AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1397080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397080 MtrunA17_Chr3g0127461 98.730 551 7 0 1 551 1 551 0.0 1113
Msa1397080 MtrunA17_Chr1g0146661 64.366 536 129 3 65 545 62 590 0.0 683
Msa1397080 MtrunA17_Chr2g0329651 30.000 290 168 5 175 460 259 517 2.81e-34 137
Msa1397080 MtrunA17_Chr2g0329651 42.105 95 53 2 66 159 43 136 2.05e-12 70.1
Msa1397080 MtrunA17_Chr4g0064141 33.505 194 109 1 345 538 459 632 2.10e-32 132
Msa1397080 MtrunA17_Chr2g0319591 33.040 227 122 5 340 536 206 432 2.56e-29 120
Msa1397080 MtrunA17_Chr2g0319591 39.333 150 72 8 61 193 24 171 1.66e-16 82.0
Msa1397080 MtrunA17_Chr4g0041821 32.243 214 117 4 340 525 202 415 5.42e-29 119
Msa1397080 MtrunA17_Chr1g0183581 40.800 125 72 1 338 460 187 311 1.67e-27 115
Msa1397080 MtrunA17_Chr1g0183581 39.326 89 51 2 69 156 45 131 3.03e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397080 AT3G49350.1 65.779 526 157 8 29 550 32 538 0.0 643
Msa1397080 AT5G24390.1 61.804 521 175 8 29 545 23 523 0.0 605
Msa1397080 AT5G53570.1 60.076 526 160 9 29 545 58 542 0.0 603
Msa1397080 AT5G53570.2 60.076 526 160 9 29 545 85 569 0.0 603
Msa1397080 AT5G41940.1 59.229 493 186 5 53 544 71 549 0.0 578
Msa1397080 AT2G43490.6 30.085 472 247 15 63 460 38 500 1.08e-49 183
Msa1397080 AT2G43490.8 30.085 472 247 15 63 460 38 500 1.08e-49 183
Msa1397080 AT2G43490.1 30.043 466 243 15 69 460 48 504 3.23e-49 182
Msa1397080 AT2G43490.7 30.043 466 243 15 69 460 48 504 3.23e-49 182
Msa1397080 AT2G43490.3 30.043 466 243 15 69 460 48 504 3.23e-49 182
Msa1397080 AT2G43490.2 30.043 466 243 15 69 460 48 504 3.23e-49 182
Msa1397080 AT2G43490.4 30.043 466 243 15 69 460 48 504 3.36e-49 182
Msa1397080 AT2G43490.5 30.043 466 243 15 69 460 48 504 3.42e-49 181
Msa1397080 AT5G52580.2 28.958 259 151 3 289 538 423 657 3.40e-32 132
Msa1397080 AT5G52580.1 28.958 259 151 3 289 538 406 640 4.16e-32 131
Msa1397080 AT5G52580.3 28.958 259 151 3 289 538 412 646 4.26e-32 131
Msa1397080 AT4G28550.1 32.766 235 129 4 340 549 191 421 1.19e-31 127
Msa1397080 AT4G28550.1 34.211 114 67 3 55 168 31 136 1.73e-13 73.2
Msa1397080 AT3G59570.1 43.443 122 68 1 340 460 387 508 4.61e-30 125
Msa1397080 AT3G59570.1 43.333 90 49 2 69 158 48 135 1.55e-15 80.5
Msa1397080 AT3G59570.2 43.443 122 68 1 340 460 387 508 4.65e-30 125
Msa1397080 AT3G59570.2 43.333 90 49 2 69 158 48 135 1.60e-15 80.1
Msa1397080 AT3G59570.3 43.443 122 68 1 340 460 387 508 5.05e-30 125
Msa1397080 AT3G59570.3 43.333 90 49 2 69 158 48 135 1.51e-15 80.5
Msa1397080 AT2G20440.4 30.638 235 134 4 340 549 75 305 4.98e-29 117
Msa1397080 AT5G54780.1 46.400 125 65 1 338 460 193 317 1.72e-28 118
Msa1397080 AT2G20440.1 30.638 235 134 4 340 549 191 421 1.98e-28 118
Msa1397080 AT2G20440.1 32.174 115 65 3 69 183 40 141 4.37e-14 75.1
Msa1397080 AT2G20440.2 30.638 235 134 4 340 549 191 421 1.98e-28 118
Msa1397080 AT2G20440.2 32.174 115 65 3 69 183 40 141 4.37e-14 75.1
Msa1397080 AT4G27100.2 40.940 149 80 3 319 460 172 319 1.61e-27 115
Msa1397080 AT4G27100.1 40.940 149 80 3 319 460 172 319 2.20e-27 115
Msa1397080 AT4G28550.2 44.167 120 65 1 340 457 191 310 6.59e-26 108
Msa1397080 AT4G28550.2 34.211 114 67 3 55 168 31 136 8.93e-14 73.2
Msa1397080 AT4G28550.3 43.697 119 65 1 340 456 191 309 1.26e-25 108
Msa1397080 AT4G28550.3 34.211 114 67 3 55 168 31 136 1.25e-13 72.8
Msa1397080 AT2G20440.3 41.322 121 69 1 340 458 191 311 1.03e-23 103
Msa1397080 AT2G20440.3 31.061 132 73 4 55 186 31 144 2.77e-14 75.1

Find 220 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGGCAGTAGCCAATTTC+AGG 0.187920 tig0022126:+35356 None:intergenic
CGATAGTGTTGTGGCTTAAA+AGG 0.207241 tig0022126:-34589 Msa1397080:three_prime_UTR
CCTTGATGTTTGGAAGCTTC+TGG 0.224318 tig0022126:-34847 Msa1397080:CDS
GATCGATGTGCCCTACTTTC+TGG 0.228898 tig0022126:+35482 None:intergenic
TCGTTCATTTGAGGAAATTT+TGG 0.229647 tig0022126:+38663 None:intergenic
ATCGAAAGATCTTTACTTAC+AGG 0.240820 tig0022126:-34723 Msa1397080:three_prime_UTR
AAAAGGCCAGGCAGAATTTC+AGG 0.242883 tig0022126:-35253 Msa1397080:CDS
GGCATCAGCGTTGCTGCTGC+TGG 0.251232 tig0022126:+35763 None:intergenic
GCACTATACGACCCTGAAAT+TGG 0.254237 tig0022126:-35368 Msa1397080:CDS
TTCCCACCTGTTTAGGCATT+TGG 0.272963 tig0022126:-35168 Msa1397080:CDS
TCTGATACAACACTAATTAT+AGG 0.273095 tig0022126:+35314 None:intergenic
CTCTGATTTGAGACCCATTT+CGG 0.287748 tig0022126:-34470 Msa1397080:three_prime_UTR
TCATCTGAATATTCAAAATC+TGG 0.290685 tig0022126:+35821 None:intergenic
CCTTTCCCTATATGTTTGTT+GGG 0.304865 tig0022126:+39180 None:intergenic
TTGAACAGACTCTCTGCCTT+TGG 0.315646 tig0022126:-35073 Msa1397080:CDS
TATAACATCTCTTTCTTGTT+TGG 0.318362 tig0022126:+36187 None:intergenic
TTAAGGATTCCCACCTGTTT+AGG 0.320777 tig0022126:-35175 Msa1397080:CDS
TCCTTTCCCTATATGTTTGT+TGG 0.322759 tig0022126:+39179 None:intergenic
TGCTGAGGCTGTTGGCTTGA+AGG 0.329038 tig0022126:-35459 Msa1397080:CDS
AAAGGGGATTGAAGTTAGTT+AGG 0.336531 tig0022126:-34571 Msa1397080:three_prime_UTR
CAGACATTTCCTTCTGATGA+TGG 0.342218 tig0022126:-35683 Msa1397080:CDS
CAGAAGATCACGAGGCATTC+TGG 0.343497 tig0022126:-35295 Msa1397080:CDS
ATTCACTTTGTTTACAAAAT+CGG 0.343955 tig0022126:+38571 None:intergenic
GAAGTTTGGCCTTTCCTACT+TGG 0.347842 tig0022126:-36623 Msa1397080:CDS
CGAATAAAACCGAACGCAAA+TGG 0.352771 tig0022126:+38439 None:intergenic
CCTCTCCCCAACAAACATAT+AGG 0.352903 tig0022126:-39186 Msa1397080:five_prime_UTR
CGCGTCGCCGTCTTCTTCTA+TGG 0.353870 tig0022126:-38702 Msa1397080:five_prime_UTR
TGGCAGGACACCTTGATGTT+TGG 0.354263 tig0022126:-34857 Msa1397080:CDS
GTAAACAAAGTGAATATAGA+AGG 0.359104 tig0022126:-38563 Msa1397080:five_prime_UTR
ACAGCTTGAGAGGGAGAGTA+TGG 0.383357 tig0022126:+35509 None:intergenic
ATGTTATACGAACTCAAAAT+AGG 0.383420 tig0022126:-36172 Msa1397080:intron
TGCACCTACCCACCTGCTTT+AGG 0.385304 tig0022126:+34431 None:intergenic
CAATGCCAAGACAACTTCTA+AGG 0.390521 tig0022126:-35648 Msa1397080:CDS
GCTGTTGGCGTTCAAGTTAG+TGG 0.392844 tig0022126:+38836 None:intergenic
GACGGCGACGCGAGCGATGC+CGG 0.393247 tig0022126:+38713 None:intergenic
CTCTCCCCAACAAACATATA+GGG 0.395918 tig0022126:-39185 Msa1397080:five_prime_UTR
GGGTTTATTAAAACGAATCT+TGG 0.400334 tig0022126:-34654 Msa1397080:three_prime_UTR
TTGTTGGGGAGAGGTTGTTT+TGG 0.402605 tig0022126:+39195 None:intergenic
