Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22209.t1 | RHN66809.1 | 98.5 | 395 | 6 | 0 | 1 | 395 | 1 | 395 | 5.90E-226 | 793.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22209.t1 | Q9SSU8 | 76.1 | 351 | 75 | 2 | 45 | 386 | 44 | 394 | 9.4e-156 | 551.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22209.t1 | A0A396IMG0 | 98.5 | 395 | 6 | 0 | 1 | 395 | 1 | 395 | 4.2e-226 | 793.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene22209 | 0.84053 | 8.23E-58 | -1.69E-46 |
MS.gene049217 | MS.gene22209 | 0.822744 | 2.01E-53 | -1.69E-46 |
MS.gene049222 | MS.gene22209 | 0.801218 | 9.99E-49 | -1.69E-46 |
MS.gene049351 | MS.gene22209 | 0.85565 | 5.47E-62 | -1.69E-46 |
MS.gene049356 | MS.gene22209 | 0.856455 | 3.18E-62 | -1.69E-46 |
MS.gene049369 | MS.gene22209 | 0.872021 | 4.38E-67 | -1.69E-46 |
MS.gene049396 | MS.gene22209 | 0.827463 | 1.54E-54 | -1.69E-46 |
MS.gene049425 | MS.gene22209 | -0.80082 | 1.20E-48 | -1.69E-46 |
MS.gene049427 | MS.gene22209 | 0.843754 | 1.15E-58 | -1.69E-46 |
MS.gene049488 | MS.gene22209 | 0.802056 | 6.72E-49 | -1.69E-46 |
MS.gene049491 | MS.gene22209 | 0.845927 | 2.99E-59 | -1.69E-46 |
MS.gene049609 | MS.gene22209 | 0.85829 | 9.12E-63 | -1.69E-46 |
MS.gene049614 | MS.gene22209 | 0.806914 | 6.53E-50 | -1.69E-46 |
MS.gene049661 | MS.gene22209 | 0.867635 | 1.18E-65 | -1.69E-46 |
MS.gene049662 | MS.gene22209 | 0.857706 | 1.36E-62 | -1.69E-46 |
MS.gene049758 | MS.gene22209 | 0.806745 | 7.09E-50 | -1.69E-46 |
MS.gene049805 | MS.gene22209 | 0.873933 | 1.00E-67 | -1.69E-46 |
MS.gene050076 | MS.gene22209 | 0.820169 | 7.91E-53 | -1.69E-46 |
MS.gene050301 | MS.gene22209 | 0.848896 | 4.57E-60 | -1.69E-46 |
MS.gene050397 | MS.gene22209 | 0.853571 | 2.19E-61 | -1.69E-46 |
MS.gene050432 | MS.gene22209 | 0.83549 | 1.63E-56 | -1.69E-46 |
MS.gene050464 | MS.gene22209 | 0.826917 | 2.09E-54 | -1.69E-46 |
MS.gene050520 | MS.gene22209 | 0.800127 | 1.67E-48 | -1.69E-46 |
MS.gene050529 | MS.gene22209 | 0.826465 | 2.67E-54 | -1.69E-46 |
MS.gene05053 | MS.gene22209 | 0.82488 | 6.35E-54 | -1.69E-46 |
MS.gene050593 | MS.gene22209 | 0.874402 | 6.95E-68 | -1.69E-46 |
MS.gene050670 | MS.gene22209 | 0.900593 | 6.28E-78 | -1.69E-46 |
MS.gene050686 | MS.gene22209 | 0.817435 | 3.30E-52 | -1.69E-46 |
MS.gene050747 | MS.gene22209 | 0.817438 | 3.30E-52 | -1.69E-46 |
MS.gene050767 | MS.gene22209 | 0.84556 | 3.76E-59 | -1.69E-46 |
MS.gene050770 | MS.gene22209 | 0.849505 | 3.10E-60 | -1.69E-46 |
MS.gene050772 | MS.gene22209 | 0.873248 | 1.70E-67 | -1.69E-46 |
MS.gene050950 | MS.gene22209 | 0.813376 | 2.64E-51 | -1.69E-46 |
MS.gene050971 | MS.gene22209 | 0.83728 | 5.71E-57 | -1.69E-46 |
MS.gene05101 | MS.gene22209 | 0.840434 | 8.72E-58 | -1.69E-46 |
MS.gene05105 | MS.gene22209 | 0.918784 | 1.02E-86 | -1.69E-46 |
MS.gene051228 | MS.gene22209 | 0.810931 | 9.02E-51 | -1.69E-46 |
MS.gene051255 | MS.gene22209 | 0.812641 | 3.83E-51 | -1.69E-46 |
MS.gene051360 | MS.gene22209 | 0.810964 | 8.87E-51 | -1.69E-46 |
MS.gene051387 | MS.gene22209 | 0.873342 | 1.58E-67 | -1.69E-46 |
MS.gene051471 | MS.gene22209 | 0.800958 | 1.13E-48 | -1.69E-46 |
MS.gene051525 | MS.gene22209 | 0.830767 | 2.44E-55 | -1.69E-46 |
MS.gene051605 | MS.gene22209 | 0.829113 | 6.17E-55 | -1.69E-46 |
MS.gene051666 | MS.gene22209 | 0.842783 | 2.09E-58 | -1.69E-46 |
MS.gene051692 | MS.gene22209 | 0.848488 | 5.94E-60 | -1.69E-46 |
MS.gene051694 | MS.gene22209 | 0.818308 | 2.10E-52 | -1.69E-46 |
MS.gene051858 | MS.gene22209 | 0.872414 | 3.24E-67 | -1.69E-46 |
MS.gene051874 | MS.gene22209 | 0.837466 | 5.11E-57 | -1.69E-46 |
MS.gene051877 | MS.gene22209 | 0.851381 | 9.21E-61 | -1.69E-46 |
MS.gene052011 | MS.gene22209 | -0.800082 | 1.70E-48 | -1.69E-46 |
MS.gene052078 | MS.gene22209 | 0.834089 | 3.67E-56 | -1.69E-46 |
MS.gene052188 | MS.gene22209 | 0.884447 | 1.90E-71 | -1.69E-46 |
MS.gene052253 | MS.gene22209 | 0.858943 | 5.82E-63 | -1.69E-46 |
MS.gene052271 | MS.gene22209 | 0.840861 | 6.74E-58 | -1.69E-46 |
MS.gene052290 | MS.gene22209 | 0.809389 | 1.94E-50 | -1.69E-46 |
MS.gene052293 | MS.gene22209 | 0.800972 | 1.12E-48 | -1.69E-46 |
MS.gene052310 | MS.gene22209 | 0.896959 | 2.23E-76 | -1.69E-46 |
MS.gene052322 | MS.gene22209 | 0.8403 | 9.45E-58 | -1.69E-46 |
MS.gene052326 | MS.gene22209 | 0.806136 | 9.52E-50 | -1.69E-46 |
MS.gene052340 | MS.gene22209 | 0.851926 | 6.46E-61 | -1.69E-46 |
MS.gene052346 | MS.gene22209 | 0.802059 | 6.71E-49 | -1.69E-46 |
MS.gene052379 | MS.gene22209 | 0.836284 | 1.02E-56 | -1.69E-46 |
MS.gene052421 | MS.gene22209 | 0.898689 | 4.15E-77 | -1.69E-46 |
MS.gene052481 | MS.gene22209 | 0.851064 | 1.13E-60 | -1.69E-46 |
MS.gene052484 | MS.gene22209 | 0.859693 | 3.47E-63 | -1.69E-46 |
MS.gene052485 | MS.gene22209 | 0.874946 | 4.54E-68 | -1.69E-46 |
MS.gene052501 | MS.gene22209 | 0.809642 | 1.71E-50 | -1.69E-46 |
MS.gene052505 | MS.gene22209 | 0.823058 | 1.70E-53 | -1.69E-46 |
MS.gene052615 | MS.gene22209 | 0.84314 | 1.68E-58 | -1.69E-46 |
MS.gene052870 | MS.gene22209 | 0.815382 | 9.51E-52 | -1.69E-46 |
MS.gene052872 | MS.gene22209 | 0.807919 | 3.99E-50 | -1.69E-46 |
MS.gene052999 | MS.gene22209 | 0.80598 | 1.03E-49 | -1.69E-46 |
MS.gene053009 | MS.gene22209 | 0.825283 | 5.10E-54 | -1.69E-46 |
MS.gene053103 | MS.gene22209 | 0.851011 | 1.17E-60 | -1.69E-46 |
MS.gene053104 | MS.gene22209 | 0.840241 | 9.79E-58 | -1.69E-46 |
MS.gene053207 | MS.gene22209 | 0.810174 | 1.31E-50 | -1.69E-46 |
MS.gene053209 | MS.gene22209 | 0.84587 | 3.10E-59 | -1.69E-46 |
MS.gene053213 | MS.gene22209 | 0.83205 | 1.18E-55 | -1.69E-46 |
MS.gene053286 | MS.gene22209 | 0.814722 | 1.33E-51 | -1.69E-46 |
MS.gene053322 | MS.gene22209 | 0.866697 | 2.36E-65 | -1.69E-46 |
