870 | Msa0806920 | 0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0509950 | Msa0806920 | -0.814357 | 1.605224e-51 | -8.615850e-47 |
| Msa0511490 | Msa0806920 | 0.805802 | 1.119643e-49 | -8.615850e-47 |
| Msa0516040 | Msa0806920 | 0.816110 | 6.545851e-52 | -8.615850e-47 |
| Msa0519220 | Msa0806920 | 0.822468 | 2.330827e-53 | -8.615850e-47 |
| Msa0523680 | Msa0806920 | 0.823995 | 1.025770e-53 | -8.615850e-47 |
| Msa0526540 | Msa0806920 | 0.838457 | 2.843400e-57 | -8.615850e-47 |
| Msa0534900 | Msa0806920 | 0.833247 | 5.949223e-56 | -8.615850e-47 |
| Msa0541860 | Msa0806920 | 0.803435 | 3.491552e-49 | -8.615850e-47 |
| Msa0542160 | Msa0806920 | 0.812754 | 3.615645e-51 | -8.615850e-47 |
| Msa0550570 | Msa0806920 | 0.810647 | 1.038733e-50 | -8.615850e-47 |
| Msa0552810 | Msa0806920 | 0.819805 | 9.574743e-53 | -8.615850e-47 |
| Msa0556790 | Msa0806920 | 0.821978 | 3.028133e-53 | -8.615850e-47 |
| Msa0576940 | Msa0806920 | 0.838369 | 2.996236e-57 | -8.615850e-47 |
| Msa0577990 | Msa0806920 | -0.802035 | 6.791388e-49 | -8.615850e-47 |
| Msa0580950 | Msa0806920 | 0.829485 | 5.014980e-55 | -8.615850e-47 |
| Msa0581070 | Msa0806920 | 0.828788 | 7.400056e-55 | -8.615850e-47 |
| Msa0591770 | Msa0806920 | 0.803822 | 2.901535e-49 | -8.615850e-47 |
| Msa0594910 | Msa0806920 | 0.803890 | 2.808326e-49 | -8.615850e-47 |
| Msa0600600 | Msa0806920 | 0.806477 | 8.073170e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806920 | MtrunA17_Chr5g0393991 | 87.288 | 236 | 0 | 1 | 1 | 236 | 1 | 206 | 4.27e-147 | 408 |
| Msa0806920 | MtrunA17_Chr5g0401581 | 70.213 | 235 | 40 | 1 | 2 | 236 | 127 | 331 | 1.54e-115 | 333 |
| Msa0806920 | MtrunA17_Chr5g0401581 | 74.803 | 127 | 31 | 1 | 1 | 127 | 1 | 126 | 1.22e-61 | 196 |
| Msa0806920 | MtrunA17_Chr5g0401571 | 70.690 | 232 | 35 | 2 | 1 | 232 | 1 | 199 | 2.16e-112 | 320 |
| Msa0806920 | MtrunA17_Chr6g0486061 | 53.165 | 237 | 79 | 2 | 1 | 235 | 1 | 207 | 4.64e-81 | 241 |
| Msa0806920 | MtrunA17_Chr6g0466791 | 54.661 | 236 | 76 | 2 | 1 | 236 | 1 | 205 | 2.97e-80 | 239 |
| Msa0806920 | MtrunA17_Chr6g0486071 | 53.361 | 238 | 77 | 3 | 1 | 235 | 1 | 207 | 9.07e-78 | 233 |
| Msa0806920 | MtrunA17_Chr7g0255501 | 45.570 | 237 | 73 | 5 | 1 | 235 | 1 | 183 | 7.58e-58 | 181 |
| Msa0806920 | MtrunA17_Chr7g0256491 | 34.783 | 230 | 117 | 3 | 7 | 235 | 50 | 247 | 5.42e-36 | 127 |
| Msa0806920 | MtrunA17_Chr3g0083801 | 31.602 | 231 | 125 | 3 | 7 | 236 | 26 | 224 | 1.42e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806920 | AT3G22320.1 | 66.809 | 235 | 48 | 1 | 2 | 236 | 1 | 205 | 1.20e-111 | 319 |
| Msa0806920 | AT5G57980.1 | 41.102 | 236 | 105 | 3 | 5 | 236 | 5 | 210 | 1.03e-54 | 174 |
| Msa0806920 | AT2G41340.1 | 34.764 | 233 | 119 | 4 | 4 | 235 | 17 | 217 | 1.38e-35 | 126 |
| Msa0806920 | AT3G57080.1 | 33.761 | 234 | 122 | 4 | 3 | 235 | 20 | 221 | 9.98e-35 | 124 |
| Msa0806920 | AT3G54490.1 | 30.736 | 231 | 127 | 3 | 7 | 236 | 35 | 233 | 3.36e-27 | 104 |
| Msa0806920 | AT2G41340.2 | 37.195 | 164 | 100 | 3 | 4 | 166 | 17 | 178 | 8.24e-26 | 100 |
| Msa0806920 | AT2G41340.3 | 37.423 | 163 | 99 | 3 | 4 | 165 | 17 | 177 | 1.29e-25 | 99.4 |
| Msa0806920 | AT3G16680.1 | 50.000 | 78 | 37 | 1 | 83 | 158 | 1 | 78 | 2.35e-18 | 77.4 |
Find 69 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAATTACTTCAATTTCT+AGG | 0.157965 | 5_3:-27655305 | Msa0806910:intron |
| ACATACCGATTTGTTGTATA+AGG | 0.225416 | 5_3:+27657588 | Msa0806920:CDS |
| GATCCTGTTGCAAGATATTA+TGG | 0.297526 | 5_3:+27657504 | Msa0806920:CDS |
| CAGAAGGTAAATTGGATTCT+TGG | 0.320134 | 5_3:-27653666 | Msa0806910:intron |
| TGAAAACACCATCGTCTTCT+TGG | 0.327054 | 5_3:-27653700 | Msa0806910:intron |
| GGAACGATGCCTTGGTAATC+TGG | 0.329965 | 5_3:+27657734 | Msa0806920:three_prime_UTR |
| AATTTCAGAAACACAAGTTT+TGG | 0.351766 | 5_3:-27654039 | Msa0806910:intron |
| TAACAACTTGTCCACGCTTC+AGG | 0.355396 | 5_3:-27657527 | Msa0806910:intron |
| TTTGTCTTTGAAATCGTGTT+TGG | 0.360361 | 5_3:-27653820 | Msa0806910:intron |
| AATTGCTTCCAAATTTCATT+TGG | 0.361732 | 5_3:+27654058 | Msa0806920:CDS |
| GGATCCGTTACCTGGATTCT+AGG | 0.372756 | 5_3:-27657486 | Msa0806910:intron |