GAGTTCAGATTCAGTCAAAA+AGG 0.404359 tig0022126:+34356 None:intergenic
GATCTTTACTTACAGGCTGC+TGG 0.405567 tig0022126:-34716 Msa1397080:three_prime_UTR
GCAGCAATCAGAGCTGGTAT+AGG 0.405908 tig0022126:-35029 Msa1397080:CDS
TGAACAGACTCTCTGCCTTT+GGG 0.407409 tig0022126:-35072 Msa1397080:CDS
AAAATAAGCACTGCAAAGCC+TGG 0.409362 tig0022126:-34675 Msa1397080:three_prime_UTR
TACGTATCAACTGCGGTCAT+TGG 0.413302 tig0022126:+34766 None:intergenic
TTGAAATTGAAAGGAAGAAA+AGG 0.413610 tig0022126:+34499 None:intergenic
GCATCAGCGTTGCTGCTGCT+GGG 0.413973 tig0022126:+35764 None:intergenic
ATTTCCTTCTGATGATGGTC+TGG 0.416866 tig0022126:-35678 Msa1397080:CDS
CTAGTATCAGAGCTGAAGTT+TGG 0.421208 tig0022126:-36637 Msa1397080:CDS
GATAGTGTTGTGGCTTAAAA+GGG 0.421334 tig0022126:-34588 Msa1397080:three_prime_UTR
CCCACTGGAAAGGGATTCTC+TGG 0.421918 tig0022126:+35853 None:intergenic
CAGCAATCAGAGCTGGTATA+GGG 0.423002 tig0022126:-35028 Msa1397080:CDS
AAGGTGTACTCACTCCGAAA+TGG 0.425729 tig0022126:+34456 None:intergenic
GCTCTGTTCCCCACTGGAAA+GGG 0.427085 tig0022126:+35844 None:intergenic
GAAGGGTGACCACCAAGTTA+TGG 0.427485 tig0022126:+34817 None:intergenic
CAAACTTCAGCTCTGATACT+AGG 0.427591 tig0022126:+36638 None:intergenic
GAGCATCATCTCCTTCCAAC+AGG 0.427621 tig0022126:+35786 None:intergenic
AAGGGTGACCACCAAGTTAT+GGG 0.433218 tig0022126:+34818 None:intergenic
GCTTCTCCAAATGCCTAAAC+AGG 0.435797 tig0022126:+35162 None:intergenic
CCTATATGTTTGTTGGGGAG+AGG 0.436430 tig0022126:+39186 None:intergenic
CGCGCTCATGAAAGAGAACT+TGG 0.439192 tig0022126:+38779 None:intergenic
CCCTGAAATTGGCTACTGCC+AGG 0.439699 tig0022126:-35357 Msa1397080:CDS
GCTGTTGGCTTGAAGGATTA+TGG 0.440935 tig0022126:-35452 Msa1397080:CDS
AATCTGCCTGGAGCAGAATT+AGG 0.441068 tig0022126:-35004 Msa1397080:CDS
GGCTCTGTTCCCCACTGGAA+AGG 0.446047 tig0022126:+35843 None:intergenic
TCACCGATCAGAGGATGAAC+AGG 0.462137 tig0022126:+38383 None:intergenic
ATCGTGGATCCATTTGCGTT+CGG 0.465633 tig0022126:-38448 Msa1397080:CDS
ATAACAGATCGCTCATACCC+TGG 0.469354 tig0022126:+35339 None:intergenic
CGTCGGAGAAGAATGGAGTT+TGG 0.470696 tig0022126:+38814 None:intergenic
ATCAAGCCTGAAATTCTGCC+TGG 0.473868 tig0022126:+35247 None:intergenic
CTTGGCAGCGGCGGCGCCGT+CGG 0.475335 tig0022126:+38797 None:intergenic
CTTGCTGCATCTTCAGAACT+AGG 0.479473 tig0022126:+35878 None:intergenic
ACTATCCTTAGAAGTTGTCT+TGG 0.481401 tig0022126:+35643 None:intergenic
TACCCACCTGCTTTAGGAAA+AGG 0.484534 tig0022126:+34437 None:intergenic
CGATCGCGGATTCTCCCGTC+GGG 0.485149 tig0022126:+36795 None:intergenic
AGGTGTACTCACTCCGAAAT+GGG 0.485547 tig0022126:+34457 None:intergenic
CATCGATCTGCTGAGGCTGT+TGG 0.485665 tig0022126:-35467 Msa1397080:CDS
TTGATGAGGTGGGTATTAGA+AGG 0.486537 tig0022126:-35229 Msa1397080:CDS
ACGCTGCCTAATTCTGCTCC+AGG 0.490066 tig0022126:+34998 None:intergenic
CAACTTAAAGCTCCCACTGT+TGG 0.493755 tig0022126:+35964 None:intergenic
TAGGCATTTGGAGAAGCTCC+AGG 0.494322 tig0022126:-35156 Msa1397080:CDS
ACGGAATGCAATGGCATGGC+AGG 0.494458 tig0022126:-34873 Msa1397080:CDS
GGAATCATTTCATAAGAAGA+AGG 0.494875 tig0022126:-38922 Msa1397080:five_prime_UTR
CAGCCTCAGTGTTACAAAGA+AGG 0.497992 tig0022126:-34938 Msa1397080:CDS
ATCTGGGCTCTGTTCCCCAC+TGG 0.498167 tig0022126:+35838 None:intergenic
ATCTCCTTCCAACAGGGAAA+CGG 0.498807 tig0022126:+35793 None:intergenic
GGTGGCCACCTCTCCGACTA+CGG 0.499988 tig0022126:-38757 Msa1397080:five_prime_UTR
TGGTGGTAGTATTGTTCAGA+AGG 0.501178 tig0022126:-35106 Msa1397080:CDS
GAGTTTATTTAATCTTTGAC+TGG 0.501315 tig0022126:-34284 Msa1397080:three_prime_UTR
TGATCCATCCGTTTCCCTGT+TGG 0.502365 tig0022126:-35801 Msa1397080:CDS
GAATTGTTACTTCTTCTAAG+AGG 0.504212 tig0022126:+38522 None:intergenic
AAGCAATAGTACAAAATAAG+TGG 0.505550 tig0022126:-39053 Msa1397080:five_prime_UTR
TTTGGAGAAGCTCCAGGCCG+AGG 0.506505 tig0022126:-35150 Msa1397080:CDS
GCGGCGCCGTCGGAGAAGAA+TGG 0.509511 tig0022126:+38807 None:intergenic
CTTTGTTTACAAAATCGGAA+TGG 0.511043 tig0022126:+38576 None:intergenic
GATTGCGATTCGTTCATTTG+AGG 0.516123 tig0022126:+38654 None:intergenic
CTTTCCCTATATGTTTGTTG+GGG 0.516444 tig0022126:+39181 None:intergenic
CTGGTATAGGGAAATCTGCC+TGG 0.516875 tig0022126:-35016 Msa1397080:CDS
TCAGAGTGAAGAATTGAGCT+AGG 0.518372 tig0022126:+38623 None:intergenic
GTGGGTCAACACTACGAAGT+AGG 0.518405 tig0022126:-35598 Msa1397080:CDS
TCTGGATGATGCCCATAACT+TGG 0.518938 tig0022126:-34829 Msa1397080:CDS
AGGGAGATAGTATAATAGAG+AGG 0.519906 tig0022126:+39095 None:intergenic
AAGCTGTTGTTCCAGAAAGT+AGG 0.520433 tig0022126:-35493 Msa1397080:CDS
GAATTTCAGGCTTGATGAGG+TGG 0.520596 tig0022126:-35240 Msa1397080:CDS
CTGCCTTTGGGAAGTAATGT+GGG 0.522221 tig0022126:-35060 Msa1397080:CDS
CAGCATGGATGATATCCTTA+CGG 0.525092 tig0022126:-34892 Msa1397080:CDS
TGGAAAGGAACATGGAGGAG+AGG 0.528342 tig0022126:+38856 None:intergenic
TTCTGGAACAACAGCTTGAG+AGG 0.528518 tig0022126:+35499 None:intergenic
TCAGAGGATGAACAGGAAGC+TGG 0.529598 tig0022126:+38390 None:intergenic
TCTGCCTTTGGGAAGTAATG+TGG 0.532088 tig0022126:-35061 Msa1397080:CDS
AGCTGTTGTTCCAGAAAGTA+GGG 0.534724 tig0022126:-35492 Msa1397080:CDS
TGACCCACCTTTCATTTGTG+AGG 0.535259 tig0022126:+35613 None:intergenic
GAGTTGAAATTGAAATTGAA+AGG 0.536691 tig0022126:+34490 None:intergenic
GGGAGATAGTATAATAGAGA+GGG 0.537268 tig0022126:+39096 None:intergenic
GACCCACCTTTCATTTGTGA+GGG 0.537428 tig0022126:+35614 None:intergenic
AGCAATAAATCGTCTGTTGG+TGG 0.537984 tig0022126:+34972 None:intergenic
GGATGAACAGGAAGCTGGTG+AGG 0.538603 tig0022126:+38395 None:intergenic
TGGGTCAACACTACGAAGTA+GGG 0.538976 tig0022126:-35597 Msa1397080:CDS
CTTTAGTTTCGATAGTGTTG+TGG 0.539527 tig0022126:-34598 Msa1397080:three_prime_UTR
CATCTGAATATTCAAAATCT+GGG 0.541125 tig0022126:+35822 None:intergenic
GGAATTTCATTCCACGATCG+CGG 0.541952 tig0022126:+36781 None:intergenic
ACGATCGCGGATTCTCCCGT+CGG 0.548417 tig0022126:+36794 None:intergenic
CTCCCTCACAAATGAAAGGT+GGG 0.548448 tig0022126:-35616 Msa1397080:CDS
CCATGCTGCTATACTTCTCA+AGG 0.550937 tig0022126:+34907 None:intergenic
GACAATAATTGTAATTGTCG+AGG 0.552929 tig0022126:+34378 None:intergenic
GGAAATGTCTGAAATACCTC+GGG 0.554770 tig0022126:+35695 None:intergenic
CCTGGCAGTAGCCAATTTCA+GGG 0.555580 tig0022126:+35357 None:intergenic
GATTATGGTCACCTAGATGC+TGG 0.557305 tig0022126:-35437 Msa1397080:CDS
CCTGAAATTGGCTACTGCCA+GGG 0.558212 tig0022126:-35356 Msa1397080:CDS