MS.gene053384 | MS.gene22209 | 0.816681 | 4.88E-52 | -1.69E-46 |
MS.gene053449 | MS.gene22209 | 0.880081 | 7.36E-70 | -1.69E-46 |
MS.gene053557 | MS.gene22209 | 0.817175 | 3.78E-52 | -1.69E-46 |
MS.gene053574 | MS.gene22209 | 0.847871 | 8.79E-60 | -1.69E-46 |
MS.gene053632 | MS.gene22209 | 0.80437 | 2.23E-49 | -1.69E-46 |
MS.gene053758 | MS.gene22209 | 0.877142 | 7.97E-69 | -1.69E-46 |
MS.gene053813 | MS.gene22209 | 0.876925 | 9.47E-69 | -1.69E-46 |
MS.gene053824 | MS.gene22209 | 0.804407 | 2.19E-49 | -1.69E-46 |
MS.gene053836 | MS.gene22209 | 0.805255 | 1.46E-49 | -1.69E-46 |
MS.gene053912 | MS.gene22209 | 0.852347 | 4.90E-61 | -1.69E-46 |
MS.gene053916 | MS.gene22209 | 0.827755 | 1.31E-54 | -1.69E-46 |
MS.gene054010 | MS.gene22209 | 0.802259 | 6.11E-49 | -1.69E-46 |
MS.gene054011 | MS.gene22209 | 0.807354 | 5.27E-50 | -1.69E-46 |
MS.gene054013 | MS.gene22209 | 0.800043 | 1.73E-48 | -1.69E-46 |
MS.gene054123 | MS.gene22209 | 0.82787 | 1.23E-54 | -1.69E-46 |
MS.gene054376 | MS.gene22209 | 0.847651 | 1.01E-59 | -1.69E-46 |
MS.gene054543 | MS.gene22209 | 0.81277 | 3.59E-51 | -1.69E-46 |
MS.gene054642 | MS.gene22209 | 0.808557 | 2.92E-50 | -1.69E-46 |
MS.gene054802 | MS.gene22209 | 0.837146 | 6.18E-57 | -1.69E-46 |
MS.gene054803 | MS.gene22209 | 0.835547 | 1.57E-56 | -1.69E-46 |
MS.gene054804 | MS.gene22209 | 0.836045 | 1.18E-56 | -1.69E-46 |
MS.gene054955 | MS.gene22209 | 0.861664 | 8.75E-64 | -1.69E-46 |
MS.gene05505 | MS.gene22209 | 0.906026 | 2.30E-80 | -1.69E-46 |
MS.gene055116 | MS.gene22209 | 0.883061 | 6.17E-71 | -1.69E-46 |
MS.gene055206 | MS.gene22209 | 0.831175 | 1.94E-55 | -1.69E-46 |
MS.gene055224 | MS.gene22209 | 0.808602 | 2.86E-50 | -1.69E-46 |
MS.gene055277 | MS.gene22209 | 0.865113 | 7.47E-65 | -1.69E-46 |
MS.gene055289 | MS.gene22209 | 0.815601 | 8.50E-52 | -1.69E-46 |
MS.gene055390 | MS.gene22209 | 0.804874 | 1.75E-49 | -1.69E-46 |
MS.gene055397 | MS.gene22209 | 0.826419 | 2.74E-54 | -1.69E-46 |
MS.gene055412 | MS.gene22209 | 0.819779 | 9.71E-53 | -1.69E-46 |
MS.gene055422 | MS.gene22209 | 0.829825 | 4.14E-55 | -1.69E-46 |
MS.gene055499 | MS.gene22209 | 0.829803 | 4.20E-55 | -1.69E-46 |
MS.gene055533 | MS.gene22209 | 0.82761 | 1.42E-54 | -1.69E-46 |
MS.gene055647 | MS.gene22209 | 0.846196 | 2.53E-59 | -1.69E-46 |
MS.gene055722 | MS.gene22209 | 0.863647 | 2.14E-64 | -1.69E-46 |
MS.gene055909 | MS.gene22209 | 0.83987 | 1.22E-57 | -1.69E-46 |
MS.gene055911 | MS.gene22209 | 0.843111 | 1.71E-58 | -1.69E-46 |
MS.gene05592 | MS.gene22209 | 0.889174 | 3.07E-73 | -1.69E-46 |
MS.gene055941 | MS.gene22209 | 0.838795 | 2.33E-57 | -1.69E-46 |
MS.gene056083 | MS.gene22209 | 0.805911 | 1.06E-49 | -1.69E-46 |
MS.gene056191 | MS.gene22209 | 0.87443 | 6.80E-68 | -1.69E-46 |
MS.gene056374 | MS.gene22209 | 0.805829 | 1.11E-49 | -1.69E-46 |
MS.gene056407 | MS.gene22209 | 0.845064 | 5.13E-59 | -1.69E-46 |
MS.gene056410 | MS.gene22209 | 0.85946 | 4.07E-63 | -1.69E-46 |
MS.gene056422 | MS.gene22209 | 0.855843 | 4.80E-62 | -1.69E-46 |
MS.gene056448 | MS.gene22209 | 0.83747 | 5.10E-57 | -1.69E-46 |
MS.gene056511 | MS.gene22209 | 0.910132 | 2.64E-82 | -1.69E-46 |
MS.gene056549 | MS.gene22209 | 0.802363 | 5.81E-49 | -1.69E-46 |
MS.gene056609 | MS.gene22209 | 0.851719 | 7.39E-61 | -1.69E-46 |
MS.gene056612 | MS.gene22209 | 0.808531 | 2.96E-50 | -1.69E-46 |
MS.gene05664 | MS.gene22209 | 0.804024 | 2.63E-49 | -1.69E-46 |
MS.gene056659 | MS.gene22209 | 0.816132 | 6.48E-52 | -1.69E-46 |
MS.gene05666 | MS.gene22209 | 0.806524 | 7.89E-50 | -1.69E-46 |
MS.gene056796 | MS.gene22209 | 0.80236 | 5.82E-49 | -1.69E-46 |
MS.gene056897 | MS.gene22209 | 0.800905 | 1.16E-48 | -1.69E-46 |
MS.gene056942 | MS.gene22209 | 0.802488 | 5.48E-49 | -1.69E-46 |
MS.gene057011 | MS.gene22209 | 0.831959 | 1.24E-55 | -1.69E-46 |
MS.gene05702 | MS.gene22209 | 0.83245 | 9.39E-56 | -1.69E-46 |
MS.gene057076 | MS.gene22209 | 0.868098 | 8.40E-66 | -1.69E-46 |
MS.gene057123 | MS.gene22209 | 0.877211 | 7.54E-69 | -1.69E-46 |
MS.gene057124 | MS.gene22209 | 0.830836 | 2.35E-55 | -1.69E-46 |
MS.gene057129 | MS.gene22209 | 0.8402 | 1.00E-57 | -1.69E-46 |
MS.gene057146 | MS.gene22209 | 0.900667 | 5.82E-78 | -1.69E-46 |
MS.gene057285 | MS.gene22209 | 0.833875 | 4.15E-56 | -1.69E-46 |
MS.gene057310 | MS.gene22209 | 0.804171 | 2.46E-49 | -1.69E-46 |
MS.gene057331 | MS.gene22209 | 0.854212 | 1.43E-61 | -1.69E-46 |
MS.gene05733 | MS.gene22209 | 0.803373 | 3.60E-49 | -1.69E-46 |
MS.gene05735 | MS.gene22209 | 0.828928 | 6.84E-55 | -1.69E-46 |
MS.gene057416 | MS.gene22209 | 0.874825 | 4.99E-68 | -1.69E-46 |
MS.gene057448 | MS.gene22209 | 0.835486 | 1.63E-56 | -1.69E-46 |
MS.gene057449 | MS.gene22209 | 0.833394 | 5.47E-56 | -1.69E-46 |
MS.gene057450 | MS.gene22209 | 0.838243 | 3.23E-57 | -1.69E-46 |
MS.gene057734 | MS.gene22209 | 0.835956 | 1.24E-56 | -1.69E-46 |
MS.gene057749 | MS.gene22209 | 0.844906 | 5.66E-59 | -1.69E-46 |
MS.gene057779 | MS.gene22209 | 0.814458 | 1.53E-51 | -1.69E-46 |
MS.gene057796 | MS.gene22209 | 0.817136 | 3.86E-52 | -1.69E-46 |
MS.gene057799 | MS.gene22209 | 0.802056 | 6.72E-49 | -1.69E-46 |
MS.gene057823 | MS.gene22209 | 0.849769 | 2.61E-60 | -1.69E-46 |
MS.gene057856 | MS.gene22209 | 0.821178 | 4.63E-53 | -1.69E-46 |
MS.gene057926 | MS.gene22209 | 0.831659 | 1.47E-55 | -1.69E-46 |
MS.gene057927 | MS.gene22209 | 0.816674 | 4.90E-52 | -1.69E-46 |
MS.gene058002 | MS.gene22209 | 0.814659 | 1.38E-51 | -1.69E-46 |
MS.gene058006 | MS.gene22209 | 0.8559 | 4.62E-62 | -1.69E-46 |
MS.gene058007 | MS.gene22209 | 0.848376 | 6.38E-60 | -1.69E-46 |
MS.gene058019 | MS.gene22209 | 0.852424 | 4.66E-61 | -1.69E-46 |
