Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87687.t1 | XP_013449253.1 | 98.3 | 411 | 7 | 0 | 1 | 411 | 81 | 491 | 2.00E-221 | 778.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87687.t1 | Q9LZV4 | 72.2 | 414 | 108 | 3 | 2 | 409 | 82 | 494 | 8.5e-168 | 591.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87687.t1 | A0A072UBQ7 | 98.3 | 411 | 7 | 0 | 1 | 411 | 81 | 491 | 1.5e-221 | 778.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene87687 | 0.873884 | 1.04E-67 | -1.69E-46 |
| MS.gene049217 | MS.gene87687 | 0.856344 | 3.43E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene87687 | 0.828259 | 9.93E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene87687 | 0.818743 | 1.67E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene87687 | 0.81837 | 2.03E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene87687 | 0.856195 | 3.79E-62 | -1.69E-46 |
| MS.gene049356 | MS.gene87687 | 0.815961 | 7.07E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene87687 | 0.838239 | 3.24E-57 | -1.69E-46 |
| MS.gene049425 | MS.gene87687 | -0.804678 | 1.92E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene87687 | 0.866222 | 3.34E-65 | -1.69E-46 |
| MS.gene049491 | MS.gene87687 | 0.805254 | 1.46E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene87687 | 0.866777 | 2.22E-65 | -1.69E-46 |
| MS.gene049661 | MS.gene87687 | 0.890463 | 9.63E-74 | -1.69E-46 |
| MS.gene049662 | MS.gene87687 | 0.883293 | 5.07E-71 | -1.69E-46 |
| MS.gene049760 | MS.gene87687 | 0.827688 | 1.36E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene87687 | 0.881155 | 3.04E-70 | -1.69E-46 |
| MS.gene050076 | MS.gene87687 | 0.841398 | 4.87E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene87687 | 0.814915 | 1.21E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene87687 | 0.814608 | 1.41E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene87687 | 0.817834 | 2.69E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene87687 | 0.850129 | 2.07E-60 | -1.69E-46 |
| MS.gene050432 | MS.gene87687 | 0.860082 | 2.65E-63 | -1.69E-46 |
| MS.gene050464 | MS.gene87687 | 0.817114 | 3.90E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene87687 | 0.840438 | 8.70E-58 | -1.69E-46 |
| MS.gene050538 | MS.gene87687 | 0.836538 | 8.83E-57 | -1.69E-46 |
| MS.gene05053 | MS.gene87687 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene87687 | 0.862579 | 4.59E-64 | -1.69E-46 |
| MS.gene050670 | MS.gene87687 | 0.862405 | 5.19E-64 | -1.69E-46 |
| MS.gene050686 | MS.gene87687 | 0.814548 | 1.46E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene87687 | 0.845427 | 4.09E-59 | -1.69E-46 |
| MS.gene050767 | MS.gene87687 | 0.851102 | 1.10E-60 | -1.69E-46 |
| MS.gene050770 | MS.gene87687 | 0.854407 | 1.26E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene87687 | 0.875767 | 2.38E-68 | -1.69E-46 |
| MS.gene05080 | MS.gene87687 | 0.807085 | 6.00E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene87687 | 0.810234 | 1.28E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene87687 | 0.838582 | 2.64E-57 | -1.69E-46 |
| MS.gene05100 | MS.gene87687 | 0.810279 | 1.25E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene87687 | 0.828197 | 1.03E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene87687 | 0.884603 | 1.67E-71 | -1.69E-46 |
| MS.gene051167 | MS.gene87687 | -0.801801 | 7.58E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene87687 | 0.828602 | 8.21E-55 | -1.69E-46 |
| MS.gene051255 | MS.gene87687 | 0.806177 | 9.34E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene87687 | 0.862953 | 3.52E-64 | -1.69E-46 |
| MS.gene051471 | MS.gene87687 | 0.821484 | 3.94E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene87687 | 0.870588 | 1.30E-66 | -1.69E-46 |
| MS.gene051692 | MS.gene87687 | 0.836819 | 7.48E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene87687 | 0.837963 | 3.81E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene87687 | 0.805682 | 1.19E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene87687 | 0.869653 | 2.63E-66 | -1.69E-46 |
| MS.gene051877 | MS.gene87687 | 0.844733 | 6.30E-59 | -1.69E-46 |
| MS.gene052078 | MS.gene87687 | 0.858108 | 1.03E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene87687 | 0.845095 | 5.03E-59 | -1.69E-46 |
| MS.gene052253 | MS.gene87687 | 0.819458 | 1.15E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene87687 | 0.840403 | 8.88E-58 | -1.69E-46 |
| MS.gene052290 | MS.gene87687 | 0.832225 | 1.07E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene87687 | 0.875126 | 3.94E-68 | -1.69E-46 |
| MS.gene052322 | MS.gene87687 | 0.857599 | 1.46E-62 | -1.69E-46 |
| MS.gene052326 | MS.gene87687 | 0.814005 | 1.92E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene87687 | 0.825593 | 4.31E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene87687 | 0.865816 | 4.49E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene87687 | 0.880642 | 4.64E-70 | -1.69E-46 |
| MS.gene052481 | MS.gene87687 | 0.843568 | 1.29E-58 | -1.69E-46 |
| MS.gene052484 | MS.gene87687 | 0.85647 | 3.15E-62 | -1.69E-46 |
