Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21116.t1 | XP_013469123.1 | 96.4 | 251 | 9 | 0 | 1 | 251 | 1 | 251 | 3.40E-134 | 487.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21116.t1 | Q41651 | 79.4 | 253 | 45 | 2 | 1 | 251 | 1 | 248 | 7.1e-109 | 394.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21116.t1 | A0A072VNE4 | 96.4 | 251 | 9 | 0 | 1 | 251 | 1 | 251 | 2.4e-134 | 487.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene21116 | 0.818039 | 2.41E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene21116 | 0.851016 | 1.17E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene21116 | 0.828137 | 1.06E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene21116 | 0.845496 | 3.92E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene21116 | 0.845354 | 4.28E-59 | -1.69E-46 |
| MS.gene049351 | MS.gene21116 | 0.824734 | 6.88E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene21116 | 0.838369 | 3.00E-57 | -1.69E-46 |
| MS.gene049425 | MS.gene21116 | -0.810208 | 1.29E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene21116 | 0.858472 | 8.05E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene21116 | 0.824801 | 6.63E-54 | -1.69E-46 |
| MS.gene049614 | MS.gene21116 | 0.841387 | 4.90E-58 | -1.69E-46 |
| MS.gene049615 | MS.gene21116 | 0.807181 | 5.73E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene21116 | 0.832642 | 8.41E-56 | -1.69E-46 |
| MS.gene049662 | MS.gene21116 | 0.824841 | 6.49E-54 | -1.69E-46 |
| MS.gene049760 | MS.gene21116 | 0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene21116 | 0.857036 | 2.15E-62 | -1.69E-46 |
| MS.gene049828 | MS.gene21116 | 0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene21116 | 0.837391 | 5.34E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene21116 | 0.847667 | 1.00E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene21116 | 0.834865 | 2.34E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene21116 | 0.870174 | 1.78E-66 | -1.69E-46 |
| MS.gene050397 | MS.gene21116 | 0.819486 | 1.13E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene21116 | 0.851355 | 9.37E-61 | -1.69E-46 |
| MS.gene050444 | MS.gene21116 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene21116 | 0.800457 | 1.43E-48 | -1.69E-46 |
| MS.gene050518 | MS.gene21116 | 0.82936 | 5.38E-55 | -1.69E-46 |
| MS.gene050520 | MS.gene21116 | 0.806985 | 6.30E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene21116 | 0.808525 | 2.97E-50 | -1.69E-46 |
| MS.gene05053 | MS.gene21116 | 0.805566 | 1.25E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene21116 | 0.831343 | 1.76E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene21116 | 0.826668 | 2.39E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene21116 | 0.82076 | 5.79E-53 | -1.69E-46 |
| MS.gene050686 | MS.gene21116 | 0.804399 | 2.20E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene21116 | 0.811231 | 7.76E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene21116 | 0.808842 | 2.54E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene21116 | 0.90378 | 2.44E-79 | -1.69E-46 |
| MS.gene050770 | MS.gene21116 | 0.905139 | 5.89E-80 | -1.69E-46 |
| MS.gene050772 | MS.gene21116 | 0.874109 | 8.73E-68 | -1.69E-46 |
| MS.gene05079 | MS.gene21116 | -0.808237 | 3.42E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene21116 | 0.804742 | 1.87E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene21116 | 0.840491 | 8.42E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene21116 | 0.829009 | 6.54E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene21116 | 0.82855 | 8.45E-55 | -1.69E-46 |
| MS.gene051228 | MS.gene21116 | 0.889837 | 1.69E-73 | -1.69E-46 |
| MS.gene051387 | MS.gene21116 | 0.829979 | 3.80E-55 | -1.69E-46 |
| MS.gene051434 | MS.gene21116 | 0.804581 | 2.02E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene21116 | 0.827063 | 1.92E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene21116 | 0.857953 | 1.15E-62 | -1.69E-46 |
| MS.gene051692 | MS.gene21116 | 0.806212 | 9.18E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene21116 | 0.816647 | 4.97E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene21116 | 0.84274 | 2.15E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene21116 | 0.846027 | 2.81E-59 | -1.69E-46 |
| MS.gene051949 | MS.gene21116 | 0.822168 | 2.74E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene21116 | 0.848442 | 6.11E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene21116 | 0.874716 | 5.44E-68 | -1.69E-46 |
