Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51837.t1 | XP_003623971.1 | 98 | 402 | 8 | 0 | 1 | 402 | 136 | 537 | 5.60E-224 | 786.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51837.t1 | Q0DWA9 | 73.1 | 402 | 104 | 3 | 1 | 401 | 139 | 537 | 4.3e-172 | 605.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51837.t1 | G7L4P1 | 98.0 | 402 | 8 | 0 | 1 | 402 | 136 | 537 | 4.0e-224 | 786.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene51837 | -0.823729 | 1.18E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene51837 | -0.896941 | 2.27E-76 | -1.69E-46 |
| MS.gene049173 | MS.gene51837 | -0.837313 | 5.60E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene51837 | -0.89965 | 1.61E-77 | -1.69E-46 |
| MS.gene049222 | MS.gene51837 | -0.88906 | 3.39E-73 | -1.69E-46 |
| MS.gene049232 | MS.gene51837 | -0.831186 | 1.92E-55 | -1.69E-46 |
| MS.gene049281 | MS.gene51837 | 0.805774 | 1.13E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene51837 | -0.891459 | 3.90E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene51837 | -0.89768 | 1.11E-76 | -1.69E-46 |
| MS.gene04939 | MS.gene51837 | -0.816718 | 4.79E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene51837 | 0.800383 | 1.48E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene51837 | -0.827411 | 1.59E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene51837 | -0.830079 | 3.59E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene51837 | -0.833907 | 4.07E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene51837 | -0.812123 | 4.97E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene51837 | -0.844742 | 6.26E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene51837 | -0.920207 | 1.71E-87 | -1.69E-46 |
| MS.gene050165 | MS.gene51837 | -0.921633 | 2.78E-88 | -1.69E-46 |
| MS.gene050170 | MS.gene51837 | -0.801314 | 9.55E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene51837 | -0.800858 | 1.18E-48 | -1.69E-46 |
| MS.gene050323 | MS.gene51837 | -0.81322 | 2.86E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene51837 | -0.867556 | 1.25E-65 | -1.69E-46 |
| MS.gene050353 | MS.gene51837 | 0.822438 | 2.37E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene51837 | 0.813009 | 3.18E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene51837 | -0.824896 | 6.30E-54 | -1.69E-46 |
| MS.gene050475 | MS.gene51837 | 0.804353 | 2.25E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene51837 | -0.910441 | 1.87E-82 | -1.69E-46 |
| MS.gene050518 | MS.gene51837 | -0.888813 | 4.23E-73 | -1.69E-46 |
| MS.gene050538 | MS.gene51837 | -0.828371 | 9.33E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene51837 | -0.854243 | 1.40E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene51837 | -0.893247 | 7.51E-75 | -1.69E-46 |
| MS.gene050647 | MS.gene51837 | 0.826596 | 2.49E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene51837 | -0.867562 | 1.25E-65 | -1.69E-46 |
| MS.gene050699 | MS.gene51837 | -0.876816 | 1.03E-68 | -1.69E-46 |
| MS.gene050747 | MS.gene51837 | -0.826096 | 3.27E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene51837 | -0.85649 | 3.11E-62 | -1.69E-46 |
| MS.gene05079 | MS.gene51837 | 0.804152 | 2.48E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene51837 | -0.826734 | 2.31E-54 | -1.69E-46 |
| MS.gene050832 | MS.gene51837 | 0.811811 | 5.81E-51 | -1.69E-46 |
| MS.gene050833 | MS.gene51837 | 0.820053 | 8.40E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene51837 | -0.824924 | 6.20E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene51837 | -0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene050876 | MS.gene51837 | -0.826196 | 3.10E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene51837 | -0.836141 | 1.11E-56 | -1.69E-46 |
| MS.gene050950 | MS.gene51837 | -0.828696 | 7.79E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene51837 | -0.872286 | 3.57E-67 | -1.69E-46 |
| MS.gene05100 | MS.gene51837 | -0.871438 | 6.83E-67 | -1.69E-46 |
| MS.gene051127 | MS.gene51837 | 0.815667 | 8.22E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene51837 | 0.814281 | 1.67E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene51837 | -0.8196 | 1.07E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene51837 | -0.858052 | 1.07E-62 | -1.69E-46 |
| MS.gene051364 | MS.gene51837 | 0.81813 | 2.30E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene51837 | 0.812139 | 4.93E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene51837 | -0.853105 | 2.98E-61 | -1.69E-46 |
| MS.gene051666 | MS.gene51837 | -0.832425 | 9.52E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene51837 | -0.835324 | 1.79E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene51837 | -0.882207 | 1.26E-70 | -1.69E-46 |
| MS.gene051858 | MS.gene51837 | -0.842943 | 1.90E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene51837 | -0.822356 | 2.48E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene51837 | -0.854881 | 9.16E-62 | -1.69E-46 |
| MS.gene052271 | MS.gene51837 | -0.827321 | 1.67E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene51837 | -0.829618 | 4.65E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene51837 | -0.849249 | 3.65E-60 | -1.69E-46 |