MS.gene058075 | MS.gene22209 | 0.813873 | 2.05E-51 | -1.69E-46 |
MS.gene058082 | MS.gene22209 | 0.806723 | 7.16E-50 | -1.69E-46 |
MS.gene05811 | MS.gene22209 | 0.840598 | 7.90E-58 | -1.69E-46 |
MS.gene058130 | MS.gene22209 | 0.816851 | 4.47E-52 | -1.69E-46 |
MS.gene058233 | MS.gene22209 | 0.816178 | 6.32E-52 | -1.69E-46 |
MS.gene058293 | MS.gene22209 | 0.845358 | 4.27E-59 | -1.69E-46 |
MS.gene058323 | MS.gene22209 | 0.81875 | 1.67E-52 | -1.69E-46 |
MS.gene058365 | MS.gene22209 | 0.808651 | 2.79E-50 | -1.69E-46 |
MS.gene058376 | MS.gene22209 | 0.830695 | 2.54E-55 | -1.69E-46 |
MS.gene058419 | MS.gene22209 | 0.814303 | 1.65E-51 | -1.69E-46 |
MS.gene05842 | MS.gene22209 | 0.803972 | 2.70E-49 | -1.69E-46 |
MS.gene058444 | MS.gene22209 | 0.812395 | 4.33E-51 | -1.69E-46 |
MS.gene058459 | MS.gene22209 | 0.806913 | 6.53E-50 | -1.69E-46 |
MS.gene058660 | MS.gene22209 | 0.897159 | 1.84E-76 | -1.69E-46 |
MS.gene058700 | MS.gene22209 | 0.835356 | 1.76E-56 | -1.69E-46 |
MS.gene058723 | MS.gene22209 | 0.804164 | 2.46E-49 | -1.69E-46 |
MS.gene05883 | MS.gene22209 | 0.824429 | 8.11E-54 | -1.69E-46 |
MS.gene05886 | MS.gene22209 | 0.813467 | 2.52E-51 | -1.69E-46 |
MS.gene058928 | MS.gene22209 | 0.876018 | 1.95E-68 | -1.69E-46 |
MS.gene058993 | MS.gene22209 | 0.816108 | 6.56E-52 | -1.69E-46 |
MS.gene058995 | MS.gene22209 | 0.827945 | 1.18E-54 | -1.69E-46 |
MS.gene059029 | MS.gene22209 | 0.816752 | 4.70E-52 | -1.69E-46 |
MS.gene05907 | MS.gene22209 | 0.875461 | 3.03E-68 | -1.69E-46 |
MS.gene05913 | MS.gene22209 | 0.805652 | 1.20E-49 | -1.69E-46 |
MS.gene059141 | MS.gene22209 | 0.805531 | 1.28E-49 | -1.69E-46 |
MS.gene059294 | MS.gene22209 | 0.847012 | 1.51E-59 | -1.69E-46 |
MS.gene059326 | MS.gene22209 | 0.807234 | 5.58E-50 | -1.69E-46 |
MS.gene05934 | MS.gene22209 | 0.844076 | 9.46E-59 | -1.69E-46 |
MS.gene059366 | MS.gene22209 | 0.862109 | 6.39E-64 | -1.69E-46 |
MS.gene059368 | MS.gene22209 | 0.815993 | 6.95E-52 | -1.69E-46 |
MS.gene059420 | MS.gene22209 | 0.836108 | 1.14E-56 | -1.69E-46 |
MS.gene059455 | MS.gene22209 | 0.826131 | 3.21E-54 | -1.69E-46 |
MS.gene059536 | MS.gene22209 | 0.886947 | 2.19E-72 | -1.69E-46 |
MS.gene059597 | MS.gene22209 | 0.849273 | 3.59E-60 | -1.69E-46 |
MS.gene05959 | MS.gene22209 | 0.808092 | 3.67E-50 | -1.69E-46 |
MS.gene059674 | MS.gene22209 | 0.838116 | 3.48E-57 | -1.69E-46 |
MS.gene059676 | MS.gene22209 | 0.876282 | 1.58E-68 | -1.69E-46 |
MS.gene059688 | MS.gene22209 | 0.917304 | 6.25E-86 | -1.69E-46 |
MS.gene059692 | MS.gene22209 | 0.902039 | 1.46E-78 | -1.69E-46 |
MS.gene059695 | MS.gene22209 | 0.89948 | 1.90E-77 | -1.69E-46 |
MS.gene059711 | MS.gene22209 | 0.876572 | 1.26E-68 | -1.69E-46 |
MS.gene059718 | MS.gene22209 | 0.812016 | 5.24E-51 | -1.69E-46 |
MS.gene059807 | MS.gene22209 | 0.870312 | 1.60E-66 | -1.69E-46 |
MS.gene05984 | MS.gene22209 | 0.825525 | 4.47E-54 | -1.69E-46 |
MS.gene05986 | MS.gene22209 | 0.807806 | 4.22E-50 | -1.69E-46 |
MS.gene059894 | MS.gene22209 | 0.803642 | 3.16E-49 | -1.69E-46 |
MS.gene059902 | MS.gene22209 | 0.868669 | 5.50E-66 | -1.69E-46 |
MS.gene059960 | MS.gene22209 | 0.860364 | 2.17E-63 | -1.69E-46 |
MS.gene059974 | MS.gene22209 | 0.81353 | 2.44E-51 | -1.69E-46 |
MS.gene060005 | MS.gene22209 | 0.800875 | 1.17E-48 | -1.69E-46 |
MS.gene060193 | MS.gene22209 | 0.824873 | 6.38E-54 | -1.69E-46 |
MS.gene060372 | MS.gene22209 | 0.801968 | 7.01E-49 | -1.69E-46 |
MS.gene06037 | MS.gene22209 | 0.826476 | 2.66E-54 | -1.69E-46 |
MS.gene060403 | MS.gene22209 | 0.869108 | 3.96E-66 | -1.69E-46 |
MS.gene060804 | MS.gene22209 | 0.894655 | 2.01E-75 | -1.69E-46 |
MS.gene060818 | MS.gene22209 | 0.891243 | 4.75E-74 | -1.69E-46 |
MS.gene060835 | MS.gene22209 | 0.843563 | 1.30E-58 | -1.69E-46 |
MS.gene060837 | MS.gene22209 | 0.8853 | 9.16E-72 | -1.69E-46 |
MS.gene06092 | MS.gene22209 | 0.809608 | 1.74E-50 | -1.69E-46 |
MS.gene061041 | MS.gene22209 | 0.873043 | 2.00E-67 | -1.69E-46 |
MS.gene061049 | MS.gene22209 | 0.844557 | 7.02E-59 | -1.69E-46 |
MS.gene061051 | MS.gene22209 | -0.845433 | 4.07E-59 | -1.69E-46 |
MS.gene061134 | MS.gene22209 | 0.822781 | 1.97E-53 | -1.69E-46 |
MS.gene061154 | MS.gene22209 | 0.838556 | 2.68E-57 | -1.69E-46 |
MS.gene061200 | MS.gene22209 | 0.876079 | 1.86E-68 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22209.t1 | MTR_3g450510 | 98.228 | 395 | 7 | 0 | 1 | 395 | 1 | 395 | 0.0 | 806 |
MS.gene22209.t1 | MTR_5g090780 | 79.899 | 398 | 67 | 4 | 1 | 395 | 1 | 388 | 0.0 | 648 |
MS.gene22209.t1 | MTR_5g076620 | 76.696 | 339 | 75 | 1 | 50 | 388 | 95 | 429 | 0.0 | 539 |
MS.gene22209.t1 | MTR_5g076620 | 76.817 | 289 | 63 | 1 | 50 | 338 | 95 | 379 | 4.02e-163 | 463 |
MS.gene22209.t1 | MTR_3g083630 | 69.395 | 281 | 86 | 0 | 98 | 378 | 87 | 367 | 1.00e-152 | 437 |
MS.gene22209.t1 | MTR_3g083650 | 61.972 | 71 | 27 | 0 | 124 | 194 | 1 | 71 | 6.78e-27 | 102 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22209.t1 | AT5G17230 | 76.420 | 352 | 78 | 2 | 29 | 378 | 59 | 407 | 0.0 | 552 |
MS.gene22209.t1 | AT5G17230 | 76.420 | 352 | 78 | 2 | 29 | 378 | 59 | 407 | 0.0 | 552 |
MS.gene22209.t1 | AT5G17230 | 76.420 | 352 | 78 | 2 | 29 | 378 | 59 | 407 | 0.0 | 552 |
MS.gene22209.t1 | AT5G17230 | 73.297 | 367 | 78 | 3 | 29 | 378 | 59 | 422 | 0.0 | 542 |
Find 88 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGATGTCTGGTGTTCTTCTT+TGG | 0.203427 | 3.4:-40480913 | MS.gene22209:CDS |
TGTTCATCTTGTAGTCATTT+TGG | 0.206973 | 3.4:+40477296 | None:intergenic |
CCTTCAATCATGTCTTTAAA+TGG | 0.223849 | 3.4:+40478178 | None:intergenic |
AGAGAATGCCATTTCCTTAA+TGG | 0.264096 | 3.4:-40480873 | MS.gene22209:CDS |
TCTTCCTCCAAGACCCATTA+AGG | 0.297295 | 3.4:+40480859 | None:intergenic |