| MS.gene052290 | MS.gene21116 | 0.863437 | 2.49E-64 | -1.69E-46 |
| MS.gene052310 | MS.gene21116 | 0.845525 | 3.85E-59 | -1.69E-46 |
| MS.gene052322 | MS.gene21116 | 0.810716 | 1.00E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene21116 | 0.825511 | 4.50E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene21116 | 0.871851 | 4.99E-67 | -1.69E-46 |
| MS.gene052421 | MS.gene21116 | 0.826724 | 2.32E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene21116 | 0.82096 | 5.20E-53 | -1.69E-46 |
| MS.gene052510 | MS.gene21116 | 0.80714 | 5.85E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene21116 | 0.828448 | 8.94E-55 | -1.69E-46 |
| MS.gene052805 | MS.gene21116 | -0.804147 | 2.48E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene21116 | 0.82047 | 6.74E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene21116 | 0.81306 | 3.10E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene21116 | 0.850376 | 1.77E-60 | -1.69E-46 |
| MS.gene053009 | MS.gene21116 | 0.883268 | 5.18E-71 | -1.69E-46 |
| MS.gene053103 | MS.gene21116 | 0.845524 | 3.85E-59 | -1.69E-46 |
| MS.gene053104 | MS.gene21116 | 0.866273 | 3.22E-65 | -1.69E-46 |
| MS.gene053107 | MS.gene21116 | 0.822476 | 2.32E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene21116 | 0.827229 | 1.76E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene21116 | 0.821232 | 4.50E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene21116 | 0.855605 | 5.64E-62 | -1.69E-46 |
| MS.gene053286 | MS.gene21116 | 0.84309 | 1.74E-58 | -1.69E-46 |
| MS.gene053322 | MS.gene21116 | 0.895572 | 8.44E-76 | -1.69E-46 |
| MS.gene053384 | MS.gene21116 | 0.859052 | 5.40E-63 | -1.69E-46 |
| MS.gene053449 | MS.gene21116 | 0.816701 | 4.83E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene21116 | 0.808727 | 2.69E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene21116 | 0.836809 | 7.53E-57 | -1.69E-46 |
| MS.gene053813 | MS.gene21116 | 0.823082 | 1.68E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene21116 | 0.857565 | 1.50E-62 | -1.69E-46 |
| MS.gene054123 | MS.gene21116 | 0.821313 | 4.31E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene21116 | 0.895401 | 9.93E-76 | -1.69E-46 |
| MS.gene054543 | MS.gene21116 | 0.814079 | 1.85E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene21116 | 0.819158 | 1.35E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene21116 | 0.868645 | 5.60E-66 | -1.69E-46 |
| MS.gene054802 | MS.gene21116 | 0.895698 | 7.49E-76 | -1.69E-46 |
| MS.gene054803 | MS.gene21116 | 0.892641 | 1.32E-74 | -1.69E-46 |
| MS.gene054804 | MS.gene21116 | 0.898436 | 5.32E-77 | -1.69E-46 |
| MS.gene054955 | MS.gene21116 | 0.827176 | 1.81E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene21116 | 0.865168 | 7.18E-65 | -1.69E-46 |
| MS.gene055206 | MS.gene21116 | 0.835488 | 1.63E-56 | -1.69E-46 |
| MS.gene055212 | MS.gene21116 | 0.814772 | 1.30E-51 | -1.69E-46 |
| MS.gene055254 | MS.gene21116 | 0.881569 | 2.15E-70 | -1.69E-46 |
| MS.gene055277 | MS.gene21116 | 0.849291 | 3.55E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene21116 | 0.825197 | 5.34E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene21116 | 0.801652 | 8.14E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene21116 | 0.904622 | 1.01E-79 | -1.69E-46 |
| MS.gene055412 | MS.gene21116 | 0.823031 | 1.72E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene21116 | 0.804565 | 2.03E-49 | -1.69E-46 |
| MS.gene055497 | MS.gene21116 | -0.823702 | 1.20E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene21116 | 0.892693 | 1.25E-74 | -1.69E-46 |
| MS.gene055502 | MS.gene21116 | 0.814729 | 1.33E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene21116 | 0.804203 | 2.42E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene21116 | 0.867526 | 1.28E-65 | -1.69E-46 |
| MS.gene055638 | MS.gene21116 | 0.858505 | 7.87E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene21116 | 0.859747 | 3.34E-63 | -1.69E-46 |
| MS.gene055722 | MS.gene21116 | 0.847776 | 9.34E-60 | -1.69E-46 |
| MS.gene055896 | MS.gene21116 | 0.853094 | 3.00E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene21116 | 0.902388 | 1.02E-78 | -1.69E-46 |
| MS.gene055941 | MS.gene21116 | 0.825298 | 5.06E-54 | -1.69E-46 |