| GAAATTGTGTTAATGTGTAC+TGG | 0.391284 | 5_3:+27657799 | Msa0806920:three_prime_UTR |
| ACACCGACTTTGGCTTCTTC+AGG | 0.396133 | 5_3:-27653927 | Msa0806910:intron |
| AGTACTGCGCTTAGAATTTG+TGG | 0.398119 | 5_3:+27655240 | Msa0806920:CDS |
| TTGCAACAGGATCCGTTACC+TGG | 0.403456 | 5_3:-27657494 | Msa0806910:intron |
| AACGAATTAAAGAATGTTCC+AGG | 0.404148 | 5_3:-27657931 | Msa0806910:intron |
| GTGTTAGCCCTCCTATTCCT+AGG | 0.411642 | 5_3:+27657712 | Msa0806920:three_prime_UTR |
| AAGAGGAAATCAGATGATAT+AGG | 0.416327 | 5_3:+27655279 | Msa0806920:CDS |
| TCCAAGCTTATCATAAATAT+CGG | 0.423094 | 5_3:-27657624 | Msa0806910:intron |
| TGTGCAGGAGGCGGAGTTGC+TGG | 0.426628 | 5_3:+27654295 | Msa0806920:intron |
| GACAGTGTATCTCTCAAGTA+AGG | 0.434087 | 5_3:-27654381 | Msa0806910:intron |
| TTTAGATTAACAAGTTGAGC+AGG | 0.438186 | 5_3:-27657879 | Msa0806910:intron |
| AGGCCATAATATCTTGCAAC+AGG | 0.438401 | 5_3:-27657507 | Msa0806910:intron |
| AGGCATCGTTCCCTAGGAAT+AGG | 0.440176 | 5_3:-27657723 | Msa0806910:intron |
| GTTTAGTTCTTTATGTTACA+TGG | 0.445517 | 5_3:+27657951 | Msa0806920:three_prime_UTR |
| CAATGAAGACTTACACCAAC+AGG | 0.446390 | 5_3:+27653955 | Msa0806920:CDS |
| TGGTGTCGCAGAAGGTAAAT+TGG | 0.446670 | 5_3:-27653674 | Msa0806910:intron |
| TCGTTGAGAATCTGATGTTC+CGG | 0.447338 | 5_3:-27654344 | Msa0806910:intron |
| GACAAGTTGTTAAGATAATC+CGG | 0.451366 | 5_3:+27657538 | Msa0806920:CDS |
| AATCACCGACGAGGTAGTTT+CGG | 0.453235 | 5_3:-27653782 | Msa0806910:intron |
| ACCGATATTTATGATAAGCT+TGG | 0.459580 | 5_3:+27657623 | Msa0806920:three_prime_UTR |
| TTCCACTGTAACTAAACTCC+TGG | 0.484475 | 5_3:+27657913 | Msa0806920:three_prime_UTR |
| TTCCTGCAGTCTCACTTGGC+CGG | 0.488931 | 5_3:-27657557 | Msa0806910:intron |
| GAAATCCTTATACAACAAAT+CGG | 0.490397 | 5_3:-27657593 | Msa0806910:intron |
| ATTCCTAGGGAACGATGCCT+TGG | 0.517424 | 5_3:+27657726 | Msa0806920:three_prime_UTR |
| TTTGGCAAAGGGAGTAAGAC+TGG | 0.523494 | 5_3:-27654021 | Msa0806910:intron |
| TATCTTCCTGCAGTCTCACT+TGG | 0.525204 | 5_3:-27657561 | Msa0806910:intron |
| CTTGGTGGTGGTGTCGCAGA+AGG | 0.526289 | 5_3:-27653682 | Msa0806910:intron |
| CACGATTTCAAAGACAAATA+CGG | 0.530990 | 5_3:+27653825 | Msa0806920:CDS |
| CACCATCGTCTTCTTGGTGG+TGG | 0.542380 | 5_3:-27653694 | Msa0806910:intron |
| TTCCAGGAGTTTAGTTACAG+TGG | 0.549556 | 5_3:-27657915 | Msa0806910:intron |
| TTACCAAGGCATCGTTCCCT+AGG | 0.549736 | 5_3:-27657729 | Msa0806910:intron |
| ATTCTCAGAATTCATCCTGT+TGG | 0.552863 | 5_3:-27653970 | Msa0806910:intron |
| ATCATAAATATCGGTAGGCA+AGG | 0.554747 | 5_3:-27657615 | Msa0806910:intron |
| TTCTCAGCTACCTAGAATCC+AGG | 0.556727 | 5_3:+27657476 | Msa0806920:intron |
| TGTTAGCCCTCCTATTCCTA+GGG | 0.557518 | 5_3:+27657713 | Msa0806920:three_prime_UTR |
| AAGGTAAATTGGATTCTTGG+TGG | 0.561055 | 5_3:-27653663 | Msa0806910:intron |
| AAACACCATCGTCTTCTTGG+TGG | 0.561171 | 5_3:-27653697 | Msa0806910:intron |
| AAAAGAGCATGTGCTTGTGC+CGG | 0.568897 | 5_3:+27654325 | Msa0806920:CDS |
| CATCGTTCCCTAGGAATAGG+AGG | 0.569196 | 5_3:-27657720 | Msa0806910:intron |
| GAGGCAGCGAAAGATTTAAG+AGG | 0.572435 | 5_3:+27655262 | Msa0806920:CDS |
| AGATATTATGGCCTGAAGCG+TGG | 0.578373 | 5_3:+27657516 | Msa0806920:CDS |
| AAATTGTGTTAATGTGTACT+GGG | 0.583749 | 5_3:+27657800 | Msa0806920:three_prime_UTR |
| ATCCGGCCAAGTGAGACTGC+AGG | 0.593487 | 5_3:+27657555 | Msa0806920:CDS |
| GTAAATTGGATTCTTGGTGG+TGG | 0.593522 | 5_3:-27653660 | Msa0806910:intron |
| AAGACATAGATCTGATCAGA+AGG | 0.597739 | 5_3:-27653900 | Msa0806910:intron |
| ATACACTGTCAAGGAAACTC+AGG | 0.607183 | 5_3:+27654394 | Msa0806920:CDS |
| TTTCCTGAAGAAGCCAAAGT+CGG | 0.608753 | 5_3:+27653924 | Msa0806920:CDS |
| TTAGATTAACAAGTTGAGCA+GGG | 0.610700 | 5_3:-27657878 | Msa0806910:intron |
| AATTTCAAACATATTTCATG+CGG | 0.614172 | 5_3:-27657782 | Msa0806910:intron |
| AGCTTATCATAAATATCGGT+AGG | 0.630706 | 5_3:-27657620 | Msa0806910:intron |
| ATCGTTCCCTAGGAATAGGA+GGG | 0.648651 | 5_3:-27657719 | Msa0806910:intron |
| ACTTGAGAGATACACTGTCA+AGG | 0.648812 | 5_3:+27654385 | Msa0806920:CDS |
| GCTACCTAGAATCCAGGTAA+CGG | 0.648864 | 5_3:+27657482 | Msa0806920:intron |