GAGAATGCCATTTCCTTAAT+GGG | 0.302605 | 3.4:-40480872 | MS.gene22209:CDS |
CTAATTAGACATACCGTAAA+TGG | 0.307530 | 3.4:+40479704 | None:intergenic |
CAGCAAGTAGATGGCCTGTT+TGG | 0.307680 | 3.4:-40477470 | MS.gene22209:CDS |
TTGTCACTTCCTGTTGCTCT+TGG | 0.311897 | 3.4:-40477348 | MS.gene22209:CDS |
GATGCTCTCTGTTGAAGCTT+TGG | 0.337629 | 3.4:+40478033 | None:intergenic |
CTTATGAGTGTTCCTGTAAT+GGG | 0.347887 | 3.4:-40478070 | MS.gene22209:CDS |
GCCATTTCCTTAATGGGTCT+TGG | 0.351168 | 3.4:-40480866 | MS.gene22209:CDS |
TGTGGTTCTATCCCCATTAC+AGG | 0.351831 | 3.4:+40478058 | None:intergenic |
AGGAGGTTTAGACATTGTTC+TGG | 0.362139 | 3.4:-40480821 | MS.gene22209:CDS |
TCCCATCTGTCCAAGGCCTT+TGG | 0.363807 | 3.4:+40479540 | None:intergenic |
CATGAAATTGCGCCATTTGT+CGG | 0.363909 | 3.4:+40477560 | None:intergenic |
GGGCATCTTTGCTGTTGTAT+AGG | 0.372606 | 3.4:-40477449 | MS.gene22209:CDS |
CTATATTGCTACTATGTTGC+TGG | 0.386898 | 3.4:-40478103 | MS.gene22209:CDS |
GATGTCTGGTGTTCTTCTTT+GGG | 0.389571 | 3.4:-40480912 | MS.gene22209:CDS |
CAGCAACATAGTAGCAATAT+AGG | 0.392016 | 3.4:+40478104 | None:intergenic |
AGCAAGTAGATGGCCTGTTT+GGG | 0.395898 | 3.4:-40477469 | MS.gene22209:CDS |
TAACCTACCTGTATATCAAC+AGG | 0.395934 | 3.4:+40479438 | None:intergenic |
AAAGCCATATGGGCCATTTA+CGG | 0.401396 | 3.4:-40479717 | MS.gene22209:intron |
CTCTCCTCTGAGGATCTTGT+AGG | 0.415075 | 3.4:+40480761 | None:intergenic |
GCTCTTGGAATAGCAACGTT+TGG | 0.415641 | 3.4:-40477333 | MS.gene22209:CDS |
TTGGTGAAATCACCTTCAAT+AGG | 0.419066 | 3.4:+40480650 | None:intergenic |
TCCAAGACCCATTAAGGAAA+TGG | 0.420248 | 3.4:+40480865 | None:intergenic |
AGCTCAGTTCAGCAAGTAGA+TGG | 0.427080 | 3.4:-40477479 | MS.gene22209:CDS |
GTACCTTCCGCAAGATGAAT+TGG | 0.429606 | 3.4:-40477628 | MS.gene22209:CDS |
TGTTCTATTCCTAAGATGTC+TGG | 0.436560 | 3.4:-40480926 | None:intergenic |
CCTTATGAGTGTTCCTGTAA+TGG | 0.441118 | 3.4:-40478071 | MS.gene22209:CDS |
ACTATAATAACTTCACCAAA+CGG | 0.449049 | 3.4:-40477398 | MS.gene22209:CDS |
CATACCGTAAATGGCCCATA+TGG | 0.458649 | 3.4:+40479713 | None:intergenic |
AAAGTACCCTGTTGATATAC+AGG | 0.460407 | 3.4:-40479445 | MS.gene22209:intron |
GTTCTTCTTTGGGTGAATTG+TGG | 0.464290 | 3.4:-40480902 | MS.gene22209:CDS |
GGTGTGATGTGTGAAGCATT+AGG | 0.465088 | 3.4:+40479561 | None:intergenic |
AAGAGAGAAGAAAAGCCATA+TGG | 0.465862 | 3.4:-40479728 | MS.gene22209:CDS |
GTTGCTATTCCAAGAGCAAC+AGG | 0.466089 | 3.4:+40477339 | None:intergenic |
TACTATGTTGCTGGGACAGT+GGG | 0.466882 | 3.4:-40478094 | MS.gene22209:CDS |
AACAGCAAAGATGCCCAAAC+AGG | 0.470763 | 3.4:+40477456 | None:intergenic |
ACACATCACACCAAAGGCCT+TGG | 0.473491 | 3.4:-40479550 | MS.gene22209:CDS |
CTATAATAACTTCACCAAAC+GGG | 0.476146 | 3.4:-40477397 | MS.gene22209:CDS |
TTGGATGATAAGCCTATTGA+AGG | 0.477265 | 3.4:-40480662 | MS.gene22209:CDS |
TACAATGCTGCATTGGCACT+TGG | 0.478711 | 3.4:-40478010 | MS.gene22209:CDS |
CACCAAAGGCCTTGGACAGA+TGG | 0.481447 | 3.4:-40479542 | MS.gene22209:CDS |
CCATTTAAAGACATGATTGA+AGG | 0.482461 | 3.4:-40478178 | MS.gene22209:CDS |
TATATTGCTACTATGTTGCT+GGG | 0.496318 | 3.4:-40478102 | MS.gene22209:CDS |
GCAGCATCATACATATCATA+AGG | 0.497935 | 3.4:+40479486 | None:intergenic |
TCTGTTGAAGCTTTGGATTG+TGG | 0.503008 | 3.4:+40478040 | None:intergenic |
TTGAAGGTGATTTCACCAAT+GGG | 0.504638 | 3.4:-40480646 | MS.gene22209:CDS |
CAGAAGAACAGATGAGTTAG+TGG | 0.511011 | 3.4:-40479589 | MS.gene22209:CDS |
CCATTACAGGAACACTCATA+AGG | 0.511875 | 3.4:+40478071 | None:intergenic |
CAAGATGAATTGGCACAAGC+TGG | 0.511937 | 3.4:-40477618 | MS.gene22209:CDS |
AAGACATGATTGAAGGGATG+AGG | 0.513888 | 3.4:-40478171 | MS.gene22209:CDS |
ATTGAAGGTGATTTCACCAA+TGG | 0.516585 | 3.4:-40480647 | MS.gene22209:CDS |
CATGATTGAAGGGATGAGGC+TGG | 0.519563 | 3.4:-40478167 | MS.gene22209:CDS |
TCTTTGTTCCCATCTGTCCA+AGG | 0.520607 | 3.4:+40479533 | None:intergenic |
CTACTATGTTGCTGGGACAG+TGG | 0.529274 | 3.4:-40478095 | MS.gene22209:CDS |
GAGGCAGAGTAACCGACAAA+TGG | 0.531514 | 3.4:-40477572 | MS.gene22209:CDS |
ATTTCCTTAATGGGTCTTGG+AGG | 0.532616 | 3.4:-40480863 | MS.gene22209:CDS |
ACCAAAGGCCTTGGACAGAT+GGG | 0.533995 | 3.4:-40479541 | MS.gene22209:CDS |
CATTTAAAGACATGATTGAA+GGG | 0.534248 | 3.4:-40478177 | MS.gene22209:CDS |
TTCACCAAACGGGCTTATGT+AGG | 0.535111 | 3.4:-40477387 | MS.gene22209:CDS |
AGAGAGAAGAAAAGCCATAT+GGG | 0.536115 | 3.4:-40479727 | MS.gene22209:CDS |
TACAAGATCCTCAGAGGAGA+GGG | 0.538242 | 3.4:-40480759 | MS.gene22209:CDS |
GAGCATCTACAATGCTGCAT+TGG | 0.547623 | 3.4:-40478017 | MS.gene22209:CDS |
CAAATGGCGCAATTTCATGA+AGG | 0.578152 | 3.4:-40477556 | MS.gene22209:CDS |
GAAGAGATGTAAGAACTCAA+AGG | 0.580755 | 3.4:-40480841 | MS.gene22209:CDS |
GTGCCAATTCATCTTGCGGA+AGG | 0.588837 | 3.4:+40477625 | None:intergenic |
TCCAACGTCTCTAAGTATGT+TGG | 0.590935 | 3.4:+40477970 | None:intergenic |
AGAACTCAAAAGTTCCCCAT+TGG | 0.594991 | 3.4:+40480631 | None:intergenic |
GCTTGTGCCAATTCATCTTG+CGG | 0.595244 | 3.4:+40477621 | None:intergenic |
AGGGTCAAATAAAGAGAGCA+AGG | 0.603555 | 3.4:-40477536 | MS.gene22209:CDS |
ACCAACATACTTAGAGACGT+TGG | 0.613097 | 3.4:-40477971 | MS.gene22209:CDS |
AGAACAGATGAGTTAGTGGA+TGG | 0.619649 | 3.4:-40479585 | MS.gene22209:CDS |
AAATGGCGCAATTTCATGAA+GGG | 0.620886 | 3.4:-40477555 | MS.gene22209:CDS |
AGAGGAGAGGGTGTATGAAG+TGG | 0.622701 | 3.4:-40480747 | MS.gene22209:CDS |
TTATGAGTGTTCCTGTAATG+GGG | 0.627271 | 3.4:-40478069 | MS.gene22209:CDS |
TGCTTCACACATCACACCAA+AGG | 0.631660 | 3.4:-40479556 | MS.gene22209:CDS |
AGTTCTGCTTATGATAGATG+TGG | 0.632966 | 3.4:-40480614 | MS.gene22209:CDS |
CTACAAGATCCTCAGAGGAG+AGG | 0.648794 | 3.4:-40480760 | MS.gene22209:CDS |
TCGTCTTATAGTGCTAGAAG+AGG | 0.652452 | 3.4:-40477657 | MS.gene22209:intron |