CTTCCTGTTCATCCTCTGAT+CGG 0.558257 tig0022126:-38386 Msa1397080:intron
ATCTTTAAGAGTCAAAGGAT+TGG 0.561098 tig0022126:+34332 None:intergenic
GATCAAGCAGCAATCAGAGC+TGG 0.564321 tig0022126:-35035 Msa1397080:CDS
AATTGAAAGGAAGAAAAGGA+TGG 0.564360 tig0022126:+34503 None:intergenic
CGATACAGATTCCACTGACT+CGG 0.565217 tig0022126:-35732 Msa1397080:CDS
TCGGCATCTTTAAGAGTCAA+AGG 0.566636 tig0022126:+34327 None:intergenic
GAAAGAGAACTTGGCAGCGG+CGG 0.568292 tig0022126:+38788 None:intergenic
GAATTCGATGATGATGAAGA+AGG 0.568885 tig0022126:+38471 None:intergenic
ATACTATCTCCCTTCGTAGT+GGG 0.569567 tig0022126:-39085 Msa1397080:five_prime_UTR
TCTCCAAATGCCTAAACAGG+TGG 0.570063 tig0022126:+35165 None:intergenic
AACTGCTAAAATCCAACAGT+GGG 0.570157 tig0022126:-35976 Msa1397080:CDS
GACGGGAGAATCCGCGATCG+TGG 0.570960 tig0022126:-36792 Msa1397080:CDS
ATAGGTGAAGTCAACTATGA+AGG 0.571069 tig0022126:-35935 Msa1397080:CDS
GAAGAATGGAGTTTGGCTGT+TGG 0.571123 tig0022126:+38821 None:intergenic
TTCTGAGGAATCCGAGTCAG+TGG 0.572266 tig0022126:+35721 None:intergenic
AAAAGCAATAAATCGTCTGT+TGG 0.573940 tig0022126:+34969 None:intergenic
CAGTACGTGCCAATGCAGAA+TGG 0.574385 tig0022126:-35535 Msa1397080:CDS
CAAGTTAGTGGAAAGGAACA+TGG 0.574857 tig0022126:+38848 None:intergenic
AGCTTTAAGTTGATTGACAT+AGG 0.577688 tig0022126:-35953 Msa1397080:CDS
CCATCCGTTTCCCTGTTGGA+AGG 0.578648 tig0022126:-35797 Msa1397080:CDS
AAATAAGCACTGCAAAGCCT+GGG 0.578742 tig0022126:-34674 Msa1397080:three_prime_UTR
GTCAGTGGAATCTGTATCGA+GGG 0.579303 tig0022126:+35736 None:intergenic
CCAGAAGCTTCCAAACATCA+AGG 0.579998 tig0022126:+34847 None:intergenic
CACCGCCGTAGTCGGAGAGG+TGG 0.580700 tig0022126:+38752 None:intergenic
GTGAAAAGCACCGCCGTAGT+CGG 0.581358 tig0022126:+38744 None:intergenic
TCTCCCTCACAAATGAAAGG+TGG 0.583366 tig0022126:-35617 Msa1397080:CDS
CCCAACAAACATATAGGGAA+AGG 0.583773 tig0022126:-39180 Msa1397080:five_prime_UTR
TTGTCTCTCTCCCACTACGA+AGG 0.585901 tig0022126:+39075 None:intergenic
AAATACCTCGGGACTTTCTG+AGG 0.586290 tig0022126:+35706 None:intergenic
GTATGGCATCCATTCTGCAT+TGG 0.588420 tig0022126:+35526 None:intergenic
TCTTCTCCCTCACAAATGAA+AGG 0.589731 tig0022126:-35620 Msa1397080:CDS
CCAGAGAATCCCTTTCCAGT+GGG 0.590141 tig0022126:-35853 Msa1397080:CDS
CAAGTTCTCTTTCATGAGCG+CGG 0.590204 tig0022126:-38778 Msa1397080:five_prime_UTR
CAGAGTGAAGAATTGAGCTA+GGG 0.591888 tig0022126:+38624 None:intergenic
ACTTGATATGCTTACTCAGT+CGG 0.592478 tig0022126:+34308 None:intergenic
AGAATGCTTACACTCCAAGT+AGG 0.593658 tig0022126:+36609 None:intergenic
GCAGTTGTCGGCATTGTCTG+CGG 0.593769 tig0022126:+35993 None:intergenic
ATCGCGGATTCTCCCGTCGG+GGG 0.595937 tig0022126:+36797 None:intergenic
GCAGAATTTCAGGCTTGATG+AGG 0.597261 tig0022126:-35243 Msa1397080:CDS
CCATGCCATTGCATTCCGTA+AGG 0.597871 tig0022126:+34877 None:intergenic
GGATGATGCCCATAACTTGG+TGG 0.598717 tig0022126:-34826 Msa1397080:CDS
AGGAAATGTCTGAAATACCT+CGG 0.600009 tig0022126:+35694 None:intergenic
TAAAGATCATAAATAAGCAG+TGG 0.600733 tig0022126:+34616 None:intergenic
CTCCAAATGCCTAAACAGGT+GGG 0.604678 tig0022126:+35166 None:intergenic
GAAGTCAACTATGAAGGAGA+TGG 0.604996 tig0022126:-35929 Msa1397080:CDS
GCTTACACTCCAAGTAGGAA+AGG 0.606813 tig0022126:+36614 None:intergenic
AATTTCAGGCTTGATGAGGT+GGG 0.609387 tig0022126:-35239 Msa1397080:CDS
GACTGAGTAAGCATATCAAG+TGG 0.610322 tig0022126:-34306 Msa1397080:three_prime_UTR
TCTGGAACAACAGCTTGAGA+GGG 0.610648 tig0022126:+35500 None:intergenic
GTGTCCTTTCTCCTCAACAA+TGG 0.613177 tig0022126:-36833 Msa1397080:CDS
TGGCGTTCAAGTTAGTGGAA+AGG 0.617167 tig0022126:+38841 None:intergenic
TCTTCCAGACCATCATCAGA+AGG 0.618152 tig0022126:+35674 None:intergenic
GCCAGAGAATCCCTTTCCAG+TGG 0.621665 tig0022126:-35854 Msa1397080:CDS
GGTGGTAGTATTGTTCAGAA+GGG 0.622086 tig0022126:-35105 Msa1397080:CDS
TATACTATCTCCCTTCGTAG+TGG 0.622916 tig0022126:-39086 Msa1397080:five_prime_UTR
AAGACTTTGCCACATGGCAA+CGG 0.623278 tig0022126:-35574 Msa1397080:CDS
GGAATCTGTATCGAGGGCAG+AGG 0.624799 tig0022126:+35742 None:intergenic
CCTTCCAACAGGGAAACGGA+TGG 0.626826 tig0022126:+35797 None:intergenic
CATGAAAGAGAACTTGGCAG+CGG 0.626990 tig0022126:+38785 None:intergenic
GTAGGGAAGACTTTGCCACA+TGG 0.627542 tig0022126:-35580 Msa1397080:CDS
AAACGAAGAACAATCGTGGA+GGG 0.628224 tig0022126:-38899 Msa1397080:five_prime_UTR
AGCATCATCTCCTTCCAACA+GGG 0.628935 tig0022126:+35787 None:intergenic
ATAGTGTTGTGGCTTAAAAG+GGG 0.631914 tig0022126:-34587 Msa1397080:three_prime_UTR
CCTTACGGAATGCAATGGCA+TGG 0.633745 tig0022126:-34877 Msa1397080:CDS
TGTCTCTCTCCCACTACGAA+GGG 0.634331 tig0022126:+39076 None:intergenic
GATATCCTTACGGAATGCAA+TGG 0.638476 tig0022126:-34882 Msa1397080:CDS
CCTTGAGAAGTATAGCAGCA+TGG 0.641797 tig0022126:-34907 Msa1397080:CDS
TCTTCTTCTATGGTGCAAGT+AGG 0.644901 tig0022126:-38692 Msa1397080:five_prime_UTR
AACGAAGAACAATCGTGGAG+GGG 0.647287 tig0022126:-38898 Msa1397080:five_prime_UTR
TAGGGCACATCGATCTGCTG+AGG 0.650584 tig0022126:-35474 Msa1397080:CDS
GTTCTCTTTCATGAGCGCGG+TGG 0.656781 tig0022126:-38775 Msa1397080:five_prime_UTR
CTGCCCACATTACTTCCCAA+AGG 0.659441 tig0022126:+35057 None:intergenic
CAAACTCCATTCTTCTCCGA+CGG 0.661554 tig0022126:-38813 Msa1397080:five_prime_UTR
AAGCACCGCCGTAGTCGGAG+AGG 0.664914 tig0022126:+38749 None:intergenic
GATCGCGGATTCTCCCGTCG+GGG 0.667812 tig0022126:+36796 None:intergenic
AAGGAAACGAAGAACAATCG+TGG 0.667872 tig0022126:-38903 Msa1397080:five_prime_UTR
AGTCAGTGGAATCTGTATCG+AGG 0.671427 tig0022126:+35735 None:intergenic
ACTTGCACCATAGAAGAAGA+CGG 0.674879 tig0022126:+38695 None:intergenic
TTTCCTTCTTTGTAACACTG+AGG 0.675398 tig0022126:+34935 None:intergenic
TCGGATGATCCGTTGCCATG+TGG 0.681927 tig0022126:+35565 None:intergenic
GGCCACCTCTCCGACTACGG+CGG 0.689019 tig0022126:-38754 Msa1397080:five_prime_UTR
TGGCACGTACTGCATCAAGT+CGG 0.689956 tig0022126:+35546 None:intergenic
CAGAGAATCCCTTTCCAGTG+GGG 0.692115 tig0022126:-35852 Msa1397080:CDS
CAACTGCTAAAATCCAACAG+TGG 0.696442 tig0022126:-35977 Msa1397080:CDS
GAAACGAAGAACAATCGTGG+AGG 0.701859 tig0022126:-38900 Msa1397080:five_prime_UTR
CATCATCATCGAATTCATCG+TGG 0.706692 tig0022126:-38464 Msa1397080:CDS
TGTTGTATCAGAAGATCACG+AGG 0.721800 tig0022126:-35303 Msa1397080:CDS
GGATTCCTCAGAAAGTCCCG+AGG 0.734543 tig0022126:-35711 Msa1397080:CDS
GTTAGTGGAAAGGAACATGG+AGG 0.744398 tig0022126:+38851 None:intergenic