| AAAGACCGAAACTACCTCGT+CGG | 0.681273 | 5_3:+27653777 | Msa0806920:CDS |
| ACTGCGCTTAGAATTTGTGG+AGG | 0.692685 | 5_3:+27655243 | Msa0806920:CDS |
| TCTCGAACTCCAGATTACCA+AGG | 0.722418 | 5_3:-27657743 | Msa0806910:intron |
| CACCACCACCAAGAAGACGA+TGG | 0.724422 | 5_3:+27653692 | Msa0806920:exon |
| TGAGTTCGAAATCACCGACG+AGG | 0.765537 | 5_3:-27653791 | Msa0806910:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATTATATCTAATATTTA+TGG | + | chr5_3:27657448-27657467 | Msa0806920:intron | 10.0% |
| !! | TCATTATATCTAATATTTAT+GGG | + | chr5_3:27657449-27657468 | Msa0806920:intron | 10.0% |
| !! | AATGATTACATAAATGAAAT+AGG | + | chr5_3:27656317-27656336 | Msa0806920:intron | 15.0% |
| !!! | GATTTTCAAAGTAATATTAT+AGG | + | chr5_3:27656618-27656637 | Msa0806920:intron | 15.0% |
| !! | AAAAAAAAACATAGAAACAT+GGG | - | chr5_3:27656858-27656877 | Msa0806910:intron | 15.0% |
| !! | AAAAACTTCCAAATGAAATT+TGG | - | chr5_3:27654069-27654088 | Msa0806910:intron | 20.0% |
| !!! | TCATTTTCTCAAATTATCAT+CGG | - | chr5_3:27654186-27654205 | Msa0806910:intron | 20.0% |
| !!! | TGTTTTTTGTGTTTTTAGTA+TGG | + | chr5_3:27654437-27654456 | Msa0806920:intron | 20.0% |
| !!! | GTTTTTTGTGTTTTTAGTAT+GGG | + | chr5_3:27654438-27654457 | Msa0806920:intron | 20.0% |
| !! | ATAAGTTGTTTATCAAAATC+GGG | - | chr5_3:27654471-27654490 | Msa0806910:intron | 20.0% |
| !! | GATAAGTTGTTTATCAAAAT+CGG | - | chr5_3:27654472-27654491 | Msa0806910:intron | 20.0% |
| !!! | TATTAACCGACATAATTTTT+GGG | - | chr5_3:27654686-27654705 | Msa0806910:intron | 20.0% |
| !!! | TTATTAACCGACATAATTTT+TGG | - | chr5_3:27654687-27654706 | Msa0806910:intron | 20.0% |
| !! | ACATTCAATCAATTCAATAA+GGG | - | chr5_3:27654735-27654754 | Msa0806910:intron | 20.0% |
| !! | TTAAGAATTAAGATGATCAA+AGG | - | chr5_3:27655089-27655108 | Msa0806910:intron | 20.0% |
| !! | AATTCTTAAATAGTCTCATT+TGG | + | chr5_3:27655100-27655119 | Msa0806920:intron | 20.0% |
| !!! | TGAATCTTTTAACTTAGATT+TGG | + | chr5_3:27655197-27655216 | Msa0806920:intron | 20.0% |
| !!! | ATAAATCACTTACATTTTCT+TGG | - | chr5_3:27655385-27655404 | Msa0806910:intron | 20.0% |
| !! | AAAATGTAAGTGATTTATCT+AGG | + | chr5_3:27655387-27655406 | Msa0806920:intron | 20.0% |
| !!! | TTTTTGCTCATGATTTTTTT+AGG | - | chr5_3:27656597-27656616 | Msa0806910:intron | 20.0% |
| !! | TGAGAAAAATTTGATAAAGA+CGG | - | chr5_3:27656725-27656744 | Msa0806910:intron | 20.0% |
| !! | GAAAAAAAAACATAGAAACA+TGG | - | chr5_3:27656859-27656878 | Msa0806910:intron | 20.0% |
| !!! | TTTGAAATATTAATAGAGTC+AGG | + | chr5_3:27656929-27656948 | Msa0806920:intron | 20.0% |
| !! | TTGAAATATTAATAGAGTCA+GGG | + | chr5_3:27656930-27656949 | Msa0806920:intron | 20.0% |
| !! | GATATTATAGTATTTCAGTT+AGG | + | chr5_3:27657004-27657023 | Msa0806920:intron | 20.0% |
| !!! | GATTTTGAATCTTTTTAGAT+TGG | + | chr5_3:27657268-27657287 | Msa0806920:intron | 20.0% |
| !! | TATTGTCAACATTACAAAAA+AGG | - | chr5_3:27657664-27657683 | Msa0806910:intron | 20.0% |
| !! | AATTTCAAACATATTTCATG+CGG | - | chr5_3:27657785-27657804 | Msa0806910:intron | 20.0% |
| !!! | ATCAGAAGGTTTATCTTTTT+TGG | - | chr5_3:27653889-27653908 | Msa0806910:intron | 25.0% |
| !! | AATTTCAGAAACACAAGTTT+TGG | - | chr5_3:27654042-27654061 | Msa0806910:intron | 25.0% |
| ! | AATTGCTTCCAAATTTCATT+TGG | + | chr5_3:27654058-27654077 | Msa0806920:CDS | 25.0% |
| !! | ATTTCATTTGGAAGTTTTTC+AGG | + | chr5_3:27654070-27654089 | Msa0806920:CDS | 25.0% |
| !!! | TAAACCCTAATTTGTTTATG+CGG | + | chr5_3:27654113-27654132 | Msa0806920:intron | 25.0% |
| ! | TAAACCGCATAAACAAATTA+GGG | - | chr5_3:27654120-27654139 | Msa0806910:intron | 25.0% |
| ! | ATAAACCGCATAAACAAATT+AGG | - | chr5_3:27654121-27654140 | Msa0806910:intron | 25.0% |
| ! | GTTATTTATACCTGACATAT+TGG | + | chr5_3:27654154-27654173 | Msa0806920:intron | 25.0% |
| ! | CACATTCAATCAATTCAATA+AGG | - | chr5_3:27654736-27654755 | Msa0806910:intron | 25.0% |
| ! | AAGTGAAAATGTAAGCTATT+AGG | + | chr5_3:27654788-27654807 | Msa0806920:intron | 25.0% |
| ! | AGTGAAAATGTAAGCTATTA+GGG | + | chr5_3:27654789-27654808 | Msa0806920:intron | 25.0% |