GAAGCAAGCAGCTCTAGTGA+AGG | 0.652466 | 3.4:-40480720 | MS.gene22209:CDS |
TTCATACACCCTCTCCTCTG+AGG | 0.670132 | 3.4:+40480751 | None:intergenic |
GAGATGTAAGAACTCAAAGG+AGG | 0.681375 | 3.4:-40480838 | MS.gene22209:CDS |
TGAAGGTGATTTCACCAATG+GGG | 0.696835 | 3.4:-40480645 | MS.gene22209:CDS |
AACCTACCTGTATATCAACA+GGG | 0.701397 | 3.4:+40479439 | None:intergenic |
TGAACCTACAAGATCCTCAG+AGG | 0.724557 | 3.4:-40480765 | MS.gene22209:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTTAACCATATTTATTA+TGG | - | chr3.4:40480452-40480471 | MS.gene22209:intron | 10.0% |
!!! | ATTTTGTTATTTTTTGAAAA+GGG | + | chr3.4:40479668-40479687 | None:intergenic | 10.0% |
!! | TATCAAGATACAATATAAAT+GGG | + | chr3.4:40477693-40477712 | None:intergenic | 15.0% |
!! | TTATCAAGATACAATATAAA+TGG | + | chr3.4:40477694-40477713 | None:intergenic | 15.0% |
!!! | ATTTAGCATTATTTTTGTTT+TGG | + | chr3.4:40479422-40479441 | None:intergenic | 15.0% |
!!! | ATTTATGTATATGTATTTTG+TGG | + | chr3.4:40479491-40479510 | None:intergenic | 15.0% |
!!! | GATTTTGTTATTTTTTGAAA+AGG | + | chr3.4:40479669-40479688 | None:intergenic | 15.0% |
!!! | TATAATTTTTGAAGGTATAA+AGG | + | chr3.4:40478840-40478859 | None:intergenic | 15.0% |
!!! | TTATAATTTTGTCAAAATCA+CGG | + | chr3.4:40478166-40478185 | None:intergenic | 15.0% |
!!! | TTGATAACATGAATATTTTT+TGG | - | chr3.4:40477707-40477726 | MS.gene22209:intron | 15.0% |
!! | AAATTTCACATTTCAACTTT+GGG | + | chr3.4:40478815-40478834 | None:intergenic | 20.0% |
!! | AATTTAGACGATATATCATA+GGG | - | chr3.4:40477868-40477887 | MS.gene22209:intron | 20.0% |
!! | ACCATCTTAAAATTTGTATT+TGG | + | chr3.4:40479126-40479145 | None:intergenic | 20.0% |
!! | AGAAAAGATATTAAAAAGAG+AGG | - | chr3.4:40477518-40477537 | MS.gene22209:CDS | 20.0% |
!! | ATAAATATGACTTGAAAATG+TGG | - | chr3.4:40479855-40479874 | MS.gene22209:intron | 20.0% |
!! | GAATATGTTTGCTTAAAATT+AGG | - | chr3.4:40478910-40478929 | MS.gene22209:intron | 20.0% |
!! | TAAATTTCACATTTCAACTT+TGG | + | chr3.4:40478816-40478835 | None:intergenic | 20.0% |
!!! | GAAAAGTTGGTATATTTATA+GGG | - | chr3.4:40480420-40480439 | MS.gene22209:intron | 20.0% |
!!! | TATGCAAAGACATTTTATTT+AGG | - | chr3.4:40477635-40477654 | MS.gene22209:CDS | 20.0% |
!!! | TTTGAAGTTTTGATCAATAA+AGG | + | chr3.4:40478438-40478457 | None:intergenic | 20.0% |
! | AAATGAACATGTAACTAGTT+AGG | - | chr3.4:40479507-40479526 | MS.gene22209:CDS | 25.0% |
! | ACCATATTTATTATGGATGA+TGG | - | chr3.4:40480459-40480478 | MS.gene22209:intron | 25.0% |
! | ACTATAATAACTTCACCAAA+CGG | - | chr3.4:40480812-40480831 | MS.gene22209:CDS | 25.0% |
! | ATATTGTAAGTTTGAATTGG+CGG | + | chr3.4:40478353-40478372 | None:intergenic | 25.0% |
! | ATGCTAATTAATAGTTCAGT+CGG | + | chr3.4:40477986-40478005 | None:intergenic | 25.0% |
! | CATTAATTAGAAATCGAACT+CGG | - | chr3.4:40480319-40480338 | MS.gene22209:intron | 25.0% |
! | CATTTAAAGACATGATTGAA+GGG | - | chr3.4:40480033-40480052 | MS.gene22209:intron | 25.0% |
! | CTTCAAAATTTCTGTTACAA+AGG | - | chr3.4:40478532-40478551 | MS.gene22209:intron | 25.0% |
! | GAATTTAGACGATATATCAT+AGG | - | chr3.4:40477867-40477886 | MS.gene22209:intron | 25.0% |
! | GTAAGATATTGTCAAAAACA+CGG | - | chr3.4:40478301-40478320 | MS.gene22209:intron | 25.0% |
! | GTAATCAAGGTTATCAAAAT+CGG | - | chr3.4:40479246-40479265 | MS.gene22209:intron | 25.0% |
! | TAAAAAGAGAGGTTTGAATT+TGG | - | chr3.4:40477529-40477548 | MS.gene22209:CDS | 25.0% |
! | TAATCAAGGTTATCAAAATC+GGG | - | chr3.4:40479247-40479266 | MS.gene22209:intron | 25.0% |
! | TTTGCGAATATGTTACATAA+CGG | - | chr3.4:40478220-40478239 | MS.gene22209:intron | 25.0% |
!! | AAATTGATTTCATCTCTCTA+AGG | - | chr3.4:40478935-40478954 | MS.gene22209:intron | 25.0% |
!! | AAGACATCGTAAACTATTTT+TGG | + | chr3.4:40478040-40478059 | None:intergenic | 25.0% |
!! | AGAGACTATCTAAAATTTGA+TGG | - | chr3.4:40479149-40479168 | MS.gene22209:intron | 25.0% |
!! | AGTGAAAGAATGAAATGTTT+TGG | - | chr3.4:40479572-40479591 | MS.gene22209:CDS | 25.0% |
!! | CAACTAGCTATAATTTTTGA+AGG | + | chr3.4:40478848-40478867 | None:intergenic | 25.0% |
!! | GAGACTATCTAAAATTTGAT+GGG | - | chr3.4:40479150-40479169 | MS.gene22209:intron | 25.0% |
!! | GGGAAAAATCTAAAACAAAA+GGG | + | chr3.4:40477673-40477692 | None:intergenic | 25.0% |
!! | TATTGTATCTTGATTTTCTC+AGG | + | chr3.4:40480070-40480089 | None:intergenic | 25.0% |
!! | TGGGAAAAATCTAAAACAAA+AGG | + | chr3.4:40477674-40477693 | None:intergenic | 25.0% |
!! | TTGTCATTTAAGCAAATAGA+AGG | - | chr3.4:40479949-40479968 | MS.gene22209:intron | 25.0% |
!!! | AGATTAACTGATGTTTTTGA+AGG | - | chr3.4:40478697-40478716 | MS.gene22209:intron | 25.0% |
!!! | ATATGTTACATAACGGATTT+AGG | - | chr3.4:40478227-40478246 | MS.gene22209:intron | 25.0% |
!!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr3.4:40480419-40480438 | MS.gene22209:intron | 25.0% |
!!! | CTAATTTTTTCTTGTTTCCA+TGG | - | chr3.4:40480530-40480549 | MS.gene22209:intron | 25.0% |
!!! | GCCAAATACAAATTTTAAGA+TGG | - | chr3.4:40479122-40479141 | MS.gene22209:intron | 25.0% |
!!! | TATGTTACATAACGGATTTA+GGG | - | chr3.4:40478228-40478247 | MS.gene22209:intron | 25.0% |
!!! | TCATTTTGGTTAACTTTTGT+GGG | + | chr3.4:40480903-40480922 | None:intergenic | 25.0% |
AAAATCGCAATCAAAATCGA+AGG | - | chr3.4:40479313-40479332 | MS.gene22209:intron | 30.0% | |
AGACATGTGGTTATAATTAG+AGG | - | chr3.4:40480388-40480407 | MS.gene22209:intron | 30.0% | |
ATGAAATTTGAACCGATATG+TGG | + | chr3.4:40477808-40477827 | None:intergenic | 30.0% | |
CACTGTAATAATACATAGAG+TGG | + | chr3.4:40478596-40478615 | None:intergenic | 30.0% | |
CCATTTAAAGACATGATTGA+AGG | - | chr3.4:40480032-40480051 | MS.gene22209:intron | 30.0% | |
