Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065537.t1 | XP_003617588.1 | 90.2 | 122 | 9 | 1 | 1 | 122 | 1 | 119 | 7.70E-52 | 213 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065537.t1 | G7K3L5 | 90.2 | 122 | 9 | 1 | 1 | 122 | 1 | 119 | 5.6e-52 | 213.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene065537 | 0.833067 | 6.60E-56 | -1.69E-46 |
| MS.gene049171 | MS.gene065537 | 0.881191 | 2.95E-70 | -1.69E-46 |
| MS.gene049173 | MS.gene065537 | 0.836847 | 7.36E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene065537 | 0.903224 | 4.33E-79 | -1.69E-46 |
| MS.gene049222 | MS.gene065537 | 0.887597 | 1.24E-72 | -1.69E-46 |
| MS.gene049285 | MS.gene065537 | 0.910137 | 2.62E-82 | -1.69E-46 |
| MS.gene049320 | MS.gene065537 | 0.894819 | 1.72E-75 | -1.69E-46 |
| MS.gene04939 | MS.gene065537 | 0.801765 | 7.71E-49 | -1.69E-46 |
| MS.gene049425 | MS.gene065537 | -0.816261 | 6.06E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene065537 | 0.848627 | 5.43E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene065537 | 0.870882 | 1.04E-66 | -1.69E-46 |
| MS.gene049615 | MS.gene065537 | 0.828088 | 1.09E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene065537 | 0.833586 | 4.90E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene065537 | 0.829983 | 3.79E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene065537 | 0.841198 | 5.49E-58 | -1.69E-46 |
| MS.gene050076 | MS.gene065537 | 0.8148 | 1.28E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene065537 | 0.830327 | 3.13E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene065537 | 0.902661 | 7.71E-79 | -1.69E-46 |
| MS.gene050165 | MS.gene065537 | 0.887012 | 2.07E-72 | -1.69E-46 |
| MS.gene050323 | MS.gene065537 | 0.810416 | 1.17E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene065537 | 0.86714 | 1.70E-65 | -1.69E-46 |
| MS.gene050353 | MS.gene065537 | -0.829693 | 4.46E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene065537 | 0.814588 | 1.43E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene065537 | 0.828869 | 7.07E-55 | -1.69E-46 |
| MS.gene050475 | MS.gene065537 | -0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene065537 | 0.878233 | 3.32E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene065537 | 0.882319 | 1.15E-70 | -1.69E-46 |
| MS.gene050538 | MS.gene065537 | 0.868583 | 5.86E-66 | -1.69E-46 |
| MS.gene050541 | MS.gene065537 | -0.810602 | 1.06E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene065537 | 0.83374 | 4.48E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene065537 | 0.866988 | 1.91E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene065537 | 0.884123 | 2.51E-71 | -1.69E-46 |
| MS.gene050675 | MS.gene065537 | 0.870259 | 1.67E-66 | -1.69E-46 |
| MS.gene050690 | MS.gene065537 | 0.807662 | 4.53E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene065537 | 0.897618 | 1.18E-76 | -1.69E-46 |
| MS.gene050747 | MS.gene065537 | 0.851665 | 7.66E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene065537 | 0.828642 | 8.03E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene065537 | 0.832289 | 1.03E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene065537 | 0.895069 | 1.36E-75 | -1.69E-46 |