| ! | ACAAAATGCTATCATCAAAA+AGG | - | chr5_3:27654878-27654897 | Msa0806910:intron | 25.0% |
| !!! | TTTTACTGCTTTTGTTGATT+TGG | + | chr5_3:27654918-27654937 | Msa0806920:intron | 25.0% |
| ! | AAGATAATTAAGATGATCAG+CGG | - | chr5_3:27655039-27655058 | Msa0806910:intron | 25.0% |
| ! | CCAAAATTACTTCAATTTCT+AGG | - | chr5_3:27655308-27655327 | Msa0806910:intron | 25.0% |
| !! | CCTAGAAATTGAAGTAATTT+TGG | + | chr5_3:27655305-27655324 | Msa0806920:intron | 25.0% |
| ! | GTATTACTATTTACTGAAAG+TGG | + | chr5_3:27655327-27655346 | Msa0806920:intron | 25.0% |
| ! | TTACTATAACACATCTGTAT+TGG | - | chr5_3:27656144-27656163 | Msa0806910:intron | 25.0% |
| ! | TTCAACAATTACAGTGAAAA+TGG | + | chr5_3:27656554-27656573 | Msa0806920:intron | 25.0% |
| ! | TTGAAATATTAACAGAGTCA+GGG | - | chr5_3:27656694-27656713 | Msa0806910:intron | 25.0% |
| !! | TTTGAAATATTAACAGAGTC+AGG | - | chr5_3:27656695-27656714 | Msa0806910:intron | 25.0% |
| ! | TGAGAAACTTTAGATAAAGA+CGG | + | chr5_3:27656899-27656918 | Msa0806920:intron | 25.0% |
| ! | TCTATTTGCGTTAAATACAA+TGG | - | chr5_3:27657179-27657198 | Msa0806910:intron | 25.0% |
| !! | CATTGTTTATTTCTTAGTGT+TGG | + | chr5_3:27657206-27657225 | Msa0806920:intron | 25.0% |
| !! | TTTTGTCATAAAATTGTCGT+TGG | + | chr5_3:27657245-27657264 | Msa0806920:intron | 25.0% |
| ! | TTTGTCATAAAATTGTCGTT+GGG | + | chr5_3:27657246-27657265 | Msa0806920:intron | 25.0% |
| ! | GAAATCCTTATACAACAAAT+CGG | - | chr5_3:27657596-27657615 | Msa0806910:intron | 25.0% |
| ! | TCCAAGCTTATCATAAATAT+CGG | - | chr5_3:27657627-27657646 | Msa0806910:intron | 25.0% |
| !! | GTTGACAATAAGTACATTTT+AGG | + | chr5_3:27657674-27657693 | Msa0806920:three_prime_UTR | 25.0% |
| !!! | ACAATAAGTACATTTTAGGA+GGG | + | chr5_3:27657678-27657697 | Msa0806920:three_prime_UTR | 25.0% |
| ! | AAATTGTGTTAATGTGTACT+GGG | + | chr5_3:27657800-27657819 | Msa0806920:three_prime_UTR | 25.0% |
| !!! | TCTGAGACTAATTTTTTTTC+TGG | + | chr5_3:27657825-27657844 | Msa0806920:three_prime_UTR | 25.0% |
| !!! | GTTTAGTTCTTTATGTTACA+TGG | + | chr5_3:27657951-27657970 | Msa0806920:three_prime_UTR | 25.0% |
| !! | TTTGTCTTTGAAATCGTGTT+TGG | - | chr5_3:27653823-27653842 | Msa0806910:intron | 30.0% |
| CACGATTTCAAAGACAAATA+CGG | + | chr5_3:27653825-27653844 | Msa0806920:CDS | 30.0% | |
| !!! | GTGTTTTTAGTATGGGATTA+AGG | + | chr5_3:27654445-27654464 | Msa0806920:intron | 30.0% |
| !!! | GAGCTATTTTTGTAAGTTCT+TGG | + | chr5_3:27654651-27654670 | Msa0806920:intron | 30.0% |
| TAGTCTCCCAAAAATTATGT+CGG | + | chr5_3:27654677-27654696 | Msa0806920:intron | 30.0% | |
| AATTGATTGAATGTGTGTGA+TGG | + | chr5_3:27654741-27654760 | Msa0806920:intron | 30.0% | |
| !!! | TATTAGGGTTTTGTTTGTTG+TGG | + | chr5_3:27654804-27654823 | Msa0806920:intron | 30.0% |
| CAACAAAAGCAGTAAAAGAA+AGG | - | chr5_3:27654915-27654934 | Msa0806910:intron | 30.0% | |
| TTAAATAGTCTCATTTGGCT+TGG | + | chr5_3:27655105-27655124 | Msa0806920:intron | 30.0% | |
| CAAATCTTCCTTGACTTAAT+TGG | - | chr5_3:27655163-27655182 | Msa0806910:intron | 30.0% | |
| AAGAGGAAATCAGATGATAT+AGG | + | chr5_3:27655279-27655298 | Msa0806920:CDS | 30.0% | |
| GCATTTGAAGATTAATTCTC+AGG | + | chr5_3:27655409-27655428 | Msa0806920:intron | 30.0% | |
| TTACTGTTACTCGTTGTATT+TGG | - | chr5_3:27655674-27655693 | Msa0806910:intron | 30.0% | |
| ACTAAGAAATGCTTCTAAAC+AGG | - | chr5_3:27655849-27655868 | Msa0806910:intron | 30.0% | |
| ! | GTGTTGCATATTCTTACTTT+TGG | - | chr5_3:27655907-27655926 | Msa0806910:intron | 30.0% |
| AACACATCTGTATTGGAAAA+GGG | - | chr5_3:27656023-27656042 | Msa0806910:intron | 30.0% | |
| TAACACATCTGTATTGGAAA+AGG | - | chr5_3:27656024-27656043 | Msa0806910:intron | 30.0% | |
| TCACTATAACACATCTGTAT+TGG | - | chr5_3:27656030-27656049 | Msa0806910:intron | 30.0% | |
| TGTGTTATAGTGAGTTAACT+TGG | + | chr5_3:27656037-27656056 | Msa0806920:intron | 30.0% | |
| AACACATCTGTATTGGAAAA+GGG | - | chr5_3:27656023-27656042 | Msa0806910:intron | 30.0% | |
| TAACACATCTGTATTGGAAA+AGG | - | chr5_3:27656024-27656043 | Msa0806910:intron | 30.0% | |
| ! | AATTACAGTGAAAATGGACT+TGG | + | chr5_3:27656560-27656579 | Msa0806920:intron | 30.0% |