CCTTCAATCATGTCTTTAAA+TGG | + | chr3.4:40480035-40480054 | None:intergenic | 30.0% | |
CTAATTAGACATACCGTAAA+TGG | + | chr3.4:40478509-40478528 | None:intergenic | 30.0% | |
CTATAATAACTTCACCAAAC+GGG | - | chr3.4:40480813-40480832 | MS.gene22209:CDS | 30.0% | |
CTCTATGTATTATTACAGTG+TGG | - | chr3.4:40478596-40478615 | MS.gene22209:intron | 30.0% | |
CTTGTATGACACACATATAA+GGG | - | chr3.4:40478962-40478981 | MS.gene22209:intron | 30.0% | |
GAAAAATGTCATCATCTGAT+AGG | + | chr3.4:40480618-40480637 | None:intergenic | 30.0% | |
GACTGAACTATTAATTAGCA+TGG | - | chr3.4:40477985-40478004 | MS.gene22209:CDS | 30.0% | |
GATCAATAAAGGACGAATAA+AGG | + | chr3.4:40478427-40478446 | None:intergenic | 30.0% | |
GCCAATTCAAACTTACAATA+TGG | - | chr3.4:40478352-40478371 | MS.gene22209:intron | 30.0% | |
GCCATATTGTAAGTTTGAAT+TGG | + | chr3.4:40478356-40478375 | None:intergenic | 30.0% | |
GCCATCATCCATAATAAATA+TGG | + | chr3.4:40480463-40480482 | None:intergenic | 30.0% | |
GTATTTATAGAACTGGATCA+TGG | - | chr3.4:40479603-40479622 | MS.gene22209:intron | 30.0% | |
TAAAATCGCAATCAAAATCG+AGG | - | chr3.4:40479312-40479331 | MS.gene22209:intron | 30.0% | |
TAATTAATAGTTCAGTCGGA+AGG | + | chr3.4:40477982-40478001 | None:intergenic | 30.0% | |
TATATTGCTACTATGTTGCT+GGG | - | chr3.4:40480108-40480127 | MS.gene22209:intron | 30.0% | |
TCTCTATCGAACTACTTATA+TGG | + | chr3.4:40478129-40478148 | None:intergenic | 30.0% | |
TCTTAAAACGTGTCATAAGT+GGG | - | chr3.4:40479056-40479075 | MS.gene22209:intron | 30.0% | |
TGATCAAAACTTCAAATCTC+AGG | - | chr3.4:40478442-40478461 | MS.gene22209:intron | 30.0% | |
! | AAATCGAAGGATTTTACTCA+AGG | - | chr3.4:40479326-40479345 | MS.gene22209:intron | 30.0% |
! | ATGTAAAGAAGCTTTAGTCA+TGG | - | chr3.4:40477762-40477781 | MS.gene22209:intron | 30.0% |
! | ATTTGAGTTCAAATCCTAAC+TGG | - | chr3.4:40477930-40477949 | MS.gene22209:intron | 30.0% |
! | GACTTTTGTAGAATCGATAT+AGG | - | chr3.4:40479348-40479367 | MS.gene22209:intron | 30.0% |
! | TTTAGAGCTTCAACAAAACA+CGG | + | chr3.4:40478279-40478298 | None:intergenic | 30.0% |
!!! | AGGATTTTGATGGATTTTGA+AGG | + | chr3.4:40479691-40479710 | None:intergenic | 30.0% |
!!! | GTCATTTTGGTTAACTTTTG+TGG | + | chr3.4:40480904-40480923 | None:intergenic | 30.0% |
!!! | GTGAGTTTTGAAGAAAACAT+GGG | + | chr3.4:40480487-40480506 | None:intergenic | 30.0% |
!!! | TGTGAGTTTTGAAGAAAACA+TGG | + | chr3.4:40480488-40480507 | None:intergenic | 30.0% |
AAATGGCGCAATTTCATGAA+GGG | - | chr3.4:40480655-40480674 | MS.gene22209:CDS | 35.0% | |
AACCTACCTGTATATCAACA+GGG | + | chr3.4:40478774-40478793 | None:intergenic | 35.0% | |
AACTGGATCATGGATTCAAT+CGG | - | chr3.4:40479613-40479632 | MS.gene22209:intron | 35.0% | |
AAGAGAGAAGAAAAGCCATA+TGG | - | chr3.4:40478482-40478501 | MS.gene22209:intron | 35.0% | |
AATCGGGTCAATTTACAAAC+CGG | - | chr3.4:40479630-40479649 | MS.gene22209:intron | 35.0% | |
AGAACTCAAACTAGTCAATG+AGG | - | chr3.4:40478888-40478907 | MS.gene22209:intron | 35.0% | |
AGAGAGAAGAAAAGCCATAT+GGG | - | chr3.4:40478483-40478502 | MS.gene22209:intron | 35.0% | |
AGATGAACGTGTAACTATTG+AGG | - | chr3.4:40479548-40479567 | MS.gene22209:CDS | 35.0% | |
AGTTCTGCTTATGATAGATG+TGG | - | chr3.4:40477596-40477615 | MS.gene22209:CDS | 35.0% | |
ATCCTAACTGGAACAATCAT+CGG | - | chr3.4:40477942-40477961 | MS.gene22209:intron | 35.0% | |
ATTGAAGGTGATTTCACCAA+TGG | - | chr3.4:40477563-40477582 | MS.gene22209:CDS | 35.0% | |
CAGCAACATAGTAGCAATAT+AGG | + | chr3.4:40480109-40480128 | None:intergenic | 35.0% | |
CAGTTCTATAAATACCCACA+AGG | + | chr3.4:40479598-40479617 | None:intergenic | 35.0% | |
CTATATTGCTACTATGTTGC+TGG | - | chr3.4:40480107-40480126 | MS.gene22209:intron | 35.0% | |
CTTAACTTTGTACCGAAATG+TGG | - | chr3.4:40478057-40478076 | MS.gene22209:CDS | 35.0% | |
CTTATGAGTGTTCCTGTAAT+GGG | - | chr3.4:40480140-40480159 | MS.gene22209:intron | 35.0% | |
CTTGTGGGTATTTATAGAAC+TGG | - | chr3.4:40479596-40479615 | MS.gene22209:CDS | 35.0% | |
GAAGAGATGTAAGAACTCAA+AGG | - | chr3.4:40477369-40477388 | MS.gene22209:CDS | 35.0% | |
GACTTTACTTCAAGTCGAAA+GGG | - | chr3.4:40479269-40479288 | MS.gene22209:intron | 35.0% | |
GAGGAACTAAAACGAAAAGT+TGG | - | chr3.4:40480407-40480426 | MS.gene22209:intron | 35.0% | |
GCAGCATCATACATATCATA+AGG | + | chr3.4:40478727-40478746 | None:intergenic | 35.0% | |
GCTTGTATGACACACATATA+AGG | - | chr3.4:40478961-40478980 | MS.gene22209:intron | 35.0% | |
GGAGTCTTACATTGTAATCA+AGG | - | chr3.4:40479233-40479252 | MS.gene22209:intron | 35.0% | |
GTCTTAAAACGTGTCATAAG+TGG | - | chr3.4:40479055-40479074 | MS.gene22209:intron | 35.0% | |
TAAAACGATTGACGAGCAAA+AGG | + | chr3.4:40477907-40477926 | None:intergenic | 35.0% | |
TAACCTACCTGTATATCAAC+AGG | + | chr3.4:40478775-40478794 | None:intergenic | 35.0% | |
TCGATATAGGATAGCAAAGT+CGG | - | chr3.4:40479361-40479380 | MS.gene22209:intron | 35.0% | |
TTACAAAGGCTTCTCTAATG+TGG | - | chr3.4:40478546-40478565 | MS.gene22209:intron | 35.0% | |
TTATGAGTGTTCCTGTAATG+GGG | - | chr3.4:40480141-40480160 | MS.gene22209:intron | 35.0% | |
TTCCACTAGAATCAACCAAA+AGG | + | chr3.4:40477843-40477862 | None:intergenic | 35.0% | |
TTGAAGGTGATTTCACCAAT+GGG | - | chr3.4:40477564-40477583 | MS.gene22209:CDS | 35.0% | |
TTGGATGATAAGCCTATTGA+AGG | - | chr3.4:40477548-40477567 | MS.gene22209:CDS | 35.0% | |
TTGGTGAAATCACCTTCAAT+AGG | + | chr3.4:40477563-40477582 | None:intergenic | 35.0% | |
! | AAAAATGACTTGCAAGACGA+AGG | + | chr3.4:40479894-40479913 | None:intergenic | 35.0% |
! | AAAAGGGTCAATTTTTGACC+CGG | + | chr3.4:40479652-40479671 | None:intergenic | 35.0% |
! | AAAGTACCCTGTTGATATAC+AGG | - | chr3.4:40478765-40478784 | MS.gene22209:intron | 35.0% |
