Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46942.t1 | RHN66809.1 | 98.7 | 395 | 5 | 0 | 1 | 395 | 1 | 395 | 3.40E-226 | 793.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46942.t1 | Q9SSU8 | 76.1 | 351 | 75 | 2 | 45 | 386 | 44 | 394 | 7.2e-156 | 551.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46942.t1 | A0A396IMG0 | 98.7 | 395 | 5 | 0 | 1 | 395 | 1 | 395 | 2.5e-226 | 793.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene46942 | 0.864046 | 1.61E-64 | -1.69E-46 |
| MS.gene049171 | MS.gene46942 | 0.802386 | 5.75E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene46942 | 0.839291 | 1.73E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene46942 | 0.830236 | 3.29E-55 | -1.69E-46 |
| MS.gene049236 | MS.gene46942 | -0.809386 | 1.94E-50 | -1.69E-46 |
| MS.gene049284 | MS.gene46942 | 0.800836 | 1.20E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene46942 | 0.814018 | 1.91E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene46942 | 0.804407 | 2.19E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene46942 | 0.848786 | 4.91E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene46942 | 0.849009 | 4.26E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene46942 | 0.875995 | 1.98E-68 | -1.69E-46 |
| MS.gene049396 | MS.gene46942 | 0.841001 | 6.19E-58 | -1.69E-46 |
| MS.gene049425 | MS.gene46942 | -0.814801 | 1.28E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene46942 | 0.860532 | 1.93E-63 | -1.69E-46 |
| MS.gene049488 | MS.gene46942 | 0.801983 | 6.96E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene46942 | 0.83167 | 1.46E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene46942 | 0.876453 | 1.38E-68 | -1.69E-46 |
| MS.gene049661 | MS.gene46942 | 0.870678 | 1.22E-66 | -1.69E-46 |
| MS.gene049662 | MS.gene46942 | 0.862267 | 5.72E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene46942 | 0.897531 | 1.28E-76 | -1.69E-46 |
| MS.gene050076 | MS.gene46942 | 0.82247 | 2.33E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene46942 | 0.832296 | 1.03E-55 | -1.69E-46 |
| MS.gene050397 | MS.gene46942 | 0.849492 | 3.12E-60 | -1.69E-46 |
| MS.gene050432 | MS.gene46942 | 0.842692 | 2.21E-58 | -1.69E-46 |
| MS.gene050464 | MS.gene46942 | 0.824175 | 9.31E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene46942 | 0.839452 | 1.57E-57 | -1.69E-46 |
| MS.gene050538 | MS.gene46942 | 0.813466 | 2.52E-51 | -1.69E-46 |
| MS.gene05053 | MS.gene46942 | 0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene46942 | 0.890396 | 1.02E-73 | -1.69E-46 |
| MS.gene050670 | MS.gene46942 | 0.901573 | 2.34E-78 | -1.69E-46 |
| MS.gene050686 | MS.gene46942 | 0.835891 | 1.29E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene46942 | 0.841577 | 4.37E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene46942 | 0.846573 | 2.00E-59 | -1.69E-46 |
| MS.gene050770 | MS.gene46942 | 0.849682 | 2.77E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene46942 | 0.892421 | 1.61E-74 | -1.69E-46 |
| MS.gene050812 | MS.gene46942 | 0.806923 | 6.50E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene46942 | 0.834131 | 3.58E-56 | -1.69E-46 |
| MS.gene050971 | MS.gene46942 | 0.823075 | 1.68E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene46942 | 0.837749 | 4.33E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene46942 | 0.915888 | 3.44E-85 | -1.69E-46 |
| MS.gene051228 | MS.gene46942 | 0.834129 | 3.58E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene46942 | 0.883642 | 3.77E-71 | -1.69E-46 |
| MS.gene051471 | MS.gene46942 | 0.802153 | 6.42E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene46942 | 0.814096 | 1.83E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene46942 | 0.808388 | 3.17E-50 | -1.69E-46 |
| MS.gene051605 | MS.gene46942 | 0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene46942 | 0.883554 | 4.07E-71 | -1.69E-46 |
| MS.gene051692 | MS.gene46942 | 0.851382 | 9.20E-61 | -1.69E-46 |
| MS.gene051694 | MS.gene46942 | 0.841235 | 5.37E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene46942 | 0.87672 | 1.12E-68 | -1.69E-46 |
| MS.gene051874 | MS.gene46942 | 0.839592 | 1.45E-57 | -1.69E-46 |
| MS.gene051877 | MS.gene46942 | 0.855736 | 5.17E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene46942 | 0.836319 | 1.00E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene46942 | 0.866367 | 3.00E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene46942 | 0.852722 | 3.83E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene46942 | 0.840393 | 8.94E-58 | -1.69E-46 |
| MS.gene052290 | MS.gene46942 | 0.816099 | 6.59E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene46942 | 0.888702 | 4.67E-73 | -1.69E-46 |
| MS.gene052322 | MS.gene46942 | 0.863932 | 1.75E-64 | -1.69E-46 |