| GAAAATCACTTACAAAGACA+GGG | - | chr5_3:27656663-27656682 | Msa0806910:intron | 30.0% | |
| TGAAAATCACTTACAAAGAC+AGG | - | chr5_3:27656664-27656683 | Msa0806910:intron | 30.0% | |
| !!! | TTTTTTTTTCCACATGACGA+GGG | + | chr5_3:27656869-27656888 | Msa0806920:intron | 30.0% |
| GAGAAACTTTAGATAAAGAC+GGG | + | chr5_3:27656900-27656919 | Msa0806920:intron | 30.0% | |
| AGAAACTTTAGATAAAGACG+GGG | + | chr5_3:27656901-27656920 | Msa0806920:intron | 30.0% | |
| TAACTAGGAAAGAAAGATGA+AGG | - | chr5_3:27657073-27657092 | Msa0806910:intron | 30.0% | |
| TACTTTATCATCGTGTAACT+AGG | - | chr5_3:27657088-27657107 | Msa0806910:intron | 30.0% | |
| ! | TAGAATCTAGTTTGTGATTC+TGG | + | chr5_3:27657106-27657125 | Msa0806920:intron | 30.0% |
| !! | GATTCTGGTTTAGATTTCAA+TGG | + | chr5_3:27657121-27657140 | Msa0806920:intron | 30.0% |
| CATTAGACAAAGAATGATCA+AGG | - | chr5_3:27657340-27657359 | Msa0806910:intron | 30.0% | |
| CTTGATCATTCTTTGTCTAA+TGG | + | chr5_3:27657338-27657357 | Msa0806920:intron | 30.0% | |
| GACAAGTTGTTAAGATAATC+CGG | + | chr5_3:27657538-27657557 | Msa0806920:CDS | 30.0% | |
| !! | ACATACCGATTTGTTGTATA+AGG | + | chr5_3:27657588-27657607 | Msa0806920:CDS | 30.0% |
| AGCTTATCATAAATATCGGT+AGG | - | chr5_3:27657623-27657642 | Msa0806910:intron | 30.0% | |
| ACCGATATTTATGATAAGCT+TGG | + | chr5_3:27657623-27657642 | Msa0806920:three_prime_UTR | 30.0% | |
| ! | GACAATAAGTACATTTTAGG+AGG | + | chr5_3:27657677-27657696 | Msa0806920:three_prime_UTR | 30.0% |
| !! | CAATAAGTACATTTTAGGAG+GGG | + | chr5_3:27657679-27657698 | Msa0806920:three_prime_UTR | 30.0% |
| GAAATTGTGTTAATGTGTAC+TGG | + | chr5_3:27657799-27657818 | Msa0806920:three_prime_UTR | 30.0% | |
| ! | TTAGATTAACAAGTTGAGCA+GGG | - | chr5_3:27657881-27657900 | Msa0806910:intron | 30.0% |
| ! | TTTAGATTAACAAGTTGAGC+AGG | - | chr5_3:27657882-27657901 | Msa0806910:intron | 30.0% |
| AACGAATTAAAGAATGTTCC+AGG | - | chr5_3:27657934-27657953 | Msa0806910:intron | 30.0% | |
| GTCCAAAAGTTGTGAAAAAG+TGG | + | chr5_3:27653575-27653594 | Msa0806920:five_prime_UTR | 35.0% | |
| !!! | AGCCACTTTTTCACAACTTT+TGG | - | chr5_3:27653580-27653599 | Msa0806910:intron | 35.0% |
| AAGGTAAATTGGATTCTTGG+TGG | - | chr5_3:27653666-27653685 | Msa0806910:intron | 35.0% | |
| CAGAAGGTAAATTGGATTCT+TGG | - | chr5_3:27653669-27653688 | Msa0806910:intron | 35.0% | |
| AAGACATAGATCTGATCAGA+AGG | - | chr5_3:27653903-27653922 | Msa0806910:intron | 35.0% | |
| ATTCTCAGAATTCATCCTGT+TGG | - | chr5_3:27653973-27653992 | Msa0806910:intron | 35.0% | |
| !! | GAAACACAAGTTTTGGCAAA+GGG | - | chr5_3:27654035-27654054 | Msa0806910:intron | 35.0% |
| !! | AGAAACACAAGTTTTGGCAA+AGG | - | chr5_3:27654036-27654055 | Msa0806910:intron | 35.0% |
| GCGGTTTATAAGAGTTAGTT+AGG | + | chr5_3:27654132-27654151 | Msa0806920:intron | 35.0% | |
| ! | CTCAAGTAAGGTTTTCTTCT+CGG | - | chr5_3:27654372-27654391 | Msa0806910:intron | 35.0% |
| CACAAGCTGTTATCATGATA+AGG | + | chr5_3:27654504-27654523 | Msa0806920:intron | 35.0% | |
| CAATTCAATAAGGGTCTGTT+TGG | - | chr5_3:27654726-27654745 | Msa0806910:intron | 35.0% | |
| ! | TGATGGATGTGTAATGTCAA+AGG | + | chr5_3:27654758-27654777 | Msa0806920:intron | 35.0% |
| GAAGAAGTAGTAGATGATGT+TGG | + | chr5_3:27654834-27654853 | Msa0806920:intron | 35.0% | |
| ! | CTTTGAAAGAATTAGCAGTG+GGG | - | chr5_3:27655062-27655081 | Msa0806910:intron | 35.0% |
| ! | CCTTTGAAAGAATTAGCAGT+GGG | - | chr5_3:27655063-27655082 | Msa0806910:intron | 35.0% |
| ! | ACCTTTGAAAGAATTAGCAG+TGG | - | chr5_3:27655064-27655083 | Msa0806910:intron | 35.0% |
| ACTATTTACTGAAAGTGGTG+AGG | + | chr5_3:27655332-27655351 | Msa0806920:intron | 35.0% | |
| CTATTTACTGAAAGTGGTGA+GGG | + | chr5_3:27655333-27655352 | Msa0806920:intron | 35.0% | |
| !! | CCTAGTGGCTTTAATTACAA+AGG | - | chr5_3:27655549-27655568 | Msa0806910:intron | 35.0% |
| CCTTTGTAATTAAAGCCACT+AGG | + | chr5_3:27655546-27655565 | Msa0806920:intron | 35.0% | |
| TTGTAATTAAAGCCACTAGG+TGG | + | chr5_3:27655549-27655568 | Msa0806920:intron | 35.0% | |
| ! | AAGGCGGTTTTTATCACATA+AGG | + | chr5_3:27655610-27655629 | Msa0806920:intron | 35.0% |
| ! | AGGCGGTTTTTATCACATAA+GGG | + | chr5_3:27655611-27655630 | Msa0806920:intron | 35.0% |
