AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0485210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0485210 MtrunA17_Chr4g0063561 95.226 398 19 0 1 398 1 398 0.0 782
Msa0485210 MtrunA17_Chr3g0137941 66.842 380 107 7 26 399 32 398 1.96e-173 489
Msa0485210 MtrunA17_Chr1g0149111 77.305 282 62 2 115 395 131 411 1.58e-155 445
Msa0485210 MtrunA17_Chr4g0000261 38.908 293 161 3 120 395 63 354 1.43e-68 221
Msa0485210 MtrunA17_Chr8g0385571 37.993 279 167 4 121 394 225 502 7.56e-53 183
Msa0485210 MtrunA17_Chr3g0131501 36.201 279 172 4 121 394 203 480 1.10e-49 174
Msa0485210 MtrunA17_Chr4g0006851 34.420 276 159 6 134 399 100 363 3.49e-48 168
Msa0485210 MtrunA17_Chr4g0006851 29.231 195 128 4 122 311 188 377 8.56e-16 78.6
Msa0485210 MtrunA17_Chr7g0242311 34.307 274 162 7 134 399 98 361 3.72e-48 168
Msa0485210 MtrunA17_Chr7g0242311 28.161 174 120 2 122 295 186 354 1.84e-17 83.2
Msa0485210 MtrunA17_Chr7g0252401 35.816 282 170 5 119 394 203 479 3.05e-47 168
Msa0485210 MtrunA17_Chr5g0396801 32.343 303 176 6 121 394 36 338 5.17e-47 164
Msa0485210 MtrunA17_Chr5g0396801 28.241 216 139 5 199 398 13 228 3.20e-16 79.3
Msa0485210 MtrunA17_Chr5g0396801 26.000 200 121 7 120 294 138 335 2.15e-13 70.9
Msa0485210 MtrunA17_Chr8g0347451 32.680 306 173 8 121 394 49 353 3.03e-46 162
Msa0485210 MtrunA17_Chr8g0347451 29.592 196 126 4 214 398 47 241 7.69e-18 84.3
Msa0485210 MtrunA17_Chr7g0240341 33.443 305 179 8 110 394 14 314 1.58e-45 159
Msa0485210 MtrunA17_Chr7g0240341 25.510 196 134 4 108 294 119 311 1.07e-14 74.3
Msa0485210 MtrunA17_Chr8g0382201 34.694 294 168 5 121 394 193 482 1.57e-41 152
Msa0485210 MtrunA17_Chr8g0382201 32.044 181 101 5 139 298 304 483 1.93e-15 77.8
Msa0485210 MtrunA17_Chr3g0135861 31.193 327 186 9 99 394 11 329 5.87e-41 148
Msa0485210 MtrunA17_Chr3g0135861 27.500 200 126 2 219 399 36 235 4.52e-17 81.6
Msa0485210 MtrunA17_Chr3g0115801 34.899 298 170 5 117 394 110 403 6.15e-41 149
Msa0485210 MtrunA17_Chr3g0115801 27.778 180 127 2 220 399 118 294 5.06e-14 73.2
Msa0485210 MtrunA17_Chr3g0115801 30.693 202 116 6 119 298 205 404 8.29e-11 63.2
Msa0485210 MtrunA17_Chr2g0296061 32.039 309 170 8 125 394 17 324 4.93e-40 145
Msa0485210 MtrunA17_Chr2g0296061 29.592 196 118 4 217 393 14 208 2.50e-18 85.5
Msa0485210 MtrunA17_Chr2g0296061 26.943 193 113 5 124 291 129 318 2.87e-14 73.2
Msa0485210 MtrunA17_Chr4g0067231 29.904 311 176 6 125 394 16 325 1.28e-38 141
Msa0485210 MtrunA17_Chr4g0067231 27.317 205 127 3 217 400 13 216 3.26e-18 85.1
Msa0485210 MtrunA17_Chr4g0067231 28.205 195 112 5 124 293 130 321 2.81e-15 76.3
Msa0485210 MtrunA17_Chr6g0488081 27.273 297 186 6 121 394 17 306 2.21e-35 132
Msa0485210 MtrunA17_Chr6g0488081 29.353 201 127 4 212 397 12 212 5.30e-19 87.0
Msa0485210 MtrunA17_Chr5g0436041 32.095 296 181 7 119 396 30 323 6.04e-35 131
Msa0485210 MtrunA17_Chr5g0436041 28.111 217 135 6 198 400 19 228 5.48e-12 66.6
Msa0485210 MtrunA17_Chr7g0269701 30.903 288 182 7 125 397 24 309 6.55e-32 123
Msa0485210 MtrunA17_Chr7g0269701 28.571 189 125 4 220 399 24 211 1.72e-11 64.7
Msa0485210 MtrunA17_Chr8g0372531 30.142 282 165 10 139 394 30 305 1.03e-29 117
Msa0485210 MtrunA17_Chr8g0372531 28.488 172 113 4 233 396 29 198 1.40e-13 71.2
Msa0485210 MtrunA17_Chr8g0372531 27.500 200 119 9 123 300 113 308 3.39e-13 70.1
Msa0485210 MtrunA17_Chr1g0195101 30.534 262 162 7 142 395 55 304 2.60e-26 107
Msa0485210 MtrunA17_Chr1g0201361 28.000 275 180 5 124 398 52 308 4.25e-26 107
Msa0485210 MtrunA17_Chr8g0386871 29.963 267 179 5 124 388 321 581 1.28e-25 108
Msa0485210 MtrunA17_Chr8g0386871 25.668 187 123 4 119 297 409 587 2.57e-13 71.6
Msa0485210 MtrunA17_Chr8g0386871 26.540 211 134 5 199 394 287 491 3.18e-12 68.2
Msa0485210 MtrunA17_Chr5g0423111 32.759 290 164 9 135 400 33 315 5.51e-25 104
Msa0485210 MtrunA17_Chr5g0431531 27.178 287 195 7 123 400 39 320 1.33e-23 100
Msa0485210 MtrunA17_Chr6g0488341 25.105 239 160 5 162 394 6 231 1.45e-22 95.5
Msa0485210 MtrunA17_Chr6g0463351 28.253 269 177 7 139 398 83 344 4.20e-22 96.7
Msa0485210 MtrunA17_Chr6g0463351 29.949 197 121 4 124 306 161 354 9.41e-16 78.2
Msa0485210 MtrunA17_Chr8g0366791 25.424 295 195 6 121 394 7 297 1.36e-21 94.4
Msa0485210 MtrunA17_Chr8g0383321 27.076 277 182 6 123 398 52 309 1.39e-21 94.7
Msa0485210 MtrunA17_Chr5g0411411 26.102 295 193 6 121 394 7 297 1.59e-21 94.0
Msa0485210 MtrunA17_Chr3g0135801 26.263 297 197 8 117 394 28 321 9.82e-21 92.0
Msa0485210 MtrunA17_Chr3g0135801 29.500 200 118 5 219 399 35 230 1.73e-15 77.0
Msa0485210 MtrunA17_Chr6g0463041 25.207 242 132 4 195 394 6 240 2.69e-20 89.4
Msa0485210 MtrunA17_Chr6g0463041 27.742 155 101 3 158 306 99 248 1.13e-11 64.7
Msa0485210 MtrunA17_Chr8g0343381 24.848 330 205 9 111 399 22 349 6.54e-20 90.1
Msa0485210 MtrunA17_Chr6g0455381 25.503 298 188 10 129 399 21 311 1.24e-19 89.0
Msa0485210 MtrunA17_Chr4g0040341 25.899 278 186 6 123 382 75 350 2.23e-19 89.0
Msa0485210 MtrunA17_Chr4g0040341 25.907 193 119 6 219 391 76 264 7.67e-11 63.2
Msa0485210 MtrunA17_Chr2g0293621 28.428 299 187 10 121 396 27 321 3.63e-19 87.8
Msa0485210 MtrunA17_Chr2g0293621 27.193 228 136 9 98 295 90 317 3.49e-11 63.9
Msa0485210 MtrunA17_Chr7g0219891 25.614 285 180 9 139 398 37 314 5.23e-19 87.0
Msa0485210 MtrunA17_Chr2g0328891 25.896 251 164 6 159 395 111 353 7.15e-19 87.4
Msa0485210 MtrunA17_Chr2g0328891 28.481 158 98 4 249 395 106 259 5.63e-11 63.5
Msa0485210 MtrunA17_Chr4g0004571 23.711 291 213 4 115 398 8 296 8.08e-19 86.3
Msa0485210 MtrunA17_Chr4g0004571 27.273 198 132 4 118 306 104 298 1.31e-17 82.8
Msa0485210 MtrunA17_Chr8g0352031 24.752 303 165 6 120 382 65 344 1.94e-18 86.3
Msa0485210 MtrunA17_Chr3g0086811 25.000 320 194 7 120 400 25 337 2.28e-18 85.9
Msa0485210 MtrunA17_Chr3g0088301 26.761 284 176 8 123 382 93 368 3.37e-18 85.5
Msa0485210 MtrunA17_Chr1g0200171 25.623 281 195 8 120 399 522 789 4.40e-18 86.7
Msa0485210 MtrunA17_Chr1g0200171 27.551 196 133 4 118 309 605 795 9.19e-13 70.1
Msa0485210 MtrunA17_Chr8g0393031 23.022 278 193 6 123 382 19 293 2.73e-17 82.0
Msa0485210 MtrunA17_Chr2g0331771 28.313 166 109 3 136 291 262 427 2.05e-15 77.4
Msa0485210 MtrunA17_Chr2g0331771 22.472 356 263 6 50 397 86 436 1.26e-14 75.1
Msa0485210 MtrunA17_Chr4g0046981 23.377 308 199 8 114 394 3 300 6.50e-14 72.0
Msa0485210 MtrunA17_Chr7g0275411 26.393 341 178 14 120 400 14 341 8.65e-14 72.0
Msa0485210 MtrunA17_Chr3g0133111 22.045 313 201 10 120 394 3 310 1.23e-13 71.2
Msa0485210 MtrunA17_Chr1g0196921 23.469 196 131 5 116 295 103 295 4.79e-13 69.3
Msa0485210 MtrunA17_Chr1g0196921 23.204 181 119 4 232 398 28 202 1.96e-11 64.7
Msa0485210 MtrunA17_Chr1g0196921 20.962 291 204 9 122 393 13 296 6.59e-11 62.8
Msa0485210 MtrunA17_Chr4g0028531 22.337 291 188 8 118 384 17 293 8.28e-13 68.9
Msa0485210 MtrunA17_Chr6g0461981 22.744 277 180 8 48 315 7 258 1.01e-12 68.9
Msa0485210 MtrunA17_Chr6g0461981 25.946 185 131 3 216 397 61 242 1.53e-11 65.5
Msa0485210 MtrunA17_Chr3g0126331 24.528 265 168 7 157 394 128 387 2.41e-12 68.2
Msa0485210 MtrunA17_Chr7g0251981 25.000 180 128 3 126 300 85 262 2.13e-11 65.1
Msa0485210 MtrunA17_Chr3g0136041 22.442 303 191 7 139 399 48 348 2.89e-11 64.3
Msa0485210 MtrunA17_Chr5g0407451 23.889 180 133 2 218 397 21 196 4.37e-11 63.5
Msa0485210 MtrunA17_Chr8g0367641 23.554 242 170 5 164 394 75 312 5.11e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0485210 AT4G32400.1 71.233 292 82 2 109 399 100 390 5.25e-153 438
Msa0485210 AT3G20240.1 41.781 292 152 4 121 395 50 340 1.39e-70 226
Msa0485210 AT5G61810.2 36.429 280 158 6 123 394 65 332 9.13e-47 163
Msa0485210 AT5G61810.2 28.814 177 122 3 122 295 155 330 1.13e-18 86.7
Msa0485210 AT5G51050.1 37.410 278 163 6 123 394 223 495 1.33e-46 167
Msa0485210 AT5G51050.1 28.889 180 121 4 122 296 317 494 4.20e-18 86.7
Msa0485210 AT3G51870.1 32.000 275 169 6 134 400 102 366 7.96e-46 162
Msa0485210 AT3G51870.1 27.841 176 118 4 122 295 190 358 3.12e-14 73.9
Msa0485210 AT4G01100.1 33.660 306 170 9 121 394 40 344 8.53e-46 161
Msa0485210 AT4G01100.1 30.928 194 122 4 214 396 38 230 1.82e-17 83.6
Msa0485210 AT4G01100.1 25.000 200 125 3 120 294 142 341 1.08e-14 75.1
Msa0485210 AT5G61810.1 36.429 280 158 6 123 394 208 475 2.35e-45 163
Msa0485210 AT5G61810.1 28.814 177 122 3 122 295 298 473 3.59e-18 86.7
Msa0485210 AT4G01100.2 32.288 319 171 8 121 394 40 358 3.92e-45 160
Msa0485210 AT4G01100.2 29.469 207 122 4 214 396 38 244 5.24e-17 82.4
Msa0485210 AT4G01100.2 25.000 200 125 3 120 294 156 355 8.66e-15 75.5
Msa0485210 AT3G53940.1 34.014 294 174 7 119 394 69 360 4.55e-44 157
Msa0485210 AT3G53940.1 31.000 200 114 6 219 400 74 267 1.11e-17 84.3
Msa0485210 AT5G07320.1 37.175 269 149 7 132 392 218 474 5.05e-44 159
Msa0485210 AT5G07320.1 29.518 166 114 2 228 393 219 381 6.03e-14 73.6
Msa0485210 AT2G37890.1 32.432 296 176 7 119 394 41 332 5.81e-44 156
Msa0485210 AT2G37890.1 28.571 217 135 6 198 400 29 239 5.56e-18 84.7
Msa0485210 AT5G01500.1 33.455 275 165 6 134 400 130 394 2.82e-43 156
Msa0485210 AT5G01500.1 28.977 176 120 2 120 295 216 386 4.68e-14 73.9
Msa0485210 AT4G01100.3 32.653 294 167 8 132 394 1 294 2.57e-42 150
Msa0485210 AT4G01100.3 29.885 174 110 4 234 396 8 180 2.24e-15 76.6
Msa0485210 AT4G01100.3 24.638 207 131 3 120 301 92 298 8.41e-15 75.1
Msa0485210 AT5G64970.1 35.690 297 161 7 121 394 133 422 2.42e-41 151
Msa0485210 AT5G64970.1 30.387 181 104 5 139 298 244 423 4.97e-14 73.9
Msa0485210 AT5G64970.2 34.948 289 164 6 126 394 14 298 2.83e-40 145
Msa0485210 AT5G64970.2 30.387 181 104 5 139 298 120 299 1.78e-14 73.9
Msa0485210 AT5G64970.2 29.143 175 120 3 225 399 19 189 1.78e-11 65.1
Msa0485210 AT3G55640.1 33.000 300 181 7 119 400 34 331 1.59e-39 144
Msa0485210 AT3G55640.1 27.411 197 133 5 110 298 132 326 5.42e-15 75.9
Msa0485210 AT3G55640.4 33.000 300 181 7 119 400 34 331 1.59e-39 144
Msa0485210 AT3G55640.4 27.411 197 133 5 110 298 132 326 5.42e-15 75.9
Msa0485210 AT4G26180.1 29.795 292 180 6 121 391 19 306 5.66e-38 140
Msa0485210 AT4G26180.1 31.122 196 120 4 212 392 14 209 2.58e-18 85.9
Msa0485210 AT1G14560.1 30.928 291 163 8 134 394 38 320 1.10e-37 139
Msa0485210 AT1G14560.1 30.055 183 112 2 234 400 43 225 1.13e-19 89.7
Msa0485210 AT3G21390.1 30.247 324 164 7 125 397 21 333 1.71e-36 136
Msa0485210 AT3G21390.1 29.082 196 109 6 124 291 131 324 1.78e-12 68.6
Msa0485210 AT3G21390.2 30.247 324 164 7 125 397 43 355 3.66e-36 135
Msa0485210 AT3G21390.2 29.082 196 109 6 124 291 153 346 2.13e-12 68.2
Msa0485210 AT1G78180.1 31.879 298 178 6 121 398 126 418 3.89e-36 137
Msa0485210 AT5G64970.3 35.125 279 151 7 121 376 133 404 7.58e-36 136
Msa0485210 AT5G64970.3 30.233 172 117 2 220 391 137 305 4.65e-13 70.5
Msa0485210 AT5G48970.1 29.808 312 176 7 125 394 24 334 9.97e-36 134
Msa0485210 AT5G48970.1 29.442 197 117 5 220 396 24 218 4.27e-18 85.1
Msa0485210 AT5G48970.1 26.531 196 115 5 123 291 135 328 4.92e-14 73.2
Msa0485210 AT4G26180.2 29.242 277 171 6 121 376 19 291 1.70e-33 127
Msa0485210 AT4G26180.2 31.122 196 120 4 212 392 14 209 1.81e-18 85.5
Msa0485210 AT1G14560.2 30.403 273 152 8 134 376 38 302 6.01e-32 123
Msa0485210 AT1G14560.2 30.055 183 112 2 234 400 43 225 1.22e-19 89.4
Msa0485210 AT5G66380.1 32.095 296 174 10 125 397 12 303 8.08e-32 123
Msa0485210 AT5G66380.1 30.366 191 124 4 217 399 9 198 6.24e-19 87.0
Msa0485210 AT5G48970.2 30.888 259 152 6 162 394 6 263 8.02e-31 119
Msa0485210 AT5G48970.2 26.531 196 115 5 123 291 64 257 1.59e-14 73.6
Msa0485210 AT5G48970.2 29.054 148 99 3 253 396 2 147 5.85e-14 72.0
Msa0485210 AT2G30160.1 27.972 286 190 6 123 396 42 323 1.38e-27 112
Msa0485210 AT1G14560.3 33.333 201 105 5 219 394 26 222 2.07e-27 108
Msa0485210 AT1G14560.3 23.188 207 128 4 115 294 17 219 1.11e-11 64.7
Msa0485210 AT1G14560.3 32.407 108 59 1 307 400 20 127 6.41e-11 62.4
Msa0485210 AT1G07030.1 28.975 283 188 6 123 396 40 318 1.17e-26 109
Msa0485210 AT1G34065.2 28.058 278 182 5 123 400 75 334 1.52e-26 109
Msa0485210 AT1G34065.2 28.221 163 111 3 119 279 152 310 8.41e-15 75.5
Msa0485210 AT1G34065.2 29.545 176 98 4 217 388 74 227 1.13e-12 68.9
Msa0485210 AT1G34065.1 28.058 278 182 5 123 400 82 341 2.25e-26 108
Msa0485210 AT1G34065.1 28.221 163 111 3 119 279 159 317 1.15e-14 75.1
Msa0485210 AT1G34065.1 29.545 176 98 4 217 388 81 234 1.23e-12 68.9
Msa0485210 AT4G39460.2 28.417 278 181 5 123 400 58 317 1.37e-25 106
Msa0485210 AT4G39460.2 28.221 163 111 3 119 279 135 293 1.02e-12 68.9
Msa0485210 AT4G39460.1 28.417 278 181 5 123 400 58 317 1.37e-25 106
Msa0485210 AT4G39460.1 28.221 163 111 3 119 279 135 293 1.02e-12 68.9
Msa0485210 AT4G39460.3 28.417 278 181 5 123 400 58 317 1.37e-25 106
Msa0485210 AT4G39460.3 28.221 163 111 3 119 279 135 293 1.02e-12 68.9
Msa0485210 AT5G46800.2 27.333 300 190 7 119 394 4 299 2.88e-25 104
Msa0485210 AT5G46800.3 27.333 300 190 7 119 394 4 299 2.88e-25 104
Msa0485210 AT5G46800.1 27.333 300 190 7 119 394 4 299 2.88e-25 104
Msa0485210 AT1G25380.1 32.384 281 162 10 135 394 33 306 3.07e-25 105
Msa0485210 AT1G25380.1 32.000 175 102 6 234 396 37 206 9.65e-12 66.2
Msa0485210 AT1G25380.2 32.384 281 162 10 135 394 33 306 3.07e-25 105
Msa0485210 AT1G25380.2 32.000 175 102 6 234 396 37 206 9.65e-12 66.2
Msa0485210 AT4G11440.1 29.102 323 209 8 86 394 287 603 1.11e-24 106
Msa0485210 AT4G11440.1 31.461 178 117 2 218 395 330 502 3.65e-16 80.9
Msa0485210 AT4G11440.2 29.102 323 209 8 86 394 287 603 1.11e-24 106
Msa0485210 AT4G11440.2 31.461 178 117 2 218 395 330 502 3.65e-16 80.9
Msa0485210 AT2G47490.1 30.634 284 167 9 135 397 29 303 3.87e-24 102
Msa0485210 AT3G53940.2 31.674 221 134 6 119 324 69 287 3.99e-24 101
Msa0485210 AT3G53940.2 31.000 200 114 6 219 400 74 267 5.43e-18 84.0
Msa0485210 AT5G26200.1 25.155 322 203 11 110 399 27 342 3.28e-21 94.4
Msa0485210 AT2G35800.1 27.046 281 192 8 120 399 542 810 1.02e-20 95.1
Msa0485210 AT3G55640.2 30.769 221 136 6 119 324 34 252 1.28e-20 90.9
Msa0485210 AT3G55640.2 29.756 205 126 6 203 391 21 223 4.83e-18 83.6
Msa0485210 AT3G55640.3 30.769 221 136 6 119 324 34 252 1.28e-20 90.9
Msa0485210 AT3G55640.3 29.756 205 126 6 203 391 21 223 4.83e-18 83.6
Msa0485210 AT5G56450.1 26.510 298 191 9 121 394 32 325 1.71e-20 92.0
Msa0485210 AT5G56450.1 27.778 198 124 3 219 397 35 232 1.24e-14 74.7
Msa0485210 AT1G79900.1 28.718 195 134 3 118 311 104 294 5.66e-20 89.7
Msa0485210 AT1G79900.1 25.000 260 183 7 139 394 32 283 5.31e-15 75.5
Msa0485210 AT2G33820.1 25.333 300 189 10 121 394 16 306 9.10e-20 89.7
Msa0485210 AT2G26360.1 26.510 298 201 10 102 395 94 377 7.03e-19 88.2
Msa0485210 AT2G26360.1 29.121 182 122 4 124 303 206 382 2.84e-13 71.2
Msa0485210 AT4G28390.1 24.830 294 187 7 114 382 74 358 6.39e-18 85.1
Msa0485210 AT4G28390.1 27.461 193 116 6 219 391 84 272 1.44e-11 65.9
Msa0485210 AT4G28390.2 24.830 294 187 7 114 382 74 358 6.39e-18 85.1
Msa0485210 AT4G28390.2 27.461 193 116 6 219 391 84 272 1.44e-11 65.9
Msa0485210 AT1G72820.1 27.007 274 163 7 163 399 70 343 6.39e-18 84.7
Msa0485210 AT1G72820.1 27.273 209 117 5 126 299 132 340 9.56e-12 66.2
Msa0485210 AT1G72820.2 27.007 274 163 7 163 399 70 343 6.39e-18 84.7
Msa0485210 AT1G72820.2 27.273 209 117 5 126 299 132 340 9.56e-12 66.2
Msa0485210 AT5G42130.1 26.394 269 183 7 139 398 134 396 1.64e-17 84.3
Msa0485210 AT5G15640.1 26.259 278 179 7 139 393 44 318 2.18e-17 82.8
Msa0485210 AT5G15640.2 26.786 280 175 8 139 393 37 311 2.50e-17 82.8
Msa0485210 AT5G15640.2 27.225 191 117 6 124 295 123 310 7.92e-11 63.2
Msa0485210 AT5G17400.1 25.600 250 165 5 143 382 51 289 2.61e-17 82.4
Msa0485210 AT2G33820.3 24.675 308 189 11 121 394 16 314 3.19e-17 82.4
Msa0485210 AT3G08580.2 25.087 287 178 7 123 382 84 360 5.55e-17 82.4
Msa0485210 AT3G08580.1 25.087 287 178 7 123 382 84 360 5.55e-17 82.4
Msa0485210 AT5G13490.1 24.611 386 234 13 26 382 7 364 8.66e-17 81.6
Msa0485210 AT5G13490.1 23.944 213 137 5 207 398 77 285 4.63e-11 64.3
Msa0485210 AT5G13490.2 24.611 386 234 13 26 382 7 364 8.66e-17 81.6
Msa0485210 AT5G13490.2 23.944 213 137 5 207 398 77 285 4.63e-11 64.3
Msa0485210 AT4G03115.2 28.729 181 115 5 223 396 40 213 1.52e-16 78.6
Msa0485210 AT4G03115.4 28.729 181 115 5 223 396 40 213 2.12e-16 78.2
Msa0485210 AT4G27940.1 28.464 267 160 10 154 394 146 407 3.27e-16 80.5
Msa0485210 AT1G74240.1 25.658 304 185 7 120 388 33 330 3.45e-16 79.7
Msa0485210 AT1G74240.1 27.027 222 116 7 117 299 124 338 7.77e-11 63.5
Msa0485210 AT4G03115.1 28.571 182 116 5 223 397 40 214 1.68e-15 77.4
Msa0485210 AT4G03115.1 25.725 276 192 6 124 393 40 308 1.72e-13 71.2
Msa0485210 AT4G03115.1 30.573 157 100 3 120 271 131 283 1.67e-12 68.2
Msa0485210 AT1G14140.1 27.670 206 131 6 104 294 95 297 2.79e-15 76.6
Msa0485210 AT1G14140.1 21.769 294 207 10 118 393 11 299 1.35e-13 71.6
Msa0485210 AT1G14140.1 25.269 186 116 6 231 398 29 209 5.37e-11 63.5
Msa0485210 AT4G03115.3 28.729 181 115 5 223 396 72 245 3.68e-15 76.6
Msa0485210 AT4G03115.3 25.725 276 192 6 124 393 72 340 1.95e-13 71.2
Msa0485210 AT4G03115.3 30.573 157 100 3 120 271 163 315 1.76e-12 68.6
Msa0485210 AT5G58970.1 24.351 308 204 9 110 397 3 301 4.10e-15 75.9
Msa0485210 AT2G33820.2 26.829 205 131 7 204 394 26 225 3.76e-14 72.0
Msa0485210 AT5G01340.1 24.324 296 177 11 118 384 12 289 1.34e-13 71.6
Msa0485210 AT5G01340.1 27.143 210 133 8 202 399 1 202 1.36e-12 68.6
Msa0485210 AT5G09470.1 24.790 238 168 3 164 394 99 332 1.45e-13 71.6
Msa0485210 AT2G17270.1 23.929 280 190 7 124 393 23 289 2.15e-13 70.9
Msa0485210 AT4G03115.5 30.573 157 100 3 120 271 60 212 4.64e-13 68.9
Msa0485210 AT4G03115.5 27.731 238 160 6 160 393 8 237 5.65e-12 65.9
Msa0485210 AT4G03115.5 28.169 142 95 3 256 397 9 143 5.74e-11 62.8
Msa0485210 AT4G03115.6 30.573 157 100 3 120 271 68 220 6.07e-13 68.9
Msa0485210 AT4G03115.6 27.731 238 160 6 160 393 16 245 4.50e-12 66.2
Msa0485210 AT4G03115.6 28.105 153 103 3 245 397 6 151 4.85e-12 66.2
Msa0485210 AT2G39970.1 23.759 282 173 8 157 397 47 327 1.10e-12 68.9
Msa0485210 AT1G74240.2 25.000 288 175 7 136 388 1 282 1.13e-12 68.9
Msa0485210 AT1G74240.2 29.932 147 88 3 163 299 149 290 8.14e-11 63.2
Msa0485210 AT5G14040.1 24.643 280 184 8 126 391 85 351 2.72e-12 68.2
Msa0485210 AT3G48850.1 27.957 186 126 5 216 397 69 250 8.42e-12 66.6
Msa0485210 AT3G48850.1 24.648 284 187 9 124 393 72 342 9.65e-12 66.2
Msa0485210 AT2G46320.1 24.234 359 205 11 93 391 1 352 9.39e-12 66.2
Msa0485210 AT3G54110.1 25.000 204 134 5 209 396 6 206 2.57e-11 64.7

Find 108 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAAAGGTAAAGATATTT+TGG 0.082054 3_4:+2777095 None:intergenic
TTAAGTAACCCTTGAAAATT+TGG 0.114001 3_4:+2776768 None:intergenic
TCTGGAATAAAGTTTGATTA+TGG 0.185277 3_4:-2776963 Msa0485210:CDS
GGGATTGTTCAGGGGAAATT+TGG 0.199928 3_4:-2776493 Msa0485210:CDS
TTGACCAATGCTTGCAAATA+AGG 0.238535 3_4:+2776920 None:intergenic
TATCCTTTGGAAATAATATA+TGG 0.259621 3_4:+2775365 None:intergenic
AACAAATGTGTCCCATATTA+TGG 0.260130 3_4:-2775149 Msa0485210:three_prime_UTR
GTAATAAGAGTTGGAGGATT+TGG 0.279699 3_4:+2776873 None:intergenic
TGAAGTGTTTCAATCCATTA+TGG 0.286065 3_4:-2776532 Msa0485210:CDS