| MS.gene052486 | MS.gene51837 | -0.853836 | 1.84E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene51837 | -0.828596 | 8.24E-55 | -1.69E-46 |
| MS.gene052605 | MS.gene51837 | -0.833101 | 6.47E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene51837 | -0.822338 | 2.50E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene51837 | -0.801929 | 7.14E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene51837 | -0.822626 | 2.14E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene51837 | -0.820972 | 5.17E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene51837 | -0.815951 | 7.11E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene51837 | -0.810356 | 1.20E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene51837 | -0.839498 | 1.53E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene51837 | -0.811201 | 7.88E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene51837 | -0.868353 | 6.96E-66 | -1.69E-46 |
| MS.gene053284 | MS.gene51837 | -0.814063 | 1.86E-51 | -1.69E-46 |
| MS.gene053285 | MS.gene51837 | -0.804172 | 2.45E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene51837 | -0.864715 | 9.96E-65 | -1.69E-46 |
| MS.gene053322 | MS.gene51837 | -0.83355 | 5.00E-56 | -1.69E-46 |
| MS.gene053420 | MS.gene51837 | 0.831226 | 1.88E-55 | -1.69E-46 |
| MS.gene053421 | MS.gene51837 | 0.802018 | 6.85E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene51837 | -0.829325 | 5.48E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene51837 | -0.872108 | 4.10E-67 | -1.69E-46 |
| MS.gene053824 | MS.gene51837 | -0.811092 | 8.32E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene51837 | -0.809231 | 2.10E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene51837 | -0.801722 | 7.87E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene51837 | -0.828432 | 9.02E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene51837 | -0.835605 | 1.52E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene51837 | -0.893103 | 8.58E-75 | -1.69E-46 |
| MS.gene054706 | MS.gene51837 | 0.821364 | 4.20E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene51837 | -0.873084 | 1.93E-67 | -1.69E-46 |
| MS.gene054927 | MS.gene51837 | -0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene51837 | -0.883771 | 3.38E-71 | -1.69E-46 |
| MS.gene054959 | MS.gene51837 | 0.808483 | 3.03E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene51837 | 0.834704 | 2.57E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene51837 | -0.81842 | 1.98E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene51837 | -0.884778 | 1.43E-71 | -1.69E-46 |
| MS.gene055397 | MS.gene51837 | -0.802111 | 6.55E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene51837 | -0.833146 | 6.31E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene51837 | -0.899658 | 1.59E-77 | -1.69E-46 |
| MS.gene055577 | MS.gene51837 | -0.882502 | 9.87E-71 | -1.69E-46 |
| MS.gene055634 | MS.gene51837 | -0.803004 | 4.29E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene51837 | -0.822056 | 2.91E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene51837 | -0.811994 | 5.30E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene51837 | -0.80638 | 8.46E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene51837 | -0.855066 | 8.10E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene51837 | -0.823411 | 1.41E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene51837 | -0.853675 | 2.04E-61 | -1.69E-46 |
| MS.gene055776 | MS.gene51837 | -0.816877 | 4.41E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene51837 | -0.839712 | 1.34E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene51837 | -0.802704 | 4.94E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene51837 | -0.831716 | 1.43E-55 | -1.69E-46 |
| MS.gene055956 | MS.gene51837 | 0.840088 | 1.07E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene51837 | -0.842375 | 2.69E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene51837 | -0.850291 | 1.87E-60 | -1.69E-46 |
| MS.gene056504 | MS.gene51837 | -0.851311 | 9.64E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene51837 | -0.848955 | 4.40E-60 | -1.69E-46 |
| MS.gene056549 | MS.gene51837 | -0.812808 | 3.52E-51 | -1.69E-46 |
| MS.gene056550 | MS.gene51837 | 0.86025 | 2.36E-63 | -1.69E-46 |
| MS.gene056657 | MS.gene51837 | -0.888051 | 8.32E-73 | -1.69E-46 |
| MS.gene056692 | MS.gene51837 | -0.857639 | 1.42E-62 | -1.69E-46 |
| MS.gene056856 | MS.gene51837 | 0.81258 | 3.95E-51 | -1.69E-46 |
| MS.gene056898 | MS.gene51837 | -0.804416 | 2.18E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene51837 | -0.802923 | 4.45E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene51837 | -0.838744 | 2.40E-57 | -1.69E-46 |
| MS.gene057246 | MS.gene51837 | -0.812213 | 4.75E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene51837 | -0.80251 | 5.42E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene51837 | -0.85486 | 9.29E-62 | -1.69E-46 |
| MS.gene057658 | MS.gene51837 | -0.82876 | 7.52E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene51837 | -0.855276 | 7.03E-62 | -1.69E-46 |
| MS.gene058019 | MS.gene51837 | -0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene058117 | MS.gene51837 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene51837 | 0.828673 | 7.89E-55 | -1.69E-46 |
| MS.gene058335 | MS.gene51837 | -0.800931 | 1.14E-48 | -1.69E-46 |