| MS.gene052485 | MS.gene87687 | 0.849864 | 2.46E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene87687 | 0.819202 | 1.31E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene87687 | 0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene052508 | MS.gene87687 | 0.800686 | 1.28E-48 | -1.69E-46 |
| MS.gene052510 | MS.gene87687 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene87687 | 0.856159 | 3.89E-62 | -1.69E-46 |
| MS.gene052870 | MS.gene87687 | 0.810507 | 1.11E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene87687 | 0.810093 | 1.37E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene87687 | 0.808939 | 2.42E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene87687 | 0.813784 | 2.15E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene87687 | 0.865313 | 6.47E-65 | -1.69E-46 |
| MS.gene053018 | MS.gene87687 | 0.803073 | 4.15E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene87687 | 0.85802 | 1.10E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene87687 | 0.860478 | 2.01E-63 | -1.69E-46 |
| MS.gene053107 | MS.gene87687 | 0.814046 | 1.88E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene87687 | 0.843344 | 1.48E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene87687 | 0.846112 | 2.66E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene87687 | 0.852543 | 4.31E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene87687 | 0.836715 | 7.95E-57 | -1.69E-46 |
| MS.gene053322 | MS.gene87687 | 0.880217 | 6.58E-70 | -1.69E-46 |
| MS.gene053384 | MS.gene87687 | 0.807539 | 4.81E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene87687 | 0.813424 | 2.58E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene87687 | 0.826538 | 2.57E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene87687 | 0.84298 | 1.86E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene87687 | 0.855912 | 4.59E-62 | -1.69E-46 |
| MS.gene053758 | MS.gene87687 | 0.824722 | 6.92E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene87687 | 0.833911 | 4.06E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene87687 | 0.800341 | 1.51E-48 | -1.69E-46 |
| MS.gene053912 | MS.gene87687 | 0.828271 | 9.86E-55 | -1.69E-46 |
| MS.gene053915 | MS.gene87687 | 0.81527 | 1.01E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene87687 | 0.856935 | 2.30E-62 | -1.69E-46 |
| MS.gene054123 | MS.gene87687 | 0.820608 | 6.27E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene87687 | 0.850374 | 1.77E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene87687 | 0.807311 | 5.38E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene87687 | 0.84771 | 9.73E-60 | -1.69E-46 |
| MS.gene054802 | MS.gene87687 | 0.87248 | 3.08E-67 | -1.69E-46 |
| MS.gene054803 | MS.gene87687 | 0.869486 | 2.99E-66 | -1.69E-46 |
| MS.gene054804 | MS.gene87687 | 0.874035 | 9.24E-68 | -1.69E-46 |
| MS.gene054927 | MS.gene87687 | 0.821365 | 4.20E-53 | -1.69E-46 |
| MS.gene054955 | MS.gene87687 | 0.830371 | 3.05E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene87687 | 0.898455 | 5.22E-77 | -1.69E-46 |
| MS.gene055116 | MS.gene87687 | 0.852937 | 3.33E-61 | -1.69E-46 |
| MS.gene055206 | MS.gene87687 | 0.864151 | 1.49E-64 | -1.69E-46 |
| MS.gene055212 | MS.gene87687 | 0.805026 | 1.63E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene87687 | 0.803443 | 3.48E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene87687 | 0.822699 | 2.06E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene87687 | 0.868509 | 6.19E-66 | -1.69E-46 |
| MS.gene055289 | MS.gene87687 | 0.848657 | 5.33E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene87687 | 0.802501 | 5.45E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene87687 | 0.810086 | 1.37E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene87687 | 0.864611 | 1.07E-64 | -1.69E-46 |
| MS.gene055412 | MS.gene87687 | 0.820106 | 8.17E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene87687 | 0.832612 | 8.56E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene87687 | 0.817124 | 3.88E-52 | -1.69E-46 |
| MS.gene055486 | MS.gene87687 | 0.814051 | 1.88E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene87687 | 0.862413 | 5.16E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene87687 | 0.826041 | 3.37E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene87687 | 0.802075 | 6.66E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene87687 | 0.834426 | 3.02E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene87687 | 0.850991 | 1.19E-60 | -1.69E-46 |
| MS.gene055896 | MS.gene87687 | 0.805306 | 1.42E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene87687 | 0.882492 | 9.96E-71 | -1.69E-46 |
| MS.gene055941 | MS.gene87687 | 0.839921 | 1.19E-57 | -1.69E-46 |
| MS.gene05602 | MS.gene87687 | 0.81981 | 9.55E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene87687 | 0.828544 | 8.48E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene87687 | 0.829067 | 6.33E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene87687 | 0.822621 | 2.15E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene87687 | 0.835401 | 1.71E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene87687 | 0.842073 | 3.23E-58 | -1.69E-46 |