| TGTATTTGGTTAGAGGCAAA+TGG | - | chr5_3:27655660-27655679 | Msa0806910:intron | 35.0% | |
| TACTCGTTGTATTTGGTTAG+AGG | - | chr5_3:27655667-27655686 | Msa0806910:intron | 35.0% | |
| TGATATAGCACATCGCAAAA+GGG | - | chr5_3:27655723-27655742 | Msa0806910:intron | 35.0% | |
| TTGATATAGCACATCGCAAA+AGG | - | chr5_3:27655724-27655743 | Msa0806910:intron | 35.0% | |
| TCAACTGAAGAGATGCAATT+AGG | + | chr5_3:27655788-27655807 | Msa0806920:intron | 35.0% | |
| TAGACTGAGAGAAGAGAAAA+TGG | - | chr5_3:27655825-27655844 | Msa0806910:intron | 35.0% | |
| !! | TGGAAAAGGGTACTAATTGT+CGG | - | chr5_3:27656010-27656029 | Msa0806910:intron | 35.0% |
| !! | TGGAAAAGGGTACTAATTGT+CGG | - | chr5_3:27656010-27656029 | Msa0806910:intron | 35.0% |
| !! | ACATGTGTCTGAAAAGTATC+TGG | + | chr5_3:27656514-27656533 | Msa0806920:intron | 35.0% |
| ATAGGAGTAAACCACCAATT+TGG | + | chr5_3:27656636-27656655 | Msa0806920:intron | 35.0% | |
| !!! | GTTTTTTTTTCCACATGACG+AGG | + | chr5_3:27656868-27656887 | Msa0806920:intron | 35.0% |
| TGAGAATCACTTACAAAGAC+AGG | + | chr5_3:27656960-27656979 | Msa0806920:intron | 35.0% | |
| GAGAATCACTTACAAAGACA+GGG | + | chr5_3:27656961-27656980 | Msa0806920:intron | 35.0% | |
| TATCGAGTAAACCACCAATT+TGG | - | chr5_3:27656988-27657007 | Msa0806910:intron | 35.0% | |
| GATCCTGTTGCAAGATATTA+TGG | + | chr5_3:27657504-27657523 | Msa0806920:CDS | 35.0% | |
| ATCATAAATATCGGTAGGCA+AGG | - | chr5_3:27657618-27657637 | Msa0806910:intron | 35.0% | |
| GTAAATTGGATTCTTGGTGG+TGG | - | chr5_3:27653663-27653682 | Msa0806910:intron | 40.0% | |
| TGAAAACACCATCGTCTTCT+TGG | - | chr5_3:27653703-27653722 | Msa0806910:intron | 40.0% | |
| ! | GCATTTGCATCACTGTTTTG+CGG | - | chr5_3:27653755-27653774 | Msa0806910:intron | 40.0% |
| TTTCCTGAAGAAGCCAAAGT+CGG | + | chr5_3:27653924-27653943 | Msa0806920:CDS | 40.0% | |
| !!! | CATTGTTTTCACACCGACTT+TGG | - | chr5_3:27653940-27653959 | Msa0806910:intron | 40.0% |
| CAATGAAGACTTACACCAAC+AGG | + | chr5_3:27653955-27653974 | Msa0806920:CDS | 40.0% | |
| TGCTTCAGTATAACTGTTGC+TGG | + | chr5_3:27654258-27654277 | Msa0806920:intron | 40.0% | |
| TCGTTGAGAATCTGATGTTC+CGG | - | chr5_3:27654347-27654366 | Msa0806910:intron | 40.0% | |
| GACAGTGTATCTCTCAAGTA+AGG | - | chr5_3:27654384-27654403 | Msa0806910:intron | 40.0% | |
| ACTTGAGAGATACACTGTCA+AGG | + | chr5_3:27654385-27654404 | Msa0806920:CDS | 40.0% | |
| ATACACTGTCAAGGAAACTC+AGG | + | chr5_3:27654394-27654413 | Msa0806920:CDS | 40.0% | |
| GGATGTGTAATGTCAAAGGT+AGG | + | chr5_3:27654762-27654781 | Msa0806920:intron | 40.0% | |
| CCCACTGCTAATTCTTTCAA+AGG | + | chr5_3:27655060-27655079 | Msa0806920:intron | 40.0% | |
| CTTCCTTGCCAATTAAGTCA+AGG | + | chr5_3:27655152-27655171 | Msa0806920:intron | 40.0% | |
| CTTCCTTGACTTAATTGGCA+AGG | - | chr5_3:27655158-27655177 | Msa0806910:intron | 40.0% | |
| AGTACTGCGCTTAGAATTTG+TGG | + | chr5_3:27655240-27655259 | Msa0806920:CDS | 40.0% | |
| TTGGTTAGAGGCAAATGGTT+GGG | - | chr5_3:27655655-27655674 | Msa0806910:intron | 40.0% | |
| TTTGGTTAGAGGCAAATGGT+TGG | - | chr5_3:27655656-27655675 | Msa0806910:intron | 40.0% | |
| ATTGCATCTCTTCAGTTGAG+TGG | - | chr5_3:27655787-27655806 | Msa0806910:intron | 40.0% | |
| GAATACTATGAGTCTTCAGC+TGG | - | chr5_3:27655964-27655983 | Msa0806910:intron | 40.0% | |
| ! | TCATTGATAGTCCTGAGTAC+AGG | + | chr5_3:27656450-27656469 | Msa0806920:intron | 40.0% |
| ! | GGGTTTGTGTCTTGTCATTT+CGG | + | chr5_3:27656474-27656493 | Msa0806920:intron | 40.0% |
| GACACATGTTGTACGAATGA+CGG | - | chr5_3:27656503-27656522 | Msa0806910:intron | 40.0% | |
| TACAAAGACAGGGACCAAAT+TGG | - | chr5_3:27656971-27656990 | Msa0806910:intron | 40.0% | |
| TACAAAGACAGGGACCAAAT+TGG | + | chr5_3:27656971-27656990 | Msa0806920:intron | 40.0% | |
| TTCAATGGAATCAAGCTAGC+AGG | + | chr5_3:27657136-27657155 | Msa0806920:intron | 40.0% | |
| AGGCCATAATATCTTGCAAC+AGG | - | chr5_3:27657510-27657529 | Msa0806910:intron | 40.0% | |
| TTCCACTGTAACTAAACTCC+TGG | + | chr5_3:27657913-27657932 | Msa0806920:three_prime_UTR | 40.0% | |
| TTCCAGGAGTTTAGTTACAG+TGG | - | chr5_3:27657918-27657937 | Msa0806910:intron | 40.0% | |