| MS.gene052326 | MS.gene46942 | 0.81143 | 7.03E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene46942 | 0.837973 | 3.79E-57 | -1.69E-46 |
| MS.gene052346 | MS.gene46942 | 0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene46942 | 0.852022 | 6.06E-61 | -1.69E-46 |
| MS.gene05240 | MS.gene46942 | -0.80493 | 1.70E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene46942 | 0.81606 | 6.72E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene46942 | 0.902129 | 1.33E-78 | -1.69E-46 |
| MS.gene052481 | MS.gene46942 | 0.86887 | 4.73E-66 | -1.69E-46 |
| MS.gene052484 | MS.gene46942 | 0.878116 | 3.64E-69 | -1.69E-46 |
| MS.gene052485 | MS.gene46942 | 0.875522 | 2.88E-68 | -1.69E-46 |
| MS.gene052501 | MS.gene46942 | 0.829841 | 4.11E-55 | -1.69E-46 |
| MS.gene052505 | MS.gene46942 | 0.838338 | 3.05E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene46942 | 0.852958 | 3.28E-61 | -1.69E-46 |
| MS.gene052870 | MS.gene46942 | 0.819095 | 1.39E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene46942 | 0.814286 | 1.66E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene46942 | 0.809024 | 2.32E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene46942 | 0.81292 | 3.33E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene46942 | 0.826363 | 2.83E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene46942 | 0.869751 | 2.45E-66 | -1.69E-46 |
| MS.gene053104 | MS.gene46942 | 0.871846 | 5.01E-67 | -1.69E-46 |
| MS.gene053107 | MS.gene46942 | 0.804671 | 1.93E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene46942 | 0.83163 | 1.50E-55 | -1.69E-46 |
| MS.gene053209 | MS.gene46942 | 0.840888 | 6.63E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene46942 | 0.857183 | 1.94E-62 | -1.69E-46 |
| MS.gene053286 | MS.gene46942 | 0.842262 | 2.88E-58 | -1.69E-46 |
| MS.gene053322 | MS.gene46942 | 0.885391 | 8.47E-72 | -1.69E-46 |
| MS.gene053384 | MS.gene46942 | 0.811265 | 7.63E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene46942 | 0.883578 | 3.99E-71 | -1.69E-46 |
| MS.gene053574 | MS.gene46942 | 0.866856 | 2.10E-65 | -1.69E-46 |
| MS.gene053632 | MS.gene46942 | 0.828064 | 1.11E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene46942 | 0.864645 | 1.05E-64 | -1.69E-46 |
| MS.gene053813 | MS.gene46942 | 0.86124 | 1.18E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene46942 | 0.818344 | 2.06E-52 | -1.69E-46 |
| MS.gene053912 | MS.gene46942 | 0.834748 | 2.50E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene46942 | 0.857059 | 2.11E-62 | -1.69E-46 |
| MS.gene054003 | MS.gene46942 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene46942 | 0.824204 | 9.16E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene46942 | 0.84314 | 1.68E-58 | -1.69E-46 |
| MS.gene054543 | MS.gene46942 | 0.813236 | 2.84E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene46942 | 0.801485 | 8.81E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene46942 | 0.846236 | 2.47E-59 | -1.69E-46 |
| MS.gene054802 | MS.gene46942 | 0.837446 | 5.17E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene46942 | 0.835075 | 2.07E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene46942 | 0.836628 | 8.37E-57 | -1.69E-46 |
| MS.gene054927 | MS.gene46942 | 0.815684 | 8.15E-52 | -1.69E-46 |
| MS.gene054955 | MS.gene46942 | 0.860487 | 2.00E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene46942 | 0.917004 | 8.99E-86 | -1.69E-46 |
| MS.gene055116 | MS.gene46942 | 0.886461 | 3.35E-72 | -1.69E-46 |
| MS.gene055206 | MS.gene46942 | 0.849847 | 2.49E-60 | -1.69E-46 |
| MS.gene055224 | MS.gene46942 | 0.827245 | 1.74E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene46942 | 0.868221 | 7.67E-66 | -1.69E-46 |
| MS.gene055289 | MS.gene46942 | 0.852657 | 4.00E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene46942 | 0.800175 | 1.63E-48 | -1.69E-46 |
| MS.gene055397 | MS.gene46942 | 0.828016 | 1.14E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene46942 | 0.821208 | 4.56E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene46942 | 0.818163 | 2.26E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene46942 | 0.848003 | 8.09E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene46942 | 0.819732 | 9.95E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene46942 | 0.831536 | 1.58E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene46942 | 0.808998 | 2.35E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene46942 | 0.838076 | 3.56E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene46942 | 0.871159 | 8.45E-67 | -1.69E-46 |
| MS.gene055909 | MS.gene46942 | 0.836009 | 1.20E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene46942 | 0.837161 | 6.12E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene46942 | 0.906714 | 1.10E-80 | -1.69E-46 |
| MS.gene055941 | MS.gene46942 | 0.846934 | 1.59E-59 | -1.69E-46 |