| MS.gene056422 | MS.gene87687 | 0.813217 | 2.86E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene87687 | 0.827952 | 1.18E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene87687 | 0.82141 | 4.10E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene87687 | 0.884175 | 2.40E-71 | -1.69E-46 |
| MS.gene056609 | MS.gene87687 | 0.850919 | 1.24E-60 | -1.69E-46 |
| MS.gene056612 | MS.gene87687 | 0.806912 | 6.53E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene87687 | 0.810601 | 1.06E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene87687 | 0.827105 | 1.88E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene87687 | 0.829882 | 4.01E-55 | -1.69E-46 |
| MS.gene056897 | MS.gene87687 | 0.801895 | 7.25E-49 | -1.69E-46 |
| MS.gene056942 | MS.gene87687 | 0.808794 | 2.60E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene87687 | 0.85385 | 1.82E-61 | -1.69E-46 |
| MS.gene05702 | MS.gene87687 | 0.823271 | 1.52E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene87687 | 0.833343 | 5.63E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene87687 | 0.866518 | 2.69E-65 | -1.69E-46 |
| MS.gene057124 | MS.gene87687 | 0.842728 | 2.17E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene87687 | 0.886301 | 3.85E-72 | -1.69E-46 |
| MS.gene057146 | MS.gene87687 | 0.887663 | 1.17E-72 | -1.69E-46 |
| MS.gene057295 | MS.gene87687 | 0.819923 | 9.00E-53 | -1.69E-46 |
| MS.gene057310 | MS.gene87687 | 0.827942 | 1.18E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene87687 | 0.850268 | 1.90E-60 | -1.69E-46 |
| MS.gene05733 | MS.gene87687 | 0.804474 | 2.12E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene87687 | 0.838764 | 2.37E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene87687 | 0.883634 | 3.80E-71 | -1.69E-46 |
| MS.gene057478 | MS.gene87687 | -0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene87687 | 0.812866 | 3.42E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene87687 | 0.824066 | 9.87E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene87687 | 0.832582 | 8.71E-56 | -1.69E-46 |
| MS.gene057926 | MS.gene87687 | 0.830403 | 2.99E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene87687 | 0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene87687 | 0.847486 | 1.12E-59 | -1.69E-46 |
| MS.gene058019 | MS.gene87687 | 0.849145 | 3.90E-60 | -1.69E-46 |
| MS.gene058082 | MS.gene87687 | 0.822307 | 2.54E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene87687 | 0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene87687 | 0.836861 | 7.30E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene87687 | 0.833058 | 6.63E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene87687 | 0.848988 | 4.31E-60 | -1.69E-46 |
| MS.gene058323 | MS.gene87687 | 0.839248 | 1.77E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene87687 | 0.805476 | 1.31E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene87687 | 0.810165 | 1.32E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene87687 | 0.836815 | 7.50E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene87687 | 0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene87687 | 0.891597 | 3.44E-74 | -1.69E-46 |
| MS.gene058723 | MS.gene87687 | 0.834656 | 2.64E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene87687 | 0.803374 | 3.59E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene87687 | 0.814999 | 1.16E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene87687 | 0.817181 | 3.77E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene87687 | 0.845835 | 3.17E-59 | -1.69E-46 |
| MS.gene058840 | MS.gene87687 | -0.807121 | 5.90E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene87687 | 0.85671 | 2.68E-62 | -1.69E-46 |
| MS.gene058993 | MS.gene87687 | 0.830449 | 2.92E-55 | -1.69E-46 |
| MS.gene059029 | MS.gene87687 | 0.823372 | 1.44E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene87687 | 0.82618 | 3.12E-54 | -1.69E-46 |
| MS.gene059141 | MS.gene87687 | 0.802018 | 6.84E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene87687 | 0.816149 | 6.42E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene87687 | 0.864807 | 9.32E-65 | -1.69E-46 |
| MS.gene059366 | MS.gene87687 | 0.826401 | 2.77E-54 | -1.69E-46 |
| MS.gene059368 | MS.gene87687 | 0.802613 | 5.16E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene87687 | 0.809736 | 1.63E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene87687 | 0.808451 | 3.08E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene87687 | 0.885688 | 6.55E-72 | -1.69E-46 |
| MS.gene059597 | MS.gene87687 | 0.825512 | 4.50E-54 | -1.69E-46 |
| MS.gene05959 | MS.gene87687 | 0.814098 | 1.83E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene87687 | 0.85313 | 2.93E-61 | -1.69E-46 |
| MS.gene059677 | MS.gene87687 | 0.818355 | 2.05E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene87687 | 0.882108 | 1.37E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene87687 | 0.868513 | 6.17E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene87687 | 0.867196 | 1.64E-65 | -1.69E-46 |