AGTAGTTTACGTATCAACTG+CGG 0.754226 tig0022126:+34759 None:intergenic
TTCCTGAAAAGAGTTCGCAG+CGG 0.769164 tig0022126:-36762 Msa1397080:CDS
GAGGTCGTCTTAAATCACCG+TGG 0.833062 tig0022126:-36875 Msa1397080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATATATTTTTTTTTT+TGG - tig0022126:36402-36421 Msa1397080:intron 0.0%
!!! ATATATATATTTTTTTTTTT+GGG - tig0022126:36403-36422 Msa1397080:intron 0.0%
!!! AATGAAATAATATATTTTTC+TGG - tig0022126:36481-36500 Msa1397080:intron 10.0%
!!! ATGAAATAATATATTTTTCT+GGG - tig0022126:36482-36501 Msa1397080:intron 10.0%
!! AAAATAGAAAGAAAAAAAAT+TGG + tig0022126:37219-37238 None:intergenic 10.0%
!!! AAGTTTTGATTTTTATAAGA+AGG - tig0022126:35370-35389 Msa1397080:CDS 15.0%
!!! AGTTTTGATTTTTATAAGAA+GGG - tig0022126:35371-35390 Msa1397080:CDS 15.0%
!! CAAGTTATATAAAAATCAAA+AGG + tig0022126:35542-35561 None:intergenic 15.0%
!! TATTACAAGCAAAAATTTAT+GGG + tig0022126:35961-35980 None:intergenic 15.0%
!!! AAAAAATTAACTTGTTATGA+GGG + tig0022126:35999-36018 None:intergenic 15.0%
!!! AAAAAAATTAACTTGTTATG+AGG + tig0022126:36000-36019 None:intergenic 15.0%
!!! ATTTAATCATTTTAGCATTA+TGG - tig0022126:36193-36212 Msa1397080:CDS 15.0%
!!! TACATAAAAATATTTTAGTG+TGG - tig0022126:36230-36249 Msa1397080:intron 15.0%
!! CTAAATGATGTTTATTTATT+TGG - tig0022126:36921-36940 Msa1397080:intron 15.0%
!! AGAAAATATAATAAATGACA+AGG + tig0022126:37178-37197 None:intergenic 15.0%
!! CATTTATTTAGACATTTATA+TGG - tig0022126:37239-37258 Msa1397080:intron 15.0%
!!! TGTTTTGTTTTGTTTTGTTT+TGG + tig0022126:34498-34517 None:intergenic 20.0%
!!! AAAAAAAAAAACACGTTTTG+CGG - tig0022126:34550-34569 Msa1397080:three_prime_UTR 20.0%
!!! ATTCACTTTGTTTACAAAAT+CGG + tig0022126:34925-34944 None:intergenic 20.0%
!!! AATCAGCATATTTCTAATTT+TGG - tig0022126:35259-35278 Msa1397080:CDS 20.0%
!!! ATCAGCATATTTCTAATTTT+GGG - tig0022126:35260-35279 Msa1397080:CDS 20.0%
!!! GTTTTGATTTTTATAAGAAG+GGG - tig0022126:35372-35391 Msa1397080:CDS 20.0%
!! AAAATCCAAAACAAGATAAA+AGG + tig0022126:35515-35534 None:intergenic 20.0%
!! TATGATAAATTACCATGTTT+AGG - tig0022126:35584-35603 Msa1397080:CDS 20.0%
!! ATGATAAATTACCATGTTTA+GGG - tig0022126:35585-35604 Msa1397080:CDS 20.0%
!!! TAAGAAAGAAATGTTTTTTC+TGG - tig0022126:35752-35771 Msa1397080:CDS 20.0%
!!! TTAGTATTCTAGATATTTTC+TGG - tig0022126:35853-35872 Msa1397080:CDS 20.0%
!! TTAAATAGAGTAAAGAAAGA+GGG + tig0022126:35931-35950 None:intergenic 20.0%
!! TTTAAATAGAGTAAAGAAAG+AGG + tig0022126:35932-35951 None:intergenic 20.0%
!! CTATTACAAGCAAAAATTTA+TGG + tig0022126:35962-35981 None:intergenic 20.0%
!!! AATTTTTGCTTGTAATAGTT+TGG - tig0022126:35964-35983 Msa1397080:CDS 20.0%
!! TACATATGAAATCAAAATAC+TGG + tig0022126:36112-36131 None:intergenic 20.0%
!! TTTCATATGTACATTTATAG+AGG - tig0022126:36121-36140 Msa1397080:intron 20.0%
!! AAACATCATTTATGACATTT+AGG + tig0022126:36522-36541 None:intergenic 20.0%
!! ATGAAAGATCAAATACTAAT+GGG + tig0022126:37029-37048 None:intergenic 20.0%
!! TATGAAAGATCAAATACTAA+TGG + tig0022126:37030-37049 None:intergenic 20.0%
!! ATAGAAAGAAAAAAAATTGG+AGG + tig0022126:37216-37235 None:intergenic 20.0%
!!! TTTTGTTGGATTTATGAAAA+AGG - tig0022126:38223-38242 Msa1397080:intron 20.0%
!! TGCAAAAATAATCAAGTTTA+AGG - tig0022126:38301-38320 Msa1397080:intron 20.0%
!!! TATCTTCATTTTATCATGAA+GGG + tig0022126:38696-38715 None:intergenic 20.0%
!!! TCTCTGTTTTTTTTTTCTTT+TGG - tig0022126:38965-38984 Msa1397080:five_prime_UTR 20.0%
! AAGCAATAGTACAAAATAAG+TGG - tig0022126:34440-34459 Msa1397080:three_prime_UTR 25.0%
!!! TGTTTTGTTTTGTTTTGGTT+TGG + tig0022126:34493-34512 None:intergenic 25.0%
! GTAAACAAAGTGAATATAGA+AGG - tig0022126:34930-34949 Msa1397080:CDS 25.0%
!!! TCAGCATATTTCTAATTTTG+GGG - tig0022126:35261-35280 Msa1397080:CDS 25.0%
! AAAAGGACTAGATAATTAGA+GGG - tig0022126:35406-35425 Msa1397080:CDS 25.0%
!!! TCTCTATTTTGGTTTATTTG+CGG - tig0022126:35436-35455 Msa1397080:CDS 25.0%
!! AATTACATTTTCCCTAAACA+TGG + tig0022126:35599-35618 None:intergenic 25.0%
! CAAAATACAAAGCTAGAAAA+GGG + tig0022126:35659-35678 None:intergenic 25.0%
! TTTAAGTGAGTATGTTCATT+TGG - tig0022126:35724-35743 Msa1397080:CDS 25.0%
!!! TTGGTGTTTAACTTGATTTA+AGG - tig0022126:35789-35808 Msa1397080:CDS 25.0%
! ATCAAGCATTACAATTCTTT+AGG - tig0022126:35828-35847 Msa1397080:CDS 25.0%
! TATATTGTCTATGTAAGTTG+AGG - tig0022126:36152-36171 Msa1397080:intron 25.0%
! TATCATTTCATTACCGTTAA+TGG + tig0022126:36259-36278 None:intergenic 25.0%
!! GCTTGAATGTAAATAAGTTT+TGG + tig0022126:36562-36581 None:intergenic 25.0%
! CTGTTTAGATTTCAATTTAG+TGG - tig0022126:36773-36792 Msa1397080:CDS 25.0%
!!! TTTATTTATTTGGTGCATCT+AGG - tig0022126:36931-36950 Msa1397080:intron 25.0%
!!! TTTTTCAAAATTCAGTGTGA+TGG - tig0022126:37073-37092 Msa1397080:intron 25.0%
! TATAACATCTCTTTCTTGTT+TGG + tig0022126:37309-37328 None:intergenic 25.0%
! ATGTTATACGAACTCAAAAT+AGG - tig0022126:37321-37340 Msa1397080:intron 25.0%
! CTTGATTCATCATATTTCTT+TGG - tig0022126:37373-37392 Msa1397080:intron 25.0%
! AAACTGAACAAAAGGATAAA+GGG + tig0022126:37424-37443 None:intergenic 25.0%
! TAAACTGAACAAAAGGATAA+AGG + tig0022126:37425-37444 None:intergenic 25.0%
! AGTATGTTAAACTGAACAAA+AGG + tig0022126:37432-37451 None:intergenic 25.0%
! CATCTGAATATTCAAAATCT+GGG + tig0022126:37674-37693 None:intergenic 25.0%
! TCATCTGAATATTCAAAATC+TGG + tig0022126:37675-37694 None:intergenic 25.0%
! TCTGATACAACACTAATTAT+AGG + tig0022126:38182-38201 None:intergenic 25.0%
!! CTATCTTCATTTTATCATGA+AGG + tig0022126:38697-38716 None:intergenic 25.0%
! TAAAGATCATAAATAAGCAG+TGG + tig0022126:38880-38899 None:intergenic 25.0%
!! TAGTTAGGTTTTACATATCA+TGG - tig0022126:38937-38956 Msa1397080:five_prime_UTR 25.0%
! TTGAAATTGAAAGGAAGAAA+AGG + tig0022126:38997-39016 None:intergenic 25.0%
! GAGTTGAAATTGAAATTGAA+AGG + tig0022126:39006-39025 None:intergenic 25.0%
!!! TTGGTTTGGTTTTGATTTTG+AGG + tig0022126:34479-34498 None:intergenic 30.0%
GGAATCATTTCATAAGAAGA+AGG - tig0022126:34571-34590 Msa1397080:three_prime_UTR 30.0%
! TCGTTCATTTGAGGAAATTT+TGG + tig0022126:34833-34852 None:intergenic 30.0%
! CTTTGTTTACAAAATCGGAA+TGG + tig0022126:34920-34939 None:intergenic 30.0%
! GAATTGTTACTTCTTCTAAG+AGG + tig0022126:34974-34993 None:intergenic 30.0%
AAAAATGAAGTGAGAGAAAG+AGG + tig0022126:35151-35170 None:intergenic 30.0%
ATATCGAAAAATTCGAGATC+TGG + tig0022126:35207-35226 None:intergenic 30.0%
! TTTTTATAAGAAGGGGAAGA+AGG - tig0022126:35379-35398 Msa1397080:CDS 30.0%
! TTTTATAAGAAGGGGAAGAA+GGG - tig0022126:35380-35399 Msa1397080:CDS 30.0%
GAAAAGGACTAGATAATTAG+AGG - tig0022126:35405-35424 Msa1397080:CDS 30.0%
!! AAGCTCCTTTTATCTTGTTT+TGG - tig0022126:35507-35526 Msa1397080:CDS 30.0%
GCAAAATACAAAGCTAGAAA+AGG + tig0022126:35660-35679 None:intergenic 30.0%
TCTGGACAAAATCAAATCTT+TGG - tig0022126:35770-35789 Msa1397080:CDS 30.0%
!! AATTAACTTGTTATGAGGGA+GGG + tig0022126:35995-36014 None:intergenic 30.0%
!! AAATTAACTTGTTATGAGGG+AGG + tig0022126:35996-36015 None:intergenic 30.0%
TGTCAAGTGCTTATTTATGT+CGG - tig0022126:36043-36062 Msa1397080:intron 30.0%
TGGCTTATGAAAAGCTTATA+TGG + tig0022126:36078-36097 None:intergenic 30.0%
AATCAAAATACTGGTGAGTT+TGG + tig0022126:36103-36122 None:intergenic 30.0%
TTTAGTGTGGAATCCATTAA+CGG - tig0022126:36243-36262 Msa1397080:intron 30.0%
ACAATCACATTGGAAAAAAG+TGG + tig0022126:36346-36365 None:intergenic 30.0%
ACCAAGTATATCTATTTCAC+TGG - tig0022126:36437-36456 Msa1397080:intron 30.0%
TCCAGTGAAATAGATATACT+TGG + tig0022126:36441-36460 None:intergenic 30.0%
ATTCTTTGTGACAATTTCAG+AGG - tig0022126:36599-36618 Msa1397080:intron 30.0%
! AAAGGACACGTTTTCTTTTT+CGG + tig0022126:36649-36668 None:intergenic 30.0%
! GATTTCAATTTAGTGGCTTT+TGG - tig0022126:36780-36799 Msa1397080:CDS 30.0%
GAAATATGATGAATCAAGCA+TGG + tig0022126:37371-37390 None:intergenic 30.0%
!! AGCTTTAAGTTGATTGACAT+AGG - tig0022126:37540-37559 Msa1397080:intron 30.0%
!!! GTGAGTTTTATTCAAGATTC+TGG - tig0022126:37588-37607 Msa1397080:intron 30.0%
! AATTTTTCATGCTGCTAGAT+TGG - tig0022126:38082-38101 Msa1397080:intron 30.0%
AAAAGCAATAAATCGTCTGT+TGG + tig0022126:38527-38546 None:intergenic 30.0%
ATCGAAAGATCTTTACTTAC+AGG - tig0022126:38770-38789 Msa1397080:five_prime_UTR 30.0%
!! AGATTCGTTTTAATAAACCC+AGG + tig0022126:38839-38858 None:intergenic 30.0%
GGGTTTATTAAAACGAATCT+TGG - tig0022126:38839-38858 Msa1397080:five_prime_UTR 30.0%
AATTGAAAGGAAGAAAAGGA+TGG + tig0022126:38993-39012 None:intergenic 30.0%
GACAATAATTGTAATTGTCG+AGG + tig0022126:39118-39137 None:intergenic 30.0%
! ATCTTTAAGAGTCAAAGGAT+TGG + tig0022126:39164-39183 None:intergenic 30.0%
! CTTTCCCTATATGTTTGTTG+GGG + tig0022126:34315-34334 None:intergenic 35.0%
CCTTTCCCTATATGTTTGTT+GGG + tig0022126:34316-34335 None:intergenic 35.0%
TCCTTTCCCTATATGTTTGT+TGG + tig0022126:34317-34336 None:intergenic 35.0%
GGGAGATAGTATAATAGAGA+GGG + tig0022126:34400-34419 None:intergenic 35.0%
AGGGAGATAGTATAATAGAG+AGG + tig0022126:34401-34420 None:intergenic 35.0%
! GAATTCGATGATGATGAAGA+AGG + tig0022126:35025-35044 None:intergenic 35.0%
ACTGACACTGATAACAAGAT+CGG + tig0022126:35232-35251 None:intergenic 35.0%
! GTGTAGGAATGGTTAATTTG+TGG - tig0022126:35314-35333 Msa1397080:CDS 35.0%
! AGGGAGATAGATCTCTATTT+TGG - tig0022126:35425-35444 Msa1397080:CDS 35.0%
! CATAGACAACTTGATTTGAC+AGG + tig0022126:35568-35587 None:intergenic 35.0%
GTGATGATTGTGATCTTGAT+TGG - tig0022126:35624-35643 Msa1397080:CDS 35.0%
! ACAAAGCTAGAAAAGGGTTT+TGG + tig0022126:35653-35672 None:intergenic 35.0%
TTAGATCTTCCTAAGCTAGA+AGG - tig0022126:35680-35699 Msa1397080:CDS 35.0%
!! ATAGATCATCCTTCTAGCTT+AGG + tig0022126:35692-35711 None:intergenic 35.0%
! AAAGAGTTTGAGAGAGCATA+TGG + tig0022126:36024-36043 None:intergenic 35.0%
AAATACTGGTGAGTTTGGAT+TGG + tig0022126:36098-36117 None:intergenic 35.0%
TGATTGTAGAAAGCCACAAT+TGG - tig0022126:36359-36378 Msa1397080:intron 35.0%
! TTTTCCATTGTTGAGGAGAA+AGG + tig0022126:36667-36686 None:intergenic 35.0%
! AACAAGCTTTTCCATTGTTG+AGG + tig0022126:36674-36693 None:intergenic 35.0%
ATGCTATGAATGTATGATGC+AGG - tig0022126:36824-36843 Msa1397080:CDS 35.0%
TGCTATGAATGTATGATGCA+GGG - tig0022126:36825-36844 Msa1397080:CDS 35.0%
TCTGCTTCATGTTATGCATT+AGG - tig0022126:37138-37157 Msa1397080:intron 35.0%
!! TGTTGGATTTTAGCAGTTGT+CGG + tig0022126:37515-37534 None:intergenic 35.0%
AACTGCTAAAATCCAACAGT+GGG - tig0022126:37517-37536 Msa1397080:intron 35.0%
ATAGGTGAAGTCAACTATGA+AGG - tig0022126:37558-37577 Msa1397080:intron 35.0%
! AGGAAATGTCTGAAATACCT+CGG + tig0022126:37802-37821 None:intergenic 35.0%
ACTATCCTTAGAAGTTGTCT+TGG + tig0022126:37853-37872 None:intergenic 35.0%
TTGGATTTATGAAAAAGGCC+AGG - tig0022126:38228-38247 Msa1397080:intron 35.0%
GTAAACGAAAAAGCAATCCT+CGG + tig0022126:38363-38382 None:intergenic 35.0%
!!! AGGATTGCTTTTTCGTTTAC+AGG - tig0022126:38363-38382 Msa1397080:intron 35.0%
!!! TTGCTTTTTCGTTTACAGGA+TGG - tig0022126:38367-38386 Msa1397080:intron 35.0%
TTTCCTTCTTTGTAACACTG+AGG + tig0022126:38561-38580 None:intergenic 35.0%
AGTAGTTTACGTATCAACTG+CGG + tig0022126:38737-38756 None:intergenic 35.0%
! CTTTAGTTTCGATAGTGTTG+TGG - tig0022126:38895-38914 Msa1397080:five_prime_UTR 35.0%
GATAGTGTTGTGGCTTAAAA+GGG - tig0022126:38905-38924 Msa1397080:five_prime_UTR 35.0%
ATAGTGTTGTGGCTTAAAAG+GGG - tig0022126:38906-38925 Msa1397080:five_prime_UTR 35.0%
AAAGGGGATTGAAGTTAGTT+AGG - tig0022126:38922-38941 Msa1397080:five_prime_UTR 35.0%
GAGTTCAGATTCAGTCAAAA+AGG + tig0022126:39140-39159 None:intergenic 35.0%
ACTTGATATGCTTACTCAGT+CGG + tig0022126:39188-39207 None:intergenic 35.0%
CTCTCCCCAACAAACATATA+GGG - tig0022126:34308-34327 Msa1397080:three_prime_UTR 40.0%
CCCAACAAACATATAGGGAA+AGG - tig0022126:34313-34332 Msa1397080:three_prime_UTR 40.0%
TATACTATCTCCCTTCGTAG+TGG - tig0022126:34407-34426 Msa1397080:three_prime_UTR 40.0%
ATACTATCTCCCTTCGTAGT+GGG - tig0022126:34408-34427 Msa1397080:three_prime_UTR 40.0%
AAGGAAACGAAGAACAATCG+TGG - tig0022126:34590-34609 Msa1397080:three_prime_UTR 40.0%
AAACGAAGAACAATCGTGGA+GGG - tig0022126:34594-34613 Msa1397080:three_prime_UTR 40.0%
CAAGTTAGTGGAAAGGAACA+TGG + tig0022126:34648-34667 None:intergenic 40.0%
ACTTGCACCATAGAAGAAGA+CGG + tig0022126:34801-34820 None:intergenic 40.0%
TCTTCTTCTATGGTGCAAGT+AGG - tig0022126:34801-34820 Msa1397080:CDS 40.0%
GATTGCGATTCGTTCATTTG+AGG + tig0022126:34842-34861 None:intergenic 40.0%
CAGAGTGAAGAATTGAGCTA+GGG + tig0022126:34872-34891 None:intergenic 40.0%
TCAGAGTGAAGAATTGAGCT+AGG + tig0022126:34873-34892 None:intergenic 40.0%
CATCATCATCGAATTCATCG+TGG - tig0022126:35029-35048 Msa1397080:CDS 40.0%
CGAATAAAACCGAACGCAAA+TGG + tig0022126:35057-35076 None:intergenic 40.0%