! | AACTTACAAGCCAGTTGTTT+TGG | - | chr3.4:40479090-40479109 | MS.gene22209:intron | 35.0% |
! | AGAGAATGCCATTTCCTTAA+TGG | - | chr3.4:40477337-40477356 | MS.gene22209:CDS | 35.0% |
! | ATTTCAAGTGTTCGATGTGA+TGG | - | chr3.4:40479203-40479222 | MS.gene22209:intron | 35.0% |
! | CAAAATCCTGCGATTTTGAA+CGG | - | chr3.4:40479702-40479721 | MS.gene22209:intron | 35.0% |
! | CATACGTTTATCTTGCCTTT+TGG | - | chr3.4:40477825-40477844 | MS.gene22209:intron | 35.0% |
! | CTCTAGAAGTAACCACATAT+CGG | - | chr3.4:40477793-40477812 | MS.gene22209:intron | 35.0% |
! | GAGAATGCCATTTCCTTAAT+GGG | - | chr3.4:40477338-40477357 | MS.gene22209:CDS | 35.0% |
! | GTGTCACTAGGATATTCTTT+CGG | + | chr3.4:40478097-40478116 | None:intergenic | 35.0% |
! | TCAAAATCGCAGGATTTTGA+TGG | + | chr3.4:40479701-40479720 | None:intergenic | 35.0% |
! | TCAGATGATGACATTTTTCG+AGG | - | chr3.4:40480619-40480638 | MS.gene22209:CDS | 35.0% |
!! | ACAACTGGCTTGTAAGTTTA+TGG | + | chr3.4:40479088-40479107 | None:intergenic | 35.0% |
!! | ACGGATTTCACGATTTTGAT+AGG | - | chr3.4:40479721-40479740 | MS.gene22209:CDS | 35.0% |
!!! | AATGAAATGTTTTGGCCTTG+TGG | - | chr3.4:40479580-40479599 | MS.gene22209:CDS | 35.0% |
!!! | AGCAAGGATGTTTTTTGATG+AGG | - | chr3.4:40480690-40480709 | MS.gene22209:CDS | 35.0% |
!!! | ATGAAATGTTTTGGCCTTGT+GGG | - | chr3.4:40479581-40479600 | MS.gene22209:CDS | 35.0% |
!!! | CTGTTTTTGAGACTTTGCTA+GGG | - | chr3.4:40479751-40479770 | MS.gene22209:intron | 35.0% |
!!! | TTTTTTGATGAGGCAGAGAA+GGG | - | chr3.4:40480700-40480719 | MS.gene22209:CDS | 35.0% |
AAAGCCATATGGGCCATTTA+CGG | - | chr3.4:40478493-40478512 | MS.gene22209:intron | 40.0% | |
AAGACATGATTGAAGGGATG+AGG | - | chr3.4:40480039-40480058 | MS.gene22209:intron | 40.0% | |
ACATTTCAACTTTGGGCATG+TGG | + | chr3.4:40478808-40478827 | None:intergenic | 40.0% | |
ACCAACATACTTAGAGACGT+TGG | - | chr3.4:40480239-40480258 | MS.gene22209:intron | 40.0% | |
ACCTTCATTCGTAGAAGAGA+TGG | + | chr3.4:40478012-40478031 | None:intergenic | 40.0% | |
ACTGGATCATGGATTCAATC+GGG | - | chr3.4:40479614-40479633 | MS.gene22209:intron | 40.0% | |
AGAACAGATGAGTTAGTGGA+TGG | - | chr3.4:40478625-40478644 | MS.gene22209:intron | 40.0% | |
AGAACTCAAAAGTTCCCCAT+TGG | + | chr3.4:40477582-40477601 | None:intergenic | 40.0% | |
AGGAGGTTTAGACATTGTTC+TGG | - | chr3.4:40477389-40477408 | MS.gene22209:CDS | 40.0% | |
AGGGTCAAATAAAGAGAGCA+AGG | - | chr3.4:40480674-40480693 | MS.gene22209:CDS | 40.0% | |
ATCGGGTCAATTTACAAACC+GGG | - | chr3.4:40479631-40479650 | MS.gene22209:intron | 40.0% | |
CAAATGGCGCAATTTCATGA+AGG | - | chr3.4:40480654-40480673 | MS.gene22209:CDS | 40.0% | |
CACGCGTGATTATGTTAAAC+TGG | - | chr3.4:40478327-40478346 | MS.gene22209:intron | 40.0% | |
CACTAGGATATTCTTTCGGT+AGG | + | chr3.4:40478093-40478112 | None:intergenic | 40.0% | |
CAGAAGAACAGATGAGTTAG+TGG | - | chr3.4:40478621-40478640 | MS.gene22209:intron | 40.0% | |
CATGAAATTGCGCCATTTGT+CGG | + | chr3.4:40480653-40480672 | None:intergenic | 40.0% | |
CCATTACAGGAACACTCATA+AGG | + | chr3.4:40480142-40480161 | None:intergenic | 40.0% | |
CCTAAATCAGCCAAAACAAC+TGG | + | chr3.4:40479103-40479122 | None:intergenic | 40.0% | |
CCTAGCAAAGTCTCAAAAAC+AGG | + | chr3.4:40479753-40479772 | None:intergenic | 40.0% | |
CCTTATGAGTGTTCCTGTAA+TGG | - | chr3.4:40480139-40480158 | MS.gene22209:intron | 40.0% | |
CGACTTAAGTCCAAAAATCC+AGG | + | chr3.4:40479812-40479831 | None:intergenic | 40.0% | |
CGATATAGGATAGCAAAGTC+GGG | - | chr3.4:40479362-40479381 | MS.gene22209:intron | 40.0% | |
CTGAAATGTAACCTGCAAGT+GGG | + | chr3.4:40479183-40479202 | None:intergenic | 40.0% | |
GAGATGTAAGAACTCAAAGG+AGG | - | chr3.4:40477372-40477391 | MS.gene22209:CDS | 40.0% | |
GGAAACTTGAGACCACATTT+CGG | + | chr3.4:40478072-40478091 | None:intergenic | 40.0% | |
GGACTTTACTTCAAGTCGAA+AGG | - | chr3.4:40479268-40479287 | MS.gene22209:intron | 40.0% | |
GTATGACACACATATAAGGG+TGG | - | chr3.4:40478965-40478984 | MS.gene22209:intron | 40.0% | |
GTTCTTCTTTGGGTGAATTG+TGG | - | chr3.4:40477308-40477327 | MS.gene22209:CDS | 40.0% | |
TACCCTGTTGATATACAGGT+AGG | - | chr3.4:40478769-40478788 | MS.gene22209:intron | 40.0% | |
TCCAACGTCTCTAAGTATGT+TGG | + | chr3.4:40480243-40480262 | None:intergenic | 40.0% | |
TCCAAGACCCATTAAGGAAA+TGG | + | chr3.4:40477348-40477367 | None:intergenic | 40.0% | |
TCCATCTCTTCTACGAATGA+AGG | - | chr3.4:40478008-40478027 | MS.gene22209:CDS | 40.0% | |
TCGTCTTATAGTGCTAGAAG+AGG | - | chr3.4:40480553-40480572 | MS.gene22209:intron | 40.0% | |
TGAAATCCGTTCAAAATCGC+AGG | + | chr3.4:40479711-40479730 | None:intergenic | 40.0% | |
TGAAGGTGATTTCACCAATG+GGG | - | chr3.4:40477565-40477584 | MS.gene22209:CDS | 40.0% | |
! | ATTTCCTTAATGGGTCTTGG+AGG | - | chr3.4:40477347-40477366 | MS.gene22209:CDS | 40.0% |
! | GTCGCAAAAACCTGGATTTT+TGG | - | chr3.4:40479799-40479818 | MS.gene22209:intron | 40.0% |
! | TCTGAAATGTAACCTGCAAG+TGG | + | chr3.4:40479184-40479203 | None:intergenic | 40.0% |
! | TGGATGATTGTAGTGTCACT+AGG | + | chr3.4:40478109-40478128 | None:intergenic | 40.0% |
! | TTTTCCTACATAAGCCCGTT+TGG | + | chr3.4:40480830-40480849 | None:intergenic | 40.0% |
!! | TCTGTTGAAGCTTTGGATTG+TGG | + | chr3.4:40480173-40480192 | None:intergenic | 40.0% |
!! | TGCCTTTTGGTTGATTCTAG+TGG | - | chr3.4:40477838-40477857 | MS.gene22209:intron | 40.0% |
!!! | CCAGTTGTTTTGGCTGATTT+AGG | - | chr3.4:40479100-40479119 | MS.gene22209:intron | 40.0% |
!!! | CCTGTTTTTGAGACTTTGCT+AGG | - | chr3.4:40479750-40479769 | MS.gene22209:intron | 40.0% |
!!! | GTTTTTTGATGAGGCAGAGA+AGG | - | chr3.4:40480699-40480718 | MS.gene22209:CDS | 40.0% |
AACAGCAAAGATGCCCAAAC+AGG | + | chr3.4:40480757-40480776 | None:intergenic | 45.0% | |