| MS.gene059711 | MS.gene87687 | 0.845195 | 4.72E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene87687 | 0.837432 | 5.22E-57 | -1.69E-46 |
| MS.gene059894 | MS.gene87687 | 0.810999 | 8.72E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene87687 | 0.872428 | 3.20E-67 | -1.69E-46 |
| MS.gene059960 | MS.gene87687 | 0.884311 | 2.14E-71 | -1.69E-46 |
| MS.gene060193 | MS.gene87687 | 0.819827 | 9.47E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene87687 | 0.80896 | 2.40E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene87687 | 0.837981 | 3.77E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene87687 | 0.809074 | 2.26E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene87687 | 0.896538 | 3.35E-76 | -1.69E-46 |
| MS.gene060818 | MS.gene87687 | 0.890623 | 8.34E-74 | -1.69E-46 |
| MS.gene060835 | MS.gene87687 | 0.851201 | 1.04E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene87687 | 0.843583 | 1.28E-58 | -1.69E-46 |
| MS.gene06090 | MS.gene87687 | 0.800728 | 1.26E-48 | -1.69E-46 |
| MS.gene06092 | MS.gene87687 | 0.848374 | 6.39E-60 | -1.69E-46 |
| MS.gene061041 | MS.gene87687 | 0.871377 | 7.16E-67 | -1.69E-46 |
| MS.gene061049 | MS.gene87687 | 0.834888 | 2.31E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene87687 | -0.832489 | 9.18E-56 | -1.69E-46 |
| MS.gene061134 | MS.gene87687 | 0.808727 | 2.69E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene87687 | 0.82291 | 1.84E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene87687 | 0.821358 | 4.21E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene87687 | 0.889878 | 1.63E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87687.t1 | MTR_7g073530 | 98.297 | 411 | 7 | 0 | 1 | 411 | 81 | 491 | 0.0 | 832 |
| MS.gene87687.t1 | MTR_8g005720 | 78.795 | 415 | 70 | 3 | 1 | 411 | 86 | 486 | 0.0 | 613 |
| MS.gene87687.t1 | MTR_5g053450 | 39.340 | 394 | 198 | 8 | 6 | 392 | 106 | 465 | 3.75e-91 | 286 |
| MS.gene87687.t1 | MTR_7g073560 | 98.305 | 118 | 2 | 0 | 294 | 411 | 21 | 138 | 7.56e-78 | 237 |
| MS.gene87687.t1 | MTR_7g073610 | 98.305 | 118 | 2 | 0 | 294 | 411 | 21 | 138 | 7.56e-78 | 237 |
| MS.gene87687.t1 | MTR_7g073540 | 57.416 | 209 | 47 | 5 | 204 | 411 | 1 | 168 | 8.43e-62 | 197 |
| MS.gene87687.t1 | MTR_7g073580 | 87.234 | 47 | 6 | 0 | 204 | 250 | 1 | 47 | 8.00e-22 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87687.t1 | AT5G01920 | 74.396 | 414 | 99 | 3 | 2 | 409 | 82 | 494 | 0.0 | 607 |
| MS.gene87687.t1 | AT5G01920 | 74.396 | 414 | 99 | 3 | 2 | 409 | 82 | 494 | 0.0 | 607 |
| MS.gene87687.t1 | AT1G68830 | 39.599 | 399 | 200 | 9 | 16 | 406 | 101 | 466 | 7.84e-86 | 272 |
Find 83 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTGCTGCTTCTGCTTTA+AGG | 0.151964 | 7.1:-28871294 | MS.gene87687:CDS |
| CAGATTAAAGTCATTGATTT+TGG | 0.192635 | 7.1:-28872389 | MS.gene87687:CDS |
| CATAATTCTTTCCTATTCTA+AGG | 0.205369 | 7.1:+28872354 | None:intergenic |
| AGGAACTTGGCACATGTTTC+AGG | 0.208561 | 7.1:+28873195 | None:intergenic |
| TCTTCTTTCGGAACTTCTTT+TGG | 0.226055 | 7.1:+28871324 | None:intergenic |
| CAAATCCTTGATAGTGATTC+TGG | 0.233558 | 7.1:-28871379 | MS.gene87687:CDS |
| GCAAGACCAGGTGTTCTTAT+TGG | 0.255792 | 7.1:-28873919 | MS.gene87687:CDS |
| GGCTCCAATGCAATTTGTTT+TGG | 0.279167 | 7.1:-28873875 | MS.gene87687:CDS |
| ATTGAAGGGGCTAAAGAATT+TGG | 0.281260 | 7.1:-28873261 | MS.gene87687:CDS |
| AATTCACAAAAGGTGGAAAA+TGG | 0.296536 | 7.1:-28873140 | MS.gene87687:CDS |
| GGATAAAGTCATTCTTAAAA+AGG | 0.305148 | 7.1:-28873689 | MS.gene87687:intron |
| TGCTTTGAAGAATTTCAATT+TGG | 0.305364 | 7.1:-28871467 | MS.gene87687:CDS |
| TGTTGTTTATTCTGCTGTTT+TGG | 0.310233 | 7.1:-28873776 | MS.gene87687:CDS |
| AAGGTGGAAAATGGCTTGTT+TGG | 0.317886 | 7.1:-28873131 | MS.gene87687:CDS |
| CAGAATCACTATCAAGGATT+TGG | 0.317958 | 7.1:+28871380 | None:intergenic |
| TGCAATTGATGCATATCTTT+TGG | 0.324230 | 7.1:-28873896 | MS.gene87687:CDS |
| GGATCCAAAGGTGTATAATT+AGG | 0.325357 | 7.1:+28872329 | None:intergenic |
| CAAAGCAGCTTGAGACCTTA+AGG | 0.325974 | 7.1:+28871483 | None:intergenic |
| AATTTGGAAATGAGGACATA+TGG | 0.340412 | 7.1:-28871451 | MS.gene87687:CDS |
| AGATAAACGCCTTCTTCTTT+CGG | 0.343291 | 7.1:+28871312 | None:intergenic |
| AGCAAAGCTGCAATTGGTTC+TGG | 0.351901 | 7.1:+28872251 | None:intergenic |
| TCACCACCTAGAAGAAAATA+AGG | 0.353507 | 7.1:+28871268 | None:intergenic |
| TCTTAAGAGATGTAATGATT+TGG | 0.373158 | 7.1:+28872480 | None:intergenic |
| TGTGCCTAATTATACACCTT+TGG | 0.381947 | 7.1:-28872333 | MS.gene87687:CDS |
| TTCTTGATTGGTGGTAAGAT+AGG | 0.387351 | 7.1:-28873814 | MS.gene87687:CDS |
| AAGAGGAGTGATTTCTTGAT+TGG | 0.402107 | 7.1:-28873826 | MS.gene87687:CDS |
| TAAGTTGGATGCTAAATCTA+AGG | 0.411685 | 7.1:-28873710 | MS.gene87687:CDS |
| CTTAAGAAAATTCACGATAC+TGG | 0.413330 | 7.1:-28872464 | MS.gene87687:CDS |
| GCTCTCACCAATCTTGTGGC+AGG | 0.413652 | 7.1:-28872231 | MS.gene87687:intron |
| AGAATTTCAATTTGGAAATG+AGG | 0.423421 | 7.1:-28871459 | MS.gene87687:CDS |