| !! | TGGTGTCGCAGAAGGTAAAT+TGG | - | chr5_3:27653677-27653696 | Msa0806910:intron | 45.0% |
| AAACACCATCGTCTTCTTGG+TGG | - | chr5_3:27653700-27653719 | Msa0806910:intron | 45.0% | |
| ! | GAAGACGATGGTGTTTTCAG+AGG | + | chr5_3:27653704-27653723 | Msa0806920:exon | 45.0% |
| AAAGACCGAAACTACCTCGT+CGG | + | chr5_3:27653777-27653796 | Msa0806920:CDS | 45.0% | |
| AATCACCGACGAGGTAGTTT+CGG | - | chr5_3:27653785-27653804 | Msa0806910:intron | 45.0% | |
| TTTGGCAAAGGGAGTAAGAC+TGG | - | chr5_3:27654024-27654043 | Msa0806910:intron | 45.0% | |
| !! | TCGGTGTTGACCAATATGTC+AGG | - | chr5_3:27654167-27654186 | Msa0806910:intron | 45.0% |
| ! | AAAAGAGCATGTGCTTGTGC+CGG | + | chr5_3:27654325-27654344 | Msa0806920:CDS | 45.0% |
| ! | GGTCATCTCGTTCATCCTTT+TGG | + | chr5_3:27655007-27655026 | Msa0806920:intron | 45.0% |
| CAAGGAAGCTTGATGTTGCA+GGG | - | chr5_3:27655140-27655159 | Msa0806910:intron | 45.0% | |
| ACTGCGCTTAGAATTTGTGG+AGG | + | chr5_3:27655243-27655262 | Msa0806920:CDS | 45.0% | |
| GAGGCAGCGAAAGATTTAAG+AGG | + | chr5_3:27655262-27655281 | Msa0806920:CDS | 45.0% | |
| CCAGTGAGACTTGAAAGTGA+AGG | - | chr5_3:27655494-27655513 | Msa0806910:intron | 45.0% | |
| ! | CCTTCACTTTCAAGTCTCAC+TGG | + | chr5_3:27655491-27655510 | Msa0806920:intron | 45.0% |
| AATGGCATAGTTCCACCTAG+TGG | - | chr5_3:27655564-27655583 | Msa0806910:intron | 45.0% | |
| GCCATTAGCTGAACACCAAA+CGG | + | chr5_3:27655578-27655597 | Msa0806920:intron | 45.0% | |
| !! | TCCGTTTGGTGTTCAGCTAA+TGG | - | chr5_3:27655582-27655601 | Msa0806910:intron | 45.0% |
| TTAGCTGAACACCAAACGGA+AGG | + | chr5_3:27655582-27655601 | Msa0806920:intron | 45.0% | |
| CACCAAACGGAAGGTAAGAA+AGG | + | chr5_3:27655591-27655610 | Msa0806920:intron | 45.0% | |
| CAAACGGAAGGTAAGAAAGG+CGG | + | chr5_3:27655594-27655613 | Msa0806920:intron | 45.0% | |
| TTGGGATAAGTATGTGCTGC+TGG | - | chr5_3:27655637-27655656 | Msa0806910:intron | 45.0% | |
| TCTGTACATATGTTGCCGTC+TGG | + | chr5_3:27655755-27655774 | Msa0806920:intron | 45.0% | |
| CATCTCTTCAGTTGAGTGGA+CGG | - | chr5_3:27655783-27655802 | Msa0806910:intron | 45.0% | |
| !! | ACTGGCTTGTCTCAGCAAAA+TGG | - | chr5_3:27655937-27655956 | Msa0806910:intron | 45.0% |
| TTAACGCATCTACGCAGGTA+AGG | - | chr5_3:27655986-27656005 | Msa0806910:intron | 45.0% | |
| TTAACGCATCTAAGCAGGCA+AGG | - | chr5_3:27656100-27656119 | Msa0806910:intron | 45.0% | |
| TCGGATTAACGCATCTAAGC+AGG | - | chr5_3:27656105-27656124 | Msa0806910:intron | 45.0% | |
| ! | TTGATAGTCCTGAGTACAGG+CGG | + | chr5_3:27656453-27656472 | Msa0806920:intron | 45.0% |
| AAAGACAGGGACCAAATTGG+TGG | - | chr5_3:27656974-27656993 | Msa0806910:intron | 45.0% | |
| CAATTAAGTCCCTCGTCATG+TGG | - | chr5_3:27656881-27656900 | Msa0806910:intron | 45.0% | |
| AAAGACAGGGACCAAATTGG+TGG | + | chr5_3:27656974-27656993 | Msa0806920:intron | 45.0% | |
| TTCTCAGCTACCTAGAATCC+AGG | + | chr5_3:27657476-27657495 | Msa0806920:intron | 45.0% | |
| GCTACCTAGAATCCAGGTAA+CGG | + | chr5_3:27657482-27657501 | Msa0806920:intron | 45.0% | |
| AGATATTATGGCCTGAAGCG+TGG | + | chr5_3:27657516-27657535 | Msa0806920:CDS | 45.0% | |
| TAACAACTTGTCCACGCTTC+AGG | - | chr5_3:27657530-27657549 | Msa0806910:intron | 45.0% | |
| TATCTTCCTGCAGTCTCACT+TGG | - | chr5_3:27657564-27657583 | Msa0806910:intron | 45.0% | |
| TGTTAGCCCTCCTATTCCTA+GGG | + | chr5_3:27657713-27657732 | Msa0806920:three_prime_UTR | 45.0% | |
| ATCGTTCCCTAGGAATAGGA+GGG | - | chr5_3:27657722-27657741 | Msa0806910:intron | 45.0% | |
| TCTCGAACTCCAGATTACCA+AGG | - | chr5_3:27657746-27657765 | Msa0806910:intron | 45.0% | |
| TGAGTTCGAAATCACCGACG+AGG | - | chr5_3:27653794-27653813 | Msa0806910:intron | 50.0% | |
| !! | ACACCGACTTTGGCTTCTTC+AGG | - | chr5_3:27653930-27653949 | Msa0806910:intron | 50.0% |
| ATGTGTCCTTCTAGTCCGAG+AGG | + | chr5_3:27654223-27654242 | Msa0806920:intron | 50.0% | |
| AACGAGATGACCAGCACAGA+GGG | - | chr5_3:27654999-27655018 | Msa0806910:intron | 50.0% | |
| GATCAGCGGAAACGTCCAAA+AGG | - | chr5_3:27655025-27655044 | Msa0806910:intron | 50.0% | |
| GCAAGGAAGCTTGATGTTGC+AGG | - | chr5_3:27655141-27655160 | Msa0806910:intron | 50.0% | |