| MS.gene055956 | MS.gene21116 | -0.838057 | 3.60E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene21116 | 0.814996 | 1.16E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene21116 | 0.855364 | 6.63E-62 | -1.69E-46 |
| MS.gene056407 | MS.gene21116 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene21116 | 0.836662 | 8.21E-57 | -1.69E-46 |
| MS.gene056487 | MS.gene21116 | 0.834919 | 2.27E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene21116 | 0.809355 | 1.97E-50 | -1.69E-46 |
| MS.gene056549 | MS.gene21116 | 0.810288 | 1.24E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene21116 | 0.874062 | 9.06E-68 | -1.69E-46 |
| MS.gene05664 | MS.gene21116 | 0.810131 | 1.34E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene21116 | 0.857483 | 1.58E-62 | -1.69E-46 |
| MS.gene056796 | MS.gene21116 | 0.809113 | 2.22E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene21116 | 0.817395 | 3.37E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene21116 | 0.861817 | 7.86E-64 | -1.69E-46 |
| MS.gene057123 | MS.gene21116 | 0.820783 | 5.72E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene21116 | 0.908025 | 2.68E-81 | -1.69E-46 |
| MS.gene057146 | MS.gene21116 | 0.843276 | 1.55E-58 | -1.69E-46 |
| MS.gene057246 | MS.gene21116 | 0.840977 | 6.28E-58 | -1.69E-46 |
| MS.gene057295 | MS.gene21116 | 0.837933 | 3.88E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene21116 | 0.868771 | 5.10E-66 | -1.69E-46 |
| MS.gene05735 | MS.gene21116 | 0.844958 | 5.48E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene21116 | 0.873409 | 1.50E-67 | -1.69E-46 |
| MS.gene057926 | MS.gene21116 | 0.842286 | 2.84E-58 | -1.69E-46 |
| MS.gene057927 | MS.gene21116 | 0.816362 | 5.75E-52 | -1.69E-46 |
| MS.gene058006 | MS.gene21116 | 0.827504 | 1.51E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene21116 | 0.845192 | 4.73E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene21116 | 0.813768 | 2.17E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene21116 | 0.864806 | 9.33E-65 | -1.69E-46 |
| MS.gene058323 | MS.gene21116 | 0.860613 | 1.83E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene21116 | 0.842189 | 3.01E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene21116 | 0.863009 | 3.38E-64 | -1.69E-46 |
| MS.gene058723 | MS.gene21116 | 0.858519 | 7.79E-63 | -1.69E-46 |
| MS.gene058773 | MS.gene21116 | 0.83886 | 2.24E-57 | -1.69E-46 |
| MS.gene058903 | MS.gene21116 | 0.837841 | 4.10E-57 | -1.69E-46 |
| MS.gene058928 | MS.gene21116 | 0.815597 | 8.52E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene21116 | 0.824495 | 7.82E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene21116 | 0.806788 | 6.94E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene21116 | 0.857791 | 1.28E-62 | -1.69E-46 |
| MS.gene05913 | MS.gene21116 | 0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene059305 | MS.gene21116 | 0.802429 | 5.63E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene21116 | 0.856306 | 3.52E-62 | -1.69E-46 |
| MS.gene05934 | MS.gene21116 | 0.84138 | 4.92E-58 | -1.69E-46 |
| MS.gene059536 | MS.gene21116 | 0.867977 | 9.19E-66 | -1.69E-46 |
| MS.gene059597 | MS.gene21116 | 0.803249 | 3.82E-49 | -1.69E-46 |
| MS.gene05959 | MS.gene21116 | 0.832733 | 7.99E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene21116 | 0.847607 | 1.04E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene21116 | 0.835893 | 1.29E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene21116 | 0.829108 | 6.19E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene21116 | 0.832951 | 7.05E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene21116 | 0.831251 | 1.86E-55 | -1.69E-46 |
| MS.gene059708 | MS.gene21116 | 0.808521 | 2.97E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene21116 | 0.83569 | 1.45E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene21116 | 0.839533 | 1.50E-57 | -1.69E-46 |
| MS.gene059858 | MS.gene21116 | 0.818915 | 1.53E-52 | -1.69E-46 |
| MS.gene05986 | MS.gene21116 | 0.812682 | 3.75E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene21116 | 0.847282 | 1.28E-59 | -1.69E-46 |
| MS.gene059960 | MS.gene21116 | 0.93175 | 2.38E-94 | -1.69E-46 |
| MS.gene059974 | MS.gene21116 | 0.812024 | 5.22E-51 | -1.69E-46 |
| MS.gene060005 | MS.gene21116 | 0.810007 | 1.43E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene21116 | 0.852347 | 4.90E-61 | -1.69E-46 |
| MS.gene060762 | MS.gene21116 | 0.800536 | 1.38E-48 | -1.69E-46 |
| MS.gene060804 | MS.gene21116 | 0.884616 | 1.65E-71 | -1.69E-46 |
| MS.gene060818 | MS.gene21116 | 0.894651 | 2.02E-75 | -1.69E-46 |
| MS.gene060835 | MS.gene21116 | 0.808701 | 2.72E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene21116 | 0.807514 | 4.87E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene21116 | 0.821532 | 3.84E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene21116 | 0.884065 | 2.64E-71 | -1.69E-46 |
| MS.gene061051 | MS.gene21116 | -0.842398 | 2.65E-58 | -1.69E-46 |
| MS.gene061134 | MS.gene21116 | 0.841303 | 5.16E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene21116 | 0.838466 | 2.83E-57 | -1.69E-46 |
| MS.gene061171 | MS.gene21116 | 0.812474 | 4.16E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene21116 | 0.918887 | 8.94E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21116.t1 | MTR_1g085560 | 96.414 | 251 | 9 | 0 | 1 | 251 | 1 | 251 | 0.0 | 502 |
| MS.gene21116.t1 | MTR_7g110980 | 69.261 | 257 | 72 | 5 | 1 | 251 | 6 | 261 | 6.56e-118 | 337 |
| MS.gene21116.t1 | MTR_1g117010 | 64.677 | 201 | 63 | 3 | 52 | 249 | 48 | 243 | 5.83e-88 | 261 |
| MS.gene21116.t1 | MTR_1g117010 | 64.677 | 201 | 63 | 3 | 52 | 249 | 48 | 243 | 5.83e-88 | 261 |
| MS.gene21116.t1 | MTR_3g463900 | 65.574 | 183 | 54 | 2 | 74 | 249 | 23 | 203 | 1.80e-78 | 235 |
| MS.gene21116.t1 | MTR_3g070500 | 64.407 | 177 | 53 | 3 | 78 | 247 | 58 | 231 | 1.83e-73 | 224 |
| MS.gene21116.t1 | MTR_4g075290 | 65.101 | 149 | 45 | 1 | 83 | 224 | 2 | 150 | 8.47e-69 | 209 |
| MS.gene21116.t1 | MTR_7g116340 | 67.808 | 146 | 40 | 1 | 86 | 224 | 5 | 150 | 9.87e-69 | 209 |
| MS.gene21116.t1 | MTR_3g117750 | 66.438 | 146 | 42 | 1 | 86 | 224 | 13 | 158 | 2.89e-67 | 206 |
| MS.gene21116.t1 | MTR_8g040180 | 58.683 | 167 | 62 | 3 | 87 | 247 | 20 | 185 | 8.64e-63 | 195 |
| MS.gene21116.t1 | MTR_7g095750 | 60.355 | 169 | 57 | 2 | 87 | 247 | 9 | 175 | 8.80e-62 | 205 |
| MS.gene21116.t1 | MTR_4g073650 | 53.191 | 188 | 76 | 3 | 72 | 248 | 29 | 215 | 1.00e-60 | 191 |
| MS.gene21116.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 85 | 248 | 4 | 174 | 5.72e-60 | 193 |
| MS.gene21116.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 85 | 248 | 4 | 174 | 6.37e-60 | 192 |
| MS.gene21116.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 85 | 248 | 4 | 174 | 8.90e-60 | 192 |
| MS.gene21116.t1 | MTR_8g079690 | 57.647 | 170 | 63 | 2 | 86 | 247 | 5 | 173 | 9.04e-60 | 193 |
| MS.gene21116.t1 | MTR_3g070500 | 68.939 | 132 | 33 | 2 | 78 | 202 | 58 | 188 | 4.34e-57 | 180 |
| MS.gene21116.t1 | MTR_3g070500 | 68.224 | 107 | 26 | 2 | 78 | 177 | 58 | 163 | 3.21e-42 | 142 |
| MS.gene21116.t1 | MTR_1g011980 | 46.961 | 181 | 85 | 3 | 79 | 251 | 1 | 178 | 4.04e-42 | 152 |
| MS.gene21116.t1 | MTR_3g070500 | 67.925 | 106 | 26 | 2 | 78 | 176 | 58 | 162 | 9.14e-42 | 140 |
| MS.gene21116.t1 | MTR_3g107660 | 47.977 | 173 | 80 | 2 | 87 | 251 | 12 | 182 | 4.74e-41 | 150 |
| MS.gene21116.t1 | MTR_2g085075 | 52.288 | 153 | 67 | 5 | 92 | 243 | 464 | 611 | 2.29e-40 | 147 |
| MS.gene21116.t1 | MTR_7g105220 | 49.664 | 149 | 69 | 5 | 97 | 244 | 17 | 160 | 3.99e-40 | 136 |
| MS.gene21116.t1 | MTR_3g085705 | 61.290 | 93 | 32 | 2 | 137 | 229 | 32 | 120 | 3.40e-34 | 120 |
| MS.gene21116.t1 | MTR_8g036015 | 50.345 | 145 | 64 | 5 | 99 | 241 | 10 | 148 | 1.42e-32 | 117 |
| MS.gene21116.t1 | MTR_5g015500 | 46.528 | 144 | 71 | 5 | 99 | 241 | 314 | 452 | 1.10e-28 | 114 |
| MS.gene21116.t1 | MTR_5g015500 | 46.207 | 145 | 72 | 5 | 99 | 242 | 354 | 493 | 1.73e-28 | 113 |
| MS.gene21116.t1 | MTR_2g023120 | 44.872 | 156 | 74 | 8 | 92 | 242 | 15 | 163 | 5.24e-22 | 94.7 |
| MS.gene21116.t1 | MTR_6g084140 | 37.500 | 168 | 83 | 9 | 97 | 250 | 8 | 167 | 9.83e-17 | 79.7 |
| MS.gene21116.t1 | MTR_6g084140 | 37.500 | 168 | 83 | 9 | 97 | 250 | 25 | 184 | 1.05e-16 | 79.3 |
| MS.gene21116.t1 | MTR_8g442420 | 36.905 | 168 | 84 | 9 | 97 | 250 | 8 | 167 | 1.35e-15 | 76.3 |
| MS.gene21116.t1 | MTR_2g461260 | 29.032 | 155 | 89 | 6 | 99 | 234 | 92 | 244 | 1.38e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21116.t1 | AT3G62030 | 61.742 | 264 | 81 | 7 | 1 | 250 | 1 | 258 | 1.09e-104 | 304 |
| MS.gene21116.t1 | AT3G62030 | 61.509 | 265 | 81 | 7 | 1 | 250 | 1 | 259 | 1.63e-104 | 303 |
| MS.gene21116.t1 | AT3G62030 | 69.907 | 216 | 56 | 4 | 42 | 251 | 101 | 313 | 2.36e-103 | 303 |
| MS.gene21116.t1 | AT5G13120 | 64.103 | 195 | 62 | 3 | 62 | 249 | 59 | 252 | 4.71e-86 | 256 |