| TGTGGTAGAACATATAGTTC+AGG | 0.425025 | 7.1:+28872293 | None:intergenic |
| CAGGTGAAGGTTGGAATTGA+AGG | 0.425995 | 7.1:-28873276 | MS.gene87687:CDS |
| AATAAAACCTGCCACAAGAT+TGG | 0.430494 | 7.1:+28872224 | None:intergenic |
| GGTGAGAGCAAAGCTGCAAT+TGG | 0.448894 | 7.1:+28872245 | None:intergenic |
| GAAACATGTGCCAAGTTCCT+TGG | 0.452194 | 7.1:-28873192 | MS.gene87687:CDS |
| ACGATACTGGCATTGTTCAC+AGG | 0.453178 | 7.1:-28872451 | MS.gene87687:CDS |
| AGTTCAGGAGGACAGTAATC+AGG | 0.454008 | 7.1:+28872308 | None:intergenic |
| ATGGATATGATTTGAACAAA+TGG | 0.455978 | 7.1:-28871432 | MS.gene87687:CDS |
| AAGATAGGAGAAGGGTCATT+TGG | 0.457236 | 7.1:-28873799 | MS.gene87687:CDS |
| CTTGATAGTGATTCTGGTAG+AGG | 0.461595 | 7.1:-28871373 | MS.gene87687:CDS |
| TAGTGATTCTGGTAGAGGTT+GGG | 0.467038 | 7.1:-28871368 | MS.gene87687:CDS |
| AAATGGCAATACCAACCTTA+AGG | 0.473712 | 7.1:-28871498 | MS.gene87687:CDS |
| TACAAAACTTCCAAGGAACT+TGG | 0.480257 | 7.1:+28873182 | None:intergenic |
| TGCTCTTTGTTGGATTGGCA+TGG | 0.482549 | 7.1:-28873954 | MS.gene87687:CDS |
| AGGAGTGATTTCTTGATTGG+TGG | 0.486103 | 7.1:-28873823 | MS.gene87687:CDS |
| ACCAATTCACAATTCACAAA+AGG | 0.486126 | 7.1:-28873150 | MS.gene87687:CDS |
| CTTTGCTCTCACCAATCTTG+TGG | 0.487689 | 7.1:-28872235 | MS.gene87687:CDS |
| TGGAAAATGCAGGTGAAGGT+TGG | 0.494159 | 7.1:-28873285 | MS.gene87687:intron |
| ATTACAGATTCTAAGTTTGA+AGG | 0.494722 | 7.1:+28872572 | None:intergenic |
| CAAGAGTGGAAGAGGTAAGT+TGG | 0.496404 | 7.1:-28873725 | MS.gene87687:CDS |
| ATGATGCTCAAGAGTGGAAG+AGG | 0.506274 | 7.1:-28873733 | MS.gene87687:CDS |
| ATTGGTGGTAAGATAGGAGA+AGG | 0.514578 | 7.1:-28873808 | MS.gene87687:CDS |
| TATCAGCTACAAAACTTCCA+AGG | 0.517815 | 7.1:+28873175 | None:intergenic |
| TTACAGATTCTAAGTTTGAA+GGG | 0.518568 | 7.1:+28872573 | None:intergenic |
| CTATCCAAAACAAATTGCAT+TGG | 0.523317 | 7.1:+28873871 | None:intergenic |
| CTTATCAGACATGCAGAGGT+TGG | 0.526112 | 7.1:-28873983 | None:intergenic |
| ATAGTGATTCTGGTAGAGGT+TGG | 0.526824 | 7.1:-28871369 | MS.gene87687:CDS |
| ATGGCTTGTTTGGAAATTTG+AGG | 0.527072 | 7.1:-28873121 | MS.gene87687:intron |
| GGATGTAAAGCCTTCCAACT+TGG | 0.528793 | 7.1:-28872429 | MS.gene87687:CDS |
| TTCGTAACAACCAAGTTGGA+AGG | 0.529719 | 7.1:+28872419 | None:intergenic |
| CGATACTGGCATTGTTCACA+GGG | 0.533903 | 7.1:-28872450 | MS.gene87687:CDS |
| GCAGCAACAGACCTTAGAAT+AGG | 0.534028 | 7.1:-28872365 | MS.gene87687:CDS |
| AAAGAAGTTCCGAAAGAAGA+AGG | 0.538947 | 7.1:-28871321 | MS.gene87687:CDS |
| CTGGAAGGAGAAATTTGAAG+AGG | 0.540309 | 7.1:-28873843 | MS.gene87687:CDS |
| AATTCACAATTCACAAAAGG+TGG | 0.543613 | 7.1:-28873147 | MS.gene87687:CDS |
| CTCTACCAGAATCACTATCA+AGG | 0.552037 | 7.1:+28871374 | None:intergenic |
| TGGAATTGTACTCTTGCAAA+TGG | 0.555729 | 7.1:-28871515 | MS.gene87687:CDS |
| GCAGCTTGAGACCTTAAGGT+TGG | 0.570427 | 7.1:+28871487 | None:intergenic |
| GATATGATTTGAACAAATGG+AGG | 0.576550 | 7.1:-28871429 | MS.gene87687:CDS |
| AGGTGAAGGTTGGAATTGAA+GGG | 0.576855 | 7.1:-28873275 | MS.gene87687:CDS |
| GGAAGACTTTGTGTTTCTTG+TGG | 0.591105 | 7.1:+28872275 | None:intergenic |
| AATTTGGTGATTGTGAAGAG+TGG | 0.607180 | 7.1:-28873245 | MS.gene87687:CDS |
| AAAGCTGCAATTGGTTCTGG+AGG | 0.616137 | 7.1:+28872254 | None:intergenic |
| GGACAGTAATCAGGATCCAA+AGG | 0.623204 | 7.1:+28872317 | None:intergenic |
| ATGTTTCGAAATGCGTTGCA+AGG | 0.635472 | 7.1:-28872551 | MS.gene87687:CDS |
| AAAGAGATGATGCTCAAGAG+TGG | 0.645798 | 7.1:-28873739 | MS.gene87687:CDS |
| TTGGTGGTAAGATAGGAGAA+GGG | 0.647730 | 7.1:-28873807 | MS.gene87687:CDS |
| ATATGATTTGAACAAATGGA+GGG | 0.648335 | 7.1:-28871428 | MS.gene87687:CDS |
| GGTGAAGGTTGGAATTGAAG+GGG | 0.652761 | 7.1:-28873274 | MS.gene87687:CDS |
| AGGACTTATCAGACATGCAG+AGG | 0.661529 | 7.1:-28873987 | None:intergenic |
| ATTGCACCAATAAGAACACC+TGG | 0.663441 | 7.1:+28873913 | None:intergenic |
| GGTAGAACATATAGTTCAGG+AGG | 0.667620 | 7.1:+28872296 | None:intergenic |
| TCATGTAATCAGCAAGAGTG+CGG | 0.675765 | 7.1:+28872609 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATTATGTAATAAAG+TGG | - | chr7.1:28873600-28873619 | MS.gene87687:intron | 10.0% |
| !! | ATCATAATCATTTAATAATT+AGG | - | chr7.1:28873345-28873364 | MS.gene87687:intron | 10.0% |
| !!! | TAATTTAATGGTTTTATTGT+TGG | - | chr7.1:28871569-28871588 | MS.gene87687:intron | 15.0% |
| !!! | TTTAACTTTTGTTATGAAAA+TGG | + | chr7.1:28873091-28873110 | None:intergenic | 15.0% |
| !! | ATGACTAAAATTAGATACAT+AGG | - | chr7.1:28871827-28871846 | MS.gene87687:intron | 20.0% |
| !! | ATTTATATTTCAAACAGACA+AGG | + | chr7.1:28873588-28873607 | None:intergenic | 20.0% |
| !! | TTCATTGCTTCTTAATTTAA+TGG | - | chr7.1:28871557-28871576 | MS.gene87687:intron | 20.0% |
| !!! | TTCTACTTAAGATATTTCTA+AGG | + | chr7.1:28873271-28873290 | None:intergenic | 20.0% |
| !!! | TTTTATTGTTGGAATAGTTA+TGG | - | chr7.1:28871580-28871599 | MS.gene87687:intron | 20.0% |
| ! | AAATTATCTAGTAAGACTAC+TGG | + | chr7.1:28872108-28872127 | None:intergenic | 25.0% |
| ! | AATTATCTAGTAAGACTACT+GGG | + | chr7.1:28872107-28872126 | None:intergenic | 25.0% |
| ! | AGAATTTCAATTTGGAAATG+AGG | - | chr7.1:28873736-28873755 | MS.gene87687:CDS | 25.0% |
| ! | ATATGATTTGAACAAATGGA+GGG | - | chr7.1:28873767-28873786 | MS.gene87687:CDS | 25.0% |
| ! | ATGGATATGATTTGAACAAA+TGG | - | chr7.1:28873763-28873782 | MS.gene87687:CDS | 25.0% |
| ! | ATTACAGATTCTAAGTTTGA+AGG | + | chr7.1:28872626-28872645 | None:intergenic | 25.0% |
| ! | CAAAAATAGAATCTGATTGA+TGG | - | chr7.1:28871890-28871909 | MS.gene87687:intron | 25.0% |
| ! | CAATTAGTATAAAGAACAGT+TGG | + | chr7.1:28872541-28872560 | None:intergenic | 25.0% |
| ! | CATAATTCTTTCCTATTCTA+AGG | + | chr7.1:28872844-28872863 | None:intergenic | 25.0% |
| ! | GAATACATATCAAAAAGATC+AGG | + | chr7.1:28873657-28873676 | None:intergenic | 25.0% |
| ! | GATGTTATAAAGGCTTAATT+AGG | + | chr7.1:28873037-28873056 | None:intergenic | 25.0% |
| ! | GGATAAAGTCATTCTTAAAA+AGG | - | chr7.1:28871506-28871525 | MS.gene87687:CDS | 25.0% |
| ! | TCTTAAGAGATGTAATGATT+TGG | + | chr7.1:28872718-28872737 | None:intergenic | 25.0% |
| ! | TGATTCTTCTATCAATATCT+TGG | + | chr7.1:28873204-28873223 | None:intergenic | 25.0% |
| ! | TGTTCTTTATACTAATTGCA+GGG | - | chr7.1:28872543-28872562 | MS.gene87687:CDS | 25.0% |
| ! | TTACAGATTCTAAGTTTGAA+GGG | + | chr7.1:28872625-28872644 | None:intergenic | 25.0% |
| ! | TTCTGTTATCCTATTCATAT+AGG | - | chr7.1:28872993-28873012 | MS.gene87687:intron | 25.0% |
| !! | ACTAGATAATTTGTATCCAT+AGG | - | chr7.1:28872116-28872135 | MS.gene87687:intron | 25.0% |
| !! | AGAATGCATTAGTAGTATTT+TGG | - | chr7.1:28873237-28873256 | MS.gene87687:CDS | 25.0% |
| !! | ATTAGTTCTTGAGTAAATGA+AGG | + | chr7.1:28872224-28872243 | None:intergenic | 25.0% |
| !! | TATCAGCAAAAGAAGTATAT+AGG | - | chr7.1:28873178-28873197 | MS.gene87687:CDS | 25.0% |
| !!! | CAGATTAAAGTCATTGATTT+TGG | - | chr7.1:28872806-28872825 | MS.gene87687:intron | 25.0% |
| !!! | TGCTTTGAAGAATTTCAATT+TGG | - | chr7.1:28873728-28873747 | MS.gene87687:CDS | 25.0% |
| !!! | TTTGTTTTGGATAGTTTATC+TGG | - | chr7.1:28871333-28871352 | MS.gene87687:CDS | 25.0% |
| AACTTGGTTGTTACGAAAAA+AGG | - | chr7.1:28872782-28872801 | MS.gene87687:intron | 30.0% | |
| AATTCACAAAAGGTGGAAAA+TGG | - | chr7.1:28872055-28872074 | MS.gene87687:intron | 30.0% | |
| AATTCACAATTCACAAAAGG+TGG | - | chr7.1:28872048-28872067 | MS.gene87687:intron | 30.0% | |
| AATTTGGAAATGAGGACATA+TGG | - | chr7.1:28873744-28873763 | MS.gene87687:CDS | 30.0% | |
| ACCAATTCACAATTCACAAA+AGG | - | chr7.1:28872045-28872064 | MS.gene87687:intron | 30.0% | |
| ACTTGGTTGTTACGAAAAAA+GGG | - | chr7.1:28872783-28872802 | MS.gene87687:intron | 30.0% | |
| ATGTAAGATATACGCATCTT+AGG | - | chr7.1:28872505-28872524 | MS.gene87687:CDS | 30.0% | |
| CTATCCAAAACAAATTGCAT+TGG | + | chr7.1:28871327-28871346 | None:intergenic | 30.0% | |
| CTGTTCTTTATACTAATTGC+AGG | - | chr7.1:28872542-28872561 | MS.gene87687:CDS | 30.0% | |
| CTTAAGAAAATTCACGATAC+TGG | - | chr7.1:28872731-28872750 | MS.gene87687:intron | 30.0% | |
| GATATGATTTGAACAAATGG+AGG | - | chr7.1:28873766-28873785 | MS.gene87687:CDS | 30.0% | |
| TTTACTATTGTGTTTGCATC+AGG | - | chr7.1:28873302-28873321 | MS.gene87687:intron | 30.0% | |
| ! | AAGAATACAAGTTTGTTTCC+TGG | + | chr7.1:28871739-28871758 | None:intergenic | 30.0% |
| ! | ACCTTTTGTGAATTGTGAAT+TGG | + | chr7.1:28872049-28872068 | None:intergenic | 30.0% |
| ! | CTTTTTGATATGTATTCTGC+TGG | - | chr7.1:28873660-28873679 | MS.gene87687:intron | 30.0% |
| ! | GTAAATGAAGGAGTATAGTA+TGG | + | chr7.1:28872212-28872231 | None:intergenic | 30.0% |
| ! | TAAGTTGGATGCTAAATCTA+AGG | - | chr7.1:28871485-28871504 | MS.gene87687:CDS | 30.0% |
| ! | TAGCAGAAAAAGAGAGTTTT+AGG | - | chr7.1:28872445-28872464 | MS.gene87687:CDS | 30.0% |
| ! | TCTAGAAATTCTGAAGAGAA+AGG | + | chr7.1:28873479-28873498 | None:intergenic | 30.0% |
| ! | TGCAATTGATGCATATCTTT+TGG | - | chr7.1:28871299-28871318 | MS.gene87687:CDS | 30.0% |
| ! | TTTTGGATAGTTTATCTGGA+AGG | - | chr7.1:28871337-28871356 | MS.gene87687:CDS | 30.0% |
| !! | TGTTGTTTATTCTGCTGTTT+TGG | - | chr7.1:28871419-28871438 | MS.gene87687:CDS | 30.0% |
| !! | TTTTATTTAACTGCAAGACC+AGG | - | chr7.1:28871264-28871283 | MS.gene87687:CDS | 30.0% |
| !!! | GTTGGTTTTAACTTTATCCT+TGG | - | chr7.1:28872177-28872196 | MS.gene87687:intron | 30.0% |
| !!! | TTTTTTCGTAACAACCAAGT+TGG | + | chr7.1:28872783-28872802 | None:intergenic | 30.0% |
| AAACTTGTATTCTTTGTCCG+AGG | - | chr7.1:28871745-28871764 | MS.gene87687:intron | 35.0% | |
| AAAGAAGTTCCGAAAGAAGA+AGG | - | chr7.1:28873874-28873893 | MS.gene87687:CDS | 35.0% | |
| AAATGGCAATACCAACCTTA+AGG | - | chr7.1:28873697-28873716 | MS.gene87687:CDS | 35.0% | |
| AACAGTAGGTGAAATGTGAT+TGG | + | chr7.1:28872288-28872307 | None:intergenic | 35.0% | |
| AACTTGTATTCTTTGTCCGA+GGG | - | chr7.1:28871746-28871765 | MS.gene87687:intron | 35.0% | |
| AAGAGGAGTGATTTCTTGAT+TGG | - | chr7.1:28871369-28871388 | MS.gene87687:CDS | 35.0% | |
| AATAAAACCTGCCACAAGAT+TGG | + | chr7.1:28872974-28872993 | None:intergenic | 35.0% | |
| ACATTTCAGTAACACAGTGT+TGG | + | chr7.1:28871793-28871812 | None:intergenic | 35.0% | |
| AGATAAACGCCTTCTTCTTT+CGG | + | chr7.1:28873886-28873905 | None:intergenic | 35.0% | |
| ATCTGATTGATGGAAAATGC+AGG | - | chr7.1:28871900-28871919 | MS.gene87687:intron | 35.0% | |
| ATTAGGCTGTTTATCCAAAC+AGG | + | chr7.1:28873020-28873039 | None:intergenic | 35.0% | |
| ATTGAAGGGGCTAAAGAATT+TGG | - | chr7.1:28871934-28871953 | MS.gene87687:intron | 35.0% | |
| CAGAATCACTATCAAGGATT+TGG | + | chr7.1:28873818-28873837 | None:intergenic | 35.0% | |
| CATTTCAGTAACACAGTGTT+GGG | + | chr7.1:28871792-28871811 | None:intergenic | 35.0% | |
| GGCACTATAACAATATAGAG+CGG | - | chr7.1:28872318-28872337 | MS.gene87687:CDS | 35.0% | |
| GTCAAATCCCGTGAAAAAAT+CGG | + | chr7.1:28871696-28871715 | None:intergenic | 35.0% | |
| TACAAAACTTCCAAGGAACT+TGG | + | chr7.1:28872016-28872035 | None:intergenic | 35.0% | |
| TACGCTAATAGAGTGAAACT+AGG | + | chr7.1:28872381-28872400 | None:intergenic | 35.0% | |
| TATCAGCTACAAAACTTCCA+AGG | + | chr7.1:28872023-28872042 | None:intergenic | 35.0% | |
| TATGAGATTAATCCTCGAGT+TGG | - | chr7.1:28871659-28871678 | MS.gene87687:intron | 35.0% | |
| TCACCACCTAGAAGAAAATA+AGG | + | chr7.1:28873930-28873949 | None:intergenic | 35.0% | |
| TGGAATTGTACTCTTGCAAA+TGG | - | chr7.1:28873680-28873699 | MS.gene87687:intron | 35.0% | |
| TGTGCCTAATTATACACCTT+TGG | - | chr7.1:28872862-28872881 | MS.gene87687:intron | 35.0% | |
| TGTGGTAGAACATATAGTTC+AGG | + | chr7.1:28872905-28872924 | None:intergenic | 35.0% | |
| TTAGGCTGTTTATCCAAACA+GGG | + | chr7.1:28873019-28873038 | None:intergenic | 35.0% | |
| ! | AATTTGGTGATTGTGAAGAG+TGG | - | chr7.1:28871950-28871969 | MS.gene87687:intron | 35.0% |
| ! | GATATGCGCTGATGTTATAA+AGG | + | chr7.1:28873047-28873066 | None:intergenic | 35.0% |
| ! | GATTTTGCTCTTTGTTGGAT+TGG | - | chr7.1:28871236-28871255 | MS.gene87687:CDS | 35.0% |
| ! | GGATCCAAAGGTGTATAATT+AGG | + | chr7.1:28872869-28872888 | None:intergenic | 35.0% |
| ! | TCTTCTTTCGGAACTTCTTT+TGG | + | chr7.1:28873874-28873893 | None:intergenic | 35.0% |
| ! | TTCTTGATTGGTGGTAAGAT+AGG | - | chr7.1:28871381-28871400 | MS.gene87687:CDS | 35.0% |
| ! | TTGATAACATGATTCTCCCT+CGG | + | chr7.1:28871765-28871784 | None:intergenic | 35.0% |
| ! | TTGGAGATTTTGCTCTTTGT+TGG | - | chr7.1:28871231-28871250 | MS.gene87687:CDS | 35.0% |
| !! | ATGGCTTGTTTGGAAATTTG+AGG | - | chr7.1:28872074-28872093 | MS.gene87687:intron | 35.0% |
| !! | CAAATCCTTGATAGTGATTC+TGG | - | chr7.1:28873816-28873835 | MS.gene87687:CDS | 35.0% |
| !! | GTTCTGAACATTTTCAGTGT+TGG | - | chr7.1:28872159-28872178 | MS.gene87687:intron | 35.0% |
| !!! | AGAACATCCGATTTTTTCAC+GGG | - | chr7.1:28871686-28871705 | MS.gene87687:intron | 35.0% |
| !!! | AGGCATCCTTATTTTCTTCT+AGG | - | chr7.1:28873921-28873940 | MS.gene87687:CDS | 35.0% |
| !!! | CAGAACATCCGATTTTTTCA+CGG | - | chr7.1:28871685-28871704 | MS.gene87687:intron | 35.0% |
| !!! | CATCCTTATTTTCTTCTAGG+TGG | - | chr7.1:28873924-28873943 | MS.gene87687:CDS | 35.0% |
| !!! | TAGCGTCGCATTTTTTCATA+GGG | + | chr7.1:28872357-28872376 | None:intergenic | 35.0% |
| !!! | TTCTGCTGTTTTGGTAACAA+AGG | - | chr7.1:28871428-28871447 | MS.gene87687:CDS | 35.0% |
| AAAGAGATGATGCTCAAGAG+TGG | - | chr7.1:28871456-28871475 | MS.gene87687:CDS | 40.0% | |
| AAGATAGGAGAAGGGTCATT+TGG | - | chr7.1:28871396-28871415 | MS.gene87687:CDS | 40.0% | |
| AGGAGTGATTTCTTGATTGG+TGG | - | chr7.1:28871372-28871391 | MS.gene87687:CDS | 40.0% | |
| AGGTGAAGGTTGGAATTGAA+GGG | - | chr7.1:28871920-28871939 | MS.gene87687:intron | 40.0% | |
| ATACACAGTCTGTTTGCTTG+AGG | + | chr7.1:28873544-28873563 | None:intergenic | 40.0% | |
| ATAGTGATTCTGGTAGAGGT+TGG | - | chr7.1:28873826-28873845 | MS.gene87687:CDS | 40.0% | |
| ATGTTTCGAAATGCGTTGCA+AGG | - | chr7.1:28872644-28872663 | MS.gene87687:intron | 40.0% | |
| ATTGCACCAATAAGAACACC+TGG | + | chr7.1:28871285-28871304 | None:intergenic | 40.0% | |
| CAAACAGGGCCTATATGAAT+AGG | + | chr7.1:28873005-28873024 | None:intergenic | 40.0% | |
| CACCTACTGTTGTCAAATAG+CGG | - | chr7.1:28872297-28872316 | MS.gene87687:CDS | 40.0% | |
| CAGGAAGGATATTCAGATTG+TGG | - | chr7.1:28873321-28873340 | MS.gene87687:intron | 40.0% | |
| CTATTCATATAGGCCCTGTT+TGG | - | chr7.1:28873003-28873022 | MS.gene87687:intron | 40.0% | |
| CTATTGTGTTTGCATCAGGA+AGG | - | chr7.1:28873306-28873325 | MS.gene87687:intron | 40.0% | |
| CTCTACCAGAATCACTATCA+AGG | + | chr7.1:28873824-28873843 | None:intergenic | 40.0% | |
| CTGGAAGGAGAAATTTGAAG+AGG | - | chr7.1:28871352-28871371 | MS.gene87687:CDS | 40.0% | |
| GATGATGCATAGGAAACCTA+TGG | + | chr7.1:28872135-28872154 | None:intergenic | 40.0% | |
| GGAAGACTTTGTGTTTCTTG+TGG | + | chr7.1:28872923-28872942 | None:intergenic | 40.0% | |
| GGTAGAACATATAGTTCAGG+AGG | + | chr7.1:28872902-28872921 | None:intergenic | 40.0% | |
| TACACAGTCTGTTTGCTTGA+GGG | + | chr7.1:28873543-28873562 | None:intergenic | 40.0% | |
| TAGTATGGTACTAGACTCCA+AGG | + | chr7.1:28872197-28872216 | None:intergenic | 40.0% | |
| TAGTGATTCTGGTAGAGGTT+GGG | - | chr7.1:28873827-28873846 | MS.gene87687:CDS | 40.0% | |
| TCATGTAATCAGCAAGAGTG+CGG | + | chr7.1:28872589-28872608 | None:intergenic | 40.0% | |
| TTGATGGAAAATGCAGGTGA+AGG | - | chr7.1:28871906-28871925 | MS.gene87687:intron | 40.0% | |