AAGCACTTGTGCTAGACATG+TGG | - | chr3.4:40480375-40480394 | MS.gene22209:intron | 45.0% | |
ACATGTCTAGCACAAGTGCT+TGG | + | chr3.4:40480376-40480395 | None:intergenic | 45.0% | |
AGAGTGGTCAGTTTCTACTG+AGG | + | chr3.4:40478580-40478599 | None:intergenic | 45.0% | |
AGCAAGTAGATGGCCTGTTT+GGG | - | chr3.4:40480741-40480760 | MS.gene22209:CDS | 45.0% | |
AGCTCAGTTCAGCAAGTAGA+TGG | - | chr3.4:40480731-40480750 | MS.gene22209:CDS | 45.0% | |
AGTGCTTGGTATGGAAAGTG+TGG | + | chr3.4:40480362-40480381 | None:intergenic | 45.0% | |
CAAGATGAATTGGCACAAGC+TGG | - | chr3.4:40480592-40480611 | MS.gene22209:CDS | 45.0% | |
CATACCGTAAATGGCCCATA+TGG | + | chr3.4:40478500-40478519 | None:intergenic | 45.0% | |
CTAGCACTATAAGACGACCA+TGG | + | chr3.4:40480550-40480569 | None:intergenic | 45.0% | |
GACCGATGATTGTTCCAGTT+AGG | + | chr3.4:40477947-40477966 | None:intergenic | 45.0% | |
GAGCATCTACAATGCTGCAT+TGG | - | chr3.4:40480193-40480212 | MS.gene22209:intron | 45.0% | |
GATGCTCTCTGTTGAAGCTT+TGG | + | chr3.4:40480180-40480199 | None:intergenic | 45.0% | |
GCTCTTGGAATAGCAACGTT+TGG | - | chr3.4:40480877-40480896 | MS.gene22209:CDS | 45.0% | |
GCTTGTGCCAATTCATCTTG+CGG | + | chr3.4:40480592-40480611 | None:intergenic | 45.0% | |
GTACCTTCCGCAAGATGAAT+TGG | - | chr3.4:40480582-40480601 | MS.gene22209:CDS | 45.0% | |
TACAAGATCCTCAGAGGAGA+GGG | - | chr3.4:40477451-40477470 | MS.gene22209:CDS | 45.0% | |
TACGCAAAGTCGCAAAAACC+TGG | - | chr3.4:40479791-40479810 | MS.gene22209:intron | 45.0% | |
TACTATGTTGCTGGGACAGT+GGG | - | chr3.4:40480116-40480135 | MS.gene22209:intron | 45.0% | |
TCGAAAGGGAGTAGCGAAAT+CGG | - | chr3.4:40479283-40479302 | MS.gene22209:intron | 45.0% | |
TCTAGCACAAGTGCTTGGTA+TGG | + | chr3.4:40480371-40480390 | None:intergenic | 45.0% | |
TCTTCCTCCAAGACCCATTA+AGG | + | chr3.4:40477354-40477373 | None:intergenic | 45.0% | |
TCTTTGTTCCCATCTGTCCA+AGG | + | chr3.4:40478680-40478699 | None:intergenic | 45.0% | |
TGAACCTACAAGATCCTCAG+AGG | - | chr3.4:40477445-40477464 | MS.gene22209:CDS | 45.0% | |
TGCTTCACACATCACACCAA+AGG | - | chr3.4:40478654-40478673 | MS.gene22209:intron | 45.0% | |
! | GCCATTTCCTTAATGGGTCT+TGG | - | chr3.4:40477344-40477363 | MS.gene22209:CDS | 45.0% |
! | GGCTTCTCTAATGTGGATTG+TGG | - | chr3.4:40478553-40478572 | MS.gene22209:intron | 45.0% |
! | GGTGTGATGTGTGAAGCATT+AGG | + | chr3.4:40478652-40478671 | None:intergenic | 45.0% |
! | GTTCGATGTGATGGAGTGTA+AGG | - | chr3.4:40479212-40479231 | MS.gene22209:intron | 45.0% |
! | GTTGCTATTCCAAGAGCAAC+AGG | + | chr3.4:40480874-40480893 | None:intergenic | 45.0% |
! | TACAATGCTGCATTGGCACT+TGG | - | chr3.4:40480200-40480219 | MS.gene22209:intron | 45.0% |
! | TGTGGTTCTATCCCCATTAC+AGG | + | chr3.4:40480155-40480174 | None:intergenic | 45.0% |
! | TTCACCAAACGGGCTTATGT+AGG | - | chr3.4:40480823-40480842 | MS.gene22209:CDS | 45.0% |
! | TTGTCACTTCCTGTTGCTCT+TGG | - | chr3.4:40480862-40480881 | MS.gene22209:CDS | 45.0% |
!! | GGGCATCTTTGCTGTTGTAT+AGG | - | chr3.4:40480761-40480780 | MS.gene22209:CDS | 45.0% |
ACACATCACACCAAAGGCCT+TGG | - | chr3.4:40478660-40478679 | MS.gene22209:intron | 50.0% | |
ACCAAAGGCCTTGGACAGAT+GGG | - | chr3.4:40478669-40478688 | MS.gene22209:intron | 50.0% | |
CAGCAAGTAGATGGCCTGTT+TGG | - | chr3.4:40480740-40480759 | MS.gene22209:CDS | 50.0% | |
CATGATTGAAGGGATGAGGC+TGG | - | chr3.4:40480043-40480062 | MS.gene22209:intron | 50.0% | |
CGAAAGGGAGTAGCGAAATC+GGG | - | chr3.4:40479284-40479303 | MS.gene22209:intron | 50.0% | |
CTACAAGATCCTCAGAGGAG+AGG | - | chr3.4:40477450-40477469 | MS.gene22209:CDS | 50.0% | |
CTACTATGTTGCTGGGACAG+TGG | - | chr3.4:40480115-40480134 | MS.gene22209:intron | 50.0% | |
GAGGCAGAGTAACCGACAAA+TGG | - | chr3.4:40480638-40480657 | MS.gene22209:CDS | 50.0% | |
GTGCCAATTCATCTTGCGGA+AGG | + | chr3.4:40480588-40480607 | None:intergenic | 50.0% | |
TTCATACACCCTCTCCTCTG+AGG | + | chr3.4:40477462-40477481 | None:intergenic | 50.0% | |
! | AGAGGAGAGGGTGTATGAAG+TGG | - | chr3.4:40477463-40477482 | MS.gene22209:CDS | 50.0% |
! | CTCTCCTCTGAGGATCTTGT+AGG | + | chr3.4:40477452-40477471 | None:intergenic | 50.0% |
! | GAAGCAAGCAGCTCTAGTGA+AGG | - | chr3.4:40477490-40477509 | MS.gene22209:CDS | 50.0% |
CACCAAAGGCCTTGGACAGA+TGG | - | chr3.4:40478668-40478687 | MS.gene22209:intron | 55.0% | |
TCCCATCTGTCCAAGGCCTT+TGG | + | chr3.4:40478673-40478692 | None:intergenic | 55.0% | |
TGGGACTCACACCCACTTGC+AGG | - | chr3.4:40479169-40479188 | MS.gene22209:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 40477299 | 40480933 | 40477299 | ID=MS.gene22209 |
chr3.4 | mRNA | 40477299 | 40480933 | 40477299 | ID=MS.gene22209.t1;Parent=MS.gene22209 |
chr3.4 | exon | 40480576 | 40480933 | 40480576 | ID=MS.gene22209.t1.exon1;Parent=MS.gene22209.t1 |
chr3.4 | CDS | 40480576 | 40480933 | 40480576 | ID=cds.MS.gene22209.t1;Parent=MS.gene22209.t1 |
chr3.4 | exon | 40479718 | 40479768 | 40479718 | ID=MS.gene22209.t1.exon2;Parent=MS.gene22209.t1 |
chr3.4 | CDS | 40479718 | 40479768 | 40479718 | ID=cds.MS.gene22209.t1;Parent=MS.gene22209.t1 |
chr3.4 | exon | 40479446 | 40479618 | 40479446 | ID=MS.gene22209.t1.exon3;Parent=MS.gene22209.t1 |
chr3.4 | CDS | 40479446 | 40479618 | 40479446 | ID=cds.MS.gene22209.t1;Parent=MS.gene22209.t1 |
chr3.4 | exon | 40477965 | 40478200 | 40477965 | ID=MS.gene22209.t1.exon4;Parent=MS.gene22209.t1 |
chr3.4 | CDS | 40477965 | 40478200 | 40477965 | ID=cds.MS.gene22209.t1;Parent=MS.gene22209.t1 |
chr3.4 | exon | 40477299 | 40477668 | 40477299 | ID=MS.gene22209.t1.exon5;Parent=MS.gene22209.t1 |
chr3.4 | CDS | 40477299 | 40477668 | 40477299 | ID=cds.MS.gene22209.t1;Parent=MS.gene22209.t1 |
Gene Sequence |
Protein sequence |