| MS.gene21116.t1 | AT5G13120 | 64.103 | 195 | 62 | 3 | 62 | 249 | 63 | 256 | 5.48e-86 | 256 |
| MS.gene21116.t1 | AT2G29960 | 64.171 | 187 | 58 | 2 | 70 | 249 | 17 | 201 | 1.20e-77 | 233 |
| MS.gene21116.t1 | AT2G29960 | 64.171 | 187 | 58 | 2 | 70 | 249 | 17 | 201 | 1.20e-77 | 233 |
| MS.gene21116.t1 | AT5G58710 | 66.857 | 175 | 49 | 2 | 82 | 249 | 32 | 204 | 8.77e-77 | 231 |
| MS.gene21116.t1 | AT3G55920 | 58.974 | 195 | 70 | 3 | 62 | 249 | 37 | 228 | 3.42e-72 | 220 |
| MS.gene21116.t1 | AT2G21130 | 62.722 | 169 | 54 | 2 | 86 | 247 | 6 | 172 | 3.37e-71 | 216 |
| MS.gene21116.t1 | AT3G56070 | 62.722 | 169 | 54 | 2 | 86 | 247 | 5 | 171 | 9.39e-70 | 212 |
| MS.gene21116.t1 | AT3G56070 | 62.722 | 169 | 54 | 2 | 86 | 247 | 5 | 171 | 9.39e-70 | 212 |
| MS.gene21116.t1 | AT4G38740 | 60.947 | 169 | 57 | 2 | 86 | 247 | 5 | 171 | 4.05e-69 | 211 |
| MS.gene21116.t1 | AT2G29960 | 59.893 | 187 | 56 | 3 | 70 | 249 | 17 | 191 | 1.37e-68 | 210 |
| MS.gene21116.t1 | AT2G16600 | 66.438 | 146 | 42 | 1 | 86 | 224 | 6 | 151 | 1.47e-68 | 209 |
| MS.gene21116.t1 | AT4G34870 | 57.396 | 169 | 63 | 2 | 86 | 247 | 5 | 171 | 1.83e-62 | 194 |
| MS.gene21116.t1 | AT3G63400 | 58.523 | 176 | 63 | 2 | 79 | 246 | 1 | 174 | 3.90e-62 | 200 |
| MS.gene21116.t1 | AT2G38730 | 58.084 | 167 | 63 | 3 | 87 | 247 | 34 | 199 | 8.24e-62 | 193 |
| MS.gene21116.t1 | AT3G63400 | 58.523 | 176 | 63 | 2 | 79 | 246 | 1 | 174 | 1.60e-60 | 200 |
| MS.gene21116.t1 | AT3G63400 | 58.523 | 176 | 63 | 2 | 79 | 246 | 1 | 174 | 1.60e-60 | 200 |
| MS.gene21116.t1 | AT3G63400 | 58.523 | 176 | 63 | 2 | 79 | 246 | 1 | 174 | 1.60e-60 | 200 |
| MS.gene21116.t1 | AT4G34960 | 55.682 | 176 | 70 | 2 | 82 | 250 | 44 | 218 | 2.10e-60 | 190 |
| MS.gene21116.t1 | AT2G15790 | 58.721 | 172 | 62 | 2 | 85 | 248 | 4 | 174 | 2.22e-59 | 192 |
| MS.gene21116.t1 | AT2G16600 | 61.871 | 139 | 38 | 1 | 86 | 224 | 6 | 129 | 2.21e-58 | 182 |
| MS.gene21116.t1 | AT4G34960 | 60.156 | 128 | 44 | 1 | 82 | 202 | 44 | 171 | 1.45e-47 | 155 |
| MS.gene21116.t1 | AT3G44600 | 52.941 | 153 | 66 | 5 | 92 | 243 | 478 | 625 | 5.06e-41 | 149 |
| MS.gene21116.t1 | AT2G36130 | 48.993 | 149 | 70 | 5 | 97 | 244 | 17 | 160 | 1.02e-39 | 135 |
| MS.gene21116.t1 | AT4G32420 | 44.886 | 176 | 87 | 2 | 79 | 246 | 1 | 174 | 7.31e-36 | 135 |
| MS.gene21116.t1 | AT4G32420 | 44.886 | 176 | 87 | 2 | 79 | 246 | 1 | 174 | 7.31e-36 | 135 |
| MS.gene21116.t1 | AT4G32420 | 44.886 | 176 | 87 | 2 | 79 | 246 | 1 | 174 | 7.31e-36 | 135 |
| MS.gene21116.t1 | AT4G32420 | 44.886 | 176 | 87 | 2 | 79 | 246 | 1 | 174 | 7.31e-36 | 135 |
| MS.gene21116.t1 | AT3G22920 | 43.605 | 172 | 80 | 5 | 85 | 247 | 4 | 167 | 2.14e-35 | 126 |
| MS.gene21116.t1 | AT4G32420 | 48.052 | 154 | 72 | 1 | 79 | 224 | 1 | 154 | 1.03e-34 | 132 |
| MS.gene21116.t1 | AT1G01940 | 51.515 | 132 | 57 | 4 | 99 | 228 | 10 | 136 | 3.08e-32 | 116 |
| MS.gene21116.t1 | AT5G67530 | 44.898 | 147 | 75 | 5 | 99 | 244 | 353 | 494 | 2.14e-29 | 116 |
| MS.gene21116.t1 | AT4G33060 | 48.800 | 125 | 56 | 5 | 92 | 213 | 15 | 134 | 8.93e-26 | 105 |
| MS.gene21116.t1 | AT1G53720 | 36.970 | 165 | 88 | 7 | 97 | 250 | 8 | 167 | 1.98e-17 | 80.9 |
| MS.gene21116.t1 | AT1G53720 | 36.970 | 165 | 88 | 7 | 97 | 250 | 8 | 167 | 2.54e-17 | 81.3 |
| MS.gene21116.t1 | AT3G66654 | 22.727 | 242 | 152 | 7 | 1 | 231 | 1 | 218 | 8.71e-12 | 63.5 |
| MS.gene21116.t1 | AT3G66654 | 22.727 | 242 | 152 | 7 | 1 | 231 | 1 | 218 | 8.71e-12 | 63.5 |
| MS.gene21116.t1 | AT3G66654 | 22.727 | 242 | 152 | 7 | 1 | 231 | 1 | 218 | 8.71e-12 | 63.5 |
| MS.gene21116.t1 | AT3G66654 | 22.727 | 242 | 152 | 7 | 1 | 231 | 1 | 218 | 8.71e-12 | 63.5 |
| MS.gene21116.t1 | AT3G66654 | 22.727 | 242 | 152 | 7 | 1 | 231 | 1 | 218 | 8.71e-12 | 63.5 |
| MS.gene21116.t1 | AT2G47320 | 32.308 | 130 | 81 | 4 | 99 | 228 | 87 | 209 | 5.28e-11 | 61.2 |
Find 0 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATATTATTAAAACTT+GGG | - | 10913:47057-47076 | None:intergenic | 10.0% |
| !! | CTTATTTAAATAAATTTCAA+AGG | - | 10913:46801-46820 | None:intergenic | 10.0% |
| !! | ACAAATTTAAATCTGAATAA+TGG | - | 10913:46474-46493 | None:intergenic | 15.0% |
| !! | GAAAACATATTATTAAAACT+TGG | - | 10913:47058-47077 | None:intergenic | 15.0% |
| !! | TAATCTAATAAACTATTCTA+AGG | + | 10913:46745-46764 | MS.gene21116:intron | 15.0% |
| !!! | AAATTAGAGTTTTGAAATAT+AGG | - | 10913:47223-47242 | None:intergenic | 15.0% |
| !!! | TTGTTTTTGTTTTCATTTTA+GGG | + | 10913:45590-45609 | MS.gene21116:intron | 15.0% |
| !!! | TTTGTTTTTGTTTTCATTTT+AGG | + | 10913:45589-45608 | MS.gene21116:intron | 15.0% |
| !! | AATATTCCTTGTATGTAAAA+GGG | - | 10913:47093-47112 | None:intergenic | 20.0% |
| !! | ATTACTTTATGAATCAGATA+AGG | + | 10913:46682-46701 | MS.gene21116:intron | 20.0% |
| !! | ATTCATAAAGTAATAGAAGA+TGG | - | 10913:46676-46695 | None:intergenic | 20.0% |
| !! | GTTTAATAAGTCTTTAAATG+TGG | + | 10913:45454-45473 | MS.gene21116:intron | 20.0% |
| !! | TAATATTCCTTGTATGTAAA+AGG | - | 10913:47094-47113 | None:intergenic | 20.0% |
| !! | TGTAAATGTACATTGTTAAT+GGG | + | 10913:45557-45576 | MS.gene21116:intron | 20.0% |
| !! | TTACATACAAGGAATATTAT+GGG | + | 10913:47095-47114 | MS.gene21116:intron | 20.0% |
| !! | TTACTTTATGAATCAGATAA+GGG | + | 10913:46683-46702 | MS.gene21116:intron | 20.0% |
| !! | TTAGCATTTGTATTAACATT+TGG | - | 10913:46871-46890 | None:intergenic | 20.0% |
| !! | TTCATAAAGTAATAGAAGAT+GGG | - | 10913:46675-46694 | None:intergenic | 20.0% |
| !! | TTTACATACAAGGAATATTA+TGG | + | 10913:47094-47113 | MS.gene21116:intron | 20.0% |
| !!! | AGCATTTAGAATAACTTATT+CGG | - | 10913:46907-46926 | None:intergenic | 20.0% |
| !!! | ATTGGTTTTATTATCTTACA+TGG | + | 10913:45850-45869 | MS.gene21116:intron | 20.0% |
| !!! | CACATCAAATATGTTTTAAT+TGG | + | 10913:46306-46325 | MS.gene21116:intron | 20.0% |
| !!! | TAAGCAATCAAATTTTTCTT+TGG | + | 10913:46031-46050 | MS.gene21116:intron | 20.0% |
| !!! | TGTCATTTTAATCTTTTTAC+TGG | + | 10913:46491-46510 | MS.gene21116:intron | 20.0% |
| !!! | TGTTTTTGTTTTCATTTTAG+GGG | + | 10913:45591-45610 | MS.gene21116:intron | 20.0% |
| !!! | TTTTTATGGATTTTAAACTG+TGG | + | 10913:47264-47283 | MS.gene21116:intron | 20.0% |
| ! | AACTCAAAAAACAACTTGTA+AGG | - | 10913:47026-47045 | None:intergenic | 25.0% |
| ! | AATCAAAGATTTCATGATTC+AGG | + | 10913:46185-46204 | MS.gene21116:CDS | 25.0% |
| ! | AGCGTACTAACAAAATATAA+CGG | - | 10913:46241-46260 | None:intergenic | 25.0% |
| ! | ATAAGAATTAGATAGTAACC+TGG | - | 10913:45163-45182 | None:intergenic | 25.0% |
| ! | ATAATTGCATTTGTGAGATT+GGG | - | 10913:47347-47366 | None:intergenic | 25.0% |
| ! | ATCAAAGATTTCATGATTCA+GGG | + | 10913:46186-46205 | MS.gene21116:CDS | 25.0% |
| ! | CAATTGCTACAATGTTATAT+TGG | + | 10913:47381-47400 | MS.gene21116:intron | 25.0% |
| ! | CATATTATTAAAACTTGGGT+TGG | - | 10913:47053-47072 | None:intergenic | 25.0% |
| ! | CCATTAAAAATTTCGTGATT+TGG | + | 10913:45776-45795 | MS.gene21116:intron | 25.0% |
| ! | CTGTAAATGTACATTGTTAA+TGG | + | 10913:45556-45575 | MS.gene21116:intron | 25.0% |
| ! | TACTTTATGAATCAGATAAG+GGG | + | 10913:46684-46703 | MS.gene21116:intron | 25.0% |
| ! | TATAATTGCATTTGTGAGAT+TGG | - | 10913:47348-47367 | None:intergenic | 25.0% |
| ! | TGCAATCAAAGTCAATAAAA+AGG | - | 10913:47468-47487 | None:intergenic | 25.0% |
| ! | TTGACAATTTAACATCAACA+GGG | + | 10913:47416-47435 | MS.gene21116:intron | 25.0% |
| ! | TTGACCTACTGAAAAAATAA+AGG | + | 10913:47304-47323 | MS.gene21116:intron | 25.0% |
| ! | TTTGACAATTTAACATCAAC+AGG | + | 10913:47415-47434 | MS.gene21116:intron | 25.0% |
| !! | AACAATTTTGCATGTTTTCA+AGG | - | 10913:47763-47782 | None:intergenic | 25.0% |
| !! | ACAATTTTGCATGTTTTCAA+GGG | - | 10913:47762-47781 | None:intergenic | 25.0% |
| !! | ATTAAGGTGTTTATTCAAAC+AGG | - | 10913:45209-45228 | None:intergenic | 25.0% |
| !! | CAGTATTAAAAGTTTTGCTT+TGG | + | 10913:46448-46467 | MS.gene21116:intron | 25.0% |
| !! | CCAAATCACGAAATTTTTAA+TGG | - | 10913:45779-45798 | None:intergenic | 25.0% |
| !! | TTAAGGTGTTTATTCAAACA+GGG | - | 10913:45208-45227 | None:intergenic | 25.0% |
| !!! | AAAAGTACAGACTTTTAGTT+AGG | - | 10913:47248-47267 | None:intergenic | 25.0% |
| !!! | AATATGTTTTAATTGGATGC+AGG | + | 10913:46313-46332 | MS.gene21116:intron | 25.0% |
| !!! | ATATGTTTTAATTGGATGCA+GGG | + | 10913:46314-46333 | MS.gene21116:intron | 25.0% |
| !!! | ATTTTTTATTTGCACTGTAC+CGG | + | 10913:46637-46656 | MS.gene21116:CDS | 25.0% |
| !!! | CTAAAAGTCTGTACTTTTTA+TGG | + | 10913:47250-47269 | MS.gene21116:intron | 25.0% |
| !!! | CTGGAAATGTATTTTTAAGT+GGG | + | 10913:46988-47007 | MS.gene21116:intron | 25.0% |
| !!! | TACAAGTTGTTTTTTGAGTT+AGG | + | 10913:47026-47045 | MS.gene21116:intron | 25.0% |
| AAAAAACAACTTGTAAGGTG+AGG | - | 10913:47021-47040 | None:intergenic | 30.0% | |
| AAAAACAACTTGTAAGGTGA+GGG | - | 10913:47020-47039 | None:intergenic | 30.0% | |
| AAGCAACAAAAGATACATAC+AGG | - | 10913:46390-46409 | None:intergenic | 30.0% | |