| MS.gene056083 | MS.gene46942 | 0.823702 | 1.20E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene46942 | 0.867606 | 1.21E-65 | -1.69E-46 |
| MS.gene056374 | MS.gene46942 | 0.828257 | 9.94E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene46942 | 0.84708 | 1.45E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene46942 | 0.856624 | 2.84E-62 | -1.69E-46 |
| MS.gene056422 | MS.gene46942 | 0.850874 | 1.28E-60 | -1.69E-46 |
| MS.gene056448 | MS.gene46942 | 0.83788 | 4.00E-57 | -1.69E-46 |
| MS.gene056487 | MS.gene46942 | 0.817687 | 2.90E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene46942 | 0.909031 | 8.92E-82 | -1.69E-46 |
| MS.gene056549 | MS.gene46942 | 0.808185 | 3.51E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene46942 | 0.845903 | 3.04E-59 | -1.69E-46 |
| MS.gene05664 | MS.gene46942 | 0.819721 | 1.00E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene46942 | 0.815839 | 7.52E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene46942 | 0.81797 | 2.50E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene46942 | 0.824426 | 8.12E-54 | -1.69E-46 |
| MS.gene056897 | MS.gene46942 | 0.822755 | 2.00E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene46942 | 0.849534 | 3.04E-60 | -1.69E-46 |
| MS.gene05702 | MS.gene46942 | 0.822589 | 2.19E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene46942 | 0.868906 | 4.61E-66 | -1.69E-46 |
| MS.gene057123 | MS.gene46942 | 0.860222 | 2.40E-63 | -1.69E-46 |
| MS.gene057124 | MS.gene46942 | 0.839303 | 1.72E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene46942 | 0.863013 | 3.37E-64 | -1.69E-46 |
| MS.gene057146 | MS.gene46942 | 0.902827 | 6.51E-79 | -1.69E-46 |
| MS.gene057285 | MS.gene46942 | 0.822556 | 2.22E-53 | -1.69E-46 |
| MS.gene057295 | MS.gene46942 | 0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene057310 | MS.gene46942 | 0.811742 | 6.01E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene46942 | 0.862495 | 4.87E-64 | -1.69E-46 |
| MS.gene05733 | MS.gene46942 | 0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene46942 | 0.829354 | 5.39E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene46942 | 0.894715 | 1.90E-75 | -1.69E-46 |
| MS.gene057448 | MS.gene46942 | 0.809302 | 2.02E-50 | -1.69E-46 |
| MS.gene057449 | MS.gene46942 | 0.807656 | 4.54E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene46942 | 0.812071 | 5.10E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene46942 | 0.844335 | 8.06E-59 | -1.69E-46 |
| MS.gene057749 | MS.gene46942 | 0.832395 | 9.69E-56 | -1.69E-46 |
| MS.gene057779 | MS.gene46942 | 0.810504 | 1.12E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene46942 | 0.843894 | 1.06E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene46942 | 0.842325 | 2.77E-58 | -1.69E-46 |
| MS.gene057926 | MS.gene46942 | 0.865692 | 4.91E-65 | -1.69E-46 |
| MS.gene057927 | MS.gene46942 | 0.822577 | 2.20E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene46942 | 0.810747 | 9.88E-51 | -1.69E-46 |
| MS.gene058006 | MS.gene46942 | 0.8687 | 5.37E-66 | -1.69E-46 |
| MS.gene058007 | MS.gene46942 | 0.839248 | 1.78E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene46942 | 0.869556 | 2.83E-66 | -1.69E-46 |
| MS.gene058075 | MS.gene46942 | 0.801589 | 8.38E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene46942 | 0.819953 | 8.86E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene46942 | 0.819983 | 8.72E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene46942 | 0.826921 | 2.08E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene46942 | 0.820602 | 6.29E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene46942 | 0.85114 | 1.08E-60 | -1.69E-46 |
| MS.gene058323 | MS.gene46942 | 0.841184 | 5.54E-58 | -1.69E-46 |
| MS.gene058365 | MS.gene46942 | 0.808617 | 2.84E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene46942 | 0.859996 | 2.81E-63 | -1.69E-46 |
| MS.gene05837 | MS.gene46942 | 0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene46942 | 0.837463 | 5.12E-57 | -1.69E-46 |
| MS.gene058444 | MS.gene46942 | 0.809227 | 2.10E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene46942 | 0.893438 | 6.29E-75 | -1.69E-46 |
| MS.gene058700 | MS.gene46942 | 0.817244 | 3.65E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene46942 | 0.813808 | 2.12E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene46942 | 0.820799 | 5.67E-53 | -1.69E-46 |
| MS.gene058790 | MS.gene46942 | 0.803781 | 2.96E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene46942 | 0.818966 | 1.49E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene46942 | 0.822963 | 1.79E-53 | -1.69E-46 |
| MS.gene058840 | MS.gene46942 | -0.805151 | 1.53E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene46942 | 0.865678 | 4.96E-65 | -1.69E-46 |
| MS.gene058993