Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85380.t1 | KEH37469.1 | 82.8 | 541 | 91 | 2 | 1 | 540 | 1 | 540 | 3.70E-223 | 784.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85380.t1 | A0A072V610 | 82.8 | 541 | 91 | 2 | 1 | 540 | 1 | 540 | 2.7e-223 | 784.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene85380 | 0.814207 | 1.73E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene85380 | 0.859762 | 3.30E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene85380 | 0.821014 | 5.06E-53 | -1.69E-46 |
| MS.gene049265 | MS.gene85380 | -0.814965 | 1.18E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene85380 | 0.829404 | 5.25E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene85380 | 0.832379 | 9.78E-56 | -1.69E-46 |
| MS.gene049351 | MS.gene85380 | 0.820719 | 5.91E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene85380 | -0.822426 | 2.38E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene85380 | 0.800203 | 1.61E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene85380 | 0.838132 | 3.45E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene85380 | 0.814173 | 1.76E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene85380 | 0.803863 | 2.85E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene85380 | 0.844476 | 7.38E-59 | -1.69E-46 |
| MS.gene050076 | MS.gene85380 | 0.833825 | 4.27E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene85380 | 0.829285 | 5.61E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene85380 | 0.822275 | 2.58E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene85380 | 0.819464 | 1.15E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene85380 | 0.848163 | 7.30E-60 | -1.69E-46 |
| MS.gene050432 | MS.gene85380 | 0.816216 | 6.20E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene85380 | 0.830352 | 3.08E-55 | -1.69E-46 |
| MS.gene050475 | MS.gene85380 | -0.809445 | 1.89E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene85380 | 0.808848 | 2.53E-50 | -1.69E-46 |
| MS.gene050541 | MS.gene85380 | -0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene85380 | 0.824135 | 9.51E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene85380 | 0.818681 | 1.73E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene85380 | 0.82142 | 4.08E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene85380 | 0.816826 | 4.53E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene85380 | 0.800325 | 1.52E-48 | -1.69E-46 |
| MS.gene050767 | MS.gene85380 | 0.812376 | 4.37E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene85380 | 0.816813 | 4.56E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene85380 | 0.849349 | 3.42E-60 | -1.69E-46 |
| MS.gene05079 | MS.gene85380 | -0.814993 | 1.16E-51 | -1.69E-46 |
| MS.gene050800 | MS.gene85380 | -0.801405 | 9.14E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene85380 | 0.823521 | 1.32E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene85380 | 0.834666 | 2.63E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene85380 | 0.827256 | 1.73E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene85380 | 0.82563 | 4.22E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene85380 | 0.849243 | 3.67E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene85380 | 0.863428 | 2.51E-64 | -1.69E-46 |
| MS.gene051949 | MS.gene85380 | 0.813317 | 2.72E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene85380 | 0.831227 | 1.88E-55 | -1.69E-46 |
| MS.gene052290 | MS.gene85380 | 0.826085 | 3.29E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene85380 | 0.878091 | 3.72E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene85380 | 0.804478 | 2.12E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene85380 | 0.812055 | 5.14E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene85380 | 0.850521 | 1.61E-60 | -1.69E-46 |
| MS.gene052805 | MS.gene85380 | -0.805944 | 1.05E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene85380 | 0.821221 | 4.53E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene85380 | 0.824372 | 8.36E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene85380 | 0.812344 | 4.44E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene85380 | 0.802188 | 6.32E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene85380 | 0.825496 | 4.54E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene85380 | 0.825214 | 5.30E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene85380 | 0.801705 | 7.94E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene85380 | 0.841753 | 3.93E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene85380 | 0.832048 | 1.18E-55 | -1.69E-46 |
| MS.gene053322 | MS.gene85380 | 0.859412 | 4.21E-63 | -1.69E-46 |
| MS.gene053420 | MS.gene85380 | -0.805031 | 1.62E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene85380 | 0.814155 | 1.78E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene85380 | 0.838418 | 2.91E-57 | -1.69E-46 |
| MS.gene053915 | MS.gene85380 | 0.83608 | 1.15E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene85380 | 0.831892 | 1.29E-55 | -1.69E-46 |
| MS.gene054376 | MS.gene85380 | 0.801847 | 7.42E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene85380 | 0.81734 | 3.47E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene85380 | 0.851176 | 1.05E-60 | -1.69E-46 |
| MS.gene054802 | MS.gene85380 | 0.833586 | 4.90E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene85380 | 0.82848 | 8.78E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene85380 | 0.834705 | 2.57E-56 | -1.69E-46 |
| MS.gene054955 | MS.gene85380 | 0.810185 | 1.31E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene85380 | 0.846437 | 2.17E-59 | -1.69E-46 |
| MS.gene055154 | MS.gene85380 | -0.809266 | 2.06E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene85380 | 0.858418 | 8.35E-63 | -1.69E-46 |
| MS.gene055254 | MS.gene85380 | 0.825796 | 3.86E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene85380 | 0.835827 | 1.34E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene85380 | 0.827208 | 1.78E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene85380 | 0.825731 | 3.99E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene85380 | 0.842935 | 1.91E-58 | -1.69E-46 |
| MS.gene055499 | MS.gene85380 | 0.845531 | 3.83E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene85380 | 0.828462 | 8.87E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene85380 | 0.82491 | 6.25E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene85380 | 0.825623 | 4.24E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene85380 | 0.856755 | 2.60E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene85380 | 0.843314 | 1.51E-58 | -1.69E-46 |
| MS.gene056083 | MS.gene85380 | 0.800508 | 1.39E-48 | -1.69E-46 |
| MS.gene056374 | MS.gene85380 | 0.814087 | 1.84E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene85380 | 0.81082 | 9.53E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene85380 | 0.816662 | 4.93E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene85380 | 0.825651 | 4.17E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene85380 | 0.839751 | 1.31E-57 | -1.69E-46 |
| MS.gene056903 | MS.gene85380 | 0.811518 | 6.73E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene85380 | 0.826115 | 3.24E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene85380 | 0.800679 | 1.29E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene85380 | 0.824429 | 8.11E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene85380 | 0.804366 | 2.24E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene85380 | 0.842564 | 2.39E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene85380 | 0.831964 | 1.24E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene85380 | 0.813518 | 2.46E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene85380 | 0.831233 | 1.88E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene85380 | 0.852656 | 4.00E-61 | -1.69E-46 |
| MS.gene058006 | MS.gene85380 | 0.841264 | 5.28E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene85380 | 0.805737 | 1.16E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene85380 | 0.824722 | 6.92E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene85380 | 0.842403 | 2.64E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene85380 | 0.82141 | 4.10E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene85380 | 0.832431 | 9.49E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene85380 | 0.815544 | 8.76E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene85380 | 0.810184 | 1.31E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene85380 | 0.815949 | 7.11E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene85380 | 0.801237 | 9.90E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene85380 | 0.842262 | 2.88E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene85380 | 0.802304 | 5.98E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene85380 | 0.836537 | 8.83E-57 | -1.69E-46 |
| MS.gene059536 | MS.gene85380 | 0.833415 | 5.40E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene85380 | 0.843168 | 1.65E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene85380 | 0.845312 | 4.39E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene85380 | 0.862746 | 4.07E-64 | -1.69E-46 |
| MS.gene059960 | MS.gene85380 | 0.839382 | 1.64E-57 | -1.69E-46 |
| MS.gene060193 | MS.gene85380 | 0.802577 | 5.25E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene85380 | 0.811504 | 6.77E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene85380 | 0.861394 | 1.06E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene85380 | 0.85437 | 1.29E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene85380 | 0.815724 | 7.98E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene85380 | 0.813525 | 2.45E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene85380 | 0.866418 | 2.89E-65 | -1.69E-46 |
| MS.gene061150 | MS.gene85380 | 0.813496 | 2.49E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene85380 | 0.839453 | 1.57E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85380.t1 | MTR_2g038710 | 83.919 | 541 | 85 | 2 | 1 | 540 | 1 | 540 | 0.0 | 887 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85380.t1 | AT5G56850 | 46.875 | 128 | 63 | 2 | 1 | 123 | 1 | 128 | 7.78e-31 | 126 |
| MS.gene85380.t1 | AT5G56850 | 46.875 | 128 | 63 | 2 | 1 | 123 | 1 | 128 | 1.10e-30 | 126 |
| MS.gene85380.t1 | AT5G56850 | 46.875 | 128 | 63 | 2 | 1 | 123 | 1 | 128 | 1.10e-30 | 126 |
| MS.gene85380.t1 | AT5G56850 | 43.902 | 82 | 45 | 1 | 43 | 123 | 5 | 86 | 5.71e-15 | 78.2 |
Find 110 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCAACAGGACTTTGTAAT+TGG | 0.129871 | 2.1:+47593232 | None:intergenic |
| TTTGAAACAGTTACAGTTTC+AGG | 0.156880 | 2.1:-47591827 | MS.gene85380:CDS |
| ATCTGGCAGGAGTACATTTA+AGG | 0.225316 | 2.1:-47594467 | MS.gene85380:intron |
| GGACTTACTTGATACTTTAT+TGG | 0.234536 | 2.1:+47592175 | None:intergenic |
| ATGTTTAATAGTTATGAATT+TGG | 0.277635 | 2.1:-47593355 | MS.gene85380:intron |
| AGAACATTGCAGATCAATAT+AGG | 0.285969 | 2.1:-47592870 | MS.gene85380:CDS |
| TATTATAGTGCTGGAATTCA+TGG | 0.287052 | 2.1:-47595056 | MS.gene85380:intron |
| CCAGGAACAATCCTGGTTTC+AGG | 0.291918 | 2.1:-47595160 | MS.gene85380:intron |
| CTCAAGCCATCAAAGAAGTT+TGG | 0.303084 | 2.1:-47591744 | MS.gene85380:CDS |
| CCCTGGTTGAACCTTCTTCT+CGG | 0.314639 | 2.1:+47592633 | None:intergenic |
| GATAACAGAGATGAAAATTC+TGG | 0.321341 | 2.1:-47591513 | MS.gene85380:CDS |
| TGTCACTTTCTGCACCTCTT+TGG | 0.325692 | 2.1:+47593507 | None:intergenic |
| CGTGGAACTTTCTTTGTCAT+TGG | 0.326048 | 2.1:+47593206 | None:intergenic |
| GAACAATAGCATACCCCTTA+TGG | 0.327544 | 2.1:+47595009 | None:intergenic |
| TTCTTCTGAGAGTCAACATT+TGG | 0.331749 | 2.1:-47592137 | MS.gene85380:CDS |
| GGAAATCCAAACTTCTTTGA+TGG | 0.341594 | 2.1:+47591738 | None:intergenic |
| CAGGAGGCTTCTTACAAGAT+AGG | 0.348900 | 2.1:-47592087 | MS.gene85380:CDS |
| AATGTACCACATACTGAAAC+TGG | 0.351776 | 2.1:-47591603 | MS.gene85380:CDS |
| ATGGATGTTGATGAAGAAAA+TGG | 0.359964 | 2.1:+47595028 | None:intergenic |
| GAACATTGCAGATCAATATA+GGG | 0.363626 | 2.1:-47592869 | MS.gene85380:CDS |
| GACCTCATCACTCGGGCTTA+AGG | 0.365085 | 2.1:+47593454 | None:intergenic |
| TTCTTCATCAACATCCATAA+GGG | 0.368786 | 2.1:-47595023 | MS.gene85380:CDS |
| CGGTCATTGAACACAGAATC+AGG | 0.368862 | 2.1:-47592106 | MS.gene85380:CDS |
| AAACAACCTCAGACAGTTAC+TGG | 0.375585 | 2.1:-47592754 | MS.gene85380:CDS |
| ACCTCATCACTCGGGCTTAA+GGG | 0.380541 | 2.1:+47593455 | None:intergenic |
| GATATTACAGAAAGGTGTTT+GGG | 0.386096 | 2.1:-47594442 | MS.gene85380:CDS |
| TGATATTACAGAAAGGTGTT+TGG | 0.387833 | 2.1:-47594443 | MS.gene85380:CDS |
| AATTAAGGACACCGTGCAAT+TGG | 0.388794 | 2.1:-47591996 | MS.gene85380:CDS |
| TCGTCACGAAGGCTAGTAAT+GGG | 0.396666 | 2.1:+47594633 | None:intergenic |
| AGAAAGTAAAGCGAAAATTA+AGG | 0.399900 | 2.1:-47592011 | MS.gene85380:CDS |
| CCTGAAACCAGGATTGTTCC+TGG | 0.408939 | 2.1:+47595160 | None:intergenic |
| GTCTGAGGTTGTTTCTCAAA+TGG | 0.416355 | 2.1:+47592763 | None:intergenic |
| TTTCTTCATCAACATCCATA+AGG | 0.416458 | 2.1:-47595024 | MS.gene85380:CDS |
| TTACTTTCTTCAATATGTAC+TGG | 0.418098 | 2.1:+47592025 | None:intergenic |
| AGTTTCAGGAAACATGCCTT+TGG | 0.433052 | 2.1:-47591813 | MS.gene85380:CDS |
| TTTCTCAAATGGTAACTCAT+TGG | 0.437143 | 2.1:+47592774 | None:intergenic |
| GGAGAACTCCTAGCAATGTT+AGG | 0.443960 | 2.1:-47592612 | MS.gene85380:CDS |
| GGTGATGATTCTTGAGAAGA+TGG | 0.446255 | 2.1:+47593285 | None:intergenic |
| TTCTGGAGGACCATTTGATC+AGG | 0.446366 | 2.1:-47591496 | MS.gene85380:CDS |
| CTTGGTAAGAAACTTGCAAC+AGG | 0.456620 | 2.1:-47592050 | MS.gene85380:CDS |
| TAGGGTGAAAAGTGCTTCCT+TGG | 0.458095 | 2.1:-47592068 | MS.gene85380:CDS |
| GAAAATAGAAAATGTGGATA+AGG | 0.459000 | 2.1:-47591714 | MS.gene85380:intron |
| GTTATCATCAGTAGAAGTAC+TGG | 0.459966 | 2.1:+47591530 | None:intergenic |
| GATGGAGCACTTAAAACATC+AGG | 0.463793 | 2.1:+47593303 | None:intergenic |
| TTTAAAATTCAGGATTCTGA+AGG | 0.468257 | 2.1:-47594603 | MS.gene85380:CDS |
| TTGTCATTGGATAAACCAAC+AGG | 0.468939 | 2.1:+47593219 | None:intergenic |
| ACATCAGGAGAAAGCCTTTG+AGG | 0.470123 | 2.1:+47593318 | None:intergenic |
| ACCAACAGGACTTTGTAATT+GGG | 0.474970 | 2.1:+47593233 | None:intergenic |
| TGGGAAGACATGTTTCCACT+TGG | 0.475277 | 2.1:-47594423 | MS.gene85380:CDS |
| TTGATGATAACCTGATCAAA+TGG | 0.477480 | 2.1:+47591486 | None:intergenic |
| AGCCCGAGTGATGAGGTCTC+AGG | 0.490629 | 2.1:-47593449 | MS.gene85380:intron |
| ACTTGATACTTTATTGGAGG+TGG | 0.493719 | 2.1:+47592181 | None:intergenic |
| CTTACTTGATACTTTATTGG+AGG | 0.495401 | 2.1:+47592178 | None:intergenic |
| TCAAATGGTAACTCATTGGC+AGG | 0.495949 | 2.1:+47592778 | None:intergenic |
| TCAGTTCCAGTTTCAGTATG+TGG | 0.500884 | 2.1:+47591597 | None:intergenic |
| GGGAAGACATGTTTCCACTT+GGG | 0.502659 | 2.1:-47594422 | MS.gene85380:CDS |
| TGCAATGCCAGGAACAATCC+TGG | 0.506580 | 2.1:-47595167 | None:intergenic |
| TCTTCAATATTCCGAGAAGA+AGG | 0.510014 | 2.1:-47592644 | MS.gene85380:CDS |
| TCGTGTTGAAGATGTTGCTT+TGG | 0.511404 | 2.1:+47593264 | None:intergenic |
| TGAGAGTCAACATTTGGAGC+AGG | 0.514270 | 2.1:-47592131 | MS.gene85380:CDS |
| AGCATATAGTAGAGATCAAG+AGG | 0.520557 | 2.1:-47591888 | MS.gene85380:CDS |
| ATATTTACTGCTTGTGACAC+AGG | 0.523930 | 2.1:+47592829 | None:intergenic |
| GGAAGACATGTTTCCACTTG+GGG | 0.525712 | 2.1:-47594421 | MS.gene85380:CDS |
| ATTCTGCACCCTGCAATGCC+AGG | 0.526840 | 2.1:-47595178 | None:intergenic |
| AGGAGGCTTCTTACAAGATA+GGG | 0.528120 | 2.1:-47592086 | MS.gene85380:CDS |
| GTCAACATTTGGAGCAGGAT+CGG | 0.534338 | 2.1:-47592126 | MS.gene85380:CDS |
| ATCGTCACGAAGGCTAGTAA+TGG | 0.537072 | 2.1:+47594632 | None:intergenic |
| AGCCTTTGAGGAAATGTATG+TGG | 0.545335 | 2.1:+47593330 | None:intergenic |
| TCCCAATTACAAAGTCCTGT+TGG | 0.548695 | 2.1:-47593234 | MS.gene85380:CDS |
| ATAATTGAATGCAGCTTCCA+TGG | 0.550018 | 2.1:-47594929 | MS.gene85380:intron |
| TTTCCCGAAAATAGAAAATG+TGG | 0.551322 | 2.1:-47591720 | MS.gene85380:CDS |
| AAACCTGAGACCTCATCACT+CGG | 0.555983 | 2.1:+47593446 | None:intergenic |
| GAATTCTTACACAGGATATG+AGG | 0.555986 | 2.1:-47592216 | MS.gene85380:intron |
| TTAAAATTCAGGATTCTGAA+GGG | 0.560085 | 2.1:-47594602 | MS.gene85380:CDS |
| CAAAACAAACTAGAGGATGA+TGG | 0.562404 | 2.1:-47592667 | MS.gene85380:CDS |
| TGAGGTGAGCAAGTATGAAA+AGG | 0.564247 | 2.1:-47591577 | MS.gene85380:CDS |
| AAGAAATAAAGATCAAGAAG+AGG | 0.565984 | 2.1:-47591927 | MS.gene85380:CDS |
| AAATACTAACCATCTAAGCC+AGG | 0.568110 | 2.1:-47591777 | MS.gene85380:CDS |
| TCCCACATACATTTCCTCAA+AGG | 0.572259 | 2.1:-47593332 | MS.gene85380:CDS |
| GGGAATGAAATATCGCGTGC+AGG | 0.574929 | 2.1:-47594582 | MS.gene85380:intron |
| ATCATTCAATTTGCACGTGG+AGG | 0.577439 | 2.1:-47592808 | MS.gene85380:CDS |
| GAGCAAGTATGAAAAGGTGC+AGG | 0.579255 | 2.1:-47591571 | MS.gene85380:CDS |
| TCTGAACCAGTAACTGTCTG+AGG | 0.579483 | 2.1:+47592748 | None:intergenic |
| TTAAGGTTGATATTACAGAA+AGG | 0.580085 | 2.1:-47594450 | MS.gene85380:CDS |
| GAGCTTCTTAACAGCCAAAG+AGG | 0.591164 | 2.1:-47593521 | MS.gene85380:CDS |
| ACATTGCTAGGAGTTCTCCC+TGG | 0.599976 | 2.1:+47592616 | None:intergenic |
| TCTTCATCAACATCCATAAG+GGG | 0.601384 | 2.1:-47595022 | MS.gene85380:intron |
| TTTCTATCAGAGAGCTCCAA+AGG | 0.602700 | 2.1:+47591797 | None:intergenic |
| GCGTGACAGAATTCGTATGA+TGG | 0.603215 | 2.1:-47594352 | MS.gene85380:intron |
| TCCGAGAAGAAGGTTCAACC+AGG | 0.604600 | 2.1:-47592634 | MS.gene85380:CDS |
| CTCAACAACAACATTTGTCG+TGG | 0.606883 | 2.1:+47593188 | None:intergenic |
| GCCTTTGAGGAAATGTATGT+GGG | 0.608477 | 2.1:+47593331 | None:intergenic |
| ACCCTTAAGCCCGAGTGATG+AGG | 0.609390 | 2.1:-47593456 | MS.gene85380:CDS |
| ACATACTGAAACTGGAACTG+AGG | 0.613923 | 2.1:-47591595 | MS.gene85380:CDS |
| AAAATTCAGTACCTGAAACC+AGG | 0.621327 | 2.1:+47595149 | None:intergenic |
| CTGTTGCAAGTTTCTTACCA+AGG | 0.628286 | 2.1:+47592051 | None:intergenic |
| TAATTGAATGCAGCTTCCAT+GGG | 0.632045 | 2.1:-47594928 | MS.gene85380:intron |
| GAAGACATGTTTCCACTTGG+GGG | 0.635876 | 2.1:-47594420 | MS.gene85380:CDS |
| TCTGATACAAAACAAACTAG+AGG | 0.637507 | 2.1:-47592674 | MS.gene85380:CDS |
| GAGTATGAAATCAATGACAA+AGG | 0.637828 | 2.1:-47594898 | MS.gene85380:CDS |
| AACCTGAGACCTCATCACTC+GGG | 0.638591 | 2.1:+47593447 | None:intergenic |
| AGGCCTAACTATACCTTAGG+GGG | 0.643124 | 2.1:+47592562 | None:intergenic |
| AACAGAGATGAAAATTCTGG+AGG | 0.647018 | 2.1:-47591510 | MS.gene85380:CDS |
| AGGGCTCAACTCCAATTGCA+CGG | 0.653427 | 2.1:+47591985 | None:intergenic |
| CAGGCCTAACTATACCTTAG+GGG | 0.667223 | 2.1:+47592561 | None:intergenic |
| CGTCACGAAGGCTAGTAATG+GGG | 0.684087 | 2.1:+47594634 | None:intergenic |
| CCGAGAAGAAGGTTCAACCA+GGG | 0.684770 | 2.1:-47592633 | MS.gene85380:CDS |
| AATATCATTCAATTTGCACG+TGG | 0.702829 | 2.1:-47592811 | MS.gene85380:CDS |
| ATGTTGATGAAGAAAATGGA+AGG | 0.724602 | 2.1:+47595032 | None:intergenic |
| TCATTGAACACAGAATCAGG+AGG | 0.760114 | 2.1:-47592103 | MS.gene85380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACATTCATTATTTATTT+CGG | + | chr2.1:47593265-47593284 | None:intergenic | 10.0% |
| !! | TTTATTAACAAAGATATTAA+TGG | + | chr2.1:47594992-47595011 | None:intergenic | 10.0% |
| !!! | AATAAGTTTAAAATAGATTA+TGG | + | chr2.1:47594194-47594213 | None:intergenic | 10.0% |
| !!! | ATTAAAAGTAATTTTTGATT+TGG | - | chr2.1:47593065-47593084 | MS.gene85380:intron | 10.0% |
| !! | ATAGATAATTTGAAGATTAT+AGG | - | chr2.1:47592430-47592449 | MS.gene85380:intron | 15.0% |
| !! | ATCTTCAAATTATCTATTAA+TGG | + | chr2.1:47592427-47592446 | None:intergenic | 15.0% |
| !! | ATGTTTAATAGTTATGAATT+TGG | - | chr2.1:47593287-47593306 | MS.gene85380:CDS | 15.0% |
| !!! | ATTAAACCATTTTATCAAAT+AGG | + | chr2.1:47592102-47592121 | None:intergenic | 15.0% |
| !!! | GTTTTTTTGGTATATTTATA+GGG | + | chr2.1:47594679-47594698 | None:intergenic | 15.0% |
| !!! | TTAAACCATTTTATCAAATA+GGG | + | chr2.1:47592101-47592120 | None:intergenic | 15.0% |
| !! | AAATTATTACCAACATTTAC+CGG | + | chr2.1:47591843-47591862 | None:intergenic | 20.0% |
| !! | AATACAAACAAATGTATTGT+TGG | - | chr2.1:47592724-47592743 | MS.gene85380:CDS | 20.0% |
| !! | ATACAAACAAATGTATTGTT+GGG | - | chr2.1:47592725-47592744 | MS.gene85380:CDS | 20.0% |
| !! | ATGTACAATTGTTTGTTTAA+TGG | - | chr2.1:47593733-47593752 | MS.gene85380:intron | 20.0% |
| !! | ATTAAAATTAGAGACTTACA+AGG | + | chr2.1:47591778-47591797 | None:intergenic | 20.0% |
| !! | CATTTGTTTGTATTTACTTA+TGG | + | chr2.1:47592718-47592737 | None:intergenic | 20.0% |
| !! | GTCTAACATTAATTAACTTA+TGG | - | chr2.1:47593035-47593054 | MS.gene85380:intron | 20.0% |
| !! | TGAAGATTATAGGATATTAT+AGG | - | chr2.1:47592440-47592459 | MS.gene85380:intron | 20.0% |
| !! | TGTTATAATTGTGCTTAATA+CGG | + | chr2.1:47592865-47592884 | None:intergenic | 20.0% |
| !! | TTAGAAGTAATCTTGTAAAA+TGG | - | chr2.1:47592838-47592857 | MS.gene85380:CDS | 20.0% |
| !!! | ATTGATTTTTATTATAGTGC+TGG | - | chr2.1:47591577-47591596 | MS.gene85380:CDS | 20.0% |
| !!! | CGATTTGATTTTTAAAATTC+AGG | - | chr2.1:47592029-47592048 | MS.gene85380:CDS | 20.0% |
| !!! | CGTTTTTTTGGTATATTTAT+AGG | + | chr2.1:47594680-47594699 | None:intergenic | 20.0% |
| !!! | TTATCCACATTTTCTATTTT+CGG | + | chr2.1:47594929-47594948 | None:intergenic | 20.0% |
| ! | AAGAAATAAAGATCAAGAAG+AGG | - | chr2.1:47594715-47594734 | MS.gene85380:intron | 25.0% |
| ! | AGAAAGTAAAGCGAAAATTA+AGG | - | chr2.1:47594631-47594650 | MS.gene85380:CDS | 25.0% |
| ! | AGTATAATACAAACTTACCA+AGG | + | chr2.1:47592401-47592420 | None:intergenic | 25.0% |
| ! | ATGTATAAGCTATTTGTGTA+AGG | + | chr2.1:47594277-47594296 | None:intergenic | 25.0% |
| ! | ATTAAAAAATGAGAGGCTAA+AGG | - | chr2.1:47592585-47592604 | MS.gene85380:CDS | 25.0% |
| ! | GAAAATAGAAAATGTGGATA+AGG | - | chr2.1:47594928-47594947 | MS.gene85380:intron | 25.0% |
| ! | GAACATACAATATTTGATCA+CGG | + | chr2.1:47592966-47592985 | None:intergenic | 25.0% |
| ! | GTATTACTATGTGTTGTATA+TGG | - | chr2.1:47594950-47594969 | MS.gene85380:intron | 25.0% |
| ! | TAACACCCTATTTGATAAAA+TGG | - | chr2.1:47592093-47592112 | MS.gene85380:CDS | 25.0% |
| ! | TAGGATTACCAAACTATTAT+TGG | - | chr2.1:47592459-47592478 | MS.gene85380:intron | 25.0% |
| ! | TCAAAAAGAAAATCAACATG+TGG | + | chr2.1:47591548-47591567 | None:intergenic | 25.0% |
| ! | TCAAATAAATCAATCCAAAC+AGG | + | chr2.1:47594103-47594122 | None:intergenic | 25.0% |
| ! | TCTTAAACAATGCATACTAA+AGG | - | chr2.1:47592375-47592394 | MS.gene85380:intron | 25.0% |
| ! | TTAAAAAATGAGAGGCTAAA+GGG | - | chr2.1:47592586-47592605 | MS.gene85380:CDS | 25.0% |
| ! | TTAAAATTCAGGATTCTGAA+GGG | - | chr2.1:47592040-47592059 | MS.gene85380:CDS | 25.0% |
| ! | TTACTTTCTTCAATATGTAC+TGG | + | chr2.1:47594620-47594639 | None:intergenic | 25.0% |
| !! | GAAGAATCTTTCTTTTCATT+TGG | + | chr2.1:47594491-47594510 | None:intergenic | 25.0% |
| !! | TATCCACATTTTCTATTTTC+GGG | + | chr2.1:47594928-47594947 | None:intergenic | 25.0% |
| !! | TTTAAAATTCAGGATTCTGA+AGG | - | chr2.1:47592039-47592058 | MS.gene85380:CDS | 25.0% |
| !!! | TAGCCTCTCATTTTTTAATT+GGG | + | chr2.1:47592584-47592603 | None:intergenic | 25.0% |
| !!! | TATCTATGTTACTTTTGAAC+CGG | - | chr2.1:47593005-47593024 | MS.gene85380:intron | 25.0% |
| !!! | TTAAGGTTGATATTACAGAA+AGG | - | chr2.1:47592192-47592211 | MS.gene85380:CDS | 25.0% |
| !!! | TTAGCCTCTCATTTTTTAAT+TGG | + | chr2.1:47592585-47592604 | None:intergenic | 25.0% |
| !!! | TTTGAATCTGTTCGTTTTTT+TGG | + | chr2.1:47594692-47594711 | None:intergenic | 25.0% |
| AACAAATGTATTGTTGGGTA+TGG | - | chr2.1:47592730-47592749 | MS.gene85380:CDS | 30.0% | |
| AACATGATGCAGTAAATATC+TGG | - | chr2.1:47592158-47592177 | MS.gene85380:CDS | 30.0% | |
| AATATCATTCAATTTGCACG+TGG | - | chr2.1:47593831-47593850 | MS.gene85380:intron | 30.0% | |
| ACAGGTTACAACATAGAATT+TGG | + | chr2.1:47591962-47591981 | None:intergenic | 30.0% | |
| AGAACATTGCAGATCAATAT+AGG | - | chr2.1:47593772-47593791 | MS.gene85380:intron | 30.0% | |
| AGAATTTGGTATGACTTATC+TGG | + | chr2.1:47591948-47591967 | None:intergenic | 30.0% | |
| AGAGCTAACCAATAATAGTT+TGG | + | chr2.1:47592470-47592489 | None:intergenic | 30.0% | |
| AGCTCTATAGGATAATAAGT+AGG | - | chr2.1:47592484-47592503 | MS.gene85380:intron | 30.0% | |
| CAAAAAGTGAATTCTTACAC+AGG | - | chr2.1:47594418-47594437 | MS.gene85380:CDS | 30.0% | |
| CTTACTTGATACTTTATTGG+AGG | + | chr2.1:47594467-47594486 | None:intergenic | 30.0% | |
| CTTTCTATTGATCAAGCTTA+GGG | + | chr2.1:47592894-47592913 | None:intergenic | 30.0% | |
| GAACATTGCAGATCAATATA+GGG | - | chr2.1:47593773-47593792 | MS.gene85380:intron | 30.0% | |
| GAGTATGAAATCAATGACAA+AGG | - | chr2.1:47591744-47591763 | MS.gene85380:CDS | 30.0% | |
| GATAACAGAGATGAAAATTC+TGG | - | chr2.1:47595129-47595148 | MS.gene85380:intron | 30.0% | |
| GATTTCATATTTGAGCTAGA+AGG | + | chr2.1:47592648-47592667 | None:intergenic | 30.0% | |
| GGACTTACTTGATACTTTAT+TGG | + | chr2.1:47594470-47594489 | None:intergenic | 30.0% | |
| TAAAAATCAAATCGTCACGA+AGG | + | chr2.1:47592023-47592042 | None:intergenic | 30.0% | |
| TATGTTGTAACCTGTTTGTT+CGG | - | chr2.1:47591967-47591986 | MS.gene85380:CDS | 30.0% | |
| TCTGATACAAAACAAACTAG+AGG | - | chr2.1:47593968-47593987 | MS.gene85380:intron | 30.0% | |
| TTCATAGATTACCGATATGT+GGG | - | chr2.1:47592753-47592772 | MS.gene85380:CDS | 30.0% | |
| TTCTTCATCAACATCCATAA+GGG | - | chr2.1:47591619-47591638 | MS.gene85380:intron | 30.0% | |
| TTTCCCGAAAATAGAAAATG+TGG | - | chr2.1:47594922-47594941 | MS.gene85380:intron | 30.0% | |
| TTTCTCAAATGGTAACTCAT+TGG | + | chr2.1:47593871-47593890 | None:intergenic | 30.0% | |
| TTTCTTCATCAACATCCATA+AGG | - | chr2.1:47591618-47591637 | MS.gene85380:intron | 30.0% | |
| ! | ATCATTTTCCTAACATTGCT+AGG | + | chr2.1:47594041-47594060 | None:intergenic | 30.0% |
| ! | ATGGATGTTGATGAAGAAAA+TGG | + | chr2.1:47591617-47591636 | None:intergenic | 30.0% |
| ! | ATGTTGATGAAGAAAATGGA+AGG | + | chr2.1:47591613-47591632 | None:intergenic | 30.0% |
| ! | ATTTTCCAATGTCTTCTTGT+TGG | + | chr2.1:47593715-47593734 | None:intergenic | 30.0% |
| ! | TATTATAGTGCTGGAATTCA+TGG | - | chr2.1:47591586-47591605 | MS.gene85380:CDS | 30.0% |
| ! | TTGATGATAACCTGATCAAA+TGG | + | chr2.1:47595159-47595178 | None:intergenic | 30.0% |
| ! | TTTGAAACAGTTACAGTTTC+AGG | - | chr2.1:47594815-47594834 | MS.gene85380:intron | 30.0% |
| !! | CTATTATTGGTTAGCTCTAT+AGG | - | chr2.1:47592472-47592491 | MS.gene85380:intron | 30.0% |
| !! | GATATTACAGAAAGGTGTTT+GGG | - | chr2.1:47592200-47592219 | MS.gene85380:CDS | 30.0% |
| !! | TGATATTACAGAAAGGTGTT+TGG | - | chr2.1:47592199-47592218 | MS.gene85380:CDS | 30.0% |
| !!! | GAATTCACTTTTTGAAACAC+TGG | + | chr2.1:47594412-47594431 | None:intergenic | 30.0% |
| AAAATTCAGTACCTGAAACC+AGG | + | chr2.1:47591496-47591515 | None:intergenic | 35.0% | |
| AAATACTAACCATCTAAGCC+AGG | - | chr2.1:47594865-47594884 | MS.gene85380:intron | 35.0% | |
| AACAGAGATGAAAATTCTGG+AGG | - | chr2.1:47595132-47595151 | MS.gene85380:intron | 35.0% | |
| AACCAACAGGACTTTGTAAT+TGG | + | chr2.1:47593413-47593432 | None:intergenic | 35.0% | |
| AATGTACCACATACTGAAAC+TGG | - | chr2.1:47595039-47595058 | MS.gene85380:CDS | 35.0% | |
| ACCAACAGGACTTTGTAATT+GGG | + | chr2.1:47593412-47593431 | None:intergenic | 35.0% | |
| ACTTGATACTTTATTGGAGG+TGG | + | chr2.1:47594464-47594483 | None:intergenic | 35.0% | |
| AGCATATAGTAGAGATCAAG+AGG | - | chr2.1:47594754-47594773 | MS.gene85380:intron | 35.0% | |
| AGTTGACAATGGGAAGAATA+AGG | + | chr2.1:47591675-47591694 | None:intergenic | 35.0% | |
| ATAATTGAATGCAGCTTCCA+TGG | - | chr2.1:47591713-47591732 | MS.gene85380:intron | 35.0% | |
| ATATTTACTGCTTGTGACAC+AGG | + | chr2.1:47593816-47593835 | None:intergenic | 35.0% | |
| ATCATACTGTACATGCACAA+GGG | + | chr2.1:47594376-47594395 | None:intergenic | 35.0% | |
| CAAAACAAACTAGAGGATGA+TGG | - | chr2.1:47593975-47593994 | MS.gene85380:intron | 35.0% | |
| CAATATTTGATCACGGAGTT+CGG | + | chr2.1:47592959-47592978 | None:intergenic | 35.0% | |
| CATATTTGAGCTAGAAGGAA+AGG | + | chr2.1:47592643-47592662 | None:intergenic | 35.0% | |
| CCACTTAAGAAGTTGACAAT+GGG | + | chr2.1:47591685-47591704 | None:intergenic | 35.0% | |
| CCTAAGCTTGATCAATAGAA+AGG | - | chr2.1:47592892-47592911 | MS.gene85380:intron | 35.0% | |
| CCTTTCTATTGATCAAGCTT+AGG | + | chr2.1:47592895-47592914 | None:intergenic | 35.0% | |
| CTAAATGTTAGTGTTGTGTC+CGG | - | chr2.1:47593654-47593673 | MS.gene85380:intron | 35.0% | |
| GAATTCTTACACAGGATATG+AGG | - | chr2.1:47594426-47594445 | MS.gene85380:CDS | 35.0% | |
| GAGCCCAATTAAAAAATGAG+AGG | - | chr2.1:47592578-47592597 | MS.gene85380:CDS | 35.0% | |
| GGAAATCCAAACTTCTTTGA+TGG | + | chr2.1:47594907-47594926 | None:intergenic | 35.0% | |
| GTTCATAGATTACCGATATG+TGG | - | chr2.1:47592752-47592771 | MS.gene85380:CDS | 35.0% | |
| TAAGCACAAGTAAGGATGTT+TGG | - | chr2.1:47594138-47594157 | MS.gene85380:intron | 35.0% | |
| TAATTGAATGCAGCTTCCAT+GGG | - | chr2.1:47591714-47591733 | MS.gene85380:intron | 35.0% | |
| TACTGACATAAGCACAAGTA+AGG | - | chr2.1:47594130-47594149 | MS.gene85380:intron | 35.0% | |
| TCATACCAACAAGAAGACAT+TGG | - | chr2.1:47593707-47593726 | MS.gene85380:intron | 35.0% | |
| TCTTCAATATTCCGAGAAGA+AGG | - | chr2.1:47593998-47594017 | MS.gene85380:intron | 35.0% | |
| TCTTCATCAACATCCATAAG+GGG | - | chr2.1:47591620-47591639 | MS.gene85380:intron | 35.0% | |
| TGTAACAAAAGAGCCAATGT+CGG | - | chr2.1:47591884-47591903 | MS.gene85380:CDS | 35.0% | |
| TTCACATAAGCTAGCTATCA+TGG | + | chr2.1:47594229-47594248 | None:intergenic | 35.0% | |
| TTGTCATTGGATAAACCAAC+AGG | + | chr2.1:47593426-47593445 | None:intergenic | 35.0% | |
| ! | ACATTTTATCCTGGCTTAGA+TGG | + | chr2.1:47594877-47594896 | None:intergenic | 35.0% |
| ! | GTTATCATCAGTAGAAGTAC+TGG | + | chr2.1:47595115-47595134 | None:intergenic | 35.0% |
| ! | TTCTTCTGAGAGTCAACATT+TGG | - | chr2.1:47594505-47594524 | MS.gene85380:intron | 35.0% |
| !! | TTCATACTCCATTTTTCCCA+TGG | + | chr2.1:47591733-47591752 | None:intergenic | 35.0% |
| AAACAACCTCAGACAGTTAC+TGG | - | chr2.1:47593888-47593907 | MS.gene85380:intron | 40.0% | |
| AACAGGCCTAACTATACCTT+AGG | + | chr2.1:47594086-47594105 | None:intergenic | 40.0% | |
| AAGGTATAGTTAGGCCTGTT+TGG | - | chr2.1:47594086-47594105 | MS.gene85380:intron | 40.0% | |
| AATTAAGGACACCGTGCAAT+TGG | - | chr2.1:47594646-47594665 | MS.gene85380:intron | 40.0% | |
| AATTGGGCTCACATAAGACT+TGG | + | chr2.1:47592568-47592587 | None:intergenic | 40.0% | |
| ACAATGCATACTAAAGGCCT+TGG | - | chr2.1:47592381-47592400 | MS.gene85380:intron | 40.0% | |
| ACAGGCCTAACTATACCTTA+GGG | + | chr2.1:47594085-47594104 | None:intergenic | 40.0% | |
| ACATACTGAAACTGGAACTG+AGG | - | chr2.1:47595047-47595066 | MS.gene85380:CDS | 40.0% | |
| AGACAACAAACCGAACAAAC+AGG | + | chr2.1:47591980-47591999 | None:intergenic | 40.0% | |
| AGGAGGCTTCTTACAAGATA+GGG | - | chr2.1:47594556-47594575 | MS.gene85380:intron | 40.0% | |
| AGTTTCAGGAAACATGCCTT+TGG | - | chr2.1:47594829-47594848 | MS.gene85380:intron | 40.0% | |
| ATCATTCAATTTGCACGTGG+AGG | - | chr2.1:47593834-47593853 | MS.gene85380:intron | 40.0% | |
| CACTAACATTTAGGCATCAG+TGG | + | chr2.1:47593647-47593666 | None:intergenic | 40.0% | |
| CCAACAATACCTCAGAAAAG+CGG | + | chr2.1:47592545-47592564 | None:intergenic | 40.0% | |
| CCCATTGTCAACTTCTTAAG+TGG | - | chr2.1:47591682-47591701 | MS.gene85380:intron | 40.0% | |
| CGGACACAACACTAACATTT+AGG | + | chr2.1:47593656-47593675 | None:intergenic | 40.0% | |
| CGTGGAACTTTCTTTGTCAT+TGG | + | chr2.1:47593439-47593458 | None:intergenic | 40.0% | |
| CTCAACAACAACATTTGTCG+TGG | + | chr2.1:47593457-47593476 | None:intergenic | 40.0% | |
| CTCAAGCCATCAAAGAAGTT+TGG | - | chr2.1:47594898-47594917 | MS.gene85380:CDS | 40.0% | |
| CTGTTGCAAGTTTCTTACCA+AGG | + | chr2.1:47594594-47594613 | None:intergenic | 40.0% | |
| CTTGGTAAGAAACTTGCAAC+AGG | - | chr2.1:47594592-47594611 | MS.gene85380:CDS | 40.0% | |
| GAACAATAGCATACCCCTTA+TGG | + | chr2.1:47591636-47591655 | None:intergenic | 40.0% | |
| GATCATACTGTACATGCACA+AGG | + | chr2.1:47594377-47594396 | None:intergenic | 40.0% | |
| GATTGATGTTCGTGTCATGT+CGG | + | chr2.1:47593604-47593623 | None:intergenic | 40.0% | |
| GCCACTTAAGAAGTTGACAA+TGG | + | chr2.1:47591686-47591705 | None:intergenic | 40.0% | |
| GGTGATGATTCTTGAGAAGA+TGG | + | chr2.1:47593360-47593379 | None:intergenic | 40.0% | |
| GTCTTACATCTATCCGACAT+TGG | + | chr2.1:47591900-47591919 | None:intergenic | 40.0% | |
| TAGCTATCATGGAGAGCTTA+TGG | + | chr2.1:47594218-47594237 | None:intergenic | 40.0% | |
| TCAAATGGTAACTCATTGGC+AGG | + | chr2.1:47593867-47593886 | None:intergenic | 40.0% | |
| TCAGTTCCAGTTTCAGTATG+TGG | + | chr2.1:47595048-47595067 | None:intergenic | 40.0% | |
| TCATTGAACACAGAATCAGG+AGG | - | chr2.1:47594539-47594558 | MS.gene85380:intron | 40.0% | |
| TCCCAATTACAAAGTCCTGT+TGG | - | chr2.1:47593408-47593427 | MS.gene85380:intron | 40.0% | |
| TCCCACATACATTTCCTCAA+AGG | - | chr2.1:47593310-47593329 | MS.gene85380:CDS | 40.0% | |
| TGAGGTGAGCAAGTATGAAA+AGG | - | chr2.1:47595065-47595084 | MS.gene85380:intron | 40.0% | |
| TGATGCAGTAAATATCTGGC+AGG | - | chr2.1:47592162-47592181 | MS.gene85380:CDS | 40.0% | |
| TGTCTGTGTTTGTGCTTCAT+AGG | - | chr2.1:47593677-47593696 | MS.gene85380:intron | 40.0% | |
| TTAATGTTAGACCAGCAAGC+CGG | + | chr2.1:47593027-47593046 | None:intergenic | 40.0% | |
| TTTCTATCAGAGAGCTCCAA+AGG | + | chr2.1:47594848-47594867 | None:intergenic | 40.0% | |
| ! | AGCCTTTGAGGAAATGTATG+TGG | + | chr2.1:47593315-47593334 | None:intergenic | 40.0% |
| ! | ATCTGGCAGGAGTACATTTA+AGG | - | chr2.1:47592175-47592194 | MS.gene85380:CDS | 40.0% |
| ! | GATGGAGCACTTAAAACATC+AGG | + | chr2.1:47593342-47593361 | None:intergenic | 40.0% |
| ! | GCCTTTGAGGAAATGTATGT+GGG | + | chr2.1:47593314-47593333 | None:intergenic | 40.0% |
| ! | GGCTTGAGTACATTTTATCC+TGG | + | chr2.1:47594886-47594905 | None:intergenic | 40.0% |
| ! | TCGTGTTGAAGATGTTGCTT+TGG | + | chr2.1:47593381-47593400 | None:intergenic | 40.0% |
| !! | AACCTATGTAGCATTGACAC+CGG | - | chr2.1:47591821-47591840 | MS.gene85380:CDS | 40.0% |
| !! | GTCTGAGGTTGTTTCTCAAA+TGG | + | chr2.1:47593882-47593901 | None:intergenic | 40.0% |
| !! | TACTTCTAAAGCATACCGCA+GGG | + | chr2.1:47592827-47592846 | None:intergenic | 40.0% |
| !! | TTACTTCTAAAGCATACCGC+AGG | + | chr2.1:47592828-47592847 | None:intergenic | 40.0% |
| !!! | TGACACAGGTTTTGTTGATG+AGG | + | chr2.1:47593802-47593821 | None:intergenic | 40.0% |
| !!! | TTTTGAAAGTGTTCCCCCTA+AGG | - | chr2.1:47594067-47594086 | MS.gene85380:intron | 40.0% |
| AAACCGCTCTACAGTTAGAG+AGG | - | chr2.1:47592920-47592939 | MS.gene85380:intron | 45.0% | |
| AAACCTGAGACCTCATCACT+CGG | + | chr2.1:47593199-47593218 | None:intergenic | 45.0% | |
| ACATCAGGAGAAAGCCTTTG+AGG | + | chr2.1:47593327-47593346 | None:intergenic | 45.0% | |
| AGGCCTAACTATACCTTAGG+GGG | + | chr2.1:47594083-47594102 | None:intergenic | 45.0% | |
| ATCGTCACGAAGGCTAGTAA+TGG | + | chr2.1:47592013-47592032 | None:intergenic | 45.0% | |
| CAGGAGGCTTCTTACAAGAT+AGG | - | chr2.1:47594555-47594574 | MS.gene85380:intron | 45.0% | |
| CAGGCCTAACTATACCTTAG+GGG | + | chr2.1:47594084-47594103 | None:intergenic | 45.0% | |
| CGGTCATTGAACACAGAATC+AGG | - | chr2.1:47594536-47594555 | MS.gene85380:intron | 45.0% | |
| CGGTGCAACATACTTGAGAT+TGG | + | chr2.1:47592525-47592544 | None:intergenic | 45.0% | |
| CTACCTCTCTAACTGTAGAG+CGG | + | chr2.1:47592926-47592945 | None:intergenic | 45.0% | |
| GAAGACATGTTTCCACTTGG+GGG | - | chr2.1:47592222-47592241 | MS.gene85380:intron | 45.0% | |
| GAGCTTCTTAACAGCCAAAG+AGG | - | chr2.1:47593121-47593140 | MS.gene85380:intron | 45.0% | |
| GCGTGACAGAATTCGTATGA+TGG | - | chr2.1:47592290-47592309 | MS.gene85380:intron | 45.0% | |
| GGAAGACATGTTTCCACTTG+GGG | - | chr2.1:47592221-47592240 | MS.gene85380:intron | 45.0% | |
| GGAGAACTCCTAGCAATGTT+AGG | - | chr2.1:47594030-47594049 | MS.gene85380:intron | 45.0% | |
| GGGAAGACATGTTTCCACTT+GGG | - | chr2.1:47592220-47592239 | MS.gene85380:intron | 45.0% | |
| GTGCCTTTAATCCGATGTGT+CGG | + | chr2.1:47593553-47593572 | None:intergenic | 45.0% | |
| GTTAGAGAGGTAGGCAGAAT+TGG | - | chr2.1:47592933-47592952 | MS.gene85380:intron | 45.0% | |
| GTTCCCCCTAAGGTATAGTT+AGG | - | chr2.1:47594077-47594096 | MS.gene85380:intron | 45.0% | |
| TCGTCACGAAGGCTAGTAAT+GGG | + | chr2.1:47592012-47592031 | None:intergenic | 45.0% | |
| TCTGAACCAGTAACTGTCTG+AGG | + | chr2.1:47593897-47593916 | None:intergenic | 45.0% | |
| TGAAGCACAAACACAGACAC+CGG | + | chr2.1:47593676-47593695 | None:intergenic | 45.0% | |
| TGCAGCTTCCATGGGAAAAA+TGG | - | chr2.1:47591722-47591741 | MS.gene85380:CDS | 45.0% | |
| TGGGAAGACATGTTTCCACT+TGG | - | chr2.1:47592219-47592238 | MS.gene85380:intron | 45.0% | |
| ! | AGGATGTTTGGAACAGCTCA+TGG | - | chr2.1:47594150-47594169 | MS.gene85380:intron | 45.0% |
| ! | CACAACACTTGGGCATTGTT+TGG | + | chr2.1:47594353-47594372 | None:intergenic | 45.0% |
| ! | GAGCAAGTATGAAAAGGTGC+AGG | - | chr2.1:47595071-47595090 | MS.gene85380:intron | 45.0% |
| ! | GCATTGACACCGGTAAATGT+TGG | - | chr2.1:47591831-47591850 | MS.gene85380:CDS | 45.0% |
| ! | GTCAACATTTGGAGCAGGAT+CGG | - | chr2.1:47594516-47594535 | MS.gene85380:intron | 45.0% |
| ! | TACCGGTGTCAATGCTACAT+AGG | + | chr2.1:47591826-47591845 | None:intergenic | 45.0% |
| ! | TGAGAGTCAACATTTGGAGC+AGG | - | chr2.1:47594511-47594530 | MS.gene85380:intron | 45.0% |
| ! | TTCTGGAGGACCATTTGATC+AGG | - | chr2.1:47595146-47595165 | MS.gene85380:intron | 45.0% |
| !! | TAGGGTGAAAAGTGCTTCCT+TGG | - | chr2.1:47594574-47594593 | MS.gene85380:intron | 45.0% |
| !! | TATGTTGCACCGCTTTTCTG+AGG | - | chr2.1:47592533-47592552 | MS.gene85380:intron | 45.0% |
| !! | TCTATGTAGCACCGACACAT+CGG | - | chr2.1:47593539-47593558 | MS.gene85380:CDS | 45.0% |
| !! | TGTCACTTTCTGCACCTCTT+TGG | + | chr2.1:47593138-47593157 | None:intergenic | 45.0% |
| !!! | CCGCTTTTCTGAGGTATTGT+TGG | - | chr2.1:47592542-47592561 | MS.gene85380:intron | 45.0% |
| !!! | TTACTTTTGAACCGGCTTGC+TGG | - | chr2.1:47593013-47593032 | MS.gene85380:intron | 45.0% |
| AACCTGAGACCTCATCACTC+GGG | + | chr2.1:47593198-47593217 | None:intergenic | 50.0% | |
| ACATTGCTAGGAGTTCTCCC+TGG | + | chr2.1:47594029-47594048 | None:intergenic | 50.0% | |
| ACCTCATCACTCGGGCTTAA+GGG | + | chr2.1:47593190-47593209 | None:intergenic | 50.0% | |
| AGGGCTCAACTCCAATTGCA+CGG | + | chr2.1:47594660-47594679 | None:intergenic | 50.0% | |
| CCAGGAACAATCCTGGTTTC+AGG | - | chr2.1:47591482-47591501 | MS.gene85380:CDS | 50.0% | |
| CCCTGGTTGAACCTTCTTCT+CGG | + | chr2.1:47594012-47594031 | None:intergenic | 50.0% | |
| CCGAGAAGAAGGTTCAACCA+GGG | - | chr2.1:47594009-47594028 | MS.gene85380:intron | 50.0% | |
| CCTGAAACCAGGATTGTTCC+TGG | + | chr2.1:47591485-47591504 | None:intergenic | 50.0% | |
| CGCTCTACAGTTAGAGAGGT+AGG | - | chr2.1:47592924-47592943 | MS.gene85380:intron | 50.0% | |
| CGTCACGAAGGCTAGTAATG+GGG | + | chr2.1:47592011-47592030 | None:intergenic | 50.0% | |
| CTCAAGTGGGACTATGACTG+GGG | - | chr2.1:47592783-47592802 | MS.gene85380:CDS | 50.0% | |
| GCTCAAGTGGGACTATGACT+GGG | - | chr2.1:47592782-47592801 | MS.gene85380:CDS | 50.0% | |
| GGGAATGAAATATCGCGTGC+AGG | - | chr2.1:47592060-47592079 | MS.gene85380:CDS | 50.0% | |
| TCCGAGAAGAAGGTTCAACC+AGG | - | chr2.1:47594008-47594027 | MS.gene85380:intron | 50.0% | |
| TGAGCAAGCTGCCCACATAT+CGG | + | chr2.1:47592767-47592786 | None:intergenic | 50.0% | |
| TGCTCAAGTGGGACTATGAC+TGG | - | chr2.1:47592781-47592800 | MS.gene85380:CDS | 50.0% | |
| ! | ATGCACAAGGGCACAACACT+TGG | + | chr2.1:47594364-47594383 | None:intergenic | 50.0% |
| ! | GCACCGACACATCGGATTAA+AGG | - | chr2.1:47593547-47593566 | MS.gene85380:CDS | 50.0% |
| ! | TCAACTCTCGTGTCTGGCTT+AGG | - | chr2.1:47592613-47592632 | MS.gene85380:CDS | 50.0% |
| ! | TCGGATTAAAGGCACGTGTC+TGG | - | chr2.1:47593558-47593577 | MS.gene85380:intron | 50.0% |
| ! | TGCACAAGGGCACAACACTT+GGG | + | chr2.1:47594363-47594382 | None:intergenic | 50.0% |
| AAGTGGGACTATGACTGGGG+TGG | - | chr2.1:47592786-47592805 | MS.gene85380:CDS | 55.0% | |
| ACCCTTAAGCCCGAGTGATG+AGG | - | chr2.1:47593186-47593205 | MS.gene85380:CDS | 55.0% | |
| AGTGGGACTATGACTGGGGT+GGG | - | chr2.1:47592787-47592806 | MS.gene85380:CDS | 55.0% | |
| GACATGTTTCCACTTGGGGG+AGG | - | chr2.1:47592225-47592244 | MS.gene85380:intron | 55.0% | |
| GACCTCATCACTCGGGCTTA+AGG | + | chr2.1:47593191-47593210 | None:intergenic | 55.0% | |
| GGCTTGTCAACTCTCGTGTC+TGG | - | chr2.1:47592607-47592626 | MS.gene85380:CDS | 55.0% | |
| ! | ATGTGGGCAGCTTGCTCAAG+TGG | - | chr2.1:47592769-47592788 | MS.gene85380:CDS | 55.0% |
| ! | TGTGGGCAGCTTGCTCAAGT+GGG | - | chr2.1:47592770-47592789 | MS.gene85380:CDS | 55.0% |
| AGCCCGAGTGATGAGGTCTC+AGG | - | chr2.1:47593193-47593212 | MS.gene85380:CDS | 60.0% | |
| GTGGGACTATGACTGGGGTG+GGG | - | chr2.1:47592788-47592807 | MS.gene85380:CDS | 60.0% | |
| TGCAACTGTCCTCCCCCAAG+TGG | + | chr2.1:47592237-47592256 | None:intergenic | 60.0% | |
| TGGGACTATGACTGGGGTGG+GGG | - | chr2.1:47592789-47592808 | MS.gene85380:CDS | 60.0% | |
| ACTATGACTGGGGTGGGGGG+GGG | - | chr2.1:47592793-47592812 | MS.gene85380:CDS | 65.0% | |
| GACTATGACTGGGGTGGGGG+GGG | - | chr2.1:47592792-47592811 | MS.gene85380:CDS | 65.0% | |
| GGACTATGACTGGGGTGGGG+GGG | - | chr2.1:47592791-47592810 | MS.gene85380:CDS | 65.0% | |
| GGGACTATGACTGGGGTGGG+GGG | - | chr2.1:47592790-47592809 | MS.gene85380:CDS | 65.0% | |
| CTATGACTGGGGTGGGGGGG+GGG | - | chr2.1:47592794-47592813 | MS.gene85380:CDS | 70.0% | |
| TATGACTGGGGTGGGGGGGG+GGG | - | chr2.1:47592795-47592814 | MS.gene85380:CDS | 70.0% | |
| GGGGGGGGGCAAAGTCCCTG+CGG | - | chr2.1:47592809-47592828 | MS.gene85380:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 47591479 | 47595185 | 47591479 | ID=MS.gene85380 |
| chr2.1 | mRNA | 47591479 | 47595185 | 47591479 | ID=MS.gene85380.t1;Parent=MS.gene85380 |
| chr2.1 | exon | 47595161 | 47595185 | 47595161 | ID=MS.gene85380.t1.exon1;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47595161 | 47595185 | 47595161 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47595023 | 47595070 | 47595023 | ID=MS.gene85380.t1.exon2;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47595023 | 47595070 | 47595023 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47594886 | 47594937 | 47594886 | ID=MS.gene85380.t1.exon3;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47594886 | 47594937 | 47594886 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47594583 | 47594656 | 47594583 | ID=MS.gene85380.t1.exon4;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47594583 | 47594656 | 47594583 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47594353 | 47594480 | 47594353 | ID=MS.gene85380.t1.exon5;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47594353 | 47594480 | 47594353 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47593450 | 47593573 | 47593450 | ID=MS.gene85380.t1.exon6;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47593450 | 47593573 | 47593450 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47593158 | 47593366 | 47593158 | ID=MS.gene85380.t1.exon7;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47593158 | 47593366 | 47593158 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47592576 | 47592890 | 47592576 | ID=MS.gene85380.t1.exon8;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47592576 | 47592890 | 47592576 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47591715 | 47592224 | 47591715 | ID=MS.gene85380.t1.exon9;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47591715 | 47592224 | 47591715 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| chr2.1 | exon | 47591479 | 47591625 | 47591479 | ID=MS.gene85380.t1.exon10;Parent=MS.gene85380.t1 |
| chr2.1 | CDS | 47591479 | 47591625 | 47591479 | ID=cds.MS.gene85380.t1;Parent=MS.gene85380.t1 |
| Gene Sequence |
| Protein sequence |