| MS.gene058338 | MS.gene51837 | -0.815004 | 1.15E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene51837 | -0.841099 | 5.84E-58 | -1.69E-46 |
| MS.gene058419 | MS.gene51837 | -0.900858 | 4.81E-78 | -1.69E-46 |
| MS.gene058544 | MS.gene51837 | -0.874162 | 8.38E-68 | -1.69E-46 |
| MS.gene058723 | MS.gene51837 | -0.854991 | 8.51E-62 | -1.69E-46 |
| MS.gene058773 | MS.gene51837 | -0.88275 | 8.02E-71 | -1.69E-46 |
| MS.gene058838 | MS.gene51837 | -0.834234 | 3.37E-56 | -1.69E-46 |
| MS.gene05883 | MS.gene51837 | -0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene51837 | -0.895912 | 6.10E-76 | -1.69E-46 |
| MS.gene059023 | MS.gene51837 | -0.870536 | 1.36E-66 | -1.69E-46 |
| MS.gene059029 | MS.gene51837 | -0.853315 | 2.59E-61 | -1.69E-46 |
| MS.gene059079 | MS.gene51837 | -0.814006 | 1.92E-51 | -1.69E-46 |
| MS.gene059102 | MS.gene51837 | 0.834295 | 3.26E-56 | -1.69E-46 |
| MS.gene05912 | MS.gene51837 | -0.832753 | 7.90E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene51837 | -0.816405 | 5.62E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene51837 | -0.835861 | 1.31E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene51837 | -0.833458 | 5.27E-56 | -1.69E-46 |
| MS.gene059479 | MS.gene51837 | 0.834824 | 2.40E-56 | -1.69E-46 |
| MS.gene059526 | MS.gene51837 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene51837 | -0.811207 | 7.86E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene51837 | -0.919428 | 4.56E-87 | -1.69E-46 |
| MS.gene059718 | MS.gene51837 | -0.878564 | 2.54E-69 | -1.69E-46 |
| MS.gene059756 | MS.gene51837 | -0.855611 | 5.62E-62 | -1.69E-46 |
| MS.gene059801 | MS.gene51837 | -0.810528 | 1.10E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene51837 | -0.869603 | 2.74E-66 | -1.69E-46 |
| MS.gene059902 | MS.gene51837 | -0.841209 | 5.46E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene51837 | -0.814651 | 1.38E-51 | -1.69E-46 |
| MS.gene060337 | MS.gene51837 | 0.827598 | 1.43E-54 | -1.69E-46 |
| MS.gene060341 | MS.gene51837 | -0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene51837 | -0.872258 | 3.65E-67 | -1.69E-46 |
| MS.gene060728 | MS.gene51837 | -0.824846 | 6.47E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene51837 | -0.880402 | 5.65E-70 | -1.69E-46 |
| MS.gene06077 | MS.gene51837 | -0.870077 | 1.92E-66 | -1.69E-46 |
| MS.gene060823 | MS.gene51837 | 0.847109 | 1.42E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene51837 | -0.849562 | 2.99E-60 | -1.69E-46 |
| MS.gene060982 | MS.gene51837 | -0.851625 | 7.86E-61 | -1.69E-46 |
| MS.gene061134 | MS.gene51837 | -0.812648 | 3.81E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene51837 | -0.869176 | 3.77E-66 | -1.69E-46 |
| MS.gene061200 | MS.gene51837 | -0.829004 | 6.56E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 92 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCTTGAGGTTTGGTATT+TGG | 0.124495 | 7.4:-28241882 | None:intergenic |
| CCATTCTCTGTGCTTCTTAC+TGG | 0.166120 | 7.4:+28240526 | MS.gene51837:CDS |
| CTTCTTTCCCAATGACAAAA+AGG | 0.201334 | 7.4:-28243175 | None:intergenic |
| GGTTACAGTGTCATCGGTTT+CGG | 0.211475 | 7.4:+28242290 | MS.gene51837:CDS |
| CATAGCATTCGCTGTGGTTT+GGG | 0.211873 | 7.4:+28241630 | MS.gene51837:CDS |
| CCTTCCTATATGACATCTTC+TGG | 0.226829 | 7.4:+28242042 | MS.gene51837:CDS |
| GTTTATGCTTTACAAACTAA+TGG | 0.249829 | 7.4:+28240922 | MS.gene51837:CDS |
| TGAGCAAGAGAAGCTATTAA+AGG | 0.254085 | 7.4:+28240578 | MS.gene51837:CDS |
| GTTACAGTGTCATCGGTTTC+GGG | 0.257862 | 7.4:+28242291 | MS.gene51837:CDS |
| ATACATAGCTTTGAATTTGA+TGG | 0.290429 | 7.4:+28242717 | MS.gene51837:CDS |
| AATGAAACCGATATTGATAT+TGG | 0.297635 | 7.4:+28240203 | MS.gene51837:CDS |
| GCATAGCATTCGCTGTGGTT+TGG | 0.331467 | 7.4:+28241629 | MS.gene51837:CDS |
| ACCGCGTTTATTCGATCCTT+GGG | 0.332274 | 7.4:+28242265 | MS.gene51837:CDS |
| GGGTATCGCTTTGATAATTA+CGG | 0.355376 | 7.4:+28241846 | MS.gene51837:intron |
| AAGATGGTTCATTGATGTTC+TGG | 0.357441 | 7.4:+28240946 | MS.gene51837:CDS |
| ATATACTTTACAGGTATGAT+TGG | 0.373989 | 7.4:+28242518 | MS.gene51837:intron |
| TTTATGCTTTACAAACTAAT+GGG | 0.398548 | 7.4:+28240923 | MS.gene51837:CDS |
| CGCGGTATCTTGAGCAGCAT+GGG | 0.404406 | 7.4:-28242248 | None:intergenic |
| AGGTATTCCAATATCAATAT+CGG | 0.409099 | 7.4:-28240210 | None:intergenic |
| ACGATGAGTGCCTATGGTTT+AGG | 0.409248 | 7.4:+28242580 | MS.gene51837:CDS |
| TACCGCGTTTATTCGATCCT+TGG | 0.419818 | 7.4:+28242264 | MS.gene51837:CDS |
| ATAATCATCACCTTGAGGTT+TGG | 0.432877 | 7.4:-28241889 | None:intergenic |
| GGGACTGCAAACTTGCTTAG+TGG | 0.435026 | 7.4:+28241361 | MS.gene51837:intron |
| AAGAATATCTTGACCAATCC+AGG | 0.442943 | 7.4:-28241677 | None:intergenic |
| TTTACTAACCAAGTGTAAAT+GGG | 0.447535 | 7.4:-28242774 | None:intergenic |
| GTGCTTCTTACTGGTCTGCC+TGG | 0.461814 | 7.4:+28240535 | MS.gene51837:CDS |
| AACACCCTCTCTGGCAGTCC+AGG | 0.466046 | 7.4:-28240553 | None:intergenic |
| CTTCCTATATGACATCTTCT+GGG | 0.469044 | 7.4:+28242043 | MS.gene51837:CDS |
| TTTACAAACTAATGGGAAGA+TGG | 0.472450 | 7.4:+28240930 | MS.gene51837:CDS |
| TGGGGTGGTTACAGTGTCAT+CGG | 0.481076 | 7.4:+28242284 | MS.gene51837:CDS |
| ACACCCAGAAGATGTCATAT+AGG | 0.489454 | 7.4:-28242046 | None:intergenic |
| TAGCTTTGAATTTGATGGAT+GGG | 0.490494 | 7.4:+28242722 | MS.gene51837:CDS |