| MS.gene050781 | MS.gene065537 | 0.809808 | 1.58E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene065537 | 0.823427 | 1.39E-53 | -1.69E-46 |
| MS.gene05081 | MS.gene065537 | 0.814944 | 1.19E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene065537 | 0.81419 | 1.75E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene065537 | 0.812825 | 3.49E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene065537 | 0.854365 | 1.29E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene065537 | 0.858667 | 7.04E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene065537 | 0.871695 | 5.62E-67 | -1.69E-46 |
| MS.gene05105 | MS.gene065537 | 0.818243 | 2.17E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene065537 | 0.84108 | 5.90E-58 | -1.69E-46 |
| MS.gene051317 | MS.gene065537 | 0.830366 | 3.06E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene065537 | 0.842715 | 2.18E-58 | -1.69E-46 |
| MS.gene051434 | MS.gene065537 | 0.837821 | 4.14E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene065537 | 0.851231 | 1.02E-60 | -1.69E-46 |
| MS.gene051666 | MS.gene065537 | 0.86402 | 1.64E-64 | -1.69E-46 |
| MS.gene051694 | MS.gene065537 | 0.856316 | 3.49E-62 | -1.69E-46 |
| MS.gene051734 | MS.gene065537 | 0.802313 | 5.95E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene065537 | 0.888974 | 3.67E-73 | -1.69E-46 |
| MS.gene051838 | MS.gene065537 | 0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene051858 | MS.gene065537 | 0.890088 | 1.35E-73 | -1.69E-46 |
| MS.gene051949 | MS.gene065537 | 0.835827 | 1.34E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene065537 | 0.816124 | 6.50E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene065537 | 0.885306 | 9.11E-72 | -1.69E-46 |
| MS.gene052290 | MS.gene065537 | 0.824819 | 6.57E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene065537 | 0.892379 | 1.68E-74 | -1.69E-46 |
| MS.gene052482 | MS.gene065537 | 0.820105 | 8.18E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene065537 | 0.829052 | 6.39E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene065537 | 0.831922 | 1.27E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene065537 | 0.830411 | 2.98E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene065537 | 0.807859 | 4.11E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene065537 | 0.862857 | 3.76E-64 | -1.69E-46 |
| MS.gene052670 | MS.gene065537 | 0.800597 | 1.34E-48 | -1.69E-46 |
| MS.gene052822 | MS.gene065537 | 0.81616 | 6.38E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene065537 | 0.823137 | 1.63E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene065537 | 0.821347 | 4.24E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene065537 | 0.851134 | 1.08E-60 | -1.69E-46 |
| MS.gene052872 | MS.gene065537 | 0.854049 | 1.59E-61 | -1.69E-46 |
| MS.gene052916 | MS.gene065537 | 0.828446 | 8.95E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene065537 | 0.817192 | 3.75E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene065537 | 0.828787 | 7.40E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene065537 | 0.811329 | 7.39E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene065537 | 0.864147 | 1.50E-64 | -1.69E-46 |
| MS.gene053107 | MS.gene065537 | 0.840874 | 6.69E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene065537 | 0.848977 | 4.35E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene065537 | 0.877857 | 4.49E-69 | -1.69E-46 |
| MS.gene053213 | MS.gene065537 | 0.903389 | 3.65E-79 | -1.69E-46 |
| MS.gene053286 | MS.gene065537 | 0.899114 | 2.73E-77 | -1.69E-46 |
| MS.gene053322 | MS.gene065537 | 0.888402 | 6.10E-73 | -1.69E-46 |
| MS.gene053436 | MS.gene065537 | 0.823273 | 1.51E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene065537 | 0.813363 | 2.66E-51 | -1.69E-46 |
| MS.gene053480 | MS.gene065537 | 0.808994 | 2.36E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene065537 | -0.813363 | 2.66E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene065537 | 0.860062 | 2.68E-63 | -1.69E-46 |
| MS.gene053579 | MS.gene065537 | 0.807217 | 5.63E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene065537 | 0.871047 | 9.20E-67 | -1.69E-46 |
| MS.gene053824 | MS.gene065537 | 0.833005 | 6.84E-56 | -1.69E-46 |
| MS.gene053915 | MS.gene065537 | 0.820618 | 6.24E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene065537 | 0.815693 | 8.11E-52 | -1.69E-46 |
| MS.gene054003 | MS.gene065537 | 0.801555 | 8.52E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene065537 | 0.822944 | 1.81E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene065537 | 0.814613 | 1.41E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene065537 | 0.828683 | 7.85E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene065537 | 0.880998 | 3.46E-70 | -1.69E-46 |
| MS.gene054642 | MS.gene065537 | 0.913583 | 5.20E-84 | -1.69E-46 |
| MS.gene054706 | MS.gene065537 | -0.810056 | 1.39E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene065537 | 0.813279 | 2.77E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene065537 | 0.838606 | 2.60E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene065537 | 0.836201 | 1.07E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene065537 | 0.838614 | 2.59E-57 | -1.69E-46 |
| MS.gene054927 | MS.gene065537 | 0.823726 | 1.19E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene065537 | 0.880308 | 6.11E-70 | -1.69E-46 |
| MS.gene05505 | MS.gene065537 | 0.83422 | 3.40E-56 | -1.69E-46 |
| MS.gene055154 | MS.gene065537 | -0.828879 | 7.03E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene065537 | 0.894854 | 1.67E-75 | -1.69E-46 |
| MS.gene055212 | MS.gene065537 | 0.841754 | 3.92E-58 | -1.69E-46 |
| MS.gene055224 | MS.gene065537 | 0.814794 | 1.29E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene065537 | 0.847643 | 1.02E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene065537 | 0.891597 | 3.44E-74 | -1.69E-46 |
| MS.gene055397 | MS.gene065537 | 0.850131 | 2.07E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene065537 | 0.869111 | 3.95E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene065537 | 0.89871 | 4.06E-77 | -1.69E-46 |
| MS.gene055577 | MS.gene065537 | 0.882249 | 1.22E-70 | -1.69E-46 |
| MS.gene055636 | MS.gene065537 | 0.841299 | 5.17E-58 | -1.69E-46 |
| MS.gene055638 | MS.gene065537 | 0.838532 | 2.72E-57 | -1.69E-46 |
| MS.gene055647 | MS.gene065537 | 0.882865 | 7.28E-71 | -1.69E-46 |
| MS.gene055722 | MS.gene065537 | 0.864889 | 8.78E-65 | -1.69E-46 |
| MS.gene055748 | MS.gene065537 | 0.817494 | 3.20E-52 | -1.69E-46 |
| MS.gene055750 | MS.gene065537 | 0.809574 | 1.77E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene065537 | 0.810204 | 1.29E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene065537 | 0.876043 | 1.91E-68 | -1.69E-46 |
| MS.gene055941 | MS.gene065537 | 0.85931 | 4.52E-63 | -1.69E-46 |
| MS.gene055956 | MS.gene065537 | -0.844359 | 7.94E-59 | -1.69E-46 |
| MS.gene056083 | MS.gene065537 | 0.866385 | 2.96E-65 | -1.69E-46 |
| MS.gene056374 | MS.gene065537 | 0.882812 | 7.61E-71 | -1.69E-46 |
| MS.gene056409 | MS.gene065537 | 0.801901 | 7.24E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene065537 | 0.800427 | 1.45E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene065537 | 0.835814 | 1.35E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene065537 | 0.849278 | 3.58E-60 | -1.69E-46 |
| MS.gene056549 | MS.gene065537 | 0.837672 | 4.53E-57 | -1.69E-46 |
| MS.gene056550 | MS.gene065537 | -0.825142 | 5.51E-54 | -1.69E-46 |
| MS.gene056610 | MS.gene065537 | 0.812392 | 4.34E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene065537 | 0.91044 | 1.87E-82 | -1.69E-46 |
| MS.gene056692 | MS.gene065537 | 0.863997 | 1.67E-64 | -1.69E-46 |
| MS.gene056796 | MS.gene065537 | 0.80138 | 9.25E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene065537 | 0.80446 | 2.14E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene065537 | 0.818359 | 2.04E-52 | -1.69E-46 |
| MS.gene056946 | MS.gene065537 | 0.813628 | 2.32E-51 | -1.69E-46 |
| MS.gene056947 | MS.gene065537 | 0.807174 | 5.75E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene065537 | 0.845611 | 3.65E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene065537 | 0.831747 | 1.40E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene065537 | 0.881405 | 2.47E-70 | -1.69E-46 |
| MS.gene057146 | MS.gene065537 | 0.838802 | 2.32E-57 | -1.69E-46 |
| MS.gene057196 | MS.gene065537 | 0.836776 | 7.68E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene065537 | 0.873404 | 1.51E-67 | -1.69E-46 |
| MS.gene057332 | MS.gene065537 | 0.826538 | 2.57E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene065537 | 0.894932 | 1.55E-75 | -1.69E-46 |
| MS.gene057658 | MS.gene065537 | 0.85769 | 1.37E-62 | -1.69E-46 |
| MS.gene057831 | MS.gene065537 | 0.860178 | 2.48E-63 | -1.69E-46 |
| MS.gene057926 | MS.gene065537 | 0.844573 | 6.95E-59 | -1.69E-46 |
| MS.gene058019 | MS.gene065537 | 0.87124 | 7.95E-67 | -1.69E-46 |
| MS.gene058130 | MS.gene065537 | 0.809503 | 1.83E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene065537 | 0.839528 | 1.50E-57 | -1.69E-46 |
| MS.gene058338 | MS.gene065537 | 0.839396 | 1.63E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene065537 | 0.852677 | 3.94E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene065537 | 0.913434 | 6.18E-84 | -1.69E-46 |
| MS.gene058544 | MS.gene065537 | 0.878102 | 3.68E-69 | -1.69E-46 |
| MS.gene058660 | MS.gene065537 | 0.812747 | 3.63E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene065537 | 0.867958 | 9.32E-66 | -1.69E-46 |
| MS.gene058773 | MS.gene065537 | 0.882204 | 1.27E-70 | -1.69E-46 |
| MS.gene058838 | MS.gene065537 | 0.838944 | 2.13E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene065537 | 0.859365 | 4.35E-63 | -1.69E-46 |
| MS.gene058840 | MS.gene065537 | -0.824643 | 7.22E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene065537 | 0.878815 | 2.07E-69 | -1.69E-46 |
| MS.gene059023 | MS.gene065537 | 0.879221 | 1.49E-69 | -1.69E-46 |
| MS.gene059029 | MS.gene065537 | 0.889691 | 1.93E-73 | -1.69E-46 |
| MS.gene05912 | MS.gene065537 | 0.801687 | 8.01E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene065537 | 0.846888 | 1.64E-59 | -1.69E-46 |
| MS.gene05914 | MS.gene065537 | 0.812851 | 3.44E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene065537 | 0.885 | 1.18E-71 | -1.69E-46 |
| MS.gene059536 | MS.gene065537 | 0.871419 | 6.94E-67 | -1.69E-46 |
| MS.gene059677 | MS.gene065537 | 0.91069 | 1.41E-82 | -1.69E-46 |
| MS.gene059718 | MS.gene065537 | 0.894595 | 2.13E-75 | -1.69E-46 |
| MS.gene059756 | MS.gene065537 | 0.872609 | 2.79E-67 | -1.69E-46 |
| MS.gene059801 | MS.gene065537 | 0.817797 | 2.74E-52 | -1.69E-46 |
| MS.gene059858 | MS.gene065537 | 0.816431 | 5.55E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene065537 | 0.833096 | 6.49E-56 | -1.69E-46 |
| MS.gene059902 | MS.gene065537 | 0.886453 | 3.38E-72 | -1.69E-46 |
| MS.gene059960 | MS.gene065537 | 0.885708 | 6.44E-72 | -1.69E-46 |
| MS.gene060193 | MS.gene065537 | 0.836649 | 8.27E-57 | -1.69E-46 |
| MS.gene060341 | MS.gene065537 | 0.8092 | 2.13E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene065537 | 0.82839 | 9.23E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene065537 | 0.852904 | 3.40E-61 | -1.69E-46 |
| MS.gene060727 | MS.gene065537 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene065537 | 0.834523 | 2.85E-56 | -1.69E-46 |
| MS.gene06074 | MS.gene065537 | -0.803921 | 2.77E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene065537 | 0.856131 | 3.96E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene065537 | 0.858631 | 7.21E-63 | -1.69E-46 |
| MS.gene060804 | MS.gene065537 | 0.884536 | 1.76E-71 | -1.69E-46 |
| MS.gene060818 | MS.gene065537 | 0.825876 | 3.69E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene065537 | 0.830117 | 3.52E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene065537 | 0.881425 | 2.43E-70 | -1.69E-46 |
| MS.gene060982 | MS.gene065537 | 0.827478 | 1.53E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene065537 | 0.830604 | 2.67E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene065537 | 0.837541 | 4.89E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene065537 | 0.884568 | 1.72E-71 | -1.69E-46 |
| MS.gene061200 | MS.gene065537 | 0.882551 | 9.47E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065537.t1 | MTR_5g093240 | 90.164 | 122 | 9 | 1 | 1 | 122 | 1 | 119 | 2.60e-76 | 221 |
| MS.gene065537.t1 | MTR_5g093240 | 84.884 | 86 | 10 | 1 | 1 | 86 | 1 | 83 | 1.21e-45 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 34 sgRNAs with CRISPR-Local
Find 40 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTCAGTAAGTTCATTA+AGG | 0.284385 | 5.1:-74392906 | MS.gene065537:CDS |
| CTTCTGCATCATCAACCTTC+TGG | 0.304356 | 5.1:+74392569 | None:intergenic |
| CGCAGCAGCAACATTATCTA+AGG | 0.361910 | 5.1:-74392993 | MS.gene065537:CDS |
| GCAGCAACAACAATGATATC+TGG | 0.364461 | 5.1:+74392871 | None:intergenic |
| GCACAACACAAAACTACTTT+GGG | 0.366214 | 5.1:-74392965 | MS.gene065537:CDS |
| ATGGATCGGCGGGTTGTGGC+AGG | 0.389363 | 5.1:+74392842 | None:intergenic |
| AAATACTTGCTTATAAAATC+TGG | 0.401289 | 5.1:+74392616 | None:intergenic |
| GAAGCAATGAAGAGGGGAGG+TGG | 0.407582 | 5.1:+74393037 | None:intergenic |
| CTATGTGGCATGGTCTTGCT+TGG | 0.417895 | 5.1:+74392937 | None:intergenic |
| AGCACAACACAAAACTACTT+TGG | 0.452055 | 5.1:-74392966 | MS.gene065537:CDS |
| CAATGATATCTGGAATTGCC+TGG | 0.462076 | 5.1:+74392881 | None:intergenic |
| TGAAGTATACTGATATAAGC+AGG | 0.464588 | 5.1:+74392656 | None:intergenic |
| CTTACTCGGAGAAAAGTAGA+TGG | 0.479013 | 5.1:+74392823 | None:intergenic |
| GTAGATGGATCGGCGGGTTG+TGG | 0.490348 | 5.1:+74392838 | None:intergenic |
| GAAAAGAACCGAACCTTACT+CGG | 0.537160 | 5.1:+74392809 | None:intergenic |
| CTTAGATAATGTTGCTGCTG+CGG | 0.540896 | 5.1:+74392994 | None:intergenic |
| TTTGGATTTGATAAACTAGA+GGG | 0.553590 | 5.1:-74392595 | MS.gene065537:CDS |
| TGCATGAGAAGCAATGAAGA+GGG | 0.563172 | 5.1:+74393030 | None:intergenic |
| TGGATCGGCGGGTTGTGGCA+GGG | 0.568272 | 5.1:+74392843 | None:intergenic |
| AATGATATCTGGAATTGCCT+GGG | 0.588413 | 5.1:+74392882 | None:intergenic |
| GAAGAAAAGTGCTTACTATG+TGG | 0.588606 | 5.1:+74392922 | None:intergenic |
| AGAAAAGTAGATGGATCGGC+GGG | 0.589351 | 5.1:+74392832 | None:intergenic |
| GCAGCAACATTATCTAAGGA+TGG | 0.606428 | 5.1:-74392989 | MS.gene065537:CDS |
| AGTAAGTTCATTAAGGACCC+AGG | 0.609846 | 5.1:-74392899 | MS.gene065537:CDS |
| TCGGAGAAAAGTAGATGGAT+CGG | 0.611697 | 5.1:+74392828 | None:intergenic |
| TAAACTAGAGGGAGACCAGA+AGG | 0.616294 | 5.1:-74392584 | MS.gene065537:CDS |
| AAAGTGCTTACTATGTGGCA+TGG | 0.619717 | 5.1:+74392927 | None:intergenic |
| GAAGTATACTGATATAAGCA+GGG | 0.632422 | 5.1:+74392657 | None:intergenic |
| GGGGAGGTGGAGACAAGTCA+TGG | 0.642574 | 5.1:+74393050 | None:intergenic |
| ATGCATGAGAAGCAATGAAG+AGG | 0.647708 | 5.1:+74393029 | None:intergenic |
| TGAGAAGCAATGAAGAGGGG+AGG | 0.663602 | 5.1:+74393034 | None:intergenic |
| GAGAAAAGTAGATGGATCGG+CGG | 0.667923 | 5.1:+74392831 | None:intergenic |
| GCATGAGAAGCAATGAAGAG+GGG | 0.705476 | 5.1:+74393031 | None:intergenic |
| CACAACACAAAACTACTTTG+GGG | 0.712340 | 5.1:-74392964 | MS.gene065537:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATTTATTTTTTTACACT+AGG | - | chr5.1:74392862-74392881 | MS.gene065537:CDS | 15.0% |
| !! | AAATACTTGCTTATAAAATC+TGG | + | chr5.1:74392996-74393015 | None:intergenic | 20.0% |
| !!! | GATTTTATAAGCAAGTATTT+TGG | - | chr5.1:74392996-74393015 | MS.gene065537:CDS | 20.0% |
| ! | GTTCATTATGTCATATTTCA+TGG | - | chr5.1:74392831-74392850 | MS.gene065537:CDS | 25.0% |
| ! | TTTCTTCAGTAAGTTCATTA+AGG | - | chr5.1:74392703-74392722 | MS.gene065537:intron | 25.0% |
| ! | TTTGGATTTGATAAACTAGA+GGG | - | chr5.1:74393014-74393033 | MS.gene065537:CDS | 25.0% |
| !! | TTTTGGATTTGATAAACTAG+AGG | - | chr5.1:74393013-74393032 | MS.gene065537:CDS | 25.0% |
| GAAGTATACTGATATAAGCA+GGG | + | chr5.1:74392955-74392974 | None:intergenic | 30.0% | |
| TGAAGTATACTGATATAAGC+AGG | + | chr5.1:74392956-74392975 | None:intergenic | 30.0% | |
| ACAAGCTGCAAACTTAAACA+AGG | - | chr5.1:74392892-74392911 | MS.gene065537:CDS | 35.0% | |
| AGCACAACACAAAACTACTT+TGG | - | chr5.1:74392643-74392662 | MS.gene065537:CDS | 35.0% | |
| CACAACACAAAACTACTTTG+GGG | - | chr5.1:74392645-74392664 | MS.gene065537:CDS | 35.0% | |
| GCACAACACAAAACTACTTT+GGG | - | chr5.1:74392644-74392663 | MS.gene065537:CDS | 35.0% | |
| ! | AATGATATCTGGAATTGCCT+GGG | + | chr5.1:74392730-74392749 | None:intergenic | 35.0% |
| !! | GAAGAAAAGTGCTTACTATG+TGG | + | chr5.1:74392690-74392709 | None:intergenic | 35.0% |
| AGTAAGTTCATTAAGGACCC+AGG | - | chr5.1:74392710-74392729 | MS.gene065537:intron | 40.0% | |
| ATGCATGAGAAGCAATGAAG+AGG | + | chr5.1:74392583-74392602 | None:intergenic | 40.0% | |
| CTTACTCGGAGAAAAGTAGA+TGG | + | chr5.1:74392789-74392808 | None:intergenic | 40.0% | |
| CTTAGATAATGTTGCTGCTG+CGG | + | chr5.1:74392618-74392637 | None:intergenic | 40.0% | |
| GAAAAGAACCGAACCTTACT+CGG | + | chr5.1:74392803-74392822 | None:intergenic | 40.0% | |
| GCAGCAACAACAATGATATC+TGG | + | chr5.1:74392741-74392760 | None:intergenic | 40.0% | |
| GCAGCAACATTATCTAAGGA+TGG | - | chr5.1:74392620-74392639 | MS.gene065537:CDS | 40.0% | |
| TCGGAGAAAAGTAGATGGAT+CGG | + | chr5.1:74392784-74392803 | None:intergenic | 40.0% | |
| TGCATGAGAAGCAATGAAGA+GGG | + | chr5.1:74392582-74392601 | None:intergenic | 40.0% | |
| ! | AAAGTGCTTACTATGTGGCA+TGG | + | chr5.1:74392685-74392704 | None:intergenic | 40.0% |
| ! | ACTTTTCTCCGAGTAAGGTT+CGG | - | chr5.1:74392792-74392811 | MS.gene065537:intron | 40.0% |
| ! | CAATGATATCTGGAATTGCC+TGG | + | chr5.1:74392731-74392750 | None:intergenic | 40.0% |
| !! | CATCTACTTTTCTCCGAGTA+AGG | - | chr5.1:74392787-74392806 | MS.gene065537:intron | 40.0% |
| AGAAAAGTAGATGGATCGGC+GGG | + | chr5.1:74392780-74392799 | None:intergenic | 45.0% | |
| CGCAGCAGCAACATTATCTA+AGG | - | chr5.1:74392616-74392635 | MS.gene065537:CDS | 45.0% | |
| CTTCTGCATCATCAACCTTC+TGG | + | chr5.1:74393043-74393062 | None:intergenic | 45.0% | |
| GAGAAAAGTAGATGGATCGG+CGG | + | chr5.1:74392781-74392800 | None:intergenic | 45.0% | |
| GCATGAGAAGCAATGAAGAG+GGG | + | chr5.1:74392581-74392600 | None:intergenic | 45.0% | |
| TAAACTAGAGGGAGACCAGA+AGG | - | chr5.1:74393025-74393044 | MS.gene065537:CDS | 45.0% | |
| TGAGAAGCAATGAAGAGGGG+AGG | + | chr5.1:74392578-74392597 | None:intergenic | 50.0% | |
| ! | CTATGTGGCATGGTCTTGCT+TGG | + | chr5.1:74392675-74392694 | None:intergenic | 50.0% |
| GAAGCAATGAAGAGGGGAGG+TGG | + | chr5.1:74392575-74392594 | None:intergenic | 55.0% | |
| !! | GTAGATGGATCGGCGGGTTG+TGG | + | chr5.1:74392774-74392793 | None:intergenic | 60.0% |
| !! | ATGGATCGGCGGGTTGTGGC+AGG | + | chr5.1:74392770-74392789 | None:intergenic | 65.0% |
| !! | TGGATCGGCGGGTTGTGGCA+GGG | + | chr5.1:74392769-74392788 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 74392561 | 74393070 | 74392561 | ID=MS.gene065537 |
| chr5.1 | mRNA | 74392561 | 74393070 | 74392561 | ID=MS.gene065537.t1;Parent=MS.gene065537 |
| chr5.1 | exon | 74392823 | 74393070 | 74392823 | ID=MS.gene065537.t1.exon1;Parent=MS.gene065537.t1 |
| chr5.1 | CDS | 74392823 | 74393070 | 74392823 | ID=cds.MS.gene065537.t1;Parent=MS.gene065537.t1 |
| chr5.1 | exon | 74392561 | 74392681 | 74392561 | ID=MS.gene065537.t1.exon2;Parent=MS.gene065537.t1 |
| chr5.1 | CDS | 74392561 | 74392681 | 74392561 | ID=cds.MS.gene065537.t1;Parent=MS.gene065537.t1 |
| Gene Sequence |
| Protein sequence |