| ACATATACACATGATGCTAA+GGG | + | 10913:46268-46287 | MS.gene21116:intron | 30.0% | |
| ACATGCAAAATTGTTAACTC+TGG | + | 10913:47768-47787 | MS.gene21116:CDS | 30.0% | |
| ATGCTATAAGCTGCAAATTA+AGG | - | 10913:45225-45244 | None:intergenic | 30.0% | |
| ATTTCGTTTGCAGAAAATCT+TGG | + | 10913:45800-45819 | MS.gene21116:intron | 30.0% | |
| CCACTTAAAAATACATTTCC+AGG | - | 10913:46990-47009 | None:intergenic | 30.0% | |
| TACATATACACATGATGCTA+AGG | + | 10913:46267-46286 | MS.gene21116:intron | 30.0% | |
| TGAAATCTTTGATTATGCGA+TGG | - | 10913:46179-46198 | None:intergenic | 30.0% | |
| TGGTTGAGATGCTAAATATT+AGG | - | 10913:47557-47576 | None:intergenic | 30.0% | |
| ! | GCATAAGAATGTGTTACTAA+AGG | + | 10913:45530-45549 | MS.gene21116:intron | 30.0% |
| ! | GTTTTCTTTGATGTGGTTAT+TGG | + | 10913:45921-45940 | MS.gene21116:CDS | 30.0% |
| ! | TATGAGTATTGTGGTGAAAT+TGG | + | 10913:46068-46087 | MS.gene21116:intron | 30.0% |
| ! | TTGTTGTTGTATGAGTATTG+TGG | + | 10913:46059-46078 | MS.gene21116:intron | 30.0% |
| ! | TTTTCATGTTGTAGACTTCA+TGG | + | 10913:47640-47659 | MS.gene21116:intron | 30.0% |
| !! | CCTGGAAATGTATTTTTAAG+TGG | + | 10913:46987-47006 | MS.gene21116:intron | 30.0% |
| !!! | CAAGCCTTTATTTTTTCAGT+AGG | - | 10913:47311-47330 | None:intergenic | 30.0% |
| AAAGATTTCATGATTCAGGG+AGG | + | 10913:46189-46208 | MS.gene21116:CDS | 35.0% | |
| AAGATTTCATGATTCAGGGA+GGG | + | 10913:46190-46209 | MS.gene21116:CDS | 35.0% | |
| AAGCGAAATCAATCACTTCT+CGG | + | 10913:45717-45736 | MS.gene21116:CDS | 35.0% | |
| AATTGACTGCCGTTACTATT+AGG | - | 10913:46620-46639 | None:intergenic | 35.0% | |
| ATCTTTGATTATGCGATGGA+AGG | - | 10913:46175-46194 | None:intergenic | 35.0% | |
| ATCTTTGTTCTCAACACAGT+TGG | + | 10913:45100-45119 | MS.gene21116:CDS | 35.0% | |
| ATGACAATTTACTGCATCCA+AGG | - | 10913:45652-45671 | None:intergenic | 35.0% | |
| GTATTTGGACATGTCATTGA+TGG | + | 10913:47681-47700 | MS.gene21116:CDS | 35.0% | |
| TCTGCAGTGATTCAAAACAT+TGG | + | 10913:45832-45851 | MS.gene21116:intron | 35.0% | |
| TGACATGTCCAAATACAACA+TGG | - | 10913:47677-47696 | None:intergenic | 35.0% | |
| TTCTTTGATGTGGTTATTGG+AGG | + | 10913:45924-45943 | MS.gene21116:CDS | 35.0% | |
| TTTGAGAATAATAACCGTGC+AGG | + | 10913:46120-46139 | MS.gene21116:intron | 35.0% | |
| ! | AAGCAAGGTTTTCTTTGATG+TGG | + | 10913:45914-45933 | MS.gene21116:CDS | 35.0% |
| ! | AGGATTGTTATTGGCCTATT+TGG | + | 10913:45960-45979 | MS.gene21116:CDS | 35.0% |
| ! | ATAGGCTGTGTGTTTCATTT+TGG | - | 10913:47205-47224 | None:intergenic | 35.0% |
| ! | CGGAAATTCTCAACTGTTTT+GGG | - | 10913:45996-46015 | None:intergenic | 35.0% |
| ! | GAAAACCTTGCTTGTTACTT+TGG | - | 10913:45907-45926 | None:intergenic | 35.0% |
| ! | GAAGTTCCCTTTTACATACA+AGG | + | 10913:47084-47103 | MS.gene21116:intron | 35.0% |
| ! | TCGGAAATTCTCAACTGTTT+TGG | - | 10913:45997-46016 | None:intergenic | 35.0% |
| ! | TCTTTTTACTGGACTGTCAA+TGG | + | 10913:46502-46521 | MS.gene21116:intron | 35.0% |
| AATGCCGGTCCTAATAGTAA+CGG | + | 10913:46608-46627 | MS.gene21116:CDS | 40.0% | |
| ACGTTAAATGAGATATGGCC+TGG | + | 10913:46969-46988 | MS.gene21116:intron | 40.0% | |
| AGATGGGAAAATAGTCTCAC+CGG | - | 10913:46659-46678 | None:intergenic | 40.0% | |
| AGATTTCATGATTCAGGGAG+GGG | + | 10913:46191-46210 | MS.gene21116:CDS | 40.0% | |
| AGGCCATATCTCATTTAACG+TGG | - | 10913:46970-46989 | None:intergenic | 40.0% | |
| CATGTTGTAGACTTCATGGT+TGG | + | 10913:47644-47663 | MS.gene21116:intron | 40.0% | |
| GACAATCGCCATGTTGTATT+TGG | + | 10913:47666-47685 | MS.gene21116:CDS | 40.0% | |
| GGATGCAGTAAATTGTCATC+AGG | + | 10913:45653-45672 | MS.gene21116:CDS | 40.0% | |
| GGCCATATCTCATTTAACGT+GGG | - | 10913:46969-46988 | None:intergenic | 40.0% | |
| GTCATCAGGATATCATTACG+CGG | + | 10913:45667-45686 | MS.gene21116:CDS | 40.0% | |
| GTCCCACGTTAAATGAGATA+TGG | + | 10913:46964-46983 | MS.gene21116:intron | 40.0% | |
| TACATGGTTGCGTTACTTCT+AGG | + | 10913:45866-45885 | MS.gene21116:intron | 40.0% | |
| TCTGCTGGAAGGATTGTTAT+TGG | + | 10913:45951-45970 | MS.gene21116:CDS | 40.0% | |
| TGGACATGTCATTGATGGAA+TGG | + | 10913:47686-47705 | MS.gene21116:CDS | 40.0% | |
| TGGGAACAACATCTCCAAAT+AGG | - | 10913:45977-45996 | None:intergenic | 40.0% | |
| TGTGAGGAAACTTGAATCAC+AGG | + | 10913:47713-47732 | MS.gene21116:CDS | 40.0% | |
| TTGATGGAATGGATGTTGTG+AGG | + | 10913:47697-47716 | MS.gene21116:CDS | 40.0% | |
| TTTAATTGGATGCAGGGAAC+TGG | + | 10913:46320-46339 | MS.gene21116:intron | 40.0% | |
| TTTGATTATGCGATGGAAGG+TGG | - | 10913:46172-46191 | None:intergenic | 40.0% | |
| ! | CAGCATTGAAACCAGAAAGA+AGG | - | 10913:45139-45158 | None:intergenic | 40.0% |
| !! | GTTTTGAATCACTGCAGAAC+TGG | - | 10913:45830-45849 | None:intergenic | 40.0% |
| AAGGGGAATCCTTCTGTGTT+TGG | + | 10913:46701-46720 | MS.gene21116:intron | 45.0% | |
| AATAACCGTGCAGGAGAGAA+AGG | + | 10913:46129-46148 | MS.gene21116:intron | 45.0% | |
| ACTGCCGTTACTATTAGGAC+CGG | - | 10913:46615-46634 | None:intergenic | 45.0% | |
| ACTGGTGGAGTCAGTATCTA+TGG | + | 10913:46338-46357 | MS.gene21116:CDS | 45.0% | |
| AGGGGAATCCTTCTGTGTTT+GGG | + | 10913:46702-46721 | MS.gene21116:intron | 45.0% | |
| CAGAGTCAGAACCTTCTTTC+TGG | + | 10913:45125-45144 | MS.gene21116:CDS | 45.0% | |
| CATATCCTTTCTCTCCTGCA+CGG | - | 10913:46137-46156 | None:intergenic | 45.0% | |
| CCTGTTTACCCAAACACAGA+AGG | - | 10913:46713-46732 | None:intergenic | 45.0% | |
| CCTTCTGTGTTTGGGTAAAC+AGG | + | 10913:46710-46729 | MS.gene21116:intron | 45.0% | |
| GAGACAAGCAGCTACAACAA+TGG | + | 10913:47735-47754 | MS.gene21116:CDS | 45.0% | |
| GCAAGCCAAAGTAACAAGCA+AGG | + | 10913:45899-45918 | MS.gene21116:CDS | 45.0% | |
| GTTATTGGAGGTGAATCTGC+TGG | + | 10913:45936-45955 | MS.gene21116:CDS | 45.0% | |
| TCTGGAGAACTTCCTCTAGA+TGG | + | 10913:47786-47805 | MS.gene21116:CDS | 45.0% | |
| TTCCTTGCAGTGAAGCATGT+TGG | + | 10913:46563-46582 | MS.gene21116:intron | 45.0% | |
| TTTGCCATGCTCAAAACTCC+AGG | - | 10913:46590-46609 | None:intergenic | 45.0% | |
| ! | AATTTCCGAGCTTTGTGCAC+AGG | + | 10913:46008-46027 | MS.gene21116:CDS | 45.0% |
| !! | GTTTTGAGCATGGCAAATGC+CGG | + | 10913:46593-46612 | MS.gene21116:CDS | 45.0% |
| !! | TTCTGGTTTCAATGCTGTCC+AGG | + | 10913:45142-45161 | MS.gene21116:CDS | 45.0% |
| AATTGGATGCAGGGAACTGG+TGG | + | 10913:46323-46342 | MS.gene21116:intron | 50.0% | |
| CAGGATATCATTACGCGGCT+AGG | + | 10913:45672-45691 | MS.gene21116:CDS | 50.0% | |
| CGTGCAGGAGAGAAAGGATA+TGG | + | 10913:46135-46154 | MS.gene21116:intron | 50.0% | |
| GACCAACATGCTTCACTGCA+AGG | - | 10913:46568-46587 | None:intergenic | 50.0% | |
| GCTTACCTGTGCACAAAGCT+CGG | - | 10913:46016-46035 | None:intergenic | 50.0% | |
| GGTGGAGTCAGTATCTATGG+TGG | + | 10913:46341-46360 | MS.gene21116:CDS | 50.0% | |
| TCATTACGCGGCTAGGCTTT+CGG | + | 10913:45679-45698 | MS.gene21116:CDS | 50.0% | |
| TTGGAGGTGAATCTGCTGGA+AGG | + | 10913:45940-45959 | MS.gene21116:CDS | 50.0% | |
| !!! | TGGTCCTGGAGTTTTGAGCA+TGG | + | 10913:46583-46602 | MS.gene21116:CDS | 50.0% |
| ACTGCATCCAAGGTGTGCTC+TGG | - | 10913:45642-45661 | None:intergenic | 55.0% | |
| AGCAGTACCAGAGCACACCT+TGG | + | 10913:45632-45651 | MS.gene21116:CDS | 55.0% | |
| GCAGTGAAGCATGTTGGTCC+TGG | + | 10913:46569-46588 | MS.gene21116:intron | 55.0% | |
| CAGGGAGGGGACTTCACAGA+AGG | + | 10913:46204-46223 | MS.gene21116:CDS | 60.0% | |
| GTGTGTGCGCGCGCACGTGC+TGG | - | 10913:47577-47596 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10913 | gene | 45095 | 47812 | 45095 | ID=MS.gene21116 |
| 10913 | mRNA | 45095 | 47812 | 45095 | ID=MS.gene21116.t1;Parent=MS.gene21116 |
| 10913 | exon | 45095 | 45163 | 45095 | ID=MS.gene21116.t1.exon1;Parent=MS.gene21116.t1 |
| 10913 | CDS | 45095 | 45163 | 45095 | ID=cds.MS.gene21116.t1;Parent=MS.gene21116.t1 |
| 10913 | exon | 45611 | 45766 | 45611 | ID=MS.gene21116.t1.exon2;Parent=MS.gene21116.t1 |
| 10913 | CDS | 45611 | 45766 | 45611 | ID=cds.MS.gene21116.t1;Parent=MS.gene21116.t1 |
| 10913 | exon | 45888 | 46029 | 45888 | ID=MS.gene21116.t1.exon3;Parent=MS.gene21116.t1 |
| 10913 | CDS | 45888 | 46029 | 45888 | ID=cds.MS.gene21116.t1;Parent=MS.gene21116.t1 |
| 10913 | exon | 46142 | 46230 | 46142 | ID=MS.gene21116.t1.exon4;Parent=MS.gene21116.t1 |
| 10913 | CDS | 46142 | 46230 | 46142 | ID=cds.MS.gene21116.t1;Parent=MS.gene21116.t1 |
| 10913 | exon | 46335 | 46389 | 46335 | ID=MS.gene21116.t1.exon5;Parent=MS.gene21116.t1 |
| 10913 | CDS | 46335 | 46389 | 46335 | ID=cds.MS.gene21116.t1;Parent=MS.gene21116.t1 |
| 10913 | exon | 46573 | 46658 | 46573 | ID=MS.gene21116.t1.exon6;Parent=MS.gene21116.t1 |
| 10913 | CDS | 46573 | 46658 | 46573 | ID=cds.MS.gene21116.t1;Parent=MS.gene21116.t1 |
| 10913 | exon | 47654 | 47812 | 47654 | ID=MS.gene21116.t1.exon7;Parent=MS.gene21116.t1 |
| 10913 | CDS | 47654 | 47812 | 47654 | ID=cds.MS.gene21116.t1;Parent=MS.gene21116.t1 |
| Gene Sequence |
| Protein sequence |