AGCATTGGTCAAGCTGGATT+TGG 0.297922 3_4:-2776909 Msa0485210:CDS
CTGGAATAAAGTTTGATTAT+GGG 0.299137 3_4:-2776962 Msa0485210:CDS
GGAATAGCTTCAACCTTAAA+AGG 0.300929 3_4:+2777081 None:intergenic
ATGCAAGCTGGGGCACTAAA+TGG 0.319788 3_4:-2775583 Msa0485210:CDS
AATATCACCCTGGTCGAAAC+TGG 0.319871 3_4:+2775257 None:intergenic
CTTGAAAAGGAAGGGCTTGT+AGG 0.321902 3_4:-2775520 Msa0485210:CDS
GTAGGCTTATATAGAGGTTT+GGG 0.331916 3_4:-2775502 Msa0485210:CDS
GATATAGTAATATGCAATTC+TGG 0.338974 3_4:-2776981 Msa0485210:CDS
TTCAAGTTTGTAGTAATGTA+TGG 0.341864 3_4:+2777060 None:intergenic
TTCGGCTGTTCTCCAAGTTT+AGG 0.342901 3_4:+2776098 None:intergenic
CCATCCATCAACTTCCATAA+TGG 0.348155 3_4:+2776518 None:intergenic
GGAATTTGAAAAGTTGGTTC+AGG 0.349341 3_4:+2776789 None:intergenic
GGATCAATGGCTACTGAATC+TGG 0.350533 3_4:-2777011 Msa0485210:exon
AAATTTGGAATTTGAAAAGT+TGG 0.354846 3_4:+2776783 None:intergenic
CACCATCAAATGTGTCCTTA+TGG 0.362353 3_4:+2776581 None:intergenic
TGTAGGCTTATATAGAGGTT+TGG 0.364123 3_4:-2775503 Msa0485210:CDS
ATTCCTGCCTCGTCAATTGC+AGG 0.370605 3_4:-2776068 Msa0485210:CDS
AGATAATTTGTTGCAGCATA+AGG 0.371375 3_4:+2775748 None:intergenic
CAATCCATTATGGAAGTTGA+TGG 0.371533 3_4:-2776522 Msa0485210:CDS
ATGGATGGAAGGGATTGTTC+AGG 0.371579 3_4:-2776503 Msa0485210:CDS
GAATGTGATGACTCTACTAA+TGG 0.373055 3_4:-2775668 Msa0485210:CDS
AATAACTTGTGTTGGAGCTT+AGG 0.382042 3_4:-2777032 Msa0485210:five_prime_UTR
TTCTTCAGCTTCTCCTATGT+TGG 0.391141 3_4:-2777151 Msa0485210:five_prime_UTR
AGATACGGCATTATAACTTT+AGG 0.391568 3_4:-2775312 Msa0485210:three_prime_UTR
GTGAGAATTGTTAGAGAAGA+AGG 0.392967 3_4:-2775820 Msa0485210:CDS
CAAAACTCGTCTAACTGTTC+AGG 0.394317 3_4:-2775994 Msa0485210:intron
TTAACGTGAAATTCAAGATT+GGG 0.394844 3_4:-2776680 Msa0485210:CDS
TTTAACGTGAAATTCAAGAT+TGG 0.402407 3_4:-2776681 Msa0485210:CDS
TTCATCGAAGAGTTAAGTAT+TGG 0.407038 3_4:+2776825 None:intergenic
TAATGGATTGAAACACTTCA+TGG 0.409413 3_4:+2776535 None:intergenic
GACCATAAGGACACATTTGA+TGG 0.414507 3_4:-2776583 Msa0485210:CDS
CTACTAATGGGATCAGCTGC+TGG 0.434472 3_4:-2775655 Msa0485210:CDS
TTAAAATTAGTTCCAGCTGC+TGG 0.437971 3_4:-2775469 Msa0485210:CDS
GGACTGACACCGAGTTTAAT+CGG 0.441637 3_4:-2775778 Msa0485210:CDS
TTGATAAGTGGGGCAATTGC+TGG 0.443628 3_4:-2776639 Msa0485210:CDS
GCTCGTAAGCATATGCAAGC+TGG 0.444326 3_4:-2775595 Msa0485210:CDS
GATAATTTGTTGCAGCATAA+GGG 0.447081 3_4:+2775749 None:intergenic
CTCGTAAGCATATGCAAGCT+GGG 0.452266 3_4:-2775594 Msa0485210:CDS
ACTCATGAGTATACTTGAAA+AGG 0.453834 3_4:-2775533 Msa0485210:CDS
TCAAGCTGGATTTGGATTTG+TGG 0.454184 3_4:-2776901 Msa0485210:CDS
GTGTTGGAGCTTAGGATCAA+TGG 0.454628 3_4:-2777024 Msa0485210:exon
TCAATTGCAGGTGCTGTAGC+TGG 0.456383 3_4:-2776056 Msa0485210:CDS
AAGCAATTGTCTCCTAAACT+TGG 0.468583 3_4:-2776110 Msa0485210:CDS
GCAATTGACGAGGCAGGAAT+CGG 0.469551 3_4:+2776071 None:intergenic
TGGATGGAAGGGATTGTTCA+GGG 0.470480 3_4:-2776502 Msa0485210:CDS
TTTGCAAGCATTGGTCAAGC+TGG 0.476151 3_4:-2776915 Msa0485210:CDS
ATGCTTGCAAATAAGGTAGT+TGG 0.480510 3_4:+2776927 None:intergenic
AAAGTTGTTGAGGAAGGCCT+TGG 0.481700 3_4:-2776732 Msa0485210:CDS
CTCTAGAGGGTATGTGCATA+GGG 0.484856 3_4:+2776022 None:intergenic
CTTATCAATCTTCTCAGTGA+TGG 0.485399 3_4:+2776654 None:intergenic
TAAAATTAGTTCCAGCTGCT+GGG 0.487243 3_4:-2775468 Msa0485210:CDS
AGTCCTCTGTACAACTCTGC+TGG 0.488709 3_4:+2775796 None:intergenic
GGGCTTGTAGGCTTATATAG+AGG 0.496693 3_4:-2775508 Msa0485210:CDS
CACTGAGAAGATTGATAAGT+GGG 0.502171 3_4:-2776650 Msa0485210:CDS
ACTACCTTATTTGCAAGCAT+TGG 0.504048 3_4:-2776924 Msa0485210:CDS
CATTTGATGGTGGGGAGTTG+TGG 0.510279 3_4:-2776570 Msa0485210:CDS
CTCACCTCAATAGCCTTGCT+TGG 0.514450 3_4:+2776450 None:intergenic
ATGAAAGAGATCCCAGCAGC+TGG 0.516833 3_4:+2775457 None:intergenic
GAAATGAAAATAACTTGTGT+TGG 0.519225 3_4:-2777040 Msa0485210:five_prime_UTR
ATGAGTATACTTGAAAAGGA+AGG 0.523641 3_4:-2775529 Msa0485210:CDS
TGCGCCAAGCAAGGCTATTG+AGG 0.523731 3_4:-2776454 Msa0485210:intron
GCTCTAGAGGGTATGTGCAT+AGG 0.536360 3_4:+2776021 None:intergenic
GTTCCATATATTATTTCCAA+AGG 0.537455 3_4:-2775368 Msa0485210:three_prime_UTR
AATGTGATGACTCTACTAAT+GGG 0.537491 3_4:-2775667 Msa0485210:CDS
ATGGAAGTTGATGGATGGAA+GGG 0.542398 3_4:-2776513 Msa0485210:CDS
TGGCACCGTTAGAGACCATA+AGG 0.551000 3_4:-2776596 Msa0485210:CDS
TATGGAAGTTGATGGATGGA+AGG 0.556490 3_4:-2776514 Msa0485210:CDS
GAATATGCTCTGTCCAACAT+AGG 0.556882 3_4:+2777138 None:intergenic
AATGGATTGAAACACTTCAT+GGG 0.569210 3_4:+2776536 None:intergenic
CATCCGAGTTGCGCCAAGCA+AGG 0.570638 3_4:-2776463 Msa0485210:CDS
TGCTTACGAGCCACCTCGAG+TGG 0.570787 3_4:+2775607 None:intergenic
CCATTATGGAAGTTGATGGA+TGG 0.573515 3_4:-2776518 Msa0485210:CDS
GCACCTGCAATTGACGAGGC+AGG 0.574219 3_4:+2776065 None:intergenic
GCATTGAAAGTTGTTGAGGA+AGG 0.574680 3_4:-2776738 Msa0485210:CDS
GAAGGCCTTGGCATGATGAA+AGG 0.575006 3_4:-2776720 Msa0485210:CDS
TAGCCTTGCTTGGCGCAACT+CGG 0.575028 3_4:+2776460 None:intergenic
TCACTGAGAAGATTGATAAG+TGG 0.580771 3_4:-2776651 Msa0485210:CDS
TGAGTATACTTGAAAAGGAA+GGG 0.583036 3_4:-2775528 Msa0485210:CDS
TAAGGACACATTTGATGGTG+GGG 0.590066 3_4:-2776578 Msa0485210:CDS
ATAAGGACACATTTGATGGT+GGG 0.598424 3_4:-2776579 Msa0485210:CDS
TGTGTCCTTATGGTCTCTAA+CGG 0.599716 3_4:+2776591 None:intergenic
TGTGTTACGAAGCTTGCAAG+AGG 0.600032 3_4:-2775435 Msa0485210:CDS
TTAGGAAGAGAAAACAGATA+CGG 0.601860 3_4:-2775327 Msa0485210:three_prime_UTR
GGATGGAAGGGATTGTTCAG+GGG 0.604327 3_4:-2776501 Msa0485210:CDS
CATAAGGACACATTTGATGG+TGG 0.614477 3_4:-2776580 Msa0485210:CDS
TCAAGGGTTACTTAATGGTG+CGG 0.622503 3_4:-2776760 Msa0485210:CDS
TCGAAACTGGAAAATAGTCA+AGG 0.652904 3_4:+2775270 None:intergenic
GGGATTACACCGATTAAACT+CGG 0.653059 3_4:+2775769 None:intergenic
TGCGGCATTGAAAGTTGTTG+AGG 0.653533 3_4:-2776742 Msa0485210:CDS
TCGTAAGCATATGCAAGCTG+GGG 0.656654 3_4:-2775593 Msa0485210:CDS
CAGTGCAACATTCCCACTCG+AGG 0.656752 3_4:-2775620 Msa0485210:CDS
TGCAACATTCCCACTCGAGG+TGG 0.657208 3_4:-2775617 Msa0485210:CDS
GCTTACGAGCCACCTCGAGT+GGG 0.658789 3_4:+2775608 None:intergenic
AAATTAGTAGTAGATACTAG+TGG 0.670020 3_4:-2775392 Msa0485210:exon
TGCAGTGTCAAGAACAGTTG+TGG 0.671233 3_4:-2776616 Msa0485210:CDS
TACAGCACCTGCAATTGACG+AGG 0.676153 3_4:+2776061 None:intergenic
TCAATGTACTAATATCACCC+TGG 0.686628 3_4:+2775247 None:intergenic
GGTCCAGCAGAGTTGTACAG+AGG 0.692859 3_4:-2775799 Msa0485210:CDS
ACTGAGAAGATTGATAAGTG+GGG 0.720696 3_4:-2776649 Msa0485210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAATATTTTTTGTTCTT+AGG - chr3_4:2776932-2776951 Msa0485210:CDS 10.0%
!!! ATATAATATTTTTTGTTCTT+AGG - chr3_4:2776932-2776951 Msa0485210:CDS 10.0%
!!! TTAAAAGGTAAAGATATTTT+GGG + chr3_4:2775184-2775203 None:intergenic 15.0%
!!! ACTAAAAAATATGTAACTTT+TGG - chr3_4:2776072-2776091 Msa0485210:CDS 15.0%
!! ACAAAAAATATTATATCCTT+TGG + chr3_4:2776928-2776947 None:intergenic 15.0%
!!! TTTTTTTTGTACCATAATAT+GGG + chr3_4:2777142-2777161 None:intergenic 15.0%
!!! ATTTTTTTTGTACCATAATA+TGG + chr3_4:2777143-2777162 None:intergenic 15.0%
!! ATATTATGGTACAAAAAAAA+TGG - chr3_4:2777142-2777161 Msa0485210:five_prime_UTR 15.0%
!!! TTAAAAGGTAAAGATATTTT+GGG + chr3_4:2775184-2775203 None:intergenic 15.0%
!!! ACTAAAAAATATGTAACTTT+TGG - chr3_4:2776072-2776091 Msa0485210:CDS 15.0%
!! ACAAAAAATATTATATCCTT+TGG + chr3_4:2776928-2776947 None:intergenic 15.0%
!!! TTTTTTTTGTACCATAATAT+GGG + chr3_4:2777142-2777161 None:intergenic 15.0%
!!! ATTTTTTTTGTACCATAATA+TGG + chr3_4:2777143-2777162 None:intergenic 15.0%
!! ATATTATGGTACAAAAAAAA+TGG - chr3_4:2777142-2777161 Msa0485210:five_prime_UTR 15.0%
!! TGAAGAAAAAAAAAAACGAA+TGG + chr3_4:2775113-2775132 None:intergenic 20.0%
!!! CTTAAAAGGTAAAGATATTT+TGG + chr3_4:2775185-2775204 None:intergenic 20.0%
!!! CAAAATATCTTTACCTTTTA+AGG - chr3_4:2775183-2775202 Msa0485210:three_prime_UTR 20.0%
!!! AAATTTGGAATTTGAAAAGT+TGG + chr3_4:2775497-2775516 None:intergenic 20.0%
!!! TTTCAAATTCCAAATTTTCA+AGG - chr3_4:2775500-2775519 Msa0485210:CDS 20.0%
!!! TTCAAATTCCAAATTTTCAA+GGG - chr3_4:2775501-2775520 Msa0485210:CDS 20.0%
!! ATGAAAGGAAAAAATTTGAA+GGG - chr3_4:2775572-2775591 Msa0485210:CDS 20.0%
!!! TTATGTATGTTTTGTAATCT+TGG - chr3_4:2775859-2775878 Msa0485210:intron 20.0%
!!! TAATATTTTTACACTCACAA+AGG + chr3_4:2775961-2775980 None:intergenic 20.0%
!!! AACTTTTGTAACATAAACAA+TGG - chr3_4:2776350-2776369 Msa0485210:intron 20.0%
!!! TATCCTTTGGAAATAATATA+TGG + chr3_4:2776915-2776934 None:intergenic 20.0%
!!! ACATTTGTTTTCATCTATAA+AGG + chr3_4:2777117-2777136 None:intergenic 20.0%
!! TGAAGAAAAAAAAAAACGAA+TGG + chr3_4:2775113-2775132 None:intergenic 20.0%
!!! CTTAAAAGGTAAAGATATTT+TGG + chr3_4:2775185-2775204 None:intergenic 20.0%
!!! CAAAATATCTTTACCTTTTA+AGG - chr3_4:2775183-2775202 Msa0485210:three_prime_UTR 20.0%
!!! AAATTTGGAATTTGAAAAGT+TGG + chr3_4:2775497-2775516 None:intergenic 20.0%
!!! TTTCAAATTCCAAATTTTCA+AGG - chr3_4:2775500-2775519 Msa0485210:CDS 20.0%
!!! TTCAAATTCCAAATTTTCAA+GGG - chr3_4:2775501-2775520 Msa0485210:CDS 20.0%
!! ATGAAAGGAAAAAATTTGAA+GGG - chr3_4:2775572-2775591 Msa0485210:CDS 20.0%
!!! TTATGTATGTTTTGTAATCT+TGG - chr3_4:2775859-2775878 Msa0485210:intron 20.0%
!!! TAATATTTTTACACTCACAA+AGG + chr3_4:2775961-2775980 None:intergenic 20.0%
!!! AACTTTTGTAACATAAACAA+TGG - chr3_4:2776350-2776369 Msa0485210:intron 20.0%
!!! TATCCTTTGGAAATAATATA+TGG + chr3_4:2776915-2776934 None:intergenic 20.0%
!!! ACATTTGTTTTCATCTATAA+AGG + chr3_4:2777117-2777136 None:intergenic 20.0%
!! TTCAAGTTTGTAGTAATGTA+TGG + chr3_4:2775220-2775239 None:intergenic 25.0%
!! GAAATGAAAATAACTTGTGT+TGG - chr3_4:2775237-2775256 Msa0485210:three_prime_UTR 25.0%
! GATATAGTAATATGCAATTC+TGG - chr3_4:2775296-2775315 Msa0485210:three_prime_UTR 25.0%
!! TCTGGAATAAAGTTTGATTA+TGG - chr3_4:2775314-2775333 Msa0485210:three_prime_UTR 25.0%
! CTGGAATAAAGTTTGATTAT+GGG - chr3_4:2775315-2775334 Msa0485210:three_prime_UTR 25.0%
!! TCTCTTTTAGTAATAAGAGT+TGG + chr3_4:2775416-2775435 None:intergenic 25.0%
! TTAAGTAACCCTTGAAAATT+TGG + chr3_4:2775512-2775531 None:intergenic 25.0%
!!! AATTTTCAAGGGTTACTTAA+TGG - chr3_4:2775512-2775531 Msa0485210:CDS 25.0%
! GATGAAAGGAAAAAATTTGA+AGG - chr3_4:2775571-2775590 Msa0485210:CDS 25.0%
! TGAAAGGAAAAAATTTGAAG+GGG - chr3_4:2775573-2775592 Msa0485210:CDS 25.0%
! TTTAACGTGAAATTCAAGAT+TGG - chr3_4:2775596-2775615 Msa0485210:CDS 25.0%
! TTAACGTGAAATTCAAGATT+GGG - chr3_4:2775597-2775616 Msa0485210:CDS 25.0%
!! AGTTTTTGCAAGTTTATATC+AGG - chr3_4:2775919-2775938 Msa0485210:intron 25.0%
! TTTATGCTTAATTGTAGAGA+GGG - chr3_4:2776407-2776426 Msa0485210:intron 25.0%
!! CAAGAAAGCTTTTAATAAAG+AGG - chr3_4:2776579-2776598 Msa0485210:CDS 25.0%
!! CTTTTAATAAAGAGGAAGTT+GGG - chr3_4:2776587-2776606 Msa0485210:CDS 25.0%
! AAATTAGTAGTAGATACTAG+TGG - chr3_4:2776885-2776904 Msa0485210:CDS 25.0%
! GTTCCATATATTATTTCCAA+AGG - chr3_4:2776909-2776928 Msa0485210:CDS 25.0%
!! TTCAAGTTTGTAGTAATGTA+TGG + chr3_4:2775220-2775239 None:intergenic 25.0%
!! GAAATGAAAATAACTTGTGT+TGG - chr3_4:2775237-2775256 Msa0485210:three_prime_UTR 25.0%
! GATATAGTAATATGCAATTC+TGG - chr3_4:2775296-2775315 Msa0485210:three_prime_UTR 25.0%
!! TCTGGAATAAAGTTTGATTA+TGG - chr3_4:2775314-2775333 Msa0485210:three_prime_UTR 25.0%
! CTGGAATAAAGTTTGATTAT+GGG - chr3_4:2775315-2775334 Msa0485210:three_prime_UTR 25.0%
!! TCTCTTTTAGTAATAAGAGT+TGG + chr3_4:2775416-2775435 None:intergenic 25.0%
! TTAAGTAACCCTTGAAAATT+TGG + chr3_4:2775512-2775531 None:intergenic 25.0%
!!! AATTTTCAAGGGTTACTTAA+TGG - chr3_4:2775512-2775531 Msa0485210:CDS 25.0%
! GATGAAAGGAAAAAATTTGA+AGG - chr3_4:2775571-2775590 Msa0485210:CDS 25.0%
! TGAAAGGAAAAAATTTGAAG+GGG - chr3_4:2775573-2775592 Msa0485210:CDS 25.0%
! TTTAACGTGAAATTCAAGAT+TGG - chr3_4:2775596-2775615 Msa0485210:CDS 25.0%
! TTAACGTGAAATTCAAGATT+GGG - chr3_4:2775597-2775616 Msa0485210:CDS 25.0%
!! AGTTTTTGCAAGTTTATATC+AGG - chr3_4:2775919-2775938 Msa0485210:intron 25.0%
! TTTATGCTTAATTGTAGAGA+GGG - chr3_4:2776407-2776426 Msa0485210:intron 25.0%
!! CAAGAAAGCTTTTAATAAAG+AGG - chr3_4:2776579-2776598 Msa0485210:CDS 25.0%
!! CTTTTAATAAAGAGGAAGTT+GGG - chr3_4:2776587-2776606 Msa0485210:CDS 25.0%
! AAATTAGTAGTAGATACTAG+TGG - chr3_4:2776885-2776904 Msa0485210:CDS 25.0%
! GTTCCATATATTATTTCCAA+AGG - chr3_4:2776909-2776928 Msa0485210:CDS 25.0%
!!! AAGATATTTTGGGACAAATG+TGG + chr3_4:2775174-2775193 None:intergenic 30.0%
! CTTTTAGTAATAAGAGTTGG+AGG + chr3_4:2775413-2775432 None:intergenic 30.0%
TTCATCGAAGAGTTAAGTAT+TGG + chr3_4:2775455-2775474 None:intergenic 30.0%
!! AATGGATTGAAACACTTCAT+GGG + chr3_4:2775744-2775763 None:intergenic 30.0%
!! TAATGGATTGAAACACTTCA+TGG + chr3_4:2775745-2775764 None:intergenic 30.0%
! TGAAGTGTTTCAATCCATTA+TGG - chr3_4:2775745-2775764 Msa0485210:CDS 30.0%
!! TTGATAATTTTGCTCTCACA+TGG - chr3_4:2776327-2776346 Msa0485210:intron 30.0%
GTTTATGCTTAATTGTAGAG+AGG - chr3_4:2776406-2776425 Msa0485210:intron 30.0%
TTATGCTTAATTGTAGAGAG+GGG - chr3_4:2776408-2776427 Msa0485210:intron 30.0%
!! GATAATTTGTTGCAGCATAA+GGG + chr3_4:2776531-2776550 None:intergenic 30.0%
!! AGATAATTTGTTGCAGCATA+AGG + chr3_4:2776532-2776551 None:intergenic 30.0%
! GCTTTTAATAAAGAGGAAGT+TGG - chr3_4:2776586-2776605 Msa0485210:CDS 30.0%
AATGTGATGACTCTACTAAT+GGG - chr3_4:2776610-2776629 Msa0485210:CDS 30.0%
ACTCATGAGTATACTTGAAA+AGG - chr3_4:2776744-2776763 Msa0485210:CDS 30.0%
ATGAGTATACTTGAAAAGGA+AGG - chr3_4:2776748-2776767 Msa0485210:CDS 30.0%
TGAGTATACTTGAAAAGGAA+GGG - chr3_4:2776749-2776768 Msa0485210:CDS 30.0%
TTAGGAAGAGAAAACAGATA+CGG - chr3_4:2776950-2776969 Msa0485210:CDS 30.0%
AGATACGGCATTATAACTTT+AGG - chr3_4:2776965-2776984 Msa0485210:CDS 30.0%
AACAAATGTGTCCCATATTA+TGG - chr3_4:2777128-2777147 Msa0485210:five_prime_UTR 30.0%
!!! AAGATATTTTGGGACAAATG+TGG + chr3_4:2775174-2775193 None:intergenic 30.0%
! CTTTTAGTAATAAGAGTTGG+AGG + chr3_4:2775413-2775432 None:intergenic 30.0%
TTCATCGAAGAGTTAAGTAT+TGG + chr3_4:2775455-2775474 None:intergenic 30.0%
!! AATGGATTGAAACACTTCAT+GGG + chr3_4:2775744-2775763 None:intergenic 30.0%
!! TAATGGATTGAAACACTTCA+TGG + chr3_4:2775745-2775764 None:intergenic 30.0%
! TGAAGTGTTTCAATCCATTA+TGG - chr3_4:2775745-2775764 Msa0485210:CDS 30.0%
!! TTGATAATTTTGCTCTCACA+TGG - chr3_4:2776327-2776346 Msa0485210:intron 30.0%
GTTTATGCTTAATTGTAGAG+AGG - chr3_4:2776406-2776425 Msa0485210:intron 30.0%
TTATGCTTAATTGTAGAGAG+GGG - chr3_4:2776408-2776427 Msa0485210:intron 30.0%
!! GATAATTTGTTGCAGCATAA+GGG + chr3_4:2776531-2776550 None:intergenic 30.0%
!! AGATAATTTGTTGCAGCATA+AGG + chr3_4:2776532-2776551 None:intergenic 30.0%
! GCTTTTAATAAAGAGGAAGT+TGG - chr3_4:2776586-2776605 Msa0485210:CDS 30.0%
AATGTGATGACTCTACTAAT+GGG - chr3_4:2776610-2776629 Msa0485210:CDS 30.0%
ACTCATGAGTATACTTGAAA+AGG - chr3_4:2776744-2776763 Msa0485210:CDS 30.0%
ATGAGTATACTTGAAAAGGA+AGG - chr3_4:2776748-2776767 Msa0485210:CDS 30.0%
TGAGTATACTTGAAAAGGAA+GGG - chr3_4:2776749-2776768 Msa0485210:CDS 30.0%
TTAGGAAGAGAAAACAGATA+CGG - chr3_4:2776950-2776969 Msa0485210:CDS 30.0%
AGATACGGCATTATAACTTT+AGG - chr3_4:2776965-2776984 Msa0485210:CDS 30.0%
AACAAATGTGTCCCATATTA+TGG - chr3_4:2777128-2777147 Msa0485210:five_prime_UTR 30.0%
GGAATAGCTTCAACCTTAAA+AGG + chr3_4:2775199-2775218 None:intergenic 35.0%
! AATAACTTGTGTTGGAGCTT+AGG - chr3_4:2775245-2775264 Msa0485210:three_prime_UTR 35.0%
ATGCTTGCAAATAAGGTAGT+TGG + chr3_4:2775353-2775372 None:intergenic 35.0%
! ACTACCTTATTTGCAAGCAT+TGG - chr3_4:2775353-2775372 Msa0485210:three_prime_UTR 35.0%
TTGACCAATGCTTGCAAATA+AGG + chr3_4:2775360-2775379 None:intergenic 35.0%
GTAATAAGAGTTGGAGGATT+TGG + chr3_4:2775407-2775426 None:intergenic 35.0%
!!! GTTAAGTATTGGACGTTTTG+TGG + chr3_4:2775444-2775463 None:intergenic 35.0%
! GGAATTTGAAAAGTTGGTTC+AGG + chr3_4:2775491-2775510 None:intergenic 35.0%
! TTTTTCCTTTCATCATGCCA+AGG + chr3_4:2775565-2775584 None:intergenic 35.0%
CTTATCAATCTTCTCAGTGA+TGG + chr3_4:2775626-2775645 None:intergenic 35.0%
TCACTGAGAAGATTGATAAG+TGG - chr3_4:2775626-2775645 Msa0485210:CDS 35.0%
CACTGAGAAGATTGATAAGT+GGG - chr3_4:2775627-2775646 Msa0485210:CDS 35.0%
ACTGAGAAGATTGATAAGTG+GGG - chr3_4:2775628-2775647 Msa0485210:CDS 35.0%
! ATAAGGACACATTTGATGGT+GGG - chr3_4:2775698-2775717 Msa0485210:CDS 35.0%
CAATCCATTATGGAAGTTGA+TGG - chr3_4:2775755-2775774 Msa0485210:CDS 35.0%
AAGCAATTGTCTCCTAAACT+TGG - chr3_4:2776167-2776186 Msa0485210:intron 35.0%
TAAGCATAAACTCGTATCAG+TGG + chr3_4:2776397-2776416 None:intergenic 35.0%
GTGAGAATTGTTAGAGAAGA+AGG - chr3_4:2776457-2776476 Msa0485210:CDS 35.0%
GAATGTGATGACTCTACTAA+TGG - chr3_4:2776609-2776628 Msa0485210:CDS 35.0%
TGTAGGCTTATATAGAGGTT+TGG - chr3_4:2776774-2776793 Msa0485210:CDS 35.0%
GTAGGCTTATATAGAGGTTT+GGG - chr3_4:2776775-2776794 Msa0485210:CDS 35.0%
! GGAACTAATTTTAAGCAGCT+TGG + chr3_4:2776802-2776821 None:intergenic 35.0%
TTAAAATTAGTTCCAGCTGC+TGG - chr3_4:2776808-2776827 Msa0485210:CDS 35.0%
TAAAATTAGTTCCAGCTGCT+GGG - chr3_4:2776809-2776828 Msa0485210:CDS 35.0%
TCGAAACTGGAAAATAGTCA+AGG + chr3_4:2777010-2777029 None:intergenic 35.0%
TCAATGTACTAATATCACCC+TGG + chr3_4:2777033-2777052 None:intergenic 35.0%
GGAATAGCTTCAACCTTAAA+AGG + chr3_4:2775199-2775218 None:intergenic 35.0%
! AATAACTTGTGTTGGAGCTT+AGG - chr3_4:2775245-2775264 Msa0485210:three_prime_UTR 35.0%
ATGCTTGCAAATAAGGTAGT+TGG + chr3_4:2775353-2775372 None:intergenic 35.0%
! ACTACCTTATTTGCAAGCAT+TGG - chr3_4:2775353-2775372 Msa0485210:three_prime_UTR 35.0%
TTGACCAATGCTTGCAAATA+AGG + chr3_4:2775360-2775379 None:intergenic 35.0%
GTAATAAGAGTTGGAGGATT+TGG + chr3_4:2775407-2775426 None:intergenic 35.0%
!!! GTTAAGTATTGGACGTTTTG+TGG + chr3_4:2775444-2775463 None:intergenic 35.0%
! GGAATTTGAAAAGTTGGTTC+AGG + chr3_4:2775491-2775510 None:intergenic 35.0%
! TTTTTCCTTTCATCATGCCA+AGG + chr3_4:2775565-2775584 None:intergenic 35.0%
CTTATCAATCTTCTCAGTGA+TGG + chr3_4:2775626-2775645 None:intergenic 35.0%
TCACTGAGAAGATTGATAAG+TGG - chr3_4:2775626-2775645 Msa0485210:CDS 35.0%
CACTGAGAAGATTGATAAGT+GGG - chr3_4:2775627-2775646 Msa0485210:CDS 35.0%
ACTGAGAAGATTGATAAGTG+GGG - chr3_4:2775628-2775647 Msa0485210:CDS 35.0%
! ATAAGGACACATTTGATGGT+GGG - chr3_4:2775698-2775717 Msa0485210:CDS 35.0%
CAATCCATTATGGAAGTTGA+TGG - chr3_4:2775755-2775774 Msa0485210:CDS 35.0%
AAGCAATTGTCTCCTAAACT+TGG - chr3_4:2776167-2776186 Msa0485210:intron 35.0%
TAAGCATAAACTCGTATCAG+TGG + chr3_4:2776397-2776416 None:intergenic 35.0%
GTGAGAATTGTTAGAGAAGA+AGG - chr3_4:2776457-2776476 Msa0485210:CDS 35.0%
GAATGTGATGACTCTACTAA+TGG - chr3_4:2776609-2776628 Msa0485210:CDS 35.0%
TGTAGGCTTATATAGAGGTT+TGG - chr3_4:2776774-2776793 Msa0485210:CDS 35.0%
GTAGGCTTATATAGAGGTTT+GGG - chr3_4:2776775-2776794 Msa0485210:CDS 35.0%
! GGAACTAATTTTAAGCAGCT+TGG + chr3_4:2776802-2776821 None:intergenic 35.0%
TTAAAATTAGTTCCAGCTGC+TGG - chr3_4:2776808-2776827 Msa0485210:CDS 35.0%
TAAAATTAGTTCCAGCTGCT+GGG - chr3_4:2776809-2776828 Msa0485210:CDS 35.0%
TCGAAACTGGAAAATAGTCA+AGG + chr3_4:2777010-2777029 None:intergenic 35.0%
TCAATGTACTAATATCACCC+TGG + chr3_4:2777033-2777052 None:intergenic 35.0%
TTCTTCAGCTTCTCCTATGT+TGG - chr3_4:2775126-2775145 Msa0485210:three_prime_UTR 40.0%
GAATATGCTCTGTCCAACAT+AGG + chr3_4:2775142-2775161 None:intergenic 40.0%
TCAAGCTGGATTTGGATTTG+TGG - chr3_4:2775376-2775395 Msa0485210:three_prime_UTR 40.0%
TCAAGGGTTACTTAATGGTG+CGG - chr3_4:2775517-2775536 Msa0485210:CDS 40.0%
GCATTGAAAGTTGTTGAGGA+AGG - chr3_4:2775539-2775558 Msa0485210:CDS 40.0%
TGTGTCCTTATGGTCTCTAA+CGG + chr3_4:2775689-2775708 None:intergenic 40.0%
GACCATAAGGACACATTTGA+TGG - chr3_4:2775694-2775713 Msa0485210:CDS 40.0%
CACCATCAAATGTGTCCTTA+TGG + chr3_4:2775699-2775718 None:intergenic 40.0%
CATAAGGACACATTTGATGG+TGG - chr3_4:2775697-2775716 Msa0485210:CDS 40.0%
!! TAAGGACACATTTGATGGTG+GGG - chr3_4:2775699-2775718 Msa0485210:CDS 40.0%
CCATCCATCAACTTCCATAA+TGG + chr3_4:2775762-2775781 None:intergenic 40.0%
!! CCATTATGGAAGTTGATGGA+TGG - chr3_4:2775759-2775778 Msa0485210:CDS 40.0%
!! TATGGAAGTTGATGGATGGA+AGG - chr3_4:2775763-2775782 Msa0485210:CDS 40.0%
!! ATGGAAGTTGATGGATGGAA+GGG - chr3_4:2775764-2775783 Msa0485210:CDS 40.0%
!!! GAGTTTTGAGTAGCTCTAGA+GGG + chr3_4:2776271-2776290 None:intergenic 40.0%
CAAAACTCGTCTAACTGTTC+AGG - chr3_4:2776283-2776302 Msa0485210:intron 40.0%
CATAAACTCGTATCAGTGGT+GGG + chr3_4:2776393-2776412 None:intergenic 40.0%
!! AGGGGTGTACAAGAATTTTG+TGG - chr3_4:2776426-2776445 Msa0485210:intron 40.0%
! GGGATTACACCGATTAAACT+CGG + chr3_4:2776511-2776530 None:intergenic 40.0%
! ACTATTTTCCAGTTTCGACC+AGG - chr3_4:2777012-2777031 Msa0485210:exon 40.0%
! CTATTTTCCAGTTTCGACCA+GGG - chr3_4:2777013-2777032 Msa0485210:exon 40.0%
TTCTTCAGCTTCTCCTATGT+TGG - chr3_4:2775126-2775145 Msa0485210:three_prime_UTR 40.0%
GAATATGCTCTGTCCAACAT+AGG + chr3_4:2775142-2775161 None:intergenic 40.0%
TCAAGCTGGATTTGGATTTG+TGG - chr3_4:2775376-2775395 Msa0485210:three_prime_UTR 40.0%
TCAAGGGTTACTTAATGGTG+CGG - chr3_4:2775517-2775536 Msa0485210:CDS 40.0%
GCATTGAAAGTTGTTGAGGA+AGG - chr3_4:2775539-2775558 Msa0485210:CDS 40.0%
TGTGTCCTTATGGTCTCTAA+CGG + chr3_4:2775689-2775708 None:intergenic 40.0%
GACCATAAGGACACATTTGA+TGG - chr3_4:2775694-2775713 Msa0485210:CDS 40.0%
CACCATCAAATGTGTCCTTA+TGG + chr3_4:2775699-2775718 None:intergenic 40.0%
CATAAGGACACATTTGATGG+TGG - chr3_4:2775697-2775716 Msa0485210:CDS 40.0%
!! TAAGGACACATTTGATGGTG+GGG - chr3_4:2775699-2775718 Msa0485210:CDS 40.0%
CCATCCATCAACTTCCATAA+TGG + chr3_4:2775762-2775781 None:intergenic 40.0%
!! CCATTATGGAAGTTGATGGA+TGG - chr3_4:2775759-2775778 Msa0485210:CDS 40.0%
!! TATGGAAGTTGATGGATGGA+AGG - chr3_4:2775763-2775782 Msa0485210:CDS 40.0%
!! ATGGAAGTTGATGGATGGAA+GGG - chr3_4:2775764-2775783 Msa0485210:CDS 40.0%
!!! GAGTTTTGAGTAGCTCTAGA+GGG + chr3_4:2776271-2776290 None:intergenic 40.0%
CAAAACTCGTCTAACTGTTC+AGG - chr3_4:2776283-2776302 Msa0485210:intron 40.0%
CATAAACTCGTATCAGTGGT+GGG + chr3_4:2776393-2776412 None:intergenic 40.0%
!! AGGGGTGTACAAGAATTTTG+TGG - chr3_4:2776426-2776445 Msa0485210:intron 40.0%
! GGGATTACACCGATTAAACT+CGG + chr3_4:2776511-2776530 None:intergenic 40.0%
! ACTATTTTCCAGTTTCGACC+AGG - chr3_4:2777012-2777031 Msa0485210:exon 40.0%
! CTATTTTCCAGTTTCGACCA+GGG - chr3_4:2777013-2777032 Msa0485210:exon 40.0%
GTGTTGGAGCTTAGGATCAA+TGG - chr3_4:2775253-2775272 Msa0485210:three_prime_UTR 45.0%
GGATCAATGGCTACTGAATC+TGG - chr3_4:2775266-2775285 Msa0485210:three_prime_UTR 45.0%
!! TTTGCAAGCATTGGTCAAGC+TGG - chr3_4:2775362-2775381 Msa0485210:three_prime_UTR 45.0%
!! AGCATTGGTCAAGCTGGATT+TGG - chr3_4:2775368-2775387 Msa0485210:three_prime_UTR 45.0%
! TGCGGCATTGAAAGTTGTTG+AGG - chr3_4:2775535-2775554 Msa0485210:CDS 45.0%
AAAGTTGTTGAGGAAGGCCT+TGG - chr3_4:2775545-2775564 Msa0485210:CDS 45.0%
TTGATAAGTGGGGCAATTGC+TGG - chr3_4:2775638-2775657 Msa0485210:CDS 45.0%
TGCAGTGTCAAGAACAGTTG+TGG - chr3_4:2775661-2775680 Msa0485210:CDS 45.0%
ATGGATGGAAGGGATTGTTC+AGG - chr3_4:2775774-2775793 Msa0485210:CDS 45.0%
TGGATGGAAGGGATTGTTCA+GGG - chr3_4:2775775-2775794 Msa0485210:CDS 45.0%
GGGATTGTTCAGGGGAAATT+TGG - chr3_4:2775784-2775803 Msa0485210:CDS 45.0%
TTCGGCTGTTCTCCAAGTTT+AGG + chr3_4:2776182-2776201 None:intergenic 45.0%
! GAGGCAGGAATCGGAATTTT+CGG + chr3_4:2776200-2776219 None:intergenic 45.0%
! CTCTAGAGGGTATGTGCATA+GGG + chr3_4:2776258-2776277 None:intergenic 45.0%
!!! CGAGTTTTGAGTAGCTCTAG+AGG + chr3_4:2776272-2776291 None:intergenic 45.0%
GCATAAACTCGTATCAGTGG+TGG + chr3_4:2776394-2776413 None:intergenic 45.0%
GGACTGACACCGAGTTTAAT+CGG - chr3_4:2776499-2776518 Msa0485210:CDS 45.0%
CTCGTAAGCATATGCAAGCT+GGG - chr3_4:2776683-2776702 Msa0485210:CDS 45.0%
TCGTAAGCATATGCAAGCTG+GGG - chr3_4:2776684-2776703 Msa0485210:CDS 45.0%
CTTGAAAAGGAAGGGCTTGT+AGG - chr3_4:2776757-2776776 Msa0485210:CDS 45.0%
GGGCTTGTAGGCTTATATAG+AGG - chr3_4:2776769-2776788 Msa0485210:CDS 45.0%
TGTGTTACGAAGCTTGCAAG+AGG - chr3_4:2776842-2776861 Msa0485210:CDS 45.0%
AATATCACCCTGGTCGAAAC+TGG + chr3_4:2777023-2777042 None:intergenic 45.0%
GTGTTGGAGCTTAGGATCAA+TGG - chr3_4:2775253-2775272 Msa0485210:three_prime_UTR 45.0%
GGATCAATGGCTACTGAATC+TGG - chr3_4:2775266-2775285 Msa0485210:three_prime_UTR 45.0%
!! TTTGCAAGCATTGGTCAAGC+TGG - chr3_4:2775362-2775381 Msa0485210:three_prime_UTR 45.0%
!! AGCATTGGTCAAGCTGGATT+TGG - chr3_4:2775368-2775387 Msa0485210:three_prime_UTR 45.0%
! TGCGGCATTGAAAGTTGTTG+AGG - chr3_4:2775535-2775554 Msa0485210:CDS 45.0%
AAAGTTGTTGAGGAAGGCCT+TGG - chr3_4:2775545-2775564 Msa0485210:CDS 45.0%
TTGATAAGTGGGGCAATTGC+TGG - chr3_4:2775638-2775657 Msa0485210:CDS 45.0%
TGCAGTGTCAAGAACAGTTG+TGG - chr3_4:2775661-2775680 Msa0485210:CDS 45.0%
ATGGATGGAAGGGATTGTTC+AGG - chr3_4:2775774-2775793 Msa0485210:CDS 45.0%
TGGATGGAAGGGATTGTTCA+GGG - chr3_4:2775775-2775794 Msa0485210:CDS 45.0%
GGGATTGTTCAGGGGAAATT+TGG - chr3_4:2775784-2775803 Msa0485210:CDS 45.0%
TTCGGCTGTTCTCCAAGTTT+AGG + chr3_4:2776182-2776201 None:intergenic 45.0%
! GAGGCAGGAATCGGAATTTT+CGG + chr3_4:2776200-2776219 None:intergenic 45.0%
! CTCTAGAGGGTATGTGCATA+GGG + chr3_4:2776258-2776277 None:intergenic 45.0%
!!! CGAGTTTTGAGTAGCTCTAG+AGG + chr3_4:2776272-2776291 None:intergenic 45.0%
GCATAAACTCGTATCAGTGG+TGG + chr3_4:2776394-2776413 None:intergenic 45.0%
GGACTGACACCGAGTTTAAT+CGG - chr3_4:2776499-2776518 Msa0485210:CDS 45.0%
CTCGTAAGCATATGCAAGCT+GGG - chr3_4:2776683-2776702 Msa0485210:CDS 45.0%
TCGTAAGCATATGCAAGCTG+GGG - chr3_4:2776684-2776703 Msa0485210:CDS 45.0%
CTTGAAAAGGAAGGGCTTGT+AGG - chr3_4:2776757-2776776 Msa0485210:CDS 45.0%
GGGCTTGTAGGCTTATATAG+AGG - chr3_4:2776769-2776788 Msa0485210:CDS 45.0%
TGTGTTACGAAGCTTGCAAG+AGG - chr3_4:2776842-2776861 Msa0485210:CDS 45.0%
AATATCACCCTGGTCGAAAC+TGG + chr3_4:2777023-2777042 None:intergenic 45.0%
GAAGGCCTTGGCATGATGAA+AGG - chr3_4:2775557-2775576 Msa0485210:CDS 50.0%
TGGCACCGTTAGAGACCATA+AGG - chr3_4:2775681-2775700 Msa0485210:CDS 50.0%
!! CATTTGATGGTGGGGAGTTG+TGG - chr3_4:2775707-2775726 Msa0485210:CDS 50.0%
GGATGGAAGGGATTGTTCAG+GGG - chr3_4:2775776-2775795 Msa0485210:CDS 50.0%
! CTCACCTCAATAGCCTTGCT+TGG + chr3_4:2775830-2775849 None:intergenic 50.0%
GCAATTGACGAGGCAGGAAT+CGG + chr3_4:2776209-2776228 None:intergenic 50.0%
ATTCCTGCCTCGTCAATTGC+AGG - chr3_4:2776209-2776228 Msa0485210:intron 50.0%
TACAGCACCTGCAATTGACG+AGG + chr3_4:2776219-2776238 None:intergenic 50.0%
! TCAATTGCAGGTGCTGTAGC+TGG - chr3_4:2776221-2776240 Msa0485210:intron 50.0%
!! GCTCTAGAGGGTATGTGCAT+AGG + chr3_4:2776259-2776278 None:intergenic 50.0%
AGTCCTCTGTACAACTCTGC+TGG + chr3_4:2776484-2776503 None:intergenic 50.0%
CTACTAATGGGATCAGCTGC+TGG - chr3_4:2776622-2776641 Msa0485210:CDS 50.0%
GCTCGTAAGCATATGCAAGC+TGG - chr3_4:2776682-2776701 Msa0485210:CDS 50.0%
! ATGCAAGCTGGGGCACTAAA+TGG - chr3_4:2776694-2776713 Msa0485210:CDS 50.0%
ATGAAAGAGATCCCAGCAGC+TGG + chr3_4:2776823-2776842 None:intergenic 50.0%
GAAGGCCTTGGCATGATGAA+AGG - chr3_4:2775557-2775576 Msa0485210:CDS 50.0%
TGGCACCGTTAGAGACCATA+AGG - chr3_4:2775681-2775700 Msa0485210:CDS 50.0%
!! CATTTGATGGTGGGGAGTTG+TGG - chr3_4:2775707-2775726 Msa0485210:CDS 50.0%
GGATGGAAGGGATTGTTCAG+GGG - chr3_4:2775776-2775795 Msa0485210:CDS 50.0%
! CTCACCTCAATAGCCTTGCT+TGG + chr3_4:2775830-2775849 None:intergenic 50.0%
GCAATTGACGAGGCAGGAAT+CGG + chr3_4:2776209-2776228 None:intergenic 50.0%
ATTCCTGCCTCGTCAATTGC+AGG - chr3_4:2776209-2776228 Msa0485210:intron 50.0%
TACAGCACCTGCAATTGACG+AGG + chr3_4:2776219-2776238 None:intergenic 50.0%
! TCAATTGCAGGTGCTGTAGC+TGG - chr3_4:2776221-2776240 Msa0485210:intron 50.0%
!! GCTCTAGAGGGTATGTGCAT+AGG + chr3_4:2776259-2776278 None:intergenic 50.0%
AGTCCTCTGTACAACTCTGC+TGG + chr3_4:2776484-2776503 None:intergenic 50.0%
CTACTAATGGGATCAGCTGC+TGG - chr3_4:2776622-2776641 Msa0485210:CDS 50.0%
GCTCGTAAGCATATGCAAGC+TGG - chr3_4:2776682-2776701 Msa0485210:CDS 50.0%
! ATGCAAGCTGGGGCACTAAA+TGG - chr3_4:2776694-2776713 Msa0485210:CDS 50.0%
ATGAAAGAGATCCCAGCAGC+TGG + chr3_4:2776823-2776842 None:intergenic 50.0%
! TAGCCTTGCTTGGCGCAACT+CGG + chr3_4:2775820-2775839 None:intergenic 55.0%
TGCGCCAAGCAAGGCTATTG+AGG - chr3_4:2775823-2775842 Msa0485210:CDS 55.0%
GGTCCAGCAGAGTTGTACAG+AGG - chr3_4:2776478-2776497 Msa0485210:CDS 55.0%
CAGTGCAACATTCCCACTCG+AGG - chr3_4:2776657-2776676 Msa0485210:CDS 55.0%
TGCAACATTCCCACTCGAGG+TGG - chr3_4:2776660-2776679 Msa0485210:CDS 55.0%
! TAGCCTTGCTTGGCGCAACT+CGG + chr3_4:2775820-2775839 None:intergenic 55.0%
TGCGCCAAGCAAGGCTATTG+AGG - chr3_4:2775823-2775842 Msa0485210:CDS 55.0%
GGTCCAGCAGAGTTGTACAG+AGG - chr3_4:2776478-2776497 Msa0485210:CDS 55.0%
CAGTGCAACATTCCCACTCG+AGG - chr3_4:2776657-2776676 Msa0485210:CDS 55.0%
TGCAACATTCCCACTCGAGG+TGG - chr3_4:2776660-2776679 Msa0485210:CDS 55.0%
CATCCGAGTTGCGCCAAGCA+AGG - chr3_4:2775814-2775833 Msa0485210:CDS 60.0%
GCACCTGCAATTGACGAGGC+AGG + chr3_4:2776215-2776234 None:intergenic 60.0%
GCTTACGAGCCACCTCGAGT+GGG + chr3_4:2776672-2776691 None:intergenic 60.0%
TGCTTACGAGCCACCTCGAG+TGG + chr3_4:2776673-2776692 None:intergenic 60.0%
CATCCGAGTTGCGCCAAGCA+AGG - chr3_4:2775814-2775833 Msa0485210:CDS 60.0%
GCACCTGCAATTGACGAGGC+AGG + chr3_4:2776215-2776234 None:intergenic 60.0%
GCTTACGAGCCACCTCGAGT+GGG + chr3_4:2776672-2776691 None:intergenic 60.0%
TGCTTACGAGCCACCTCGAG+TGG + chr3_4:2776673-2776692 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 2775103 2777196 2775103 ID=Msa0485210;Name=Msa0485210
chr3_4 mRNA 2775103 2777196 2775103 ID=Msa0485210-mRNA-1;Parent=Msa0485210;Name=Msa0485210-mRNA-1;_AED=0.00;_eAED=0.00;_QI=169|1|1|1|1|1|3|305|400
chr3_4 exon 2775103 2775875 2775103 ID=Msa0485210-mRNA-1:exon:946;Parent=Msa0485210-mRNA-1
chr3_4 exon 2775995 2776156 2775995 ID=Msa0485210-mRNA-1:exon:945;Parent=Msa0485210-mRNA-1
chr3_4 exon 2776455 2777196 2776455 ID=Msa0485210-mRNA-1:exon:944;Parent=Msa0485210-mRNA-1
chr3_4 five_prime_UTR 2777028 2777196 2777028 ID=Msa0485210-mRNA-1:five_prime_utr;Parent=Msa0485210-mRNA-1
chr3_4 CDS 2776455 2777027 2776455 ID=Msa0485210-mRNA-1:cds;Parent=Msa0485210-mRNA-1
chr3_4 CDS 2775995 2776156 2775995 ID=Msa0485210-mRNA-1:cds;Parent=Msa0485210-mRNA-1
chr3_4 CDS 2775408 2775875 2775408 ID=Msa0485210-mRNA-1:cds;Parent=Msa0485210-mRNA-1
chr3_4 three_prime_UTR 2775103 2775407 2775103 ID=Msa0485210-mRNA-1:three_prime_utr;Parent=Msa0485210-mRNA-1
Gene Sequence

>Msa0485210

ATGGCTACTGAATCTGGTTATAGAGATATAGTAATATGCAATTCTGGAATAAAGTTTGATTATGGGACTAATCTTCATCCAACTACCTTATTTGCAAGCATTGGTCAAGCTGGATTTGGATTTGTGGCTTCACCAAATCCTCCAACTCTTATTACTAAAAGAGATAGTGCCACAAAACGTCCAATACTTAACTCTTCGATGAAATATGCTTTAATACCTGAACCAACTTTTCAAATTCCAAATTTTCAAGGGTTACTTAATGGTGCGGCATTGAAAGTTGTTGAGGAAGGCCTTGGCATGATGAAAGGAAAAAATTTGAAGGGGTTTAACGTGAAATTCAAGATTGGGAATCCATCACTGAGAAGATTGATAAGTGGGGCAATTGCTGGTGCAGTGTCAAGAACAGTTGTGGCACCGTTAGAGACCATAAGGACACATTTGATGGTGGGGAGTTGTGGACATAATACAACCCATGAAGTGTTTCAATCCATTATGGAAGTTGATGGATGGAAGGGATTGTTCAGGGGAAATTTGGTGAATATCATCCGAGTTGCGCCAAGCAAGGCTATTGAGTTATTTGCATATGATACTGTCAAGAAGCAATTGTCTCCTAAACTTGGAGAACAGCCGAAAATTCCGATTCCTGCCTCGTCAATTGCAGGTGCTGTAGCTGGAGTTAGCTCTACCCTATGCACATACCCTCTAGAGCTACTCAAAACTCGTCTAACTGTTCAGAGAGGGGTGTACAAGAATTTTGTGGATGCATTTGTGAGAATTGTTAGAGAAGAAGGTCCAGCAGAGTTGTACAGAGGACTGACACCGAGTTTAATCGGTGTAATCCCTTATGCTGCAACAAATTATCTAGCTTATGACACACTTAGAAAAGCTTACAAGAAAGCTTTTAATAAAGAGGAAGTTGGGAATGTGATGACTCTACTAATGGGATCAGCTGCTGGAGCATTTTCATGCAGTGCAACATTCCCACTCGAGGTGGCTCGTAAGCATATGCAAGCTGGGGCACTAAATGGAAGACAATACAGTAATATGCTTCAAGCACTCATGAGTATACTTGAAAAGGAAGGGCTTGTAGGCTTATATAGAGGTTTGGGACCAAGCTGCTTAAAATTAGTTCCAGCTGCTGGGATCTCTTTCATGTGTTACGAAGCTTGCAAGAGGTTACTTGTTGAAAATGAAGAAAATTAG
Protein sequence

>Msa0485210

MATESGYRDIVICNSGIKFDYGTNLHPTTLFASIGQAGFGFVASPNPPTLITKRDSATKRPILNSSMKYALIPEPTFQIPNFQGLLNGAALKVVEEGLGMMKGKNLKGFNVKFKIGNPSLRRLISGAIAGAVSRTVVAPLETIRTHLMVGSCGHNTTHEVFQSIMEVDGWKGLFRGNLVNIIRVAPSKAIELFAYDTVKKQLSPKLGEQPKIPIPASSIAGAVAGVSSTLCTYPLELLKTRLTVQRGVYKNFVDAFVRIVREEGPAELYRGLTPSLIGVIPYAATNYLAYDTLRKAYKKAFNKEEVGNVMTLLMGSAAGAFSCSATFPLEVARKHMQAGALNGRQYSNMLQALMSILEKEGLVGLYRGLGPSCLKLVPAAGISFMCYEACKRLLVENEEN*