Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28267.t1 | XP_003599052.1 | 89.4 | 236 | 23 | 2 | 1 | 235 | 1 | 235 | 5.80E-104 | 387.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28267.t1 | Q8VYM4 | 67.8 | 202 | 59 | 3 | 40 | 235 | 52 | 253 | 9.7e-68 | 258.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28267.t1 | G7J1T1 | 89.4 | 236 | 23 | 2 | 1 | 235 | 1 | 235 | 4.2e-104 | 387.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene28267 | 0.802387 | 5.75E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene28267 | 0.873657 | 1.24E-67 | -1.69E-46 |
| MS.gene049222 | MS.gene28267 | 0.81558 | 8.59E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene28267 | 0.843902 | 1.05E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene28267 | 0.820887 | 5.41E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene28267 | 0.818988 | 1.47E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene28267 | -0.815465 | 9.12E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene28267 | 0.843676 | 1.21E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene28267 | 0.802623 | 5.14E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene28267 | 0.856143 | 3.93E-62 | -1.69E-46 |
| MS.gene049760 | MS.gene28267 | 0.81599 | 6.97E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene28267 | 0.821821 | 3.29E-53 | -1.69E-46 |
| MS.gene049828 | MS.gene28267 | 0.807292 | 5.43E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene28267 | 0.826878 | 2.13E-54 | -1.69E-46 |
| MS.gene050083 | MS.gene28267 | -0.807935 | 3.96E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene28267 | 0.867122 | 1.73E-65 | -1.69E-46 |
| MS.gene050165 | MS.gene28267 | 0.856795 | 2.53E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene28267 | 0.868242 | 7.55E-66 | -1.69E-46 |
| MS.gene050353 | MS.gene28267 | -0.806637 | 7.47E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene28267 | 0.833767 | 4.41E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene28267 | 0.846291 | 2.38E-59 | -1.69E-46 |
| MS.gene050475 | MS.gene28267 | -0.833316 | 5.72E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene28267 | 0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene050518 | MS.gene28267 | 0.808379 | 3.19E-50 | -1.69E-46 |
| MS.gene050541 | MS.gene28267 | -0.828935 | 6.82E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene28267 | 0.821228 | 4.51E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene28267 | 0.821028 | 5.02E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene28267 | 0.894967 | 1.50E-75 | -1.69E-46 |
| MS.gene050770 | MS.gene28267 | 0.898411 | 5.45E-77 | -1.69E-46 |
| MS.gene050772 | MS.gene28267 | 0.835664 | 1.47E-56 | -1.69E-46 |
| MS.gene05079 | MS.gene28267 | -0.83709 | 6.38E-57 | -1.69E-46 |
| MS.gene05100 | MS.gene28267 | 0.828996 | 6.59E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene28267 | 0.829875 | 4.03E-55 | -1.69E-46 |
| MS.gene051228 | MS.gene28267 | 0.893062 | 8.91E-75 | -1.69E-46 |
| MS.gene051434 | MS.gene28267 | 0.826851 | 2.16E-54 | -1.69E-46 |
| MS.gene051471 | MS.gene28267 | 0.823032 | 1.72E-53 | -1.69E-46 |
| MS.gene051617 | MS.gene28267 | 0.803096 | 4.10E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene28267 | 0.832382 | 9.76E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene28267 | 0.828414 | 9.11E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene28267 | 0.85154 | 8.31E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene28267 | 0.85868 | 6.98E-63 | -1.69E-46 |
| MS.gene051949 | MS.gene28267 | 0.85135 | 9.40E-61 | -1.69E-46 |
| MS.gene052078 | MS.gene28267 | 0.852791 | 3.66E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene28267 | 0.865132 | 7.37E-65 | -1.69E-46 |
| MS.gene052290 | MS.gene28267 | 0.880123 | 7.11E-70 | -1.69E-46 |
| MS.gene052310 | MS.gene28267 | 0.812614 | 3.88E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene28267 | 0.830021 | 3.71E-55 | -1.69E-46 |
| MS.gene052379 | MS.gene28267 | 0.895171 | 1.23E-75 | -1.69E-46 |
| MS.gene052484 | MS.gene28267 | 0.807986 | 3.87E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene28267 | 0.808597 | 2.86E-50 | -1.69E-46 |
| MS.gene052805 | MS.gene28267 | -0.81082 | 9.53E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene28267 | 0.858929 | 5.88E-63 | -1.69E-46 |
| MS.gene052872 | MS.gene28267 | 0.854781 | 9.79E-62 | -1.69E-46 |
| MS.gene052916 | MS.gene28267 | 0.817068 | 3.99E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene28267 | 0.900512 | 6.81E-78 | -1.69E-46 |
| MS.gene053103 | MS.gene28267 | 0.820495 | 6.66E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene28267 | 0.83701 | 6.69E-57 | -1.69E-46 |
| MS.gene053107 | MS.gene28267 | 0.815029 | 1.14E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene28267 | 0.818977 | 1.48E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene28267 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene28267 | 0.819046 | 1.43E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene28267 | 0.809709 | 1.65E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene28267 | 0.892217 | 1.94E-74 | -1.69E-46 |
| MS.gene053384 | MS.gene28267 | 0.85933 | 4.46E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene28267 | 0.850083 | 2.14E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene28267 | 0.832388 | 9.72E-56 | -1.69E-46 |
| MS.gene054376 | MS.gene28267 | 0.879896 | 8.57E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene28267 | 0.807632 | 4.60E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene28267 | 0.861683 | 8.63E-64 | -1.69E-46 |
| MS.gene054802 | MS.gene28267 | 0.883237 | 5.32E-71 | -1.69E-46 |
| MS.gene054803 | MS.gene28267 | 0.881762 | 1.83E-70 | -1.69E-46 |
| MS.gene054804 | MS.gene28267 | 0.886772 | 2.56E-72 | -1.69E-46 |
| MS.gene054955 | MS.gene28267 | 0.813995 | 1.93E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene28267 | 0.833986 | 3.89E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene28267 | 0.844525 | 7.16E-59 | -1.69E-46 |
| MS.gene055254 | MS.gene28267 | 0.890763 | 7.34E-74 | -1.69E-46 |
| MS.gene055277 | MS.gene28267 | 0.832041 | 1.19E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene28267 | 0.806582 | 7.67E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene28267 | 0.909255 | 6.97E-82 | -1.69E-46 |
| MS.gene055412 | MS.gene28267 | 0.813741 | 2.20E-51 | -1.69E-46 |
| MS.gene055497 | MS.gene28267 | -0.807704 | 4.44E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene28267 | 0.886534 | 3.15E-72 | -1.69E-46 |
| MS.gene055502 | MS.gene28267 | 0.815281 | 1.00E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene28267 | 0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene28267 | 0.846233 | 2.47E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene28267 | 0.844506 | 7.25E-59 | -1.69E-46 |
| MS.gene055647 | MS.gene28267 | 0.831201 | 1.91E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene28267 | 0.827312 | 1.68E-54 | -1.69E-46 |
| MS.gene055896 | MS.gene28267 | 0.832722 | 8.04E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene28267 | 0.875437 | 3.08E-68 | -1.69E-46 |
| MS.gene055941 | MS.gene28267 | 0.827754 | 1.31E-54 | -1.69E-46 |
| MS.gene055956 | MS.gene28267 | -0.811932 | 5.47E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene28267 | 0.834239 | 3.36E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene28267 | 0.828699 | 7.77E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene28267 | 0.822009 | 2.98E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene28267 | 0.808964 | 2.39E-50 | -1.69E-46 |
| MS.gene056549 | MS.gene28267 | 0.808211 | 3.46E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene28267 | 0.870431 | 1.47E-66 | -1.69E-46 |
| MS.gene056611 | MS.gene28267 | 0.803456 | 3.46E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene28267 | 0.831199 | 1.91E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene28267 | 0.815499 | 8.96E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene28267 | 0.821216 | 4.54E-53 | -1.69E-46 |
| MS.gene056903 | MS.gene28267 | 0.837549 | 4.87E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene28267 | 0.835973 | 1.23E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene28267 | 0.820158 | 7.95E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene28267 | 0.90145 | 2.65E-78 | -1.69E-46 |
| MS.gene057146 | MS.gene28267 | 0.825409 | 4.76E-54 | -1.69E-46 |
| MS.gene057246 | MS.gene28267 | 0.86205 | 6.67E-64 | -1.69E-46 |
| MS.gene057295 | MS.gene28267 | 0.830299 | 3.18E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene28267 | 0.817821 | 2.70E-52 | -1.69E-46 |
| MS.gene05735 | MS.gene28267 | 0.827688 | 1.36E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene28267 | 0.836702 | 8.01E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene28267 | 0.831303 | 1.80E-55 | -1.69E-46 |
| MS.gene058006 | MS.gene28267 | 0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene058082 | MS.gene28267 | 0.821608 | 3.69E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene28267 | 0.8308 | 2.39E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene28267 | 0.83719 | 6.01E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene28267 | 0.8247 | 7.00E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene28267 | 0.847054 | 1.47E-59 | -1.69E-46 |
| MS.gene058723 | MS.gene28267 | 0.854292 | 1.36E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene28267 | 0.845613 | 3.64E-59 | -1.69E-46 |
| MS.gene058903 | MS.gene28267 | 0.8239 | 1.08E-53 | -1.69E-46 |
| MS.gene058993 | MS.gene28267 | 0.840112 | 1.06E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene28267 | 0.810009 | 1.43E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene28267 | 0.875413 | 3.14E-68 | -1.69E-46 |
| MS.gene059079 | MS.gene28267 | 0.806806 | 6.88E-50 | -1.69E-46 |
| MS.gene059102 | MS.gene28267 | -0.826797 | 2.23E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene28267 | 0.853287 | 2.64E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene28267 | 0.834556 | 2.80E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene28267 | 0.857101 | 2.05E-62 | -1.69E-46 |
| MS.gene05959 | MS.gene28267 | 0.816467 | 5.45E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene28267 | 0.826276 | 2.96E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene28267 | 0.845105 | 5.00E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene28267 | 0.80832 | 3.28E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene28267 | 0.806609 | 7.57E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene28267 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene28267 | 0.835379 | 1.74E-56 | -1.69E-46 |
| MS.gene059858 | MS.gene28267 | 0.828696 | 7.79E-55 | -1.69E-46 |
| MS.gene05986 | MS.gene28267 | 0.806139 | 9.51E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene28267 | 0.860326 | 2.23E-63 | -1.69E-46 |
| MS.gene059960 | MS.gene28267 | 0.915123 | 8.55E-85 | -1.69E-46 |
| MS.gene060193 | MS.gene28267 | 0.817809 | 2.72E-52 | -1.69E-46 |
| MS.gene060336 | MS.gene28267 | -0.815539 | 8.78E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene28267 | 0.819904 | 9.09E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene28267 | 0.844506 | 7.25E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene28267 | 0.885208 | 9.92E-72 | -1.69E-46 |
| MS.gene06090 | MS.gene28267 | 0.800714 | 1.27E-48 | -1.69E-46 |
| MS.gene06092 | MS.gene28267 | 0.806737 | 7.11E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene28267 | 0.838637 | 2.55E-57 | -1.69E-46 |
| MS.gene061134 | MS.gene28267 | 0.803514 | 3.36E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene28267 | 0.855298 | 6.93E-62 | -1.69E-46 |
| MS.gene061200 | MS.gene28267 | 0.900263 | 8.73E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28267.t1 | MTR_3g027140 | 93.644 | 236 | 13 | 2 | 1 | 235 | 1 | 235 | 1.99e-157 | 436 |
| MS.gene28267.t1 | MTR_1g056520 | 42.614 | 176 | 101 | 0 | 60 | 235 | 108 | 283 | 5.57e-45 | 152 |
| MS.gene28267.t1 | MTR_7g106440 | 40.526 | 190 | 109 | 1 | 50 | 235 | 99 | 288 | 5.62e-43 | 147 |
| MS.gene28267.t1 | MTR_1g045510 | 39.429 | 175 | 98 | 1 | 61 | 235 | 114 | 280 | 3.26e-40 | 139 |
| MS.gene28267.t1 | MTR_3g075500 | 40.212 | 189 | 109 | 2 | 48 | 235 | 97 | 282 | 2.47e-34 | 124 |
| MS.gene28267.t1 | MTR_3g075500 | 39.241 | 79 | 48 | 0 | 59 | 137 | 205 | 283 | 8.64e-13 | 66.6 |
| MS.gene28267.t1 | MTR_1g064230 | 35.135 | 259 | 133 | 5 | 1 | 235 | 25 | 272 | 3.73e-34 | 124 |
| MS.gene28267.t1 | MTR_4g104470 | 38.286 | 175 | 103 | 2 | 61 | 235 | 123 | 292 | 1.25e-30 | 115 |
| MS.gene28267.t1 | MTR_4g104470 | 44.872 | 78 | 43 | 0 | 61 | 138 | 217 | 294 | 1.44e-16 | 77.4 |
| MS.gene28267.t1 | MTR_3g075500 | 40.110 | 182 | 100 | 3 | 48 | 228 | 97 | 270 | 1.89e-30 | 114 |
| MS.gene28267.t1 | MTR_4g124940 | 29.381 | 194 | 111 | 3 | 62 | 233 | 133 | 322 | 4.33e-17 | 79.7 |
| MS.gene28267.t1 | MTR_4g124940 | 31.492 | 181 | 110 | 4 | 55 | 235 | 41 | 207 | 1.22e-16 | 78.6 |
| MS.gene28267.t1 | MTR_8g022050 | 29.834 | 181 | 113 | 4 | 55 | 235 | 57 | 223 | 3.10e-15 | 74.3 |
| MS.gene28267.t1 | MTR_8g022050 | 28.218 | 202 | 118 | 5 | 55 | 233 | 142 | 339 | 6.28e-13 | 67.8 |
| MS.gene28267.t1 | MTR_6g040070 | 27.619 | 210 | 127 | 5 | 34 | 229 | 79 | 277 | 3.62e-15 | 74.7 |
| MS.gene28267.t1 | MTR_4g085540 | 28.070 | 171 | 111 | 2 | 62 | 232 | 36 | 194 | 6.30e-15 | 73.9 |
| MS.gene28267.t1 | MTR_4g085540 | 31.414 | 191 | 122 | 5 | 51 | 235 | 204 | 391 | 1.25e-13 | 70.1 |
| MS.gene28267.t1 | MTR_3g082650 | 25.000 | 184 | 121 | 3 | 55 | 235 | 13 | 182 | 8.65e-15 | 72.8 |
| MS.gene28267.t1 | MTR_3g109090 | 28.649 | 185 | 110 | 3 | 55 | 235 | 39 | 205 | 1.37e-14 | 72.8 |
| MS.gene28267.t1 | MTR_3g109090 | 25.258 | 194 | 118 | 3 | 62 | 232 | 131 | 320 | 4.31e-12 | 65.5 |
| MS.gene28267.t1 | MTR_3g109090 | 28.649 | 185 | 110 | 3 | 55 | 235 | 55 | 221 | 1.52e-14 | 72.4 |
| MS.gene28267.t1 | MTR_3g109090 | 25.258 | 194 | 118 | 3 | 62 | 232 | 147 | 336 | 4.63e-12 | 65.1 |
| MS.gene28267.t1 | MTR_6g004810 | 25.258 | 194 | 120 | 4 | 49 | 235 | 34 | 209 | 2.00e-14 | 72.0 |
| MS.gene28267.t1 | MTR_1g061870 | 30.303 | 198 | 124 | 6 | 45 | 235 | 178 | 368 | 2.88e-14 | 72.0 |
| MS.gene28267.t1 | MTR_1g061870 | 26.455 | 189 | 127 | 2 | 46 | 234 | 1 | 177 | 1.39e-13 | 69.7 |
| MS.gene28267.t1 | MTR_3g065190 | 27.586 | 174 | 113 | 2 | 63 | 235 | 28 | 189 | 6.66e-14 | 70.5 |
| MS.gene28267.t1 | MTR_1g019150 | 28.986 | 207 | 136 | 6 | 34 | 232 | 184 | 387 | 1.32e-13 | 70.1 |
| MS.gene28267.t1 | MTR_1g019150 | 24.561 | 171 | 117 | 2 | 62 | 232 | 34 | 192 | 6.08e-12 | 65.1 |
| MS.gene28267.t1 | MTR_3g099590 | 25.455 | 220 | 148 | 6 | 22 | 232 | 44 | 256 | 2.16e-13 | 68.2 |
| MS.gene28267.t1 | MTR_5g030020 | 31.429 | 175 | 113 | 5 | 60 | 232 | 96 | 265 | 5.74e-13 | 67.4 |
| MS.gene28267.t1 | MTR_1g097440 | 30.102 | 196 | 112 | 5 | 45 | 225 | 193 | 378 | 8.79e-13 | 67.4 |
| MS.gene28267.t1 | MTR_1g097440 | 23.810 | 210 | 132 | 3 | 23 | 232 | 9 | 190 | 9.32e-11 | 61.6 |
| MS.gene28267.t1 | MTR_7g102730 | 30.556 | 180 | 116 | 4 | 62 | 235 | 191 | 367 | 1.38e-12 | 67.0 |
| MS.gene28267.t1 | MTR_7g102730 | 27.746 | 173 | 113 | 3 | 62 | 234 | 12 | 172 | 1.04e-11 | 64.3 |
| MS.gene28267.t1 | MTR_7g102730 | 26.695 | 236 | 136 | 9 | 9 | 235 | 57 | 264 | 6.79e-11 | 62.0 |
| MS.gene28267.t1 | MTR_7g118230 | 30.137 | 146 | 94 | 2 | 26 | 166 | 4 | 146 | 3.43e-12 | 65.5 |
| MS.gene28267.t1 | MTR_3g102040 | 24.561 | 171 | 117 | 2 | 62 | 232 | 26 | 184 | 7.95e-12 | 64.7 |
| MS.gene28267.t1 | MTR_3g102040 | 32.240 | 183 | 109 | 7 | 62 | 235 | 205 | 381 | 2.14e-11 | 63.5 |
| MS.gene28267.t1 | MTR_2g097960 | 24.719 | 178 | 127 | 2 | 59 | 235 | 14 | 185 | 1.20e-11 | 63.9 |
| MS.gene28267.t1 | MTR_6g040190 | 25.581 | 172 | 114 | 4 | 62 | 232 | 27 | 185 | 3.79e-11 | 62.8 |
| MS.gene28267.t1 | MTR_5g017280 | 26.554 | 177 | 115 | 4 | 60 | 235 | 4 | 166 | 3.81e-11 | 62.4 |
| MS.gene28267.t1 | MTR_5g017280 | 26.554 | 177 | 115 | 4 | 60 | 235 | 4 | 166 | 5.51e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28267.t1 | AT3G52150 | 68.812 | 202 | 57 | 4 | 40 | 235 | 52 | 253 | 1.03e-92 | 273 |
| MS.gene28267.t1 | AT3G52150 | 68.812 | 202 | 57 | 4 | 40 | 235 | 52 | 253 | 1.03e-92 | 273 |
| MS.gene28267.t1 | AT3G52380 | 41.885 | 191 | 103 | 2 | 51 | 235 | 107 | 295 | 3.33e-45 | 154 |
| MS.gene28267.t1 | AT1G60000 | 36.992 | 246 | 130 | 4 | 7 | 235 | 16 | 253 | 2.09e-39 | 137 |
| MS.gene28267.t1 | AT2G37220 | 36.548 | 197 | 95 | 2 | 61 | 235 | 92 | 280 | 8.57e-35 | 125 |
| MS.gene28267.t1 | AT5G50250 | 38.122 | 181 | 107 | 2 | 55 | 235 | 108 | 283 | 1.74e-34 | 125 |
| MS.gene28267.t1 | AT5G50250 | 40.741 | 81 | 48 | 0 | 58 | 138 | 205 | 285 | 1.15e-13 | 69.3 |
| MS.gene28267.t1 | AT4G24770 | 38.830 | 188 | 109 | 3 | 49 | 235 | 138 | 320 | 3.04e-31 | 117 |
| MS.gene28267.t1 | AT4G24770 | 46.341 | 82 | 43 | 1 | 57 | 138 | 242 | 322 | 3.67e-17 | 79.3 |
| MS.gene28267.t1 | AT4G24770 | 38.830 | 188 | 109 | 3 | 49 | 235 | 138 | 320 | 3.04e-31 | 117 |
| MS.gene28267.t1 | AT4G24770 | 46.341 | 82 | 43 | 1 | 57 | 138 | 242 | 322 | 3.67e-17 | 79.3 |
| MS.gene28267.t1 | AT1G01080 | 33.505 | 194 | 123 | 3 | 47 | 235 | 95 | 287 | 9.10e-23 | 94.4 |
| MS.gene28267.t1 | AT2G35410 | 33.871 | 186 | 112 | 4 | 51 | 230 | 86 | 266 | 1.81e-22 | 93.6 |
| MS.gene28267.t1 | AT1G01080 | 33.333 | 195 | 123 | 4 | 47 | 235 | 95 | 288 | 1.74e-21 | 90.9 |
| MS.gene28267.t1 | AT1G01080 | 33.333 | 183 | 116 | 3 | 47 | 224 | 95 | 276 | 1.92e-20 | 87.8 |
| MS.gene28267.t1 | AT1G22760 | 33.846 | 195 | 115 | 6 | 41 | 225 | 207 | 397 | 2.61e-18 | 84.0 |
| MS.gene28267.t1 | AT1G71770 | 33.333 | 195 | 116 | 6 | 41 | 225 | 217 | 407 | 3.58e-17 | 80.5 |
| MS.gene28267.t1 | AT1G71770 | 28.070 | 171 | 110 | 3 | 62 | 232 | 61 | 218 | 4.20e-12 | 65.5 |
| MS.gene28267.t1 | AT1G71770 | 33.333 | 195 | 116 | 6 | 41 | 225 | 217 | 407 | 3.58e-17 | 80.5 |
| MS.gene28267.t1 | AT1G71770 | 28.070 | 171 | 110 | 3 | 62 | 232 | 61 | 218 | 4.20e-12 | 65.5 |
| MS.gene28267.t1 | AT3G13224 | 29.189 | 185 | 108 | 6 | 58 | 235 | 8 | 176 | 4.90e-17 | 79.3 |
| MS.gene28267.t1 | AT3G14100 | 32.044 | 181 | 109 | 4 | 55 | 235 | 54 | 220 | 1.05e-16 | 79.0 |
| MS.gene28267.t1 | AT3G14100 | 28.022 | 182 | 105 | 3 | 62 | 221 | 146 | 323 | 6.74e-14 | 70.5 |
| MS.gene28267.t1 | AT3G16380 | 31.280 | 211 | 132 | 5 | 33 | 235 | 174 | 379 | 1.41e-16 | 78.6 |
| MS.gene28267.t1 | AT3G16380 | 29.213 | 178 | 108 | 5 | 62 | 235 | 114 | 277 | 3.30e-12 | 65.9 |
| MS.gene28267.t1 | AT3G13224 | 29.885 | 174 | 99 | 6 | 55 | 221 | 14 | 171 | 3.95e-16 | 75.1 |
| MS.gene28267.t1 | AT3G13224 | 28.723 | 188 | 111 | 6 | 55 | 235 | 14 | 185 | 1.08e-15 | 75.5 |
| MS.gene28267.t1 | AT1G49760 | 28.736 | 174 | 108 | 3 | 62 | 233 | 47 | 206 | 2.47e-15 | 75.1 |
| MS.gene28267.t1 | AT1G49760 | 31.361 | 169 | 109 | 3 | 62 | 225 | 226 | 392 | 3.82e-13 | 68.6 |
| MS.gene28267.t1 | AT1G49760 | 28.191 | 188 | 121 | 5 | 53 | 235 | 121 | 299 | 9.81e-12 | 64.7 |
| MS.gene28267.t1 | AT1G49760 | 28.736 | 174 | 108 | 3 | 62 | 233 | 47 | 206 | 2.47e-15 | 75.1 |
| MS.gene28267.t1 | AT1G49760 | 31.361 | 169 | 109 | 3 | 62 | 225 | 226 | 392 | 3.82e-13 | 68.6 |
| MS.gene28267.t1 | AT1G49760 | 28.191 | 188 | 121 | 5 | 53 | 235 | 121 | 299 | 9.81e-12 | 64.7 |
| MS.gene28267.t1 | AT1G54080 | 30.387 | 181 | 112 | 4 | 55 | 235 | 58 | 224 | 2.68e-15 | 74.7 |
| MS.gene28267.t1 | AT1G54080 | 27.320 | 194 | 114 | 4 | 62 | 232 | 150 | 339 | 1.05e-12 | 67.0 |
| MS.gene28267.t1 | AT2G36660 | 30.114 | 176 | 116 | 3 | 62 | 232 | 203 | 376 | 6.88e-15 | 73.9 |
| MS.gene28267.t1 | AT2G36660 | 28.652 | 178 | 115 | 3 | 57 | 234 | 21 | 186 | 9.21e-13 | 67.4 |
| MS.gene28267.t1 | AT4G09040 | 26.263 | 198 | 132 | 5 | 42 | 235 | 19 | 206 | 1.00e-14 | 71.6 |
| MS.gene28267.t1 | AT4G09040 | 24.889 | 225 | 144 | 6 | 29 | 235 | 49 | 266 | 1.15e-14 | 72.0 |
| MS.gene28267.t1 | AT1G17370 | 30.387 | 181 | 112 | 4 | 55 | 235 | 49 | 215 | 1.26e-14 | 72.8 |
| MS.gene28267.t1 | AT1G17370 | 26.562 | 192 | 117 | 4 | 62 | 233 | 141 | 328 | 1.15e-13 | 70.1 |
| MS.gene28267.t1 | AT1G17370 | 30.387 | 181 | 112 | 4 | 55 | 235 | 49 | 215 | 1.33e-14 | 72.8 |
| MS.gene28267.t1 | AT1G17370 | 26.154 | 195 | 117 | 4 | 62 | 233 | 141 | 331 | 4.80e-14 | 71.2 |
| MS.gene28267.t1 | AT2G23350 | 32.768 | 177 | 110 | 4 | 62 | 232 | 227 | 400 | 1.87e-14 | 72.4 |
| MS.gene28267.t1 | AT2G23350 | 32.402 | 179 | 110 | 5 | 58 | 235 | 132 | 300 | 7.69e-13 | 67.8 |
| MS.gene28267.t1 | AT1G54080 | 30.270 | 185 | 111 | 5 | 55 | 235 | 58 | 228 | 3.30e-14 | 71.6 |
| MS.gene28267.t1 | AT1G54080 | 29.341 | 167 | 91 | 4 | 89 | 232 | 181 | 343 | 2.17e-11 | 63.2 |
| MS.gene28267.t1 | AT4G34110 | 32.768 | 177 | 110 | 5 | 62 | 232 | 217 | 390 | 5.75e-14 | 71.2 |
| MS.gene28267.t1 | AT4G34110 | 30.270 | 185 | 113 | 6 | 57 | 235 | 116 | 290 | 3.78e-13 | 68.6 |
| MS.gene28267.t1 | AT4G34110 | 25.581 | 172 | 116 | 2 | 62 | 233 | 38 | 197 | 1.62e-12 | 67.0 |
| MS.gene28267.t1 | AT2G18510 | 27.429 | 175 | 114 | 2 | 62 | 235 | 27 | 189 | 3.28e-13 | 68.6 |
| MS.gene28267.t1 | AT1G34140 | 32.222 | 180 | 114 | 5 | 62 | 235 | 121 | 298 | 5.19e-13 | 68.2 |
| MS.gene28267.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 160 | 235 | 258 | 333 | 5.60e-13 | 67.8 |
| MS.gene28267.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 61 | 139 | 100 | 178 | 2.44e-12 | 65.9 |
| MS.gene28267.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 61 | 137 | 258 | 334 | 1.38e-11 | 63.5 |
| MS.gene28267.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 160 | 235 | 258 | 333 | 5.60e-13 | 67.8 |
| MS.gene28267.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 61 | 139 | 100 | 178 | 2.44e-12 | 65.9 |
| MS.gene28267.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 61 | 137 | 258 | 334 | 1.38e-11 | 63.5 |
| MS.gene28267.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 160 | 235 | 258 | 333 | 5.60e-13 | 67.8 |
| MS.gene28267.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 61 | 139 | 100 | 178 | 2.44e-12 | 65.9 |
| MS.gene28267.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 61 | 137 | 258 | 334 | 1.38e-11 | 63.5 |
| MS.gene28267.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 160 | 235 | 279 | 354 | 5.60e-13 | 67.8 |
| MS.gene28267.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 61 | 137 | 279 | 355 | 1.59e-11 | 63.5 |
| MS.gene28267.t1 | AT4G13860 | 43.836 | 73 | 41 | 0 | 160 | 232 | 4 | 76 | 1.01e-12 | 62.4 |
| MS.gene28267.t1 | AT4G13860 | 37.333 | 75 | 47 | 0 | 61 | 135 | 4 | 78 | 2.94e-11 | 58.5 |
| MS.gene28267.t1 | AT5G40490 | 25.275 | 182 | 111 | 4 | 61 | 235 | 43 | 206 | 1.49e-12 | 66.6 |
| MS.gene28267.t1 | AT5G19350 | 23.034 | 178 | 129 | 2 | 59 | 235 | 23 | 193 | 8.30e-11 | 61.6 |
| MS.gene28267.t1 | AT5G19350 | 23.034 | 178 | 129 | 2 | 59 | 235 | 23 | 193 | 9.15e-11 | 61.2 |
Find 47 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAAACCTCCTGTTGTTAA+AGG | 0.202407 | 3.3:+19153038 | None:intergenic |
| GTGAGTTAGAGAAAGGAAAT+TGG | 0.272472 | 3.3:+19157117 | None:intergenic |
| AGAAGGTGTTGTTGTCGTTT+TGG | 0.315186 | 3.3:+19157066 | None:intergenic |
| TTTATCTCATGACAGCAAAT+TGG | 0.319543 | 3.3:-19153095 | MS.gene28267:intron |
| TGTTAACTGCAGTTGTTAGA+AGG | 0.327875 | 3.3:-19151932 | MS.gene28267:intron |
| TGTATGACAAATACTCTAAA+AGG | 0.332650 | 3.3:-19153288 | MS.gene28267:CDS |
| GCCAAGGTTTCACGGGTTCC+TGG | 0.336172 | 3.3:-19152891 | MS.gene28267:CDS |
| ACCTCAAAATCCAGTGGTTT+CGG | 0.344689 | 3.3:-19152867 | MS.gene28267:CDS |
| TGAGTTAGAGAAAGGAAATT+GGG | 0.352273 | 3.3:+19157118 | None:intergenic |
| GCAGAAAATCCGAGTGAATA+AGG | 0.353968 | 3.3:-19151909 | MS.gene28267:CDS |
| CAAGGTATATGTGGGAAATC+TGG | 0.373394 | 3.3:-19152976 | MS.gene28267:CDS |
| TTTCCCACATATACCTTGTA+AGG | 0.379798 | 3.3:+19152981 | None:intergenic |
| ACCATGTTCTTGAACAATCT+TGG | 0.384608 | 3.3:+19156910 | None:intergenic |
| GCGGATTCCTCGGCCTGGAC+TGG | 0.418312 | 3.3:+19153017 | None:intergenic |
| CTCTTAGTGCCAAGGTTTCA+CGG | 0.433896 | 3.3:-19152899 | MS.gene28267:CDS |
| CCAAGGTTTCACGGGTTCCT+GGG | 0.476496 | 3.3:-19152890 | MS.gene28267:CDS |
| CAGTCCTTACAAGGTATATG+TGG | 0.476562 | 3.3:-19152985 | MS.gene28267:CDS |
| GTCTACAAATGCGGATTCCT+CGG | 0.478263 | 3.3:+19153007 | None:intergenic |
| AACAGGAGGTTTGCCAGTCC+AGG | 0.484987 | 3.3:-19153030 | MS.gene28267:CDS |
| ATTTGTAGACAGTCCTTACA+AGG | 0.497965 | 3.3:-19152994 | MS.gene28267:CDS |
| CCCAGGAACCCGTGAAACCT+TGG | 0.513301 | 3.3:+19152890 | None:intergenic |
| ATCTCATGACAGCAAATTGG+AGG | 0.517324 | 3.3:-19153092 | MS.gene28267:intron |
| GTCGTAACGACAAGGGAAGA+AGG | 0.535775 | 3.3:+19157049 | None:intergenic |
| AAGTGTTGTGAGTTAGAGAA+AGG | 0.537007 | 3.3:+19157110 | None:intergenic |
| AGTAACAAAGCCGAAACCAC+TGG | 0.538663 | 3.3:+19152857 | None:intergenic |
| TCTTAGTGCCAAGGTTTCAC+GGG | 0.544466 | 3.3:-19152898 | MS.gene28267:CDS |
| AGCAAATGCTCTTAGTGCCA+AGG | 0.546104 | 3.3:-19152907 | MS.gene28267:CDS |
| TGCTGCGTTTGCATCCTCAA+CGG | 0.548877 | 3.3:+19153234 | None:intergenic |
| GCCAAGATTGTTCAAGAACA+TGG | 0.550336 | 3.3:-19156911 | MS.gene28267:CDS |
| GTTAACTGCAGTTGTTAGAA+GGG | 0.555240 | 3.3:-19151931 | MS.gene28267:intron |
| CAAATGCGGATTCCTCGGCC+TGG | 0.555822 | 3.3:+19153012 | None:intergenic |
| ACGTAAAGCTTTCTAACAGC+AGG | 0.562554 | 3.3:+19156971 | None:intergenic |
| TGTTTCTTCTGAACAAGCCA+CGG | 0.601130 | 3.3:-19157002 | MS.gene28267:CDS |
| GCAGCAGCTGAGAAACTCAA+TGG | 0.608545 | 3.3:-19153217 | MS.gene28267:CDS |
| TGTTACAATGAAAACCGTTG+AGG | 0.611936 | 3.3:-19153248 | MS.gene28267:CDS |
| AGGTTTGCCAGTCCAGGCCG+AGG | 0.614335 | 3.3:-19153024 | MS.gene28267:CDS |
| GCTGTTAGAAAGCTTTACGT+TGG | 0.619231 | 3.3:-19156968 | MS.gene28267:CDS |
| GAGTTAGAGAAAGGAAATTG+GGG | 0.630783 | 3.3:+19157119 | None:intergenic |
| TCTCATGACAGCAAATTGGA+GGG | 0.637188 | 3.3:-19153091 | MS.gene28267:intron |
| AACGACGTGTCGTAACGACA+AGG | 0.638429 | 3.3:+19157041 | None:intergenic |
| CCTGGGACCTCAAAATCCAG+TGG | 0.638570 | 3.3:-19152873 | MS.gene28267:CDS |
| AGTCCTTACAAGGTATATGT+GGG | 0.639932 | 3.3:-19152984 | MS.gene28267:CDS |
| ACGACGTGTCGTAACGACAA+GGG | 0.641069 | 3.3:+19157042 | None:intergenic |
| GTAAGGACTGTCTACAAATG+CGG | 0.643041 | 3.3:+19152998 | None:intergenic |
| TTCTTCTGAACAAGCCACGG+TGG | 0.672547 | 3.3:-19156999 | MS.gene28267:CDS |
| TCATCATTACTAACAGTACG+AGG | 0.729772 | 3.3:+19156938 | None:intergenic |
| AACAGCAGGAGAATCCACCG+TGG | 0.836989 | 3.3:+19156985 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATGTTGAAAAATAAAA+AGG | + | chr3.3:19156555-19156574 | None:intergenic | 10.0% |
| !! | TACAAATTAAAAATGATAAA+AGG | + | chr3.3:19154675-19154694 | None:intergenic | 10.0% |
| !! | TATATGTTGAAAAATAAAAA+GGG | + | chr3.3:19156554-19156573 | None:intergenic | 10.0% |
| !!! | AAAAACAAAAAAAACTTTTA+AGG | - | chr3.3:19153026-19153045 | MS.gene28267:CDS | 10.0% |
| !!! | TTTAAAAATGATTTTTGTTT+TGG | + | chr3.3:19153355-19153374 | None:intergenic | 10.0% |
| !! | AATACAAAAGAAAATCATAT+GGG | + | chr3.3:19154495-19154514 | None:intergenic | 15.0% |
| !! | AATGTAGTATAATAGATTTA+AGG | - | chr3.3:19153568-19153587 | MS.gene28267:intron | 15.0% |
| !! | ACTAAAAATTAAGATACATA+TGG | + | chr3.3:19153906-19153925 | None:intergenic | 15.0% |
| !! | GGTTACATTAATATTAAAAT+AGG | - | chr3.3:19155114-19155133 | MS.gene28267:intron | 15.0% |
| !!! | ATAATAGATTTAAGGTAAAA+TGG | - | chr3.3:19153576-19153595 | MS.gene28267:intron | 15.0% |
| !!! | ATGAATTTTACTCATTTATA+AGG | - | chr3.3:19155500-19155519 | MS.gene28267:intron | 15.0% |
| !!! | ATTAACAATTTTCAATTTCA+GGG | + | chr3.3:19156618-19156637 | None:intergenic | 15.0% |
| !!! | TAAAGAAGTATATTTCAAAA+TGG | - | chr3.3:19154521-19154540 | MS.gene28267:intron | 15.0% |
| !!! | TTTTAACTATTGTAATTTGT+AGG | - | chr3.3:19154100-19154119 | MS.gene28267:intron | 15.0% |
| !!! | TTTTAATAATCTGTAACAAA+CGG | + | chr3.3:19153252-19153271 | None:intergenic | 15.0% |
| !!! | TTTTATTATGATTGATTCAT+AGG | - | chr3.3:19155729-19155748 | MS.gene28267:intron | 15.0% |
| !!! | TTTTGATATTAATAGAAGTT+GGG | + | chr3.3:19154267-19154286 | None:intergenic | 15.0% |
| !!! | TTTTTTTGAACAAATCAAAA+TGG | + | chr3.3:19153010-19153029 | None:intergenic | 15.0% |
| !! | AAAACAAAACAAATCAAAGA+AGG | - | chr3.3:19154293-19154312 | MS.gene28267:intron | 20.0% |
| !! | AAATGAAACCAAATAGATAA+AGG | + | chr3.3:19153941-19153960 | None:intergenic | 20.0% |
| !! | AGAATATGTTGTAAAAAACA+AGG | - | chr3.3:19153538-19153557 | MS.gene28267:intron | 20.0% |
| !! | ATCAATCCTACATATATTAA+TGG | - | chr3.3:19156671-19156690 | MS.gene28267:intron | 20.0% |
| !! | ATGAAAAATATCAAAACTTG+AGG | + | chr3.3:19156922-19156941 | None:intergenic | 20.0% |
| !! | CAATACAAAAGAAAATCATA+TGG | + | chr3.3:19154496-19154515 | None:intergenic | 20.0% |
| !! | GAAATCAAAATTCTGTTAAA+GGG | + | chr3.3:19155350-19155369 | None:intergenic | 20.0% |
| !! | GAAATTGAAAATTGTTAATC+TGG | - | chr3.3:19156619-19156638 | MS.gene28267:intron | 20.0% |
| !! | GAATTGAAGTTTGTAAAATT+AGG | - | chr3.3:19152658-19152677 | MS.gene28267:intron | 20.0% |
| !! | TAAATGAGTAAAATTCATTG+AGG | + | chr3.3:19155498-19155517 | None:intergenic | 20.0% |
| !! | TAATGTTCATTCAACAATTT+AGG | - | chr3.3:19155896-19155915 | MS.gene28267:intron | 20.0% |
| !! | TAATTTCATTTAACAAGAGA+AGG | - | chr3.3:19153846-19153865 | MS.gene28267:intron | 20.0% |
| !! | TACAATTTCTATCATGATTT+GGG | - | chr3.3:19156987-19157006 | MS.gene28267:CDS | 20.0% |
| !! | TGAAATCAAAATTCTGTTAA+AGG | + | chr3.3:19155351-19155370 | None:intergenic | 20.0% |
| !! | TTACAATTTCTATCATGATT+TGG | - | chr3.3:19156986-19157005 | MS.gene28267:CDS | 20.0% |
| !!! | AAATTCATTTTGGTTGAAAT+GGG | - | chr3.3:19152261-19152280 | MS.gene28267:intron | 20.0% |
| !!! | AACAGAATTTTGATTTCATA+AGG | - | chr3.3:19155353-19155372 | MS.gene28267:intron | 20.0% |
| !!! | ATGAAGAAATGTATGATTTT+AGG | - | chr3.3:19153224-19153243 | MS.gene28267:CDS | 20.0% |
| !!! | CATTTTTAATTTGTAGAAGT+TGG | - | chr3.3:19154680-19154699 | MS.gene28267:intron | 20.0% |
| !!! | CTTCATTTTGAAAAATTAAC+TGG | - | chr3.3:19152691-19152710 | MS.gene28267:intron | 20.0% |
| !!! | GAAAAATAAAAAGGGTATTT+CGG | + | chr3.3:19156546-19156565 | None:intergenic | 20.0% |
| !!! | GATTAACAATTTTCAATTTC+AGG | + | chr3.3:19156619-19156638 | None:intergenic | 20.0% |
| !!! | GATTTTCTGTTTTAAGTTTA+TGG | - | chr3.3:19154842-19154861 | MS.gene28267:intron | 20.0% |
| !!! | GTTTTGATATTAATAGAAGT+TGG | + | chr3.3:19154268-19154287 | None:intergenic | 20.0% |
| !!! | TGAAGAAATGTATGATTTTA+GGG | - | chr3.3:19153225-19153244 | MS.gene28267:CDS | 20.0% |
| !!! | TGATTTTGTGAAATTCATTT+TGG | - | chr3.3:19152251-19152270 | MS.gene28267:intron | 20.0% |
| ! | AAAACATACAAAGAAAGTTG+AGG | + | chr3.3:19155661-19155680 | None:intergenic | 25.0% |
| ! | AAAGAAAATCATATGGGTTT+AGG | + | chr3.3:19154489-19154508 | None:intergenic | 25.0% |
| ! | AAGAAAATCATATGGGTTTA+GGG | + | chr3.3:19154488-19154507 | None:intergenic | 25.0% |
| ! | AATCCTACATATATTAATGG+AGG | - | chr3.3:19156674-19156693 | MS.gene28267:intron | 25.0% |
| ! | ACAATTTCTATCATGATTTG+GGG | - | chr3.3:19156988-19157007 | MS.gene28267:CDS | 25.0% |
| ! | ACAATTTGAGGAACTAAATT+AGG | - | chr3.3:19156778-19156797 | MS.gene28267:intron | 25.0% |
| ! | AGATGAAAAACAATCTACAA+AGG | - | chr3.3:19156446-19156465 | MS.gene28267:intron | 25.0% |
| ! | AGGATTTATCATATAACCTA+AGG | - | chr3.3:19155585-19155604 | MS.gene28267:intron | 25.0% |
| ! | ATCATACATTTCTTCATAAG+AGG | + | chr3.3:19153221-19153240 | None:intergenic | 25.0% |
| ! | ATCCTACATATATTAATGGA+GGG | - | chr3.3:19156675-19156694 | MS.gene28267:intron | 25.0% |
| ! | ATGTTAACATATTTGGAGAT+GGG | + | chr3.3:19156963-19156982 | None:intergenic | 25.0% |
| ! | ATTGAAAAGCAACATAGAAA+TGG | - | chr3.3:19154733-19154752 | MS.gene28267:intron | 25.0% |
| ! | CACTAAACATAATTTAGCTA+TGG | - | chr3.3:19153719-19153738 | MS.gene28267:intron | 25.0% |
| ! | GAAGAATGAAAAAGTAATAG+CGG | - | chr3.3:19153626-19153645 | MS.gene28267:intron | 25.0% |
| ! | GATGAAAAACAATCTACAAA+GGG | - | chr3.3:19156447-19156466 | MS.gene28267:intron | 25.0% |
| ! | GATTTGATAAGAAATCCAAA+CGG | + | chr3.3:19156654-19156673 | None:intergenic | 25.0% |
| ! | GGTAAATGAAACATTTCATA+CGG | - | chr3.3:19153597-19153616 | MS.gene28267:intron | 25.0% |
| ! | GTAAGTCATGTTAACATATT+TGG | + | chr3.3:19156970-19156989 | None:intergenic | 25.0% |
| ! | GTTATATGATAAATCCTACA+TGG | + | chr3.3:19155582-19155601 | None:intergenic | 25.0% |
| ! | GTTTAACTCCTTTATCTATT+TGG | - | chr3.3:19153930-19153949 | MS.gene28267:intron | 25.0% |
| ! | TAGGAGAATTTAGATTTCAA+TGG | - | chr3.3:19155133-19155152 | MS.gene28267:intron | 25.0% |
| ! | TGTATGACAAATACTCTAAA+AGG | - | chr3.3:19155755-19155774 | MS.gene28267:intron | 25.0% |
| ! | TTATTAGCTGAAACTCATAT+GGG | + | chr3.3:19153124-19153143 | None:intergenic | 25.0% |
| ! | TTCAGTATAATTACATGTGT+TGG | - | chr3.3:19152503-19152522 | MS.gene28267:intron | 25.0% |
| ! | TTGAAAAGCAACATAGAAAT+GGG | - | chr3.3:19154734-19154753 | MS.gene28267:intron | 25.0% |
| !! | AATTTAGTTCCTCAAATTGT+AGG | + | chr3.3:19156778-19156797 | None:intergenic | 25.0% |
| !! | AGAAGTATATTTCAAAATGG+CGG | - | chr3.3:19154524-19154543 | MS.gene28267:intron | 25.0% |
| !! | AGTTTAGAATATTGATCATG+TGG | - | chr3.3:19156733-19156752 | MS.gene28267:intron | 25.0% |
| !! | CAACAATTTAGGTTTCTTAA+AGG | - | chr3.3:19155907-19155926 | MS.gene28267:intron | 25.0% |
| !! | CACCTTAATTTGGTTAAAAT+GGG | - | chr3.3:19152857-19152876 | MS.gene28267:CDS | 25.0% |
| !! | CTTAACATTCACTCTTTTAT+TGG | + | chr3.3:19153166-19153185 | None:intergenic | 25.0% |
| !! | GAAATGTAGAATTTAGTTCA+TGG | - | chr3.3:19155442-19155461 | MS.gene28267:intron | 25.0% |
| !! | TAATTTGGTTAAAATGGGTT+TGG | - | chr3.3:19152862-19152881 | MS.gene28267:CDS | 25.0% |
| !! | TAGCCTTAAAAATTTCTTCT+CGG | - | chr3.3:19156109-19156128 | MS.gene28267:intron | 25.0% |
| !! | TCACCTTAATTTGGTTAAAA+TGG | - | chr3.3:19152856-19152875 | MS.gene28267:CDS | 25.0% |
| !! | TTAAGGTACCTAGTTAAAAT+GGG | - | chr3.3:19153043-19153062 | MS.gene28267:CDS | 25.0% |
| !! | TTATGTGTTATTAGTTGTGT+CGG | + | chr3.3:19152483-19152502 | None:intergenic | 25.0% |
| !! | TTTAAGGTACCTAGTTAAAA+TGG | - | chr3.3:19153042-19153061 | MS.gene28267:CDS | 25.0% |
| !! | TTTCCGAGAAGAAATTTTTA+AGG | + | chr3.3:19156115-19156134 | None:intergenic | 25.0% |
| !!! | AACCCATTTTAACCAAATTA+AGG | + | chr3.3:19152862-19152881 | None:intergenic | 25.0% |
| !!! | AATGGGATAATGTTTTTAGT+TGG | - | chr3.3:19154751-19154770 | MS.gene28267:intron | 25.0% |
| !!! | GAAATTCATTTTGGTTGAAA+TGG | - | chr3.3:19152260-19152279 | MS.gene28267:intron | 25.0% |
| !!! | TGTTTGTTTTAGAAGGATTT+GGG | - | chr3.3:19154556-19154575 | MS.gene28267:intron | 25.0% |
| !!! | TTGTTTGTTTTAGAAGGATT+TGG | - | chr3.3:19154555-19154574 | MS.gene28267:intron | 25.0% |
| !!! | TTTCAGTTGTTTGTTTTAGA+AGG | - | chr3.3:19154549-19154568 | MS.gene28267:intron | 25.0% |
| AAGCTATTCTTGATAGACTA+AGG | + | chr3.3:19155412-19155431 | None:intergenic | 30.0% | |
| AAGGATTAATGTAGTAGTGA+TGG | - | chr3.3:19155372-19155391 | MS.gene28267:intron | 30.0% | |
| AATTTAGATTTCAATGGTGG+TGG | - | chr3.3:19155139-19155158 | MS.gene28267:intron | 30.0% | |
| ACATCAACAAAGAGACAAAA+AGG | + | chr3.3:19156885-19156904 | None:intergenic | 30.0% | |
| AGTTAACATACAGCAAATCA+AGG | + | chr3.3:19157099-19157118 | None:intergenic | 30.0% | |
| ATATTAATGTAACCTTTGCC+AGG | + | chr3.3:19155108-19155127 | None:intergenic | 30.0% | |
| ATCCCTCCATTAATATATGT+AGG | + | chr3.3:19156680-19156699 | None:intergenic | 30.0% | |
| ATGTACGTTTGAAGAAAACT+TGG | - | chr3.3:19153672-19153691 | MS.gene28267:intron | 30.0% | |
| CATCAACAAAGAGACAAAAA+GGG | + | chr3.3:19156884-19156903 | None:intergenic | 30.0% | |
| CATGTTAACATATTTGGAGA+TGG | + | chr3.3:19156964-19156983 | None:intergenic | 30.0% | |
| CCTTTAGCAAAAAAAGTTGA+GGG | + | chr3.3:19154169-19154188 | None:intergenic | 30.0% | |
| CTTATTAGCTGAAACTCATA+TGG | + | chr3.3:19153125-19153144 | None:intergenic | 30.0% | |
| GAGAATTTAGATTTCAATGG+TGG | - | chr3.3:19155136-19155155 | MS.gene28267:intron | 30.0% | |
| GGAACACATTTCTTAATTGT+GGG | + | chr3.3:19153085-19153104 | None:intergenic | 30.0% | |
| GTCTATCAAGAATAGCTTAA+AGG | - | chr3.3:19155414-19155433 | MS.gene28267:intron | 30.0% | |
| TATTAATGTAACCTTTGCCA+GGG | + | chr3.3:19155107-19155126 | None:intergenic | 30.0% | |
| TATTCTTGATAGACTAAGGT+AGG | + | chr3.3:19155408-19155427 | None:intergenic | 30.0% | |
| TCAAAAAAACACAAGTCGTT+GGG | - | chr3.3:19153321-19153340 | MS.gene28267:intron | 30.0% | |
| TGAGTTAGAGAAAGGAAATT+GGG | + | chr3.3:19151928-19151947 | None:intergenic | 30.0% | |
| TGATATAGTCCTACAATTTG+AGG | - | chr3.3:19156766-19156785 | MS.gene28267:intron | 30.0% | |
| TGGAACACATTTCTTAATTG+TGG | + | chr3.3:19153086-19153105 | None:intergenic | 30.0% | |
| TTATATGTCGCAAAACAGAA+CGG | + | chr3.3:19156589-19156608 | None:intergenic | 30.0% | |
| TTCAAAAAAACACAAGTCGT+TGG | - | chr3.3:19153320-19153339 | MS.gene28267:intron | 30.0% | |
| TTGCTTATTTAGTCTGTTTG+AGG | + | chr3.3:19154076-19154095 | None:intergenic | 30.0% | |
| TTTATCTCATGACAGCAAAT+TGG | - | chr3.3:19155948-19155967 | MS.gene28267:intron | 30.0% | |
| TTTCAGCATGCAAAATAAAC+AGG | + | chr3.3:19156283-19156302 | None:intergenic | 30.0% | |
| ! | AAAATGGGTTTGTTCAATGT+GGG | - | chr3.3:19153058-19153077 | MS.gene28267:CDS | 30.0% |
| ! | AAAGGTTCTAGCATCAAAAT+CGG | + | chr3.3:19154657-19154676 | None:intergenic | 30.0% |
| ! | ACTATTGTAATTTGTAGGTG+TGG | - | chr3.3:19154105-19154124 | MS.gene28267:intron | 30.0% |
| ! | ACTGTCTCTTAACTTGAATT+CGG | - | chr3.3:19154417-19154436 | MS.gene28267:intron | 30.0% |
| ! | ATAATGAGAGAAGCTTTTAG+TGG | - | chr3.3:19154211-19154230 | MS.gene28267:intron | 30.0% |
| ! | TAAAATGGGTTTGTTCAATG+TGG | - | chr3.3:19153057-19153076 | MS.gene28267:CDS | 30.0% |
| ! | TAATGAGAGAAGCTTTTAGT+GGG | - | chr3.3:19154212-19154231 | MS.gene28267:intron | 30.0% |
| ! | TCCTGTTGTTAAAGGTTTTT+CGG | + | chr3.3:19156000-19156019 | None:intergenic | 30.0% |
| ! | TCTGATTTTCCCATAGAATT+CGG | + | chr3.3:19154243-19154262 | None:intergenic | 30.0% |
| ! | TTAGCACTGAAGTATTTGAA+TGG | - | chr3.3:19154583-19154602 | MS.gene28267:intron | 30.0% |
| !! | AACAGTAAACTTGTTGTCAT+TGG | - | chr3.3:19155192-19155211 | MS.gene28267:intron | 30.0% |
| !! | ATTTGCTTATTTCTGTTAGG+GGG | - | chr3.3:19154606-19154625 | MS.gene28267:intron | 30.0% |
| !! | GATTTGCTTATTTCTGTTAG+GGG | - | chr3.3:19154605-19154624 | MS.gene28267:intron | 30.0% |
| !! | GGATTTGCTTATTTCTGTTA+GGG | - | chr3.3:19154604-19154623 | MS.gene28267:intron | 30.0% |
| !! | GTAATTTGTTTGACCAATAG+CGG | - | chr3.3:19152343-19152362 | MS.gene28267:intron | 30.0% |
| !! | TGGATTTGCTTATTTCTGTT+AGG | - | chr3.3:19154603-19154622 | MS.gene28267:intron | 30.0% |
| !! | TGGTTTGGTTAATGTACTTA+AGG | - | chr3.3:19153692-19153711 | MS.gene28267:intron | 30.0% |
| !!! | TGAACAAACCCATTTTAACT+AGG | + | chr3.3:19153054-19153073 | None:intergenic | 30.0% |
| !!! | TGTTGTCGTTTTGGATTTTA+AGG | + | chr3.3:19151971-19151990 | None:intergenic | 30.0% |
| AACTGATTGGATGTTGGATT+GGG | - | chr3.3:19152796-19152815 | MS.gene28267:intron | 35.0% | |
| AAGATTGGCAAAATGTTAGC+AGG | - | chr3.3:19156475-19156494 | MS.gene28267:intron | 35.0% | |
| ACCATGTTCTTGAACAATCT+TGG | + | chr3.3:19152136-19152155 | None:intergenic | 35.0% | |
| ACCGAAAAACCTTTAACAAC+AGG | - | chr3.3:19155996-19156015 | MS.gene28267:intron | 35.0% | |
| AGCATGCAAAATAAACAGGA+AGG | + | chr3.3:19156279-19156298 | None:intergenic | 35.0% | |
| AGTCCTTACAAGGTATATGT+GGG | - | chr3.3:19156059-19156078 | MS.gene28267:intron | 35.0% | |
| ATGTACTTCTTACCAAAGCA+AGG | + | chr3.3:19154819-19154838 | None:intergenic | 35.0% | |
| ATTTGGGGACTCTATTCAAT+GGG | - | chr3.3:19157003-19157022 | MS.gene28267:CDS | 35.0% | |
| ATTTGTAGACAGTCCTTACA+AGG | - | chr3.3:19156049-19156068 | MS.gene28267:intron | 35.0% | |
| CACAAATGTGATGTTTATGC+GGG | + | chr3.3:19156836-19156855 | None:intergenic | 35.0% | |
| CCACAAATGTGATGTTTATG+CGG | + | chr3.3:19156837-19156856 | None:intergenic | 35.0% | |
| CCATGTACTTGAAGTATATC+AGG | + | chr3.3:19156309-19156328 | None:intergenic | 35.0% | |
| CCTGATATACTTCAAGTACA+TGG | - | chr3.3:19156306-19156325 | MS.gene28267:intron | 35.0% | |
| CGTTTGAAGAAAACTTGGTT+TGG | - | chr3.3:19153677-19153696 | MS.gene28267:intron | 35.0% | |
| CTATCACCAACAAAACTCTT+GGG | - | chr3.3:19152822-19152841 | MS.gene28267:CDS | 35.0% | |
| CTCTTTGTAAATGATCACAC+AGG | + | chr3.3:19154001-19154020 | None:intergenic | 35.0% | |
| CTGTGTGATCATTTACAAAG+AGG | - | chr3.3:19153999-19154018 | MS.gene28267:intron | 35.0% | |
| GAAAAACCTTTAACAACAGG+AGG | - | chr3.3:19155999-19156018 | MS.gene28267:intron | 35.0% | |
| GAAATGTGTTCCACATAAAG+TGG | - | chr3.3:19153093-19153112 | MS.gene28267:intron | 35.0% | |
| GAGTTAGAGAAAGGAAATTG+GGG | + | chr3.3:19151927-19151946 | None:intergenic | 35.0% | |
| GCATGCAAAATAAACAGGAA+GGG | + | chr3.3:19156278-19156297 | None:intergenic | 35.0% | |
| GCCTTTAGCAAAAAAAGTTG+AGG | + | chr3.3:19154170-19154189 | None:intergenic | 35.0% | |
| GTAAACTGATGACAACTGAT+TGG | - | chr3.3:19152783-19152802 | MS.gene28267:intron | 35.0% | |
| GTCTTGAATTAGAACCTTAC+AGG | - | chr3.3:19154037-19154056 | MS.gene28267:intron | 35.0% | |
| GTGAGTTAGAGAAAGGAAAT+TGG | + | chr3.3:19151929-19151948 | None:intergenic | 35.0% | |
| GTTAACTGCAGTTGTTAGAA+GGG | - | chr3.3:19157112-19157131 | MS.gene28267:CDS | 35.0% | |
| GTTTGGAGAAGTAACTCTAA+CGG | + | chr3.3:19156334-19156353 | None:intergenic | 35.0% | |
| TAAGAGACAGTAAGAGAAAG+AGG | + | chr3.3:19154408-19154427 | None:intergenic | 35.0% | |
| TATAAGGTGAAACTGTTCAG+TGG | - | chr3.3:19155516-19155535 | MS.gene28267:intron | 35.0% | |
| TATATGTCGCAAAACAGAAC+GGG | + | chr3.3:19156588-19156607 | None:intergenic | 35.0% | |
| TCATCATTACTAACAGTACG+AGG | + | chr3.3:19152108-19152127 | None:intergenic | 35.0% | |
| TCTTGTCAACTCATATCCTT+AGG | + | chr3.3:19155604-19155623 | None:intergenic | 35.0% | |
| TGATAAGAAATCCAAACGGA+GGG | + | chr3.3:19156650-19156669 | None:intergenic | 35.0% | |
| TGCTAAAGGCAGAAAGAAAT+GGG | - | chr3.3:19154180-19154199 | MS.gene28267:intron | 35.0% | |
| TGTTAACTGCAGTTGTTAGA+AGG | - | chr3.3:19157111-19157130 | MS.gene28267:CDS | 35.0% | |
| TGTTACAATGAAAACCGTTG+AGG | - | chr3.3:19155795-19155814 | MS.gene28267:intron | 35.0% | |
| TGTTCAGTACATGTCATCAA+TGG | + | chr3.3:19155556-19155575 | None:intergenic | 35.0% | |
| TTCATGATCATCATCAAGCA+AGG | + | chr3.3:19156356-19156375 | None:intergenic | 35.0% | |
| TTGATAAGAAATCCAAACGG+AGG | + | chr3.3:19156651-19156670 | None:intergenic | 35.0% | |
| TTGCTAAAGGCAGAAAGAAA+TGG | - | chr3.3:19154179-19154198 | MS.gene28267:intron | 35.0% | |
| TTTCCCACATATACCTTGTA+AGG | + | chr3.3:19156065-19156084 | None:intergenic | 35.0% | |
| ! | AAGTGTTGTGAGTTAGAGAA+AGG | + | chr3.3:19151936-19151955 | None:intergenic | 35.0% |
| ! | ATGAGAGCAGCTATTTCATT+TGG | + | chr3.3:19156861-19156880 | None:intergenic | 35.0% |
| ! | ATTGTAATTTGTAGGTGTGG+TGG | - | chr3.3:19154108-19154127 | MS.gene28267:intron | 35.0% |
| ! | CTGTCTCTTAACTTGAATTC+GGG | - | chr3.3:19154418-19154437 | MS.gene28267:intron | 35.0% |
| ! | TTATGGCTGTTTATCCCTTT+TGG | - | chr3.3:19154859-19154878 | MS.gene28267:intron | 35.0% |
| ! | TTGAATTCGGGTATTTTCCA+CGG | - | chr3.3:19154430-19154449 | MS.gene28267:intron | 35.0% |
| !! | AAAGCTGAGGTACTTTTTGT+TGG | - | chr3.3:19152165-19152184 | MS.gene28267:intron | 35.0% |
| !! | GTATTATGCTGCTACTTTCA+TGG | - | chr3.3:19154789-19154808 | MS.gene28267:intron | 35.0% |
| !!! | AGTTTTGTTAGATCTCTCGA+GGG | - | chr3.3:19152421-19152440 | MS.gene28267:intron | 35.0% |
| !!! | CCCTCAACTTTTTTTGCTAA+AGG | - | chr3.3:19154166-19154185 | MS.gene28267:intron | 35.0% |
| !!! | TAGTTTTGTTAGATCTCTCG+AGG | - | chr3.3:19152420-19152439 | MS.gene28267:intron | 35.0% |
| AAAAGTAATAGCGGCTTTGC+AGG | - | chr3.3:19153635-19153654 | MS.gene28267:intron | 40.0% | |
| AATTGAAAGATCTCTCACCG+TGG | + | chr3.3:19154450-19154469 | None:intergenic | 40.0% | |
| ACACGACACATATTTGACAC+CGG | - | chr3.3:19152543-19152562 | MS.gene28267:intron | 40.0% | |
| ACAGTAAGAGAAAGAGGAAG+AGG | + | chr3.3:19154402-19154421 | None:intergenic | 40.0% | |
| ACCTCAAAATCCAGTGGTTT+CGG | - | chr3.3:19156176-19156195 | MS.gene28267:intron | 40.0% | |
| ACGTAAAGCTTTCTAACAGC+AGG | + | chr3.3:19152075-19152094 | None:intergenic | 40.0% | |
| AGCAAAAAAAGTTGAGGGAG+AGG | + | chr3.3:19154164-19154183 | None:intergenic | 40.0% | |
| ATCTCATGACAGCAAATTGG+AGG | - | chr3.3:19155951-19155970 | MS.gene28267:intron | 40.0% | |
| ATCTTGTCTTGCAGACCAAA+AGG | + | chr3.3:19154877-19154896 | None:intergenic | 40.0% | |
| ATGGGTTTGACCACTTTATG+TGG | + | chr3.3:19153106-19153125 | None:intergenic | 40.0% | |
| ATTTGTTTGACCAATAGCGG+TGG | - | chr3.3:19152346-19152365 | MS.gene28267:intron | 40.0% | |
| CAACTGATTGGATGTTGGAT+TGG | - | chr3.3:19152795-19152814 | MS.gene28267:intron | 40.0% | |
| CAAGGTATATGTGGGAAATC+TGG | - | chr3.3:19156067-19156086 | MS.gene28267:intron | 40.0% | |
| CAGTCCTTACAAGGTATATG+TGG | - | chr3.3:19156058-19156077 | MS.gene28267:intron | 40.0% | |
| CATAGACTAATCTCTCATGC+TGG | + | chr3.3:19152621-19152640 | None:intergenic | 40.0% | |
| CCATTAATGTGCGATGCAAA+TGG | + | chr3.3:19154975-19154994 | None:intergenic | 40.0% | |
| CCATTTGCATCGCACATTAA+TGG | - | chr3.3:19154972-19154991 | MS.gene28267:intron | 40.0% | |
| CCGCATAAACATCACATTTG+TGG | - | chr3.3:19156834-19156853 | MS.gene28267:intron | 40.0% | |
| CCTATCACCAACAAAACTCT+TGG | - | chr3.3:19152821-19152840 | MS.gene28267:CDS | 40.0% | |
| CTACCATAAACCCTTCTAGT+AGG | + | chr3.3:19156504-19156523 | None:intergenic | 40.0% | |
| CTTGATGCACTCGATATTTG+TGG | + | chr3.3:19155697-19155716 | None:intergenic | 40.0% | |
| GATCATCATCAAGCAAGGTT+TGG | + | chr3.3:19156351-19156370 | None:intergenic | 40.0% | |
| GATGACAACTGATTGGATGT+TGG | - | chr3.3:19152790-19152809 | MS.gene28267:intron | 40.0% | |
| GATTTGGGGACTCTATTCAA+TGG | - | chr3.3:19157002-19157021 | MS.gene28267:CDS | 40.0% | |
| GCAAAAAAAGTTGAGGGAGA+GGG | + | chr3.3:19154163-19154182 | None:intergenic | 40.0% | |
| GCAGAAAATCCGAGTGAATA+AGG | - | chr3.3:19157134-19157153 | MS.gene28267:CDS | 40.0% | |
| GCAGTTTCAAGAACTTGAAC+CGG | + | chr3.3:19155230-19155249 | None:intergenic | 40.0% | |
| GCCAAGATTGTTCAAGAACA+TGG | - | chr3.3:19152132-19152151 | MS.gene28267:intron | 40.0% | |
| GCTGTTAGAAAGCTTTACGT+TGG | - | chr3.3:19152075-19152094 | MS.gene28267:intron | 40.0% | |
| GTAAGGACTGTCTACAAATG+CGG | + | chr3.3:19156048-19156067 | None:intergenic | 40.0% | |
| TCTCATGACAGCAAATTGGA+GGG | - | chr3.3:19155952-19155971 | MS.gene28267:intron | 40.0% | |
| TCTTGTCTTGCAGACCAAAA+GGG | + | chr3.3:19154876-19154895 | None:intergenic | 40.0% | |
| TGGTCTGCAAGACAAGATTA+AGG | - | chr3.3:19154879-19154898 | MS.gene28267:intron | 40.0% | |
| TGTACTGAACAATGCCATGT+AGG | - | chr3.3:19155565-19155584 | MS.gene28267:intron | 40.0% | |
| TGTTGTTCTCATTCTCAGAG+TGG | - | chr3.3:19153811-19153830 | MS.gene28267:intron | 40.0% | |
| TGTTTCTTCTGAACAAGCCA+CGG | - | chr3.3:19152041-19152060 | MS.gene28267:intron | 40.0% | |
| TTTCATGGAGAACCTTGCTT+TGG | - | chr3.3:19154804-19154823 | MS.gene28267:intron | 40.0% | |
| ! | CTTGTTGTCATTGGACTGAA+AGG | - | chr3.3:19155201-19155220 | MS.gene28267:intron | 40.0% |
| ! | GTGGAGTGTTCACCTTAATT+TGG | - | chr3.3:19152847-19152866 | MS.gene28267:CDS | 40.0% |
| ! | TTACCCTGTGTTTTACACAG+AGG | + | chr3.3:19155252-19155271 | None:intergenic | 40.0% |
| !! | GCATGAGAGATTAGTCTATG+TGG | - | chr3.3:19152621-19152640 | MS.gene28267:intron | 40.0% |
| !! | GTTTTGTTAGATCTCTCGAG+GGG | - | chr3.3:19152422-19152441 | MS.gene28267:intron | 40.0% |
| !! | TGGGAAGTACCGAATTCTAT+GGG | - | chr3.3:19154231-19154250 | MS.gene28267:intron | 40.0% |
| !! | TTAGATTTCAATGGTGGTGG+TGG | - | chr3.3:19155142-19155161 | MS.gene28267:intron | 40.0% |
| !!! | AGAAGGTGTTGTTGTCGTTT+TGG | + | chr3.3:19151980-19151999 | None:intergenic | 40.0% |
| !!! | CCAAGAGTTTTGTTGGTGAT+AGG | + | chr3.3:19152824-19152843 | None:intergenic | 40.0% |
| AACACACCTTATCTGAGGAG+TGG | - | chr3.3:19152566-19152585 | MS.gene28267:intron | 45.0% | |
| AAGAAATCCAAACGGAGGGA+CGG | + | chr3.3:19156646-19156665 | None:intergenic | 45.0% | |
| AAGATGATTCACCTCGCACA+AGG | + | chr3.3:19152969-19152988 | None:intergenic | 45.0% | |
| AATTCTGTTAAAGGGCAGCC+CGG | + | chr3.3:19155342-19155361 | None:intergenic | 45.0% | |
| ACACAACCACTCCTCAGATA+AGG | + | chr3.3:19152575-19152594 | None:intergenic | 45.0% | |
| ACTGCCTCTGTGTAAAACAC+AGG | - | chr3.3:19155245-19155264 | MS.gene28267:intron | 45.0% | |
| ACTGCTCACAATGCACCAAA+TGG | - | chr3.3:19155273-19155292 | MS.gene28267:intron | 45.0% | |
| AGCAAATGCTCTTAGTGCCA+AGG | - | chr3.3:19156136-19156155 | MS.gene28267:intron | 45.0% | |
| ATACCAAAGCCAAACCCCTT+TGG | + | chr3.3:19154352-19154371 | None:intergenic | 45.0% | |
| CCAACAAAACTCTTGGGTAG+TGG | - | chr3.3:19152828-19152847 | MS.gene28267:CDS | 45.0% | |
| CCATAAACCCTTCTAGTAGG+AGG | + | chr3.3:19156501-19156520 | None:intergenic | 45.0% | |
| CCTCCTACTAGAAGGGTTTA+TGG | - | chr3.3:19156498-19156517 | MS.gene28267:intron | 45.0% | |
| CTCTTAGTGCCAAGGTTTCA+CGG | - | chr3.3:19156144-19156163 | MS.gene28267:intron | 45.0% | |
| CTGCCTCTGTGTAAAACACA+GGG | - | chr3.3:19155246-19155265 | MS.gene28267:intron | 45.0% | |
| GCTTTCTAATGCAGCCTGTA+AGG | + | chr3.3:19154054-19154073 | None:intergenic | 45.0% | |
| GGCAAACCTCCTGTTGTTAA+AGG | + | chr3.3:19156008-19156027 | None:intergenic | 45.0% | |
| GTCTACAAATGCGGATTCCT+CGG | + | chr3.3:19156039-19156058 | None:intergenic | 45.0% | |
| TATGCGGGAACTTGTGATGA+TGG | + | chr3.3:19156821-19156840 | None:intergenic | 45.0% | |
| TCATTGGACTGAAAGGTCAC+CGG | - | chr3.3:19155208-19155227 | MS.gene28267:intron | 45.0% | |
| TCCTCAGATAAGGTGTGTTC+CGG | + | chr3.3:19152565-19152584 | None:intergenic | 45.0% | |
| TCTTAGTGCCAAGGTTTCAC+GGG | - | chr3.3:19156145-19156164 | MS.gene28267:intron | 45.0% | |
| ! | CCACACTCTTTTCACCAAAG+GGG | - | chr3.3:19154335-19154354 | MS.gene28267:intron | 45.0% |
| ! | CTCTTTTCACCAAAGGGGTT+TGG | - | chr3.3:19154340-19154359 | MS.gene28267:intron | 45.0% |
| ! | CTTTGGTGAAAAGAGTGTGG+CGG | + | chr3.3:19154335-19154354 | None:intergenic | 45.0% |
| ! | GCCACACTCTTTTCACCAAA+GGG | - | chr3.3:19154334-19154353 | MS.gene28267:intron | 45.0% |
| ! | TGTAGTAGTGATGGTGAGTC+AGG | - | chr3.3:19155381-19155400 | MS.gene28267:intron | 45.0% |
| !! | CCACTACCCAAGAGTTTTGT+TGG | + | chr3.3:19152831-19152850 | None:intergenic | 45.0% |
| !! | CTACAAAGGGCGTCTAAGAT+TGG | - | chr3.3:19156460-19156479 | MS.gene28267:intron | 45.0% |
| !! | GCTTATTTCTGTTAGGGGGA+GGG | - | chr3.3:19154610-19154629 | MS.gene28267:intron | 45.0% |
| !! | GTGGGAAGTACCGAATTCTA+TGG | - | chr3.3:19154230-19154249 | MS.gene28267:intron | 45.0% |
| !! | GTTTTGTTGCAGGAAGAGAG+TGG | - | chr3.3:19155012-19155031 | MS.gene28267:intron | 45.0% |
| !! | TGCTTATTTCTGTTAGGGGG+AGG | - | chr3.3:19154609-19154628 | MS.gene28267:intron | 45.0% |
| !! | TGGTGCTGTTGAAAAAGCTG+AGG | - | chr3.3:19152152-19152171 | MS.gene28267:intron | 45.0% |
| !! | TTAACCGGAGGTTCTGGATT+CGG | - | chr3.3:19152381-19152400 | MS.gene28267:intron | 45.0% |
| AACCTCCGGTTAAGCTGGAA+CGG | + | chr3.3:19152374-19152393 | None:intergenic | 50.0% | |
| AACGACGTGTCGTAACGACA+AGG | + | chr3.3:19152005-19152024 | None:intergenic | 50.0% | |
| ACCGGAACACACCTTATCTG+AGG | - | chr3.3:19152561-19152580 | MS.gene28267:intron | 50.0% | |
| ACGACGTGTCGTAACGACAA+GGG | + | chr3.3:19152004-19152023 | None:intergenic | 50.0% | |
| CCCCTTTGGTGAAAAGAGTG+TGG | + | chr3.3:19154338-19154357 | None:intergenic | 50.0% | |
| CTCACAATGCACCAAATGGC+GGG | - | chr3.3:19155277-19155296 | MS.gene28267:intron | 50.0% | |
| CTTTGCCAGGGAGAGAAAAC+AGG | + | chr3.3:19155095-19155114 | None:intergenic | 50.0% | |
| GAATCCGAATCCAGAACCTC+CGG | + | chr3.3:19152388-19152407 | None:intergenic | 50.0% | |
| GCAGCAGCTGAGAAACTCAA+TGG | - | chr3.3:19155826-19155845 | MS.gene28267:intron | 50.0% | |
| GCATCGCACATTAATGGTGC+TGG | - | chr3.3:19154978-19154997 | MS.gene28267:intron | 50.0% | |
| GCTCACAATGCACCAAATGG+CGG | - | chr3.3:19155276-19155295 | MS.gene28267:intron | 50.0% | |
| GTCAGTGTCCGTGCTTCATT+GGG | + | chr3.3:19152457-19152476 | None:intergenic | 50.0% | |
| GTCGTAACGACAAGGGAAGA+AGG | + | chr3.3:19151997-19152016 | None:intergenic | 50.0% | |
| TAGCAGGCCTCCTACTAGAA+GGG | - | chr3.3:19156491-19156510 | MS.gene28267:intron | 50.0% | |
| TCTGGCAGTGAAACAGTAGC+TGG | - | chr3.3:19154936-19154955 | MS.gene28267:intron | 50.0% | |
| TGCTGCGTTTGCATCCTCAA+CGG | + | chr3.3:19155812-19155831 | None:intergenic | 50.0% | |
| TGGTTCCGTTCCAGCTTAAC+CGG | - | chr3.3:19152366-19152385 | MS.gene28267:intron | 50.0% | |
| TGTCAGTGTCCGTGCTTCAT+TGG | + | chr3.3:19152458-19152477 | None:intergenic | 50.0% | |
| TTAGCAGGCCTCCTACTAGA+AGG | - | chr3.3:19156490-19156509 | MS.gene28267:intron | 50.0% | |
| TTCTTCTGAACAAGCCACGG+TGG | - | chr3.3:19152044-19152063 | MS.gene28267:intron | 50.0% | |
| ! | CGCCACACTCTTTTCACCAA+AGG | - | chr3.3:19154333-19154352 | MS.gene28267:intron | 50.0% |
| ! | CTGTTTTCTCTCCCTGGCAA+AGG | - | chr3.3:19155093-19155112 | MS.gene28267:intron | 50.0% |
| ! | CTTTTAGCACACCTTGTGCG+AGG | - | chr3.3:19152955-19152974 | MS.gene28267:CDS | 50.0% |
| ! | GCCGAAACCACTGGATTTTG+AGG | + | chr3.3:19156180-19156199 | None:intergenic | 50.0% |
| ! | TCACCAAAGGGGTTTGGCTT+TGG | - | chr3.3:19154346-19154365 | MS.gene28267:intron | 50.0% |
| !! | CAAAAGTGCCATTCGCACCA+CGG | - | chr3.3:19154906-19154925 | MS.gene28267:intron | 50.0% |
| !! | GATTTCAATGGTGGTGGTGG+TGG | - | chr3.3:19155145-19155164 | MS.gene28267:intron | 50.0% |
| !! | TGTTGGTGTCGTGTCAGTGT+TGG | - | chr3.3:19152520-19152539 | MS.gene28267:intron | 50.0% |
| AACAGCAGGAGAATCCACCG+TGG | + | chr3.3:19152061-19152080 | None:intergenic | 55.0% | |
| AACAGGAGGTTTGCCAGTCC+AGG | - | chr3.3:19156013-19156032 | MS.gene28267:intron | 55.0% | |
| ACAAAGCTCCCGCCTATGCA+GGG | + | chr3.3:19155316-19155335 | None:intergenic | 55.0% | |
| AGATACGACCGTGGTGCGAA+TGG | + | chr3.3:19154917-19154936 | None:intergenic | 55.0% | |
| AGTGTCCGTGCTTCATTGGG+CGG | + | chr3.3:19152454-19152473 | None:intergenic | 55.0% | |
| CAGTAGCTGGTCGTCAGTTG+AGG | - | chr3.3:19154949-19154968 | MS.gene28267:intron | 55.0% | |
| CCAAGGTTTCACGGGTTCCT+GGG | - | chr3.3:19156153-19156172 | MS.gene28267:intron | 55.0% | |
| CCTGGGACCTCAAAATCCAG+TGG | - | chr3.3:19156170-19156189 | MS.gene28267:intron | 55.0% | |
| GTTTGCCGCCCAATGAAGCA+CGG | - | chr3.3:19152446-19152465 | MS.gene28267:intron | 55.0% | |
| TCCAGAACCTCCGGTTAAGC+TGG | + | chr3.3:19152379-19152398 | None:intergenic | 55.0% | |
| TCCAGCTTAACCGGAGGTTC+TGG | - | chr3.3:19152375-19152394 | MS.gene28267:intron | 55.0% | |
| TGGAACGGAACCACCGCTAT+TGG | + | chr3.3:19152359-19152378 | None:intergenic | 55.0% | |
| TTCCGTTCCAGCTTAACCGG+AGG | - | chr3.3:19152369-19152388 | MS.gene28267:intron | 55.0% | |
| ! | CACGTCCTGTTTTCTCTCCC+TGG | - | chr3.3:19155087-19155106 | MS.gene28267:intron | 55.0% |
| !! | AATGGTGCTGGTGCAGCACT+GGG | - | chr3.3:19154990-19155009 | MS.gene28267:intron | 55.0% |
| !! | TAATGGTGCTGGTGCAGCAC+TGG | - | chr3.3:19154989-19155008 | MS.gene28267:intron | 55.0% |
| !! | TTCAATGGTGGTGGTGGTGG+TGG | - | chr3.3:19155148-19155167 | MS.gene28267:intron | 55.0% |
| !!! | CCACTGGATTTTGAGGTCCC+AGG | + | chr3.3:19156173-19156192 | None:intergenic | 55.0% |
| !!! | GCAGCACTGGGTTTTGTTGC+AGG | - | chr3.3:19155002-19155021 | MS.gene28267:intron | 55.0% |
| ATCTGGTCCGTCCCTCCGTT+TGG | - | chr3.3:19156636-19156655 | MS.gene28267:intron | 60.0% | |
| CAAATGCGGATTCCTCGGCC+TGG | + | chr3.3:19156034-19156053 | None:intergenic | 60.0% | |
| CACAAAGCTCCCGCCTATGC+AGG | + | chr3.3:19155317-19155336 | None:intergenic | 60.0% | |
| CACTGCCAGAGATACGACCG+TGG | + | chr3.3:19154926-19154945 | None:intergenic | 60.0% | |
| CCCAGGAACCCGTGAAACCT+TGG | + | chr3.3:19156156-19156175 | None:intergenic | 60.0% | |
| CCTATGCAGGGTCTGGGAAG+GGG | + | chr3.3:19155304-19155323 | None:intergenic | 60.0% | |
| CTTCCCAGACCCTGCATAGG+CGG | - | chr3.3:19155304-19155323 | MS.gene28267:intron | 60.0% | |
| GCCAAGGTTTCACGGGTTCC+TGG | - | chr3.3:19156152-19156171 | MS.gene28267:intron | 60.0% | |
| GCCTATGCAGGGTCTGGGAA+GGG | + | chr3.3:19155305-19155324 | None:intergenic | 60.0% | |
| TCGCACCACGGTCGTATCTC+TGG | - | chr3.3:19154918-19154937 | MS.gene28267:intron | 60.0% | |
| TTCCCAGACCCTGCATAGGC+GGG | - | chr3.3:19155305-19155324 | MS.gene28267:intron | 60.0% | |
| ! | TAGGCGGGAGCTTTGTGCAC+CGG | - | chr3.3:19155320-19155339 | MS.gene28267:intron | 60.0% |
| !! | AATGGTGGTGGTGGTGGTGG+TGG | - | chr3.3:19155151-19155170 | MS.gene28267:intron | 60.0% |
| !! | ATGGTGGTGGTGGTGGTGGT+GGG | - | chr3.3:19155152-19155171 | MS.gene28267:intron | 60.0% |
| AGGTTTGCCAGTCCAGGCCG+AGG | - | chr3.3:19156019-19156038 | MS.gene28267:intron | 65.0% | |
| CCCCTTCCCAGACCCTGCAT+AGG | - | chr3.3:19155301-19155320 | MS.gene28267:intron | 65.0% | |
| CGCCTATGCAGGGTCTGGGA+AGG | + | chr3.3:19155306-19155325 | None:intergenic | 65.0% | |
| CTCCCGCCTATGCAGGGTCT+GGG | + | chr3.3:19155310-19155329 | None:intergenic | 65.0% | |
| TGGGAAGGGGTCCCGCCATT+TGG | + | chr3.3:19155291-19155310 | None:intergenic | 65.0% | |
| ! | AGGCGGGAGCTTTGTGCACC+GGG | - | chr3.3:19155321-19155340 | MS.gene28267:intron | 65.0% |
| !! | TGGTGGTGGTGGTGGTGGGT+GGG | - | chr3.3:19155156-19155175 | MS.gene28267:intron | 65.0% |
| GCGGATTCCTCGGCCTGGAC+TGG | + | chr3.3:19156029-19156048 | None:intergenic | 70.0% | |
| GCTCCCGCCTATGCAGGGTC+TGG | + | chr3.3:19155311-19155330 | None:intergenic | 70.0% | |
| !! | GGTGGTGGTGGTGGTGGGTG+GGG | - | chr3.3:19155157-19155176 | MS.gene28267:intron | 70.0% |
| !! | GTGGTGGTGGTGGTGGGTGG+GGG | - | chr3.3:19155158-19155177 | MS.gene28267:intron | 70.0% |
| !! | GTGGTGGTGGTGGTGGTGGG+TGG | - | chr3.3:19155155-19155174 | MS.gene28267:intron | 70.0% |
| !! | TGGTGGTGGTGGTGGGTGGG+GGG | - | chr3.3:19155159-19155178 | MS.gene28267:intron | 70.0% |
| !! | GGTGGTGGGTGGGGGGGGAT+TGG | - | chr3.3:19155166-19155185 | MS.gene28267:intron | 75.0% |
| !! | GGTGGTGGTGGTGGGTGGGG+GGG | - | chr3.3:19155160-19155179 | MS.gene28267:intron | 75.0% |
| !! | GTGGTGGTGGTGGGTGGGGG+GGG | - | chr3.3:19155161-19155180 | MS.gene28267:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 19151904 | 19157161 | 19151904 | ID=MS.gene28267 |
| chr3.3 | mRNA | 19151904 | 19157161 | 19151904 | ID=MS.gene28267.t1;Parent=MS.gene28267 |
| chr3.3 | exon | 19156892 | 19157161 | 19156892 | ID=MS.gene28267.t1.exon1;Parent=MS.gene28267.t1 |
| chr3.3 | CDS | 19156892 | 19157161 | 19156892 | ID=cds.MS.gene28267.t1;Parent=MS.gene28267.t1 |
| chr3.3 | exon | 19153213 | 19153314 | 19153213 | ID=MS.gene28267.t1.exon2;Parent=MS.gene28267.t1 |
| chr3.3 | CDS | 19153213 | 19153314 | 19153213 | ID=cds.MS.gene28267.t1;Parent=MS.gene28267.t1 |
| chr3.3 | exon | 19152806 | 19153102 | 19152806 | ID=MS.gene28267.t1.exon3;Parent=MS.gene28267.t1 |
| chr3.3 | CDS | 19152806 | 19153102 | 19152806 | ID=cds.MS.gene28267.t1;Parent=MS.gene28267.t1 |
| chr3.3 | exon | 19151904 | 19151942 | 19151904 | ID=MS.gene28267.t1.exon4;Parent=MS.gene28267.t1 |
| chr3.3 | CDS | 19151904 | 19151942 | 19151904 | ID=cds.MS.gene28267.t1;Parent=MS.gene28267.t1 |
| Gene Sequence |
| Protein sequence |