| CGCCTTTCTTACCTTCCGTT+TGG | - | chr5_3:27655596-27655615 | Msa0806910:intron | 50.0% | |
| !! | GAGTCTTCAGCTGGTTCTAC+TGG | - | chr5_3:27655955-27655974 | Msa0806910:intron | 50.0% |
| TCGGATTAACGCATCTACGC+AGG | - | chr5_3:27655991-27656010 | Msa0806910:intron | 50.0% | |
| TGATAGTCCTGAGTACAGGC+GGG | + | chr5_3:27656454-27656473 | Msa0806920:intron | 50.0% | |
| GGATCCGTTACCTGGATTCT+AGG | - | chr5_3:27657489-27657508 | Msa0806910:intron | 50.0% | |
| TTGCAACAGGATCCGTTACC+TGG | - | chr5_3:27657497-27657516 | Msa0806910:intron | 50.0% | |
| GTGTTAGCCCTCCTATTCCT+AGG | + | chr5_3:27657712-27657731 | Msa0806920:three_prime_UTR | 50.0% | |
| CATCGTTCCCTAGGAATAGG+AGG | - | chr5_3:27657723-27657742 | Msa0806910:intron | 50.0% | |
| ! | AGGCATCGTTCCCTAGGAAT+AGG | - | chr5_3:27657726-27657745 | Msa0806910:intron | 50.0% |
| ATTCCTAGGGAACGATGCCT+TGG | + | chr5_3:27657726-27657745 | Msa0806920:three_prime_UTR | 50.0% | |
| !! | TTACCAAGGCATCGTTCCCT+AGG | - | chr5_3:27657732-27657751 | Msa0806910:intron | 50.0% |
| ! | GGAACGATGCCTTGGTAATC+TGG | + | chr5_3:27657734-27657753 | Msa0806920:three_prime_UTR | 50.0% |
| CACCACCACCAAGAAGACGA+TGG | + | chr5_3:27653692-27653711 | Msa0806920:exon | 55.0% | |
| CACCATCGTCTTCTTGGTGG+TGG | - | chr5_3:27653697-27653716 | Msa0806910:intron | 55.0% | |
| ! | CAGACACCTCTCGGACTAGA+AGG | - | chr5_3:27654232-27654251 | Msa0806910:intron | 55.0% |
| GCACAAGCACAGACACCTCT+CGG | - | chr5_3:27654241-27654260 | Msa0806910:intron | 55.0% | |
| GTGTGTGTGTGTGTGTGTGC+AGG | + | chr5_3:27654280-27654299 | Msa0806920:intron | 55.0% | |
| TGTGTGTGTGTGTGTGCAGG+AGG | + | chr5_3:27654283-27654302 | Msa0806920:intron | 55.0% | |
| TTGCCTATTCCCCTCTGTGC+TGG | + | chr5_3:27654986-27655005 | Msa0806920:intron | 55.0% | |
| TGACCAGCACAGAGGGGAAT+AGG | - | chr5_3:27654992-27655011 | Msa0806910:intron | 55.0% | |
| ACGAGATGACCAGCACAGAG+GGG | - | chr5_3:27654998-27655017 | Msa0806910:intron | 55.0% | |
| GAACGAGATGACCAGCACAG+AGG | - | chr5_3:27655000-27655019 | Msa0806910:intron | 55.0% | |
| ACACAAACCCGCCTGTACTC+AGG | - | chr5_3:27656464-27656483 | Msa0806910:intron | 55.0% | |
| TTCCTGCAGTCTCACTTGGC+CGG | - | chr5_3:27657560-27657579 | Msa0806910:intron | 55.0% | |
| !! | CTTGGTGGTGGTGTCGCAGA+AGG | - | chr5_3:27653685-27653704 | Msa0806910:intron | 60.0% |
| GTGTGTGTGTGTGCAGGAGG+CGG | + | chr5_3:27654286-27654305 | Msa0806920:intron | 60.0% | |
| GTTGAGTGGACGGAGCCAGA+CGG | - | chr5_3:27655773-27655792 | Msa0806910:intron | 60.0% | |
| ATCCGGCCAAGTGAGACTGC+AGG | + | chr5_3:27657555-27657574 | Msa0806920:CDS | 60.0% | |
| TGTGCAGGAGGCGGAGTTGC+TGG | + | chr5_3:27654295-27654314 | Msa0806920:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 27653540 | 27657975 | 27653540 | ID=Msa0806920;Name=Msa0806920 |
| chr5_3 | mRNA | 27653540 | 27657975 | 27653540 | ID=Msa0806920-mRNA-1;Parent=Msa0806920;Name=Msa0806920-mRNA-1;_AED=0.14;_eAED=0.14;_QI=171|0.33|0.75|0.75|1|1|4|367|236 |
| chr5_3 | exon | 27653540 | 27654091 | 27653540 | ID=Msa0806920-mRNA-1:exon:9762;Parent=Msa0806920-mRNA-1 |
| chr5_3 | exon | 27654302 | 27654415 | 27654302 | ID=Msa0806920-mRNA-1:exon:9763;Parent=Msa0806920-mRNA-1 |
| chr5_3 | exon | 27655228 | 27655317 | 27655228 | ID=Msa0806920-mRNA-1:exon:9764;Parent=Msa0806920-mRNA-1 |
| chr5_3 | exon | 27657483 | 27657975 | 27657483 | ID=Msa0806920-mRNA-1:exon:9765;Parent=Msa0806920-mRNA-1 |
| chr5_3 | five_prime_UTR | 27653540 | 27653710 | 27653540 | ID=Msa0806920-mRNA-1:five_prime_utr;Parent=Msa0806920-mRNA-1 |
| chr5_3 | CDS | 27653711 | 27654091 | 27653711 | ID=Msa0806920-mRNA-1:cds;Parent=Msa0806920-mRNA-1 |
| chr5_3 | CDS | 27654302 | 27654415 | 27654302 | ID=Msa0806920-mRNA-1:cds;Parent=Msa0806920-mRNA-1 |
| chr5_3 | CDS | 27655228 | 27655317 | 27655228 | ID=Msa0806920-mRNA-1:cds;Parent=Msa0806920-mRNA-1 |
| chr5_3 | CDS | 27657483 | 27657608 | 27657483 | ID=Msa0806920-mRNA-1:cds;Parent=Msa0806920-mRNA-1 |
| chr5_3 | three_prime_UTR | 27657609 | 27657975 | 27657609 | ID=Msa0806920-mRNA-1:three_prime_utr;Parent=Msa0806920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