| GCGGGAGATTACTCGTCTAC+TGG | 0.490969 | 7.4:-28243273 | None:intergenic |
| TTGCTCAATAACACCCTCTC+TGG | 0.497863 | 7.4:-28240562 | None:intergenic |
| ACCTGCTGTCATGCTTCCAC+TGG | 0.500327 | 7.4:+28240229 | MS.gene51837:CDS |
| ATGTGAAACAGCACCGAAGA+AGG | 0.501888 | 7.4:-28241581 | None:intergenic |
| ATACTCTCCACGACGTCCAC+AGG | 0.502854 | 7.4:+28240461 | MS.gene51837:CDS |
| AACGCCGTGTATCGTATGCC+TGG | 0.505276 | 7.4:+28241659 | MS.gene51837:CDS |
| TATGTGAAAGTACCCTTCTT+CGG | 0.508554 | 7.4:+28241568 | MS.gene51837:CDS |
| CCATGAGAGTGTGATGATAG+TGG | 0.511765 | 7.4:+28242088 | MS.gene51837:CDS |
| GTCATGCTTCCACTGGATGC+CGG | 0.519867 | 7.4:+28240236 | MS.gene51837:CDS |
| TTGTGGACGATGAGTGCCTA+TGG | 0.521690 | 7.4:+28242574 | MS.gene51837:CDS |
| CCACTATCATCACACTCTCA+TGG | 0.522407 | 7.4:-28242088 | None:intergenic |
| GGGACTATATACAGCAAAGC+TGG | 0.523296 | 7.4:-28242754 | None:intergenic |
| CCAGTAAGAAGCACAGAGAA+TGG | 0.528439 | 7.4:-28240526 | None:intergenic |
| TCTGCCTGGACTGCCAGAGA+GGG | 0.540666 | 7.4:+28240549 | MS.gene51837:CDS |
| TTCGAGCAGGATACTTCTTG+TGG | 0.550885 | 7.4:+28242557 | MS.gene51837:CDS |
| CGTGTATCGTATGCCTGGAT+TGG | 0.553817 | 7.4:+28241664 | MS.gene51837:CDS |
| GTCTGCCTGGACTGCCAGAG+AGG | 0.555701 | 7.4:+28240548 | MS.gene51837:CDS |
| ACGCGGTATCTTGAGCAGCA+TGG | 0.557275 | 7.4:-28242249 | None:intergenic |
| GAAAATGCTACTAAAAGCCC+TGG | 0.557670 | 7.4:-28242326 | None:intergenic |
| TCCTCTTTGATGTGAGGGCA+AGG | 0.564220 | 7.4:-28243243 | None:intergenic |
| ATAGCTTTGAATTTGATGGA+TGG | 0.564608 | 7.4:+28242721 | MS.gene51837:CDS |
| CTTCTAAATATAGAGAATGC+TGG | 0.565274 | 7.4:+28240830 | MS.gene51837:CDS |
| ATGGTTCATTGATGTTCTGG+TGG | 0.565632 | 7.4:+28240949 | MS.gene51837:CDS |
| CAGCGAATGCTATGCAGAAG+GGG | 0.567384 | 7.4:-28241621 | None:intergenic |
| TCCAGTGGAAGCATGACAGC+AGG | 0.569868 | 7.4:-28240230 | None:intergenic |
| GGTGATAAGAGTGGAGAAGA+TGG | 0.570626 | 7.4:+28242221 | MS.gene51837:CDS |
| CTATAGCATACCTAAACCAT+AGG | 0.572085 | 7.4:-28242590 | None:intergenic |
| ATAGCATTCGCTGTGGTTTG+GGG | 0.575530 | 7.4:+28241631 | MS.gene51837:CDS |
| ACAGCGAATGCTATGCAGAA+GGG | 0.578803 | 7.4:-28241622 | None:intergenic |
| TGATGATCCTCTTTGATGTG+AGG | 0.582482 | 7.4:-28243249 | None:intergenic |
| TATATAGTCCCATTTACACT+TGG | 0.584363 | 7.4:+28242766 | MS.gene51837:CDS |
| AAAATGTTCATAGTTTCAGA+TGG | 0.586719 | 7.4:+28241524 | MS.gene51837:intron |
| AAGGCTTCACCGGCATCCAG+TGG | 0.588506 | 7.4:-28240245 | None:intergenic |
| CGTTTATTCGATCCTTGGGG+TGG | 0.589284 | 7.4:+28242269 | MS.gene51837:CDS |
| GCGAAGAGGAACCTTCGAGC+AGG | 0.590157 | 7.4:+28242544 | MS.gene51837:CDS |
| CAATCCAGGCATACGATACA+CGG | 0.590284 | 7.4:-28241663 | None:intergenic |
| TATATACAAAACAAGTCCAC+AGG | 0.595990 | 7.4:+28240275 | MS.gene51837:CDS |
| CACAGCGAATGCTATGCAGA+AGG | 0.597296 | 7.4:-28241623 | None:intergenic |
| TTGAATTTGATGGATGGGCA+TGG | 0.598006 | 7.4:+28242727 | MS.gene51837:CDS |
| TTGTCATTGGGAAAGAAGAG+AGG | 0.601284 | 7.4:+28243180 | MS.gene51837:CDS |
| CCAGAAGATGTCATATAGGA+AGG | 0.604622 | 7.4:-28242042 | None:intergenic |
| TGTCCAAATACCAAACCTCA+AGG | 0.614521 | 7.4:+28241879 | MS.gene51837:CDS |
| GATGATCCTCTTTGATGTGA+GGG | 0.616637 | 7.4:-28243248 | None:intergenic |
| TGTGAAACAGCACCGAAGAA+GGG | 0.620570 | 7.4:-28241580 | None:intergenic |
| GTAGCTCGCGGTGATAAGAG+TGG | 0.630975 | 7.4:+28242212 | MS.gene51837:CDS |
| CCGCGTTTATTCGATCCTTG+GGG | 0.643328 | 7.4:+28242266 | MS.gene51837:CDS |
| ACATCGACCTGTGGACGTCG+TGG | 0.644315 | 7.4:-28240468 | None:intergenic |
| ACAAGAAGTATCCTGCTCGA+AGG | 0.648586 | 7.4:-28242555 | None:intergenic |
| TTACAGTGTCATCGGTTTCG+GGG | 0.651346 | 7.4:+28242292 | MS.gene51837:CDS |
| AACGAATGAAAGTGCTGCCG+TGG | 0.651931 | 7.4:-28240879 | None:intergenic |
| GCCTTGCCCTCACATCAAAG+AGG | 0.653911 | 7.4:+28243242 | MS.gene51837:CDS |
| TCAAAGCTATGTATGTGACA+AGG | 0.659484 | 7.4:-28242708 | None:intergenic |
| GGTATGATTGGCTAGCGAAG+AGG | 0.666042 | 7.4:+28242530 | MS.gene51837:intron |
| AGCGAATGCTATGCAGAAGG+GGG | 0.677222 | 7.4:-28241620 | None:intergenic |
| ACTTCTTTACAGGTAGCTCG+CGG | 0.677537 | 7.4:+28242200 | MS.gene51837:intron |
| CTTCTGCATAGCATTCGCTG+TGG | 0.687281 | 7.4:+28241624 | MS.gene51837:CDS |
| GCGGTATCTTGAGCAGCATG+GGG | 0.687520 | 7.4:-28242247 | None:intergenic |
| ACTTCTGCAACATCGACCTG+TGG | 0.688487 | 7.4:-28240477 | None:intergenic |
| ATGACACTGTAACCACCCCA+AGG | 0.695167 | 7.4:-28242281 | None:intergenic |
| CCCCAAGGATCGAATAAACG+CGG | 0.705852 | 7.4:-28242266 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGATATATAGAAATTTA+TGG | + | chr7.4:28241784-28241803 | MS.gene51837:intron | 10.0% |
| !! | TAACAAATCAAAAAAAATAG+CGG | + | chr7.4:28242872-28242891 | MS.gene51837:intron | 15.0% |
| !!! | AATGTTATGTATTTTGTTAA+TGG | + | chr7.4:28242471-28242490 | MS.gene51837:intron | 15.0% |
| !!! | GTTTTGTATATATTTTTTCA+AGG | - | chr7.4:28240267-28240286 | None:intergenic | 15.0% |
| !! | AAATCAAACTTTGTATAGAA+TGG | - | chr7.4:28242144-28242163 | None:intergenic | 20.0% |
| !! | ATTTATTATTCCAAACACTT+TGG | + | chr7.4:28241237-28241256 | MS.gene51837:intron | 20.0% |
| !! | GAAAGAAAACAAACTATTAA+AGG | - | chr7.4:28240698-28240717 | None:intergenic | 20.0% |
| !! | TTTATGCTTTACAAACTAAT+GGG | + | chr7.4:28240923-28240942 | MS.gene51837:CDS | 20.0% |