| ! | ATTGGTGGTAAGATAGGAGA+AGG | - | chr7.1:28871387-28871406 | MS.gene87687:CDS | 40.0% |
| ! | CAGAACTCATGATGATGCAT+AGG | + | chr7.1:28872145-28872164 | None:intergenic | 40.0% |
| ! | TATCTGCTGCTTCTGCTTTA+AGG | - | chr7.1:28873901-28873920 | MS.gene87687:CDS | 40.0% |
| ! | TTCGTAACAACCAAGTTGGA+AGG | + | chr7.1:28872779-28872798 | None:intergenic | 40.0% |
| ! | TTGGTGGTAAGATAGGAGAA+GGG | - | chr7.1:28871388-28871407 | MS.gene87687:CDS | 40.0% |
| ! | TTTTCTTCTAGGTGGTGATC+AGG | - | chr7.1:28873932-28873951 | MS.gene87687:CDS | 40.0% |
| !! | AAGGTGGAAAATGGCTTGTT+TGG | - | chr7.1:28872064-28872083 | MS.gene87687:intron | 40.0% |
| !! | CTTGATAGTGATTCTGGTAG+AGG | - | chr7.1:28873822-28873841 | MS.gene87687:CDS | 40.0% |
| !! | GGCTCCAATGCAATTTGTTT+TGG | - | chr7.1:28871320-28871339 | MS.gene87687:CDS | 40.0% |
| !!! | AGCGTCGCATTTTTTCATAG+GGG | + | chr7.1:28872356-28872375 | None:intergenic | 40.0% |
| !!! | CTAGCGTCGCATTTTTTCAT+AGG | + | chr7.1:28872358-28872377 | None:intergenic | 40.0% |
| ACGATACTGGCATTGTTCAC+AGG | - | chr7.1:28872744-28872763 | MS.gene87687:intron | 45.0% | |
| AGGAACTTGGCACATGTTTC+AGG | + | chr7.1:28872003-28872022 | None:intergenic | 45.0% | |
| AGTTCAGGAGGACAGTAATC+AGG | + | chr7.1:28872890-28872909 | None:intergenic | 45.0% | |
| ATGATGCTCAAGAGTGGAAG+AGG | - | chr7.1:28871462-28871481 | MS.gene87687:CDS | 45.0% | |
| CAAAGCAGCTTGAGACCTTA+AGG | + | chr7.1:28873715-28873734 | None:intergenic | 45.0% | |
| CAAGAGTGGAAGAGGTAAGT+TGG | - | chr7.1:28871470-28871489 | MS.gene87687:CDS | 45.0% | |
| CAGGTGAAGGTTGGAATTGA+AGG | - | chr7.1:28871919-28871938 | MS.gene87687:intron | 45.0% | |
| CGATACTGGCATTGTTCACA+GGG | - | chr7.1:28872745-28872764 | MS.gene87687:intron | 45.0% | |
| CTTTGCTCTCACCAATCTTG+TGG | - | chr7.1:28872960-28872979 | MS.gene87687:intron | 45.0% | |
| GAAACATGTGCCAAGTTCCT+TGG | - | chr7.1:28872003-28872022 | MS.gene87687:intron | 45.0% | |
| GCAAGACCAGGTGTTCTTAT+TGG | - | chr7.1:28871276-28871295 | MS.gene87687:CDS | 45.0% | |
| GCAGCAACAGACCTTAGAAT+AGG | - | chr7.1:28872830-28872849 | MS.gene87687:intron | 45.0% | |
| GGACAGTAATCAGGATCCAA+AGG | + | chr7.1:28872881-28872900 | None:intergenic | 45.0% | |
| GGATGTAAAGCCTTCCAACT+TGG | - | chr7.1:28872766-28872785 | MS.gene87687:intron | 45.0% | |
| GGTGAAGGTTGGAATTGAAG+GGG | - | chr7.1:28871921-28871940 | MS.gene87687:intron | 45.0% | |
| GTTTCCTGGAGTCACTCATT+TGG | + | chr7.1:28871725-28871744 | None:intergenic | 45.0% | |
| TGCCGCTATTTGACAACAGT+AGG | + | chr7.1:28872302-28872321 | None:intergenic | 45.0% | |
| TGGAAAATGCAGGTGAAGGT+TGG | - | chr7.1:28871910-28871929 | MS.gene87687:intron | 45.0% | |
| ! | AGCAAAGCTGCAATTGGTTC+TGG | + | chr7.1:28872947-28872966 | None:intergenic | 45.0% |
| !! | AAAGCTGCAATTGGTTCTGG+AGG | + | chr7.1:28872944-28872963 | None:intergenic | 45.0% |
| !! | TGCTCTTTGTTGGATTGGCA+TGG | - | chr7.1:28871241-28871260 | MS.gene87687:CDS | 45.0% |
| CCATCCAAATGAGTGACTCC+AGG | - | chr7.1:28871718-28871737 | MS.gene87687:intron | 50.0% | |
| CCTGGAGTCACTCATTTGGA+TGG | + | chr7.1:28871721-28871740 | None:intergenic | 50.0% | |
| GCAGCTTGAGACCTTAAGGT+TGG | + | chr7.1:28873711-28873730 | None:intergenic | 50.0% | |
| GCAGGGTTGTCCATATCACA+GGG | - | chr7.1:28872560-28872579 | MS.gene87687:CDS | 50.0% | |
| GGTGAGAGCAAAGCTGCAAT+TGG | + | chr7.1:28872953-28872972 | None:intergenic | 50.0% | |
| TGCAGGGTTGTCCATATCAC+AGG | - | chr7.1:28872559-28872578 | MS.gene87687:CDS | 50.0% | |
| TTCTGCTAATGCCGCCACAT+CGG | + | chr7.1:28872433-28872452 | None:intergenic | 50.0% | |
| ! | CCACATCGGCTAGCAAAATC+TGG | + | chr7.1:28872419-28872438 | None:intergenic | 50.0% |
| ! | CCAGATTTTGCTAGCCGATG+TGG | - | chr7.1:28872416-28872435 | MS.gene87687:CDS | 50.0% |
| ! | GATTTTGCTAGCCGATGTGG+CGG | - | chr7.1:28872419-28872438 | MS.gene87687:CDS | 50.0% |
| AGTGCGGTCTCCCTGTGATA+TGG | + | chr7.1:28872573-28872592 | None:intergenic | 55.0% | |
| GATGTTCTGCTGCCAACTCG+AGG | + | chr7.1:28871674-28871693 | None:intergenic | 55.0% | |
| GCTCTCACCAATCTTGTGGC+AGG | - | chr7.1:28872964-28872983 | MS.gene87687:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 28871222 | 28873995 | 28871222 | ID=MS.gene87687 |
| chr7.1 | mRNA | 28871222 | 28873995 | 28871222 | ID=MS.gene87687.t1;Parent=MS.gene87687 |
| chr7.1 | exon | 28873690 | 28873995 | 28873690 | ID=MS.gene87687.t1.exon1;Parent=MS.gene87687.t1 |
| chr7.1 | CDS | 28873690 | 28873995 | 28873690 | ID=cds.MS.gene87687.t1;Parent=MS.gene87687.t1 |
| chr7.1 | exon | 28873122 | 28873295 | 28873122 | ID=MS.gene87687.t1.exon2;Parent=MS.gene87687.t1 |
| chr7.1 | CDS | 28873122 | 28873295 | 28873122 | ID=cds.MS.gene87687.t1;Parent=MS.gene87687.t1 |
| chr7.1 | exon | 28872232 | 28872636 | 28872232 | ID=MS.gene87687.t1.exon3;Parent=MS.gene87687.t1 |
| chr7.1 | CDS | 28872232 | 28872636 | 28872232 | ID=cds.MS.gene87687.t1;Parent=MS.gene87687.t1 |
| chr7.1 | exon | 28871222 | 28871572 | 28871222 | ID=MS.gene87687.t1.exon4;Parent=MS.gene87687.t1 |
| chr7.1 | CDS | 28871222 | 28871572 | 28871222 | ID=cds.MS.gene87687.t1;Parent=MS.gene87687.t1 |
| Gene Sequence |
| Protein sequence |