AAGAAAAACTCACCGATCAG+AGG + tig0022126:35122-35141 None:intergenic 40.0%
! TTGTTCTGAGTGTGTAGGAA+TGG - tig0022126:35303-35322 Msa1397080:CDS 40.0%
TGATGTGTCACAAGTCTTCA+AGG - tig0022126:35887-35906 Msa1397080:CDS 40.0%
GAGTAAAGAAAGAGGGCAAA+AGG + tig0022126:35924-35943 None:intergenic 40.0%
GTGGCTTTCTACAATCACAT+TGG + tig0022126:36356-36375 None:intergenic 40.0%
! TAGAAAGCCACAATTGGCTT+GGG - tig0022126:36365-36384 Msa1397080:intron 40.0%
!!! TAAGTTTTGGAACAGAGAGC+AGG + tig0022126:36549-36568 None:intergenic 40.0%
! CAAACTTCAGCTCTGATACT+AGG + tig0022126:36858-36877 None:intergenic 40.0%
CTAGTATCAGAGCTGAAGTT+TGG - tig0022126:36856-36875 Msa1397080:CDS 40.0%
AGAATGCTTACACTCCAAGT+AGG + tig0022126:36887-36906 None:intergenic 40.0%
!! ACAAACACGTCTTCTAAAGC+CGG - tig0022126:36970-36989 Msa1397080:intron 40.0%
GCTCAATGTATATGCAATGC+CGG + tig0022126:36992-37011 None:intergenic 40.0%
CAACTGCTAAAATCCAACAG+TGG - tig0022126:37516-37535 Msa1397080:intron 40.0%
GAAGTCAACTATGAAGGAGA+TGG - tig0022126:37564-37583 Msa1397080:intron 40.0%
! GGAAATGTCTGAAATACCTC+GGG + tig0022126:37801-37820 None:intergenic 40.0%
CAGACATTTCCTTCTGATGA+TGG - tig0022126:37810-37829 Msa1397080:intron 40.0%
!! ATTTCCTTCTGATGATGGTC+TGG - tig0022126:37815-37834 Msa1397080:intron 40.0%
CAATGCCAAGACAACTTCTA+AGG - tig0022126:37845-37864 Msa1397080:intron 40.0%
TCTTCTCCCTCACAAATGAA+AGG - tig0022126:37873-37892 Msa1397080:intron 40.0%
AAGCTGTTGTTCCAGAAAGT+AGG - tig0022126:38000-38019 Msa1397080:intron 40.0%
AGCTGTTGTTCCAGAAAGTA+GGG - tig0022126:38001-38020 Msa1397080:intron 40.0%
GAAAAATTCTGCCAGCATCT+AGG + tig0022126:38070-38089 None:intergenic 40.0%
TGTTGTATCAGAAGATCACG+AGG - tig0022126:38190-38209 Msa1397080:intron 40.0%
AATTTCAGGCTTGATGAGGT+GGG - tig0022126:38254-38273 Msa1397080:intron 40.0%
TTGATGAGGTGGGTATTAGA+AGG - tig0022126:38264-38283 Msa1397080:intron 40.0%
TTAAGGATTCCCACCTGTTT+AGG - tig0022126:38318-38337 Msa1397080:intron 40.0%
!! CTTTTTCGTTTACAGGATGG+TGG - tig0022126:38370-38389 Msa1397080:intron 40.0%
TGGTGGTAGTATTGTTCAGA+AGG - tig0022126:38387-38406 Msa1397080:CDS 40.0%
GGTGGTAGTATTGTTCAGAA+GGG - tig0022126:38388-38407 Msa1397080:CDS 40.0%
AGCAATAAATCGTCTGTTGG+TGG + tig0022126:38524-38543 None:intergenic 40.0%
CAGCATGGATGATATCCTTA+CGG - tig0022126:38601-38620 Msa1397080:five_prime_UTR 40.0%
GATATCCTTACGGAATGCAA+TGG - tig0022126:38611-38630 Msa1397080:five_prime_UTR 40.0%
!! GCAGTGCTTATTTTCAGACA+CGG + tig0022126:38812-38831 None:intergenic 40.0%
! AAAATAAGCACTGCAAAGCC+TGG - tig0022126:38818-38837 Msa1397080:five_prime_UTR 40.0%
! AAATAAGCACTGCAAAGCCT+GGG - tig0022126:38819-38838 Msa1397080:five_prime_UTR 40.0%
CGATAGTGTTGTGGCTTAAA+AGG - tig0022126:38904-38923 Msa1397080:five_prime_UTR 40.0%
! CTCTGATTTGAGACCCATTT+CGG - tig0022126:39023-39042 Msa1397080:five_prime_UTR 40.0%
! AGTACACCTTTTCCTAAAGC+AGG - tig0022126:39050-39069 Msa1397080:five_prime_UTR 40.0%
! TCGGCATCTTTAAGAGTCAA+AGG + tig0022126:39169-39188 None:intergenic 40.0%
GACTGAGTAAGCATATCAAG+TGG - tig0022126:39187-39206 Msa1397080:five_prime_UTR 40.0%
! TTGTTGGGGAGAGGTTGTTT+TGG + tig0022126:34301-34320 None:intergenic 45.0%
! CCTATATGTTTGTTGGGGAG+AGG + tig0022126:34310-34329 None:intergenic 45.0%
CCTCTCCCCAACAAACATAT+AGG - tig0022126:34307-34326 Msa1397080:three_prime_UTR 45.0%
GAAACGAAGAACAATCGTGG+AGG - tig0022126:34593-34612 Msa1397080:three_prime_UTR 45.0%
AACGAAGAACAATCGTGGAG+GGG - tig0022126:34595-34614 Msa1397080:three_prime_UTR 45.0%
GTTAGTGGAAAGGAACATGG+AGG + tig0022126:34645-34664 None:intergenic 45.0%
! TGGCGTTCAAGTTAGTGGAA+AGG + tig0022126:34655-34674 None:intergenic 45.0%
GAAGAATGGAGTTTGGCTGT+TGG + tig0022126:34675-34694 None:intergenic 45.0%
CAAACTCCATTCTTCTCCGA+CGG - tig0022126:34680-34699 Msa1397080:three_prime_UTR 45.0%
CATGAAAGAGAACTTGGCAG+CGG + tig0022126:34711-34730 None:intergenic 45.0%
CAAGTTCTCTTTCATGAGCG+CGG - tig0022126:34715-34734 Msa1397080:three_prime_UTR 45.0%
ATCGTGGATCCATTTGCGTT+CGG - tig0022126:35045-35064 Msa1397080:CDS 45.0%
CTTCCTGTTCATCCTCTGAT+CGG - tig0022126:35107-35126 Msa1397080:CDS 45.0%
! GTGTGTTGTTCTGAGTGTGT+AGG - tig0022126:35298-35317 Msa1397080:CDS 45.0%
AAGGGGAAGAAGGGTTGAAA+AGG - tig0022126:35389-35408 Msa1397080:CDS 45.0%
GTAGAAAGCCACAATTGGCT+TGG - tig0022126:36364-36383 Msa1397080:intron 45.0%
!!! TTTCTTTTTCGGCGTGACCA+CGG + tig0022126:36638-36657 None:intergenic 45.0%
GTGTCCTTTCTCCTCAACAA+TGG - tig0022126:36660-36679 Msa1397080:intron 45.0%
GGAATTTCATTCCACGATCG+CGG + tig0022126:36715-36734 None:intergenic 45.0%
TTCCTGAAAAGAGTTCGCAG+CGG - tig0022126:36731-36750 Msa1397080:intron 45.0%
! GAAGTTTGGCCTTTCCTACT+TGG - tig0022126:36870-36889 Msa1397080:CDS 45.0%
GCTTACACTCCAAGTAGGAA+AGG + tig0022126:36882-36901 None:intergenic 45.0%
! TTTGGTGCATCTAGGATGCA+TGG - tig0022126:36939-36958 Msa1397080:intron 45.0%
CAACTTAAAGCTCCCACTGT+TGG + tig0022126:37532-37551 None:intergenic 45.0%
CTTGCTGCATCTTCAGAACT+AGG + tig0022126:37618-37637 None:intergenic 45.0%
ATCTCCTTCCAACAGGGAAA+CGG + tig0022126:37703-37722 None:intergenic 45.0%
AGCATCATCTCCTTCCAACA+GGG + tig0022126:37709-37728 None:intergenic 45.0%
GTCAGTGGAATCTGTATCGA+GGG + tig0022126:37760-37779 None:intergenic 45.0%
AGTCAGTGGAATCTGTATCG+AGG + tig0022126:37761-37780 None:intergenic 45.0%
! CGATACAGATTCCACTGACT+CGG - tig0022126:37761-37780 Msa1397080:intron 45.0%
AAATACCTCGGGACTTTCTG+AGG + tig0022126:37790-37809 None:intergenic 45.0%
TCTTCCAGACCATCATCAGA+AGG + tig0022126:37822-37841 None:intergenic 45.0%
TCTCCCTCACAAATGAAAGG+TGG - tig0022126:37876-37895 Msa1397080:intron 45.0%
CTCCCTCACAAATGAAAGGT+GGG - tig0022126:37877-37896 Msa1397080:intron 45.0%
GACCCACCTTTCATTTGTGA+GGG + tig0022126:37882-37901 None:intergenic 45.0%
TGACCCACCTTTCATTTGTG+AGG + tig0022126:37883-37902 None:intergenic 45.0%
TGGGTCAACACTACGAAGTA+GGG - tig0022126:37896-37915 Msa1397080:intron 45.0%
AAGACTTTGCCACATGGCAA+CGG - tig0022126:37919-37938 Msa1397080:intron 45.0%
GTATGGCATCCATTCTGCAT+TGG + tig0022126:37970-37989 None:intergenic 45.0%
! TCTGGAACAACAGCTTGAGA+GGG + tig0022126:37996-38015 None:intergenic 45.0%
!! TTCTGGAACAACAGCTTGAG+AGG + tig0022126:37997-38016 None:intergenic 45.0%
!! GCTGTTGGCTTGAAGGATTA+TGG - tig0022126:38041-38060 Msa1397080:intron 45.0%
GATTATGGTCACCTAGATGC+TGG - tig0022126:38056-38075 Msa1397080:intron 45.0%
GCACTATACGACCCTGAAAT+TGG - tig0022126:38125-38144 Msa1397080:intron 45.0%
ATAACAGATCGCTCATACCC+TGG + tig0022126:38157-38176 None:intergenic 45.0%
!! GAGGCATTCTGGTGTTTTGT+TGG - tig0022126:38209-38228 Msa1397080:intron 45.0%
AAAAGGCCAGGCAGAATTTC+AGG - tig0022126:38240-38259 Msa1397080:intron 45.0%
ATCAAGCCTGAAATTCTGCC+TGG + tig0022126:38249-38268 None:intergenic 45.0%
GCAGAATTTCAGGCTTGATG+AGG - tig0022126:38250-38269 Msa1397080:intron 45.0%
GAATTTCAGGCTTGATGAGG+TGG - tig0022126:38253-38272 Msa1397080:intron 45.0%
TTCCCACCTGTTTAGGCATT+TGG - tig0022126:38325-38344 Msa1397080:intron 45.0%
CTCCAAATGCCTAAACAGGT+GGG + tig0022126:38330-38349 None:intergenic 45.0%
TCTCCAAATGCCTAAACAGG+TGG + tig0022126:38331-38350 None:intergenic 45.0%
GCTTCTCCAAATGCCTAAAC+AGG + tig0022126:38334-38353 None:intergenic 45.0%
TTGAACAGACTCTCTGCCTT+TGG - tig0022126:38420-38439 Msa1397080:CDS 45.0%
TGAACAGACTCTCTGCCTTT+GGG - tig0022126:38421-38440 Msa1397080:CDS 45.0%
! TCTGCCTTTGGGAAGTAATG+TGG - tig0022126:38432-38451 Msa1397080:CDS 45.0%
! CTGCCTTTGGGAAGTAATGT+GGG - tig0022126:38433-38452 Msa1397080:CDS 45.0%
CAGCAATCAGAGCTGGTATA+GGG - tig0022126:38465-38484 Msa1397080:CDS 45.0%
AATCTGCCTGGAGCAGAATT+AGG - tig0022126:38489-38508 Msa1397080:CDS 45.0%
CAGCCTCAGTGTTACAAAGA+AGG - tig0022126:38555-38574 Msa1397080:five_prime_UTR 45.0%
CCATGCTGCTATACTTCTCA+AGG + tig0022126:38589-38608 None:intergenic 45.0%
! CCTTGAGAAGTATAGCAGCA+TGG - tig0022126:38586-38605 Msa1397080:five_prime_UTR 45.0%
CCAGAAGCTTCCAAACATCA+AGG + tig0022126:38649-38668 None:intergenic 45.0%
CCTTGATGTTTGGAAGCTTC+TGG - tig0022126:38646-38665 Msa1397080:five_prime_UTR 45.0%
TCTGGATGATGCCCATAACT+TGG - tig0022126:38664-38683 Msa1397080:five_prime_UTR 45.0%
AAGGGTGACCACCAAGTTAT+GGG + tig0022126:38678-38697 None:intergenic 45.0%
TACGTATCAACTGCGGTCAT+TGG + tig0022126:38730-38749 None:intergenic 45.0%
GATCTTTACTTACAGGCTGC+TGG - tig0022126:38777-38796 Msa1397080:five_prime_UTR 45.0%
!! GTGCTTATTTTCAGACACGG+AGG + tig0022126:38809-38828 None:intergenic 45.0%
AGGTGTACTCACTCCGAAAT+GGG + tig0022126:39039-39058 None:intergenic 45.0%
AAGGTGTACTCACTCCGAAA+TGG + tig0022126:39040-39059 None:intergenic 45.0%
! ACACCTTTTCCTAAAGCAGG+TGG - tig0022126:39053-39072 Msa1397080:five_prime_UTR 45.0%
! CACCTTTTCCTAAAGCAGGT+GGG - tig0022126:39054-39073 Msa1397080:five_prime_UTR 45.0%
!! TACCCACCTGCTTTAGGAAA+AGG + tig0022126:39059-39078 None:intergenic 45.0%
! TTTTCCTAAAGCAGGTGGGT+AGG - tig0022126:39058-39077 Msa1397080:five_prime_UTR 45.0%
AGAGAGAGAGAGAGAGAGAG+AGG + tig0022126:34361-34380 None:intergenic 50.0%
TGTCTCTCTCCCACTACGAA+GGG + tig0022126:34420-34439 None:intergenic 50.0%
TTGTCTCTCTCCCACTACGA+AGG + tig0022126:34421-34440 None:intergenic 50.0%
TGGAAAGGAACATGGAGGAG+AGG + tig0022126:34640-34659 None:intergenic 50.0%
! GCTGTTGGCGTTCAAGTTAG+TGG + tig0022126:34660-34679 None:intergenic 50.0%
CGTCGGAGAAGAATGGAGTT+TGG + tig0022126:34682-34701 None:intergenic 50.0%
CGCGCTCATGAAAGAGAACT+TGG + tig0022126:34717-34736 None:intergenic 50.0%
TCAGAGGATGAACAGGAAGC+TGG + tig0022126:35106-35125 None:intergenic 50.0%
TCACCGATCAGAGGATGAAC+AGG + tig0022126:35113-35132 None:intergenic 50.0%
ACACTTGCCCAAGCCAATTG+TGG + tig0022126:36375-36394 None:intergenic 50.0%
GAGGTCGTCTTAAATCACCG+TGG - tig0022126:36618-36637 Msa1397080:intron 50.0%
! AAAAGCTTGTTTGCCCCCGA+CGG - tig0022126:36683-36702 Msa1397080:intron 50.0%
CCAGAGAATCCCTTTCCAGT+GGG - tig0022126:37640-37659 Msa1397080:intron 50.0%
CAGAGAATCCCTTTCCAGTG+GGG - tig0022126:37641-37660 Msa1397080:intron 50.0%
TGATCCATCCGTTTCCCTGT+TGG - tig0022126:37692-37711 Msa1397080:intron 50.0%
GAGCATCATCTCCTTCCAAC+AGG + tig0022126:37710-37729 None:intergenic 50.0%
! TTCTGAGGAATCCGAGTCAG+TGG + tig0022126:37775-37794 None:intergenic 50.0%
GTGGGTCAACACTACGAAGT+AGG - tig0022126:37895-37914 Msa1397080:intron 50.0%
GTAGGGAAGACTTTGCCACA+TGG - tig0022126:37913-37932 Msa1397080:intron 50.0%
TGGCACGTACTGCATCAAGT+CGG + tig0022126:37950-37969 None:intergenic 50.0%
CAGTACGTGCCAATGCAGAA+TGG - tig0022126:37958-37977 Msa1397080:intron 50.0%
ACAGCTTGAGAGGGAGAGTA+TGG + tig0022126:37987-38006 None:intergenic 50.0%
GATCGATGTGCCCTACTTTC+TGG + tig0022126:38014-38033 None:intergenic 50.0%
CCTGGCAGTAGCCAATTTCA+GGG + tig0022126:38139-38158 None:intergenic 50.0%
CCTGAAATTGGCTACTGCCA+GGG - tig0022126:38137-38156 Msa1397080:intron 50.0%
! CAGAAGATCACGAGGCATTC+TGG - tig0022126:38198-38217 Msa1397080:intron 50.0%
TAGGCATTTGGAGAAGCTCC+AGG - tig0022126:38337-38356 Msa1397080:intron 50.0%
CTGCCCACATTACTTCCCAA+AGG + tig0022126:38439-38458 None:intergenic 50.0%
GATCAAGCAGCAATCAGAGC+TGG - tig0022126:38458-38477 Msa1397080:CDS 50.0%
GCAGCAATCAGAGCTGGTAT+AGG - tig0022126:38464-38483 Msa1397080:CDS 50.0%
CTGGTATAGGGAAATCTGCC+TGG - tig0022126:38477-38496 Msa1397080:CDS 50.0%
CCATGCCATTGCATTCCGTA+AGG + tig0022126:38619-38638 None:intergenic 50.0%
CCTTACGGAATGCAATGGCA+TGG - tig0022126:38616-38635 Msa1397080:five_prime_UTR 50.0%
TGGCAGGACACCTTGATGTT+TGG - tig0022126:38636-38655 Msa1397080:five_prime_UTR 50.0%
GGATGATGCCCATAACTTGG+TGG - tig0022126:38667-38686 Msa1397080:five_prime_UTR 50.0%
GAAGGGTGACCACCAAGTTA+TGG + tig0022126:38679-38698 None:intergenic 50.0%
GAAAGAGAACTTGGCAGCGG+CGG + tig0022126:34708-34727 None:intergenic 55.0%
GTTCTCTTTCATGAGCGCGG+TGG - tig0022126:34718-34737 Msa1397080:three_prime_UTR 55.0%
!! GTGAAAAGCACCGCCGTAGT+CGG + tig0022126:34752-34771 None:intergenic 55.0%
! TACGGCGGTGCTTTTCACGA+CGG - tig0022126:34754-34773 Msa1397080:three_prime_UTR 55.0%
GGATGAACAGGAAGCTGGTG+AGG + tig0022126:35101-35120 None:intergenic 55.0%
! AAAGCTTGTTTGCCCCCGAC+GGG - tig0022126:36684-36703 Msa1397080:intron 55.0%
! CTCCGCTGCGAACTCTTTTC+AGG + tig0022126:36736-36755 None:intergenic 55.0%
GCAGTTGTCGGCATTGTCTG+CGG + tig0022126:37503-37522 None:intergenic 55.0%
GCCAGAGAATCCCTTTCCAG+TGG - tig0022126:37639-37658 Msa1397080:intron 55.0%
CCCACTGGAAAGGGATTCTC+TGG + tig0022126:37643-37662 None:intergenic 55.0%
GCTCTGTTCCCCACTGGAAA+GGG + tig0022126:37652-37671 None:intergenic 55.0%
CCTTCCAACAGGGAAACGGA+TGG + tig0022126:37699-37718 None:intergenic 55.0%
CCATCCGTTTCCCTGTTGGA+AGG - tig0022126:37696-37715 Msa1397080:intron 55.0%