| !!! | AGTGTCTTTATTTGTAAAAT+AGG | - | chr7.4:28241974-28241993 | None:intergenic | 20.0% |
| !!! | ATAATTTAAAAGTGTCTCAA+AGG | + | chr7.4:28241175-28241194 | MS.gene51837:intron | 20.0% |
| !!! | ATATTTTGTAACTTCAAATC+CGG | - | chr7.4:28241149-28241168 | None:intergenic | 20.0% |
| !!! | ATGTCAATTCAATATCATTT+TGG | - | chr7.4:28241503-28241522 | None:intergenic | 20.0% |
| !!! | ATTATTTTGGTCATTTATGA+AGG | + | chr7.4:28240726-28240745 | MS.gene51837:intron | 20.0% |
| !!! | ATTTTTAATCTTCTCTTTTC+AGG | + | chr7.4:28241825-28241844 | MS.gene51837:intron | 20.0% |
| !!! | TAATTTTCCTTGATTATGTT+TGG | + | chr7.4:28242641-28242660 | MS.gene51837:intron | 20.0% |
| !!! | TGTCAATTCAATATCATTTT+GGG | - | chr7.4:28241502-28241521 | None:intergenic | 20.0% |
| !!! | TTTTACAAATAAAGACACTA+AGG | + | chr7.4:28241975-28241994 | MS.gene51837:intron | 20.0% |
| !!! | TTTTTAATCTTCTCTTTTCA+GGG | + | chr7.4:28241826-28241845 | MS.gene51837:intron | 20.0% |
| ! | AAAACATGAACCAAAGAAAA+AGG | - | chr7.4:28241748-28241767 | None:intergenic | 25.0% |
| ! | AAAATGTTCATAGTTTCAGA+TGG | + | chr7.4:28241524-28241543 | MS.gene51837:intron | 25.0% |
| ! | AATGAAACCGATATTGATAT+TGG | + | chr7.4:28240203-28240222 | MS.gene51837:CDS | 25.0% |
| ! | ACCTAATAATATGCTTCATA+TGG | - | chr7.4:28243102-28243121 | None:intergenic | 25.0% |
| ! | AGGTATTCCAATATCAATAT+CGG | - | chr7.4:28240213-28240232 | None:intergenic | 25.0% |
| ! | ATATACTTTACAGGTATGAT+TGG | + | chr7.4:28242518-28242537 | MS.gene51837:intron | 25.0% |
| ! | ATCCTTGTAACAAAAAAGTT+TGG | + | chr7.4:28242437-28242456 | MS.gene51837:intron | 25.0% |
| ! | CGAATAAATTTGACATGAAA+AGG | - | chr7.4:28240614-28240633 | None:intergenic | 25.0% |
| ! | GTAATTAATTATGCTTTCCT+TGG | + | chr7.4:28240335-28240354 | MS.gene51837:intron | 25.0% |
| ! | GTTAAATTGAAAATCTCACA+TGG | + | chr7.4:28242355-28242374 | MS.gene51837:intron | 25.0% |
| ! | GTTTATGCTTTACAAACTAA+TGG | + | chr7.4:28240922-28240941 | MS.gene51837:CDS | 25.0% |
| ! | TATAGATAATTTACCATTGC+AGG | + | chr7.4:28240793-28240812 | MS.gene51837:intron | 25.0% |
| ! | TATCGTTAAATAGATAACAC+TGG | - | chr7.4:28242918-28242937 | None:intergenic | 25.0% |
| ! | TTTACTAACCAAGTGTAAAT+GGG | - | chr7.4:28242777-28242796 | None:intergenic | 25.0% |
| ! | TTTGTATAGAATGGTAGTAA+CGG | - | chr7.4:28242135-28242154 | None:intergenic | 25.0% |
| !! | AATACATAACATTCTTTTCC+TGG | - | chr7.4:28242464-28242483 | None:intergenic | 25.0% |
| !! | AATTTGAAAACCAAAGTGTT+TGG | - | chr7.4:28241250-28241269 | None:intergenic | 25.0% |
| !! | AGGTATACATTCTTTTTACA+AGG | + | chr7.4:28241995-28242014 | MS.gene51837:intron | 25.0% |
| !! | ATACATTCTTTTTACAAGGT+TGG | + | chr7.4:28241999-28242018 | MS.gene51837:intron | 25.0% |
| !! | ATGCTATAGTTTTCAATGAT+AGG | + | chr7.4:28242604-28242623 | MS.gene51837:intron | 25.0% |
| !! | TTTTACTAACCAAGTGTAAA+TGG | - | chr7.4:28242778-28242797 | None:intergenic | 25.0% |
| !! | TTTTAGTAGCATTTTCGTTA+AGG | + | chr7.4:28242333-28242352 | MS.gene51837:CDS | 25.0% |
| !!! | AATTTTTTTAAATCTCCCTG+TGG | - | chr7.4:28240361-28240380 | None:intergenic | 25.0% |
| !!! | AGAAGTATTTTTATGGCTTA+TGG | + | chr7.4:28240494-28240513 | MS.gene51837:CDS | 25.0% |
| !!! | ATACATAGCTTTGAATTTGA+TGG | + | chr7.4:28242717-28242736 | MS.gene51837:CDS | 25.0% |
| !!! | ATGTTGCAGAAGTATTTTTA+TGG | + | chr7.4:28240487-28240506 | MS.gene51837:CDS | 25.0% |
| !!! | CTTCATTTTTTTACTCTTTC+TGG | + | chr7.4:28241917-28241936 | MS.gene51837:intron | 25.0% |
| !!! | CTTTCTGAGATGAATTATTT+TGG | + | chr7.4:28240713-28240732 | MS.gene51837:intron | 25.0% |
| !!! | TTACATTTTGATACCTAATC+TGG | + | chr7.4:28240384-28240403 | MS.gene51837:intron | 25.0% |
| !!! | TTTGATTTGTTATTGACTTC+AGG | - | chr7.4:28242864-28242883 | None:intergenic | 25.0% |
| AAACATTCTTGTGTATATGC+AGG | + | chr7.4:28243150-28243169 | MS.gene51837:intron | 30.0% | |
| AAGAAACATGGATAAGACTT+GGG | - | chr7.4:28243063-28243082 | None:intergenic | 30.0% | |
| ACTCTGTTGATATACTTTAC+AGG | + | chr7.4:28242509-28242528 | MS.gene51837:intron | 30.0% | |
| AGTTTGACCAAAGAAACAAT+GGG | - | chr7.4:28241725-28241744 | None:intergenic | 30.0% | |
| ATTTGACATGAAAAGGAACT+AGG | - | chr7.4:28240607-28240626 | None:intergenic | 30.0% | |
| CTATACAATGTCAACTTTAC+AGG | + | chr7.4:28241406-28241425 | MS.gene51837:intron | 30.0% | |
| CTGTAATCCAAACATAATCA+AGG | - | chr7.4:28242651-28242670 | None:intergenic | 30.0% | |
| CTTCTAAATATAGAGAATGC+TGG | + | chr7.4:28240830-28240849 | MS.gene51837:CDS | 30.0% | |
| GCCATATGAAGCATATTATT+AGG | + | chr7.4:28243098-28243117 | MS.gene51837:intron | 30.0% | |
| TAAGAAACATGGATAAGACT+TGG | - | chr7.4:28243064-28243083 | None:intergenic | 30.0% | |
| TAGTTAACATTAGTAGTCCA+AGG | - | chr7.4:28242391-28242410 | None:intergenic | 30.0% | |
| TATATACAAAACAAGTCCAC+AGG | + | chr7.4:28240275-28240294 | MS.gene51837:CDS | 30.0% | |
| TATATAGTCCCATTTACACT+TGG | + | chr7.4:28242766-28242785 | MS.gene51837:CDS | 30.0% | |
| TTATTCTTTGCATGCTTTCA+GGG | + | chr7.4:28241341-28241360 | MS.gene51837:intron | 30.0% | |
| TTTACAAACTAATGGGAAGA+TGG | + | chr7.4:28240930-28240949 | MS.gene51837:CDS | 30.0% | |
| TTTATTCTTTGCATGCTTTC+AGG | + | chr7.4:28241340-28241359 | MS.gene51837:intron | 30.0% | |
| TTTGAATAATCATCACCTTG+AGG | - | chr7.4:28241897-28241916 | None:intergenic | 30.0% | |
| ! | AACTTGAGATTTTATGGACA+AGG | + | chr7.4:28243205-28243224 | MS.gene51837:CDS | 30.0% |
| ! | ACTTGAGATTTTATGGACAA+GGG | + | chr7.4:28243206-28243225 | MS.gene51837:CDS | 30.0% |
| !! | AGGTGAGTTATTATTTTTCC+AGG | + | chr7.4:28240996-28241015 | MS.gene51837:intron | 30.0% |
| !! | AGTTATTATTTTTCCAGGCT+TGG | + | chr7.4:28241001-28241020 | MS.gene51837:intron | 30.0% |
| !! | ATAGCTTTGAATTTGATGGA+TGG | + | chr7.4:28242721-28242740 | MS.gene51837:CDS | 30.0% |
| !! | CTTTGGTTCATGTTTTATAC+TGG | + | chr7.4:28241752-28241771 | MS.gene51837:intron | 30.0% |
| !! | TAGCTTTGAATTTGATGGAT+GGG | + | chr7.4:28242722-28242741 | MS.gene51837:CDS | 30.0% |
| !!! | ATATTTTTTCAAGGCTTCAC+CGG | - | chr7.4:28240258-28240277 | None:intergenic | 30.0% |
| !!! | GAGAGTGTAGAGTTTTTTTA+GGG | - | chr7.4:28242180-28242199 | None:intergenic | 30.0% |
| !!! | GTCCAAACTTTTTTGTTACA+AGG | - | chr7.4:28242442-28242461 | None:intergenic | 30.0% |
| !!! | TGAGAGTGTAGAGTTTTTTT+AGG | - | chr7.4:28242181-28242200 | None:intergenic | 30.0% |
| !!! | TTTTTTACTCTTTCTGGCTA+TGG | + | chr7.4:28241923-28241942 | MS.gene51837:intron | 30.0% |
| !!! | TTTTTTGGAAATAAGCACCA+CGG | + | chr7.4:28240862-28240881 | MS.gene51837:CDS | 30.0% |
| AAGAATATCTTGACCAATCC+AGG | - | chr7.4:28241680-28241699 | None:intergenic | 35.0% | |
| AAGATGGTTCATTGATGTTC+TGG | + | chr7.4:28240946-28240965 | MS.gene51837:CDS | 35.0% | |
| AATAGATAACACTGGTGTAG+TGG | - | chr7.4:28242910-28242929 | None:intergenic | 35.0% | |
| ACCTGTAGATCAAAATCCAA+GGG | - | chr7.4:28242686-28242705 | None:intergenic | 35.0% | |
| ATAATCATCACCTTGAGGTT+TGG | - | chr7.4:28241892-28241911 | None:intergenic | 35.0% | |
| ATATGCTTCATATGGCATAG+TGG | - | chr7.4:28243094-28243113 | None:intergenic | 35.0% | |
| ATGTTTCACTTCTTGTGTGA+AGG | + | chr7.4:28240299-28240318 | MS.gene51837:intron | 35.0% | |
| CTATAGCATACCTAAACCAT+AGG | - | chr7.4:28242593-28242612 | None:intergenic | 35.0% | |
| CTTCCTATATGACATCTTCT+GGG | + | chr7.4:28242043-28242062 | MS.gene51837:CDS | 35.0% | |
| CTTCTTTCCCAATGACAAAA+AGG | - | chr7.4:28243178-28243197 | None:intergenic | 35.0% | |
| GAGTTTGACCAAAGAAACAA+TGG | - | chr7.4:28241726-28241745 | None:intergenic | 35.0% | |
| GTAACAAAAAAGTTTGGACC+AGG | + | chr7.4:28242443-28242462 | MS.gene51837:intron | 35.0% | |
| GTGGGATATAGTAAGAAACA+TGG | - | chr7.4:28243075-28243094 | None:intergenic | 35.0% | |
| TATGCTTCATATGGCATAGT+GGG | - | chr7.4:28243093-28243112 | None:intergenic | 35.0% | |
| TCAAAGCTATGTATGTGACA+AGG | - | chr7.4:28242711-28242730 | None:intergenic | 35.0% | |
| TCTTGACATTATGTTAGAGC+AGG | + | chr7.4:28241068-28241087 | MS.gene51837:intron | 35.0% | |
| TGAGCAAGAGAAGCTATTAA+AGG | + | chr7.4:28240578-28240597 | MS.gene51837:CDS | 35.0% | |
| TTAAAGGAATCTTCTGTGAG+AGG | - | chr7.4:28240682-28240701 | None:intergenic | 35.0% | |
| ! | AACGCTAGGATACCAAATTT+TGG | - | chr7.4:28241099-28241118 | None:intergenic | 35.0% |
| ! | CTTGAGATTTTATGGACAAG+GGG | + | chr7.4:28243207-28243226 | MS.gene51837:CDS | 35.0% |
| ! | GCTTATTTCCAAAAAAGCAC+TGG | - | chr7.4:28240858-28240877 | None:intergenic | 35.0% |
| ! | GGGTATCGCTTTGATAATTA+CGG | + | chr7.4:28241846-28241865 | MS.gene51837:intron | 35.0% |
| ! | TGGTCAAACTCCTTTTTCTT+TGG | + | chr7.4:28241735-28241754 | MS.gene51837:intron | 35.0% |
| ! | TTGAGATTTTATGGACAAGG+GGG | + | chr7.4:28243208-28243227 | MS.gene51837:CDS | 35.0% |
| ! | TTGCTTTCCCATTGTTTCTT+TGG | + | chr7.4:28241715-28241734 | MS.gene51837:intron | 35.0% |
| ! | TTTTTATGGCTTATGGCTGT+TGG | + | chr7.4:28240501-28240520 | MS.gene51837:CDS | 35.0% |
| !! | TATGTGAAAGTACCCTTCTT+CGG | + | chr7.4:28241568-28241587 | MS.gene51837:CDS | 35.0% |
| !!! | GTTTAGTGGTTTTAGTGTAG+CGG | - | chr7.4:28242989-28243008 | None:intergenic | 35.0% |
| AACTTCAAATCCGGACAGAA+AGG | - | chr7.4:28241140-28241159 | None:intergenic | 40.0% | |
| ACACCCAGAAGATGTCATAT+AGG | - | chr7.4:28242049-28242068 | None:intergenic | 40.0% | |
| ACAGTTTAAATCCTGTCCCT+TGG | + | chr7.4:28242667-28242686 | MS.gene51837:intron | 40.0% | |
| ATGGTTCATTGATGTTCTGG+TGG | + | chr7.4:28240949-28240968 | MS.gene51837:CDS | 40.0% | |
| CAAGAAGTGAAACATACCTG+TGG | - | chr7.4:28240294-28240313 | None:intergenic | 40.0% | |
| CAAGGATTTGATGTGCACTA+CGG | - | chr7.4:28242424-28242443 | None:intergenic | 40.0% | |
| CACATGGATCACTTATTCCT+TGG | + | chr7.4:28242371-28242390 | MS.gene51837:intron | 40.0% | |
| CCAGAAGATGTCATATAGGA+AGG | - | chr7.4:28242045-28242064 | None:intergenic | 40.0% | |
| CCTTCCTATATGACATCTTC+TGG | + | chr7.4:28242042-28242061 | MS.gene51837:CDS | 40.0% | |
| CTACACTCTCACTTCTTTAC+AGG | + | chr7.4:28242190-28242209 | MS.gene51837:intron | 40.0% | |
| GAAAATGCTACTAAAAGCCC+TGG | - | chr7.4:28242329-28242348 | None:intergenic | 40.0% | |
| GACCTGTAGATCAAAATCCA+AGG | - | chr7.4:28242687-28242706 | None:intergenic | 40.0% | |
| GACTTGGGATAAGTTTCACA+AGG | - | chr7.4:28243048-28243067 | None:intergenic | 40.0% | |
| GATGATCCTCTTTGATGTGA+GGG | - | chr7.4:28243251-28243270 | None:intergenic | 40.0% | |
| GCAAGACACAAAACCAGATT+AGG | - | chr7.4:28240400-28240419 | None:intergenic | 40.0% | |
| TAATCATCAAGAACCAAGCC+TGG | - | chr7.4:28241017-28241036 | None:intergenic | 40.0% | |
| TAGATCAAAATCCAAGGGAC+AGG | - | chr7.4:28242681-28242700 | None:intergenic | 40.0% | |
| TCATCTGAATCATCCTGCAA+TGG | - | chr7.4:28240809-28240828 | None:intergenic | 40.0% | |
| TGATGATCCTCTTTGATGTG+AGG | - | chr7.4:28243252-28243271 | None:intergenic | 40.0% | |
| TGTCCAAATACCAAACCTCA+AGG | + | chr7.4:28241879-28241898 | MS.gene51837:CDS | 40.0% | |
| TTGTCATTGGGAAAGAAGAG+AGG | + | chr7.4:28243180-28243199 | MS.gene51837:CDS | 40.0% | |
| ! | CTTTTTGCGTAGTCAAACAG+CGG | - | chr7.4:28243023-28243042 | None:intergenic | 40.0% |
| ! | GAGGCGAACTTGAGATTTTA+TGG | + | chr7.4:28243199-28243218 | MS.gene51837:CDS | 40.0% |
| ! | GCAGGAACCTTTTTGTCATT+GGG | + | chr7.4:28243168-28243187 | MS.gene51837:intron | 40.0% |
| ! | TCACCTTGAGGTTTGGTATT+TGG | - | chr7.4:28241885-28241904 | None:intergenic | 40.0% |
| ! | TCGGGGACATAATTTTACCA+GGG | + | chr7.4:28242309-28242328 | MS.gene51837:CDS | 40.0% |
| ! | TGCAGGAACCTTTTTGTCAT+TGG | + | chr7.4:28243167-28243186 | MS.gene51837:intron | 40.0% |
| ! | TTCGGGGACATAATTTTACC+AGG | + | chr7.4:28242308-28242327 | MS.gene51837:CDS | 40.0% |
| ! | TTGAATTTGATGGATGGGCA+TGG | + | chr7.4:28242727-28242746 | MS.gene51837:CDS | 40.0% |
| !! | ACTCTTTCTGGCTATGGATA+TGG | + | chr7.4:28241929-28241948 | MS.gene51837:intron | 40.0% |
| !! | AGCAAATGGCTCTAAAGTCA+TGG | + | chr7.4:28241286-28241305 | MS.gene51837:intron | 40.0% |
| !! | CTGGTGGTTCTGTTTTGTAT+TGG | + | chr7.4:28240965-28240984 | MS.gene51837:CDS | 40.0% |
| !! | GACTTTAGAGCCATTTGCTA+TGG | - | chr7.4:28241285-28241304 | None:intergenic | 40.0% |
| !! | GCAAATGGCTCTAAAGTCAT+GGG | + | chr7.4:28241287-28241306 | MS.gene51837:intron | 40.0% |
| !! | GTGGTTCTGTTTTGTATTGG+TGG | + | chr7.4:28240968-28240987 | MS.gene51837:CDS | 40.0% |
| !! | TCCCTTGGATTTTGATCTAC+AGG | + | chr7.4:28242682-28242701 | MS.gene51837:intron | 40.0% |
| !!! | GTTTTGTATTGGTGGTGTTG+AGG | + | chr7.4:28240976-28240995 | MS.gene51837:CDS | 40.0% |
| ACAGCGAATGCTATGCAGAA+GGG | - | chr7.4:28241625-28241644 | None:intergenic | 45.0% | |
| ACCGCGTTTATTCGATCCTT+GGG | + | chr7.4:28242265-28242284 | MS.gene51837:CDS | 45.0% | |
| ACGATGAGTGCCTATGGTTT+AGG | + | chr7.4:28242580-28242599 | MS.gene51837:CDS | 45.0% | |
| ACTTCTTTACAGGTAGCTCG+CGG | + | chr7.4:28242200-28242219 | MS.gene51837:intron | 45.0% | |
| ATAGCATTCGCTGTGGTTTG+GGG | + | chr7.4:28241631-28241650 | MS.gene51837:CDS | 45.0% | |
| ATTATGCTTTCCTTGGCCAC+AGG | + | chr7.4:28240342-28240361 | MS.gene51837:intron | 45.0% | |
| CAATCCAGGCATACGATACA+CGG | - | chr7.4:28241666-28241685 | None:intergenic | 45.0% | |
| CACATTAGTGCCTTTCTGTC+CGG | + | chr7.4:28241127-28241146 | MS.gene51837:intron | 45.0% | |
| CATAGCATTCGCTGTGGTTT+GGG | + | chr7.4:28241630-28241649 | MS.gene51837:CDS | 45.0% | |
| CCACTATCATCACACTCTCA+TGG | - | chr7.4:28242091-28242110 | None:intergenic | 45.0% | |
| CCATTCTCTGTGCTTCTTAC+TGG | + | chr7.4:28240526-28240545 | MS.gene51837:CDS | 45.0% | |
| GAGCAGGCTACACCAAAATT+TGG | + | chr7.4:28241084-28241103 | MS.gene51837:intron | 45.0% | |
| GGGACTATATACAGCAAAGC+TGG | - | chr7.4:28242757-28242776 | None:intergenic | 45.0% | |
| GGTGATAAGAGTGGAGAAGA+TGG | + | chr7.4:28242221-28242240 | MS.gene51837:CDS | 45.0% | |
| GTCCTGTCATCCATAGCAAA+TGG | + | chr7.4:28241272-28241291 | MS.gene51837:intron | 45.0% | |
| TACCGCGTTTATTCGATCCT+TGG | + | chr7.4:28242264-28242283 | MS.gene51837:CDS | 45.0% | |
| TTATGCTTTCCTTGGCCACA+GGG | + | chr7.4:28240343-28240362 | MS.gene51837:intron | 45.0% | |
| TTCGAGCAGGATACTTCTTG+TGG | + | chr7.4:28242557-28242576 | MS.gene51837:CDS | 45.0% | |
| TTGCTCAATAACACCCTCTC+TGG | - | chr7.4:28240565-28240584 | None:intergenic | 45.0% | |
| TTGGTATCCTAGCGTTCAGA+CGG | + | chr7.4:28241103-28241122 | MS.gene51837:intron | 45.0% | |
| TTTAAATCTCCCTGTGGCCA+AGG | - | chr7.4:28240355-28240374 | None:intergenic | 45.0% | |
| ! | ATGTGAAACAGCACCGAAGA+AGG | - | chr7.4:28241584-28241603 | None:intergenic | 45.0% |
| ! | CCAGTAAGAAGCACAGAGAA+TGG | - | chr7.4:28240529-28240548 | None:intergenic | 45.0% |
| ! | CCATGAGAGTGTGATGATAG+TGG | + | chr7.4:28242088-28242107 | MS.gene51837:CDS | 45.0% |
| ! | TGTGAAACAGCACCGAAGAA+GGG | - | chr7.4:28241583-28241602 | None:intergenic | 45.0% |
| !! | ACAAGAAGTATCCTGCTCGA+AGG | - | chr7.4:28242558-28242577 | None:intergenic | 45.0% |
| !! | AGCCATTTGCTATGGATGAC+AGG | - | chr7.4:28241277-28241296 | None:intergenic | 45.0% |
| !! | ATGTGAGGGCAAGGCATTTT+TGG | - | chr7.4:28243237-28243256 | None:intergenic | 45.0% |
| !! | GGTTACAGTGTCATCGGTTT+CGG | + | chr7.4:28242290-28242309 | MS.gene51837:CDS | 45.0% |
| !! | GTTACAGTGTCATCGGTTTC+GGG | + | chr7.4:28242291-28242310 | MS.gene51837:CDS | 45.0% |
| !! | TTACAGTGTCATCGGTTTCG+GGG | + | chr7.4:28242292-28242311 | MS.gene51837:CDS | 45.0% |
| !!! | TGCTGGTTCCAGTGCTTTTT+TGG | + | chr7.4:28240847-28240866 | MS.gene51837:CDS | 45.0% |
| AATGTGTCCGTCTGAACGCT+AGG | - | chr7.4:28241113-28241132 | None:intergenic | 50.0% | |
| ACTTCTGCAACATCGACCTG+TGG | - | chr7.4:28240480-28240499 | None:intergenic | 50.0% | |
| AGCGAATGCTATGCAGAAGG+GGG | - | chr7.4:28241623-28241642 | None:intergenic | 50.0% | |
| ATGACACTGTAACCACCCCA+AGG | - | chr7.4:28242284-28242303 | None:intergenic | 50.0% | |
| CACAGCGAATGCTATGCAGA+AGG | - | chr7.4:28241626-28241645 | None:intergenic | 50.0% | |
| CAGCGAATGCTATGCAGAAG+GGG | - | chr7.4:28241624-28241643 | None:intergenic | 50.0% | |
| CCCCAAGGATCGAATAAACG+CGG | - | chr7.4:28242269-28242288 | None:intergenic | 50.0% | |
| CCGCGTTTATTCGATCCTTG+GGG | + | chr7.4:28242266-28242285 | MS.gene51837:CDS | 50.0% | |
| CGGCTATCACAGTGGTTTAG+TGG | - | chr7.4:28243003-28243022 | None:intergenic | 50.0% | |
| CGTGTATCGTATGCCTGGAT+TGG | + | chr7.4:28241664-28241683 | MS.gene51837:CDS | 50.0% | |
| CGTTTATTCGATCCTTGGGG+TGG | + | chr7.4:28242269-28242288 | MS.gene51837:CDS | 50.0% | |
| CTTCTGCATAGCATTCGCTG+TGG | + | chr7.4:28241624-28241643 | MS.gene51837:CDS | 50.0% | |
| GCATAGCATTCGCTGTGGTT+TGG | + | chr7.4:28241629-28241648 | MS.gene51837:CDS | 50.0% | |
| TCAAACAGCGGCTATCACAG+TGG | - | chr7.4:28243011-28243030 | None:intergenic | 50.0% | |
| TCCTCTTTGATGTGAGGGCA+AGG | - | chr7.4:28243246-28243265 | None:intergenic | 50.0% | |
| TCTTCTGTGAGAGGACTGTG+AGG | - | chr7.4:28240673-28240692 | None:intergenic | 50.0% | |
| TGGGGTGGTTACAGTGTCAT+CGG | + | chr7.4:28242284-28242303 | MS.gene51837:CDS | 50.0% | |
| TTGTGGACGATGAGTGCCTA+TGG | + | chr7.4:28242574-28242593 | MS.gene51837:CDS | 50.0% | |
| ! | GGGACTGCAAACTTGCTTAG+TGG | + | chr7.4:28241361-28241380 | MS.gene51837:intron | 50.0% |
| ! | GGTATGATTGGCTAGCGAAG+AGG | + | chr7.4:28242530-28242549 | MS.gene51837:intron | 50.0% |
| !! | AACGAATGAAAGTGCTGCCG+TGG | - | chr7.4:28240882-28240901 | None:intergenic | 50.0% |
| AACGCCGTGTATCGTATGCC+TGG | + | chr7.4:28241659-28241678 | MS.gene51837:CDS | 55.0% | |
| ACCTGCTGTCATGCTTCCAC+TGG | + | chr7.4:28240229-28240248 | MS.gene51837:CDS | 55.0% | |
| ACGCGGTATCTTGAGCAGCA+TGG | - | chr7.4:28242252-28242271 | None:intergenic | 55.0% | |
| ATACTCTCCACGACGTCCAC+AGG | + | chr7.4:28240461-28240480 | MS.gene51837:CDS | 55.0% | |
| CGCGGTATCTTGAGCAGCAT+GGG | - | chr7.4:28242251-28242270 | None:intergenic | 55.0% | |
| GCCTTGCCCTCACATCAAAG+AGG | + | chr7.4:28243242-28243261 | MS.gene51837:CDS | 55.0% | |
| GCGGTATCTTGAGCAGCATG+GGG | - | chr7.4:28242250-28242269 | None:intergenic | 55.0% | |
| GTAGCTCGCGGTGATAAGAG+TGG | + | chr7.4:28242212-28242231 | MS.gene51837:CDS | 55.0% | |
| GTCATGCTTCCACTGGATGC+CGG | + | chr7.4:28240236-28240255 | MS.gene51837:CDS | 55.0% | |
| ! | GTGCTTCTTACTGGTCTGCC+TGG | + | chr7.4:28240535-28240554 | MS.gene51837:CDS | 55.0% |
| ! | TCCAGTGGAAGCATGACAGC+AGG | - | chr7.4:28240233-28240252 | None:intergenic | 55.0% |
| AACACCCTCTCTGGCAGTCC+AGG | - | chr7.4:28240556-28240575 | None:intergenic | 60.0% | |
| AAGGCTTCACCGGCATCCAG+TGG | - | chr7.4:28240248-28240267 | None:intergenic | 60.0% | |
| ACATCGACCTGTGGACGTCG+TGG | - | chr7.4:28240471-28240490 | None:intergenic | 60.0% | |
| GCGAAGAGGAACCTTCGAGC+AGG | + | chr7.4:28242544-28242563 | MS.gene51837:CDS | 60.0% | |
| TCTGCCTGGACTGCCAGAGA+GGG | + | chr7.4:28240549-28240568 | MS.gene51837:CDS | 60.0% | |
| GTCTGCCTGGACTGCCAGAG+AGG | + | chr7.4:28240548-28240567 | MS.gene51837:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 28240180 | 28243287 | 28240180 | ID=MS.gene51837 |
| chr7.4 | mRNA | 28240180 | 28243287 | 28240180 | ID=MS.gene51837.t1;Parent=MS.gene51837 |
| chr7.4 | exon | 28240180 | 28240296 | 28240180 | ID=MS.gene51837.t1.exon1;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28240180 | 28240296 | 28240180 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28240448 | 28240599 | 28240448 | ID=MS.gene51837.t1.exon2;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28240448 | 28240599 | 28240448 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28240815 | 28240997 | 28240815 | ID=MS.gene51837.t1.exon3;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28240815 | 28240997 | 28240815 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28241362 | 28241396 | 28241362 | ID=MS.gene51837.t1.exon4;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28241362 | 28241396 | 28241362 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28241537 | 28241699 | 28241537 | ID=MS.gene51837.t1.exon5;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28241537 | 28241699 | 28241537 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28241847 | 28241900 | 28241847 | ID=MS.gene51837.t1.exon6;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28241847 | 28241900 | 28241847 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28242017 | 28242109 | 28242017 | ID=MS.gene51837.t1.exon7;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28242017 | 28242109 | 28242017 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28242212 | 28242354 | 28242212 | ID=MS.gene51837.t1.exon8;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28242212 | 28242354 | 28242212 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28242531 | 28242601 | 28242531 | ID=MS.gene51837.t1.exon9;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28242531 | 28242601 | 28242531 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28242704 | 28242787 | 28242704 | ID=MS.gene51837.t1.exon10;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28242704 | 28242787 | 28242704 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| chr7.4 | exon | 28243172 | 28243287 | 28243172 | ID=MS.gene51837.t1.exon11;Parent=MS.gene51837.t1 |
| chr7.4 | CDS | 28243172 | 28243287 | 28243172 | ID=cds.MS.gene51837.t1;Parent=MS.gene51837.t1 |
| Gene Sequence |
| Protein sequence |