GGAATCTGTATCGAGGGCAG+AGG + tig0022126:37754-37773 None:intergenic 55.0%
GGATTCCTCAGAAAGTCCCG+AGG - tig0022126:37782-37801 Msa1397080:intron 55.0%
TCGGATGATCCGTTGCCATG+TGG + tig0022126:37931-37950 None:intergenic 55.0%
TAGGGCACATCGATCTGCTG+AGG - tig0022126:38019-38038 Msa1397080:intron 55.0%
CATCGATCTGCTGAGGCTGT+TGG - tig0022126:38026-38045 Msa1397080:intron 55.0%
!! TGCTGAGGCTGTTGGCTTGA+AGG - tig0022126:38034-38053 Msa1397080:intron 55.0%
CCCTGAAATTGGCTACTGCC+AGG - tig0022126:38136-38155 Msa1397080:intron 55.0%
CCCTGGCAGTAGCCAATTTC+AGG + tig0022126:38140-38159 None:intergenic 55.0%
CGAAAAAGCAATCCTCGGCC+TGG + tig0022126:38358-38377 None:intergenic 55.0%
ACGCTGCCTAATTCTGCTCC+AGG + tig0022126:38498-38517 None:intergenic 55.0%
ACGGAATGCAATGGCATGGC+AGG - tig0022126:38620-38639 Msa1397080:five_prime_UTR 55.0%
TGCACCTACCCACCTGCTTT+AGG + tig0022126:39065-39084 None:intergenic 55.0%
! GTGCTTTTCACGACGGTGGC+CGG - tig0022126:34761-34780 Msa1397080:three_prime_UTR 60.0%
CGCGTCGCCGTCTTCTTCTA+TGG - tig0022126:34791-34810 Msa1397080:CDS 60.0%
ACGATCGCGGATTCTCCCGT+CGG + tig0022126:36702-36721 None:intergenic 60.0%
GGCTCTGTTCCCCACTGGAA+AGG + tig0022126:37653-37672 None:intergenic 60.0%
ATCTGGGCTCTGTTCCCCAC+TGG + tig0022126:37658-37677 None:intergenic 60.0%
GCATCAGCGTTGCTGCTGCT+GGG + tig0022126:37732-37751 None:intergenic 60.0%
TTTGGAGAAGCTCCAGGCCG+AGG - tig0022126:38343-38362 Msa1397080:intron 60.0%
GGTGGCCACCTCTCCGACTA+CGG - tig0022126:34736-34755 Msa1397080:three_prime_UTR 65.0%
! AAGCACCGCCGTAGTCGGAG+AGG + tig0022126:34747-34766 None:intergenic 65.0%
! GGCGGTGCTTTTCACGACGG+TGG - tig0022126:34757-34776 Msa1397080:three_prime_UTR 65.0%
ATCGCGGATTCTCCCGTCGG+GGG + tig0022126:36699-36718 None:intergenic 65.0%
GATCGCGGATTCTCCCGTCG+GGG + tig0022126:36700-36719 None:intergenic 65.0%
CGATCGCGGATTCTCCCGTC+GGG + tig0022126:36701-36720 None:intergenic 65.0%
GACGGGAGAATCCGCGATCG+TGG - tig0022126:36701-36720 Msa1397080:intron 65.0%
GGCATCAGCGTTGCTGCTGC+TGG + tig0022126:37733-37752 None:intergenic 65.0%
GCGGCGCCGTCGGAGAAGAA+TGG + tig0022126:34689-34708 None:intergenic 70.0%
GGCCACCTCTCCGACTACGG+CGG - tig0022126:34739-34758 Msa1397080:three_prime_UTR 70.0%
CACCGCCGTAGTCGGAGAGG+TGG + tig0022126:34744-34763 None:intergenic 70.0%
GACGGCGACGCGAGCGATGC+CGG + tig0022126:34783-34802 None:intergenic 75.0%
! CTTGGCAGCGGCGGCGCCGT+CGG + tig0022126:34699-34718 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0022126 gene 34284 39231 34284 ID=Msa1397080;Name=Msa1397080
tig0022126 mRNA 34284 39231 34284 ID=Msa1397080-mRNA-1;Parent=Msa1397080;Name=Msa1397080-mRNA-1;_AED=0.04;_eAED=0.04;_QI=659|1|1|1|0.8|0.66|6|498|551
tig0022126 exon 34284 36033 34284 ID=Msa1397080-mRNA-1:exon:15859;Parent=Msa1397080-mRNA-1
tig0022126 exon 36173 36226 36173 ID=Msa1397080-mRNA-1:exon:15858;Parent=Msa1397080-mRNA-1
tig0022126 exon 36620 36669 36620 ID=Msa1397080-mRNA-1:exon:15857;Parent=Msa1397080-mRNA-1
tig0022126 exon 36761 36896 36761 ID=Msa1397080-mRNA-1:exon:15856;Parent=Msa1397080-mRNA-1
tig0022126 exon 38387 39132 38387 ID=Msa1397080-mRNA-1:exon:15855;Parent=Msa1397080-mRNA-1
tig0022126 exon 39155 39231 39155 ID=Msa1397080-mRNA-1:exon:15854;Parent=Msa1397080-mRNA-1
tig0022126 five_prime_UTR 39155 39231 39155 ID=Msa1397080-mRNA-1:five_prime_utr;Parent=Msa1397080-mRNA-1
tig0022126 five_prime_UTR 38551 39132 38551 ID=Msa1397080-mRNA-1:five_prime_utr;Parent=Msa1397080-mRNA-1
tig0022126 CDS 38387 38550 38387 ID=Msa1397080-mRNA-1:cds;Parent=Msa1397080-mRNA-1
tig0022126 CDS 36761 36896 36761 ID=Msa1397080-mRNA-1:cds;Parent=Msa1397080-mRNA-1
tig0022126 CDS 36620 36669 36620 ID=Msa1397080-mRNA-1:cds;Parent=Msa1397080-mRNA-1
tig0022126 CDS 36173 36226 36173 ID=Msa1397080-mRNA-1:cds;Parent=Msa1397080-mRNA-1
tig0022126 CDS 34782 36033 34782 ID=Msa1397080-mRNA-1:cds;Parent=Msa1397080-mRNA-1
tig0022126 three_prime_UTR 34284 34781 34284 ID=Msa1397080-mRNA-1:three_prime_utr;Parent=Msa1397080-mRNA-1
Gene Sequence

>Msa1397080

ATGAATCCTCTTAGAAGAAGTAACAATTCATCTTCATCATCTTCAAATAATTCATCTCCTTCTTCATCATCATCGAATTCATCGTGGATCCATTTGCGTTCGGTTTTATTCGTTGTTACTTCTTCTTCTTCTTCCTCACCAGCTTCCTGTTCATCCTCTGATCGAGGTCGTCTTAAATCACCGTGGTCACGCCGAAAAAGAAAACGTGTCCTTTCTCCTCAACAATGGAAAAGCTTGTTTGCCCCCGACGGGAGAATCCGCGATCGTGGAATGAAATTCCTGAAAAGAGTTCGCAGCGGAGGTGTTGATCCTAGTATCAGAGCTGAAGTTTGGCCTTTCCTACTTGGAGTATATGATTTAGATACTACCAAACAAGAAAGAGATGTTATACGAACTCAAAATAGAAAGAAGTATGAGAAACTCCGCAGACAATGCCGACAACTGCTAAAATCCAACAGTGGGAGCTTTAAGTTGATTGACATAGGTGAAGTCAACTATGAAGGAGATGGTGTGAGTTTTATTCAAGATTCTGGTTCTCCTAGTTCTGAAGATGCAGCAAGTGCCAGAGAATCCCTTTCCAGTGGGGAACAGAGCCCAGATTTTGAATATTCAGATGATCCATCCGTTTCCCTGTTGGAAGGAGATGATGCTCCCAGCAGCAGCAACGCTGATGCCTCTGCCCTCGATACAGATTCCACTGACTCGGATTCCTCAGAAAGTCCCGAGGTATTTCAGACATTTCCTTCTGATGATGGTCTGGAAGAGAACAATGCCAAGACAACTTCTAAGGATAGTTCTTCTCCCTCACAAATGAAAGGTGGGTCAACACTACGAAGTAGGGAAGACTTTGCCACATGGCAACGGATCATCCGACTTGATGCAGTACGTGCCAATGCAGAATGGATGCCATACTCTCCCTCTCAAGCTGTTGTTCCAGAAAGTAGGGCACATCGATCTGCTGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGATGCTGGCAGAATTTTTCATGCTGCTAGATTGGTTGCTATTCTTGAAGCATATGCACTATACGACCCTGAAATTGGCTACTGCCAGGGTATGAGCGATCTGTTATCTCCTATAATTAGTGTTGTATCAGAAGATCACGAGGCATTCTGGTGTTTTGTTGGATTTATGAAAAAGGCCAGGCAGAATTTCAGGCTTGATGAGGTGGGTATTAGAAGGCAACTTGATATAGTTGCAAAAATAATCAAGTTTAAGGATTCCCACCTGTTTAGGCATTTGGAGAAGCTCCAGGCCGAGGATTGCTTTTTCGTTTACAGGATGGTGGTAGTATTGTTCAGAAGGGAGTTGACATTTGAACAGACTCTCTGCCTTTGGGAAGTAATGTGGGCAGATCAAGCAGCAATCAGAGCTGGTATAGGGAAATCTGCCTGGAGCAGAATTAGGCAGCGTGCTCCACCAACAGACGATTTATTGCTTTTTGCAATAGCAGCCTCAGTGTTACAAAGAAGGAAATTGATCCTTGAGAAGTATAGCAGCATGGATGATATCCTTACGGAATGCAATGGCATGGCAGGACACCTTGATGTTTGGAAGCTTCTGGATGATGCCCATAACTTGGTGGTCACCCTTCATGATAAAATGAAGATAGAAGCATCATTCCAATGA
Protein sequence

>Msa1397080

MNPLRRSNNSSSSSSNNSSPSSSSSNSSWIHLRSVLFVVTSSSSSSPASCSSSDRGRLKSPWSRRKRKRVLSPQQWKSLFAPDGRIRDRGMKFLKRVRSGGVDPSIRAEVWPFLLGVYDLDTTKQERDVIRTQNRKKYEKLRRQCRQLLKSNSGSFKLIDIGEVNYEGDGVSFIQDSGSPSSEDAASARESLSSGEQSPDFEYSDDPSVSLLEGDDAPSSSNADASALDTDSTDSDSSESPEVFQTFPSDDGLEENNAKTTSKDSSSPSQMKGGSTLRSREDFATWQRIIRLDAVRANAEWMPYSPSQAVVPESRAHRSAEAVGLKDYGHLDAGRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIISVVSEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDIVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLFAIAASVLQRRKLILEKYSSMDDILTECNGMAGHLDVWKLLDDAHNLVVTLHDKMKIEASFQ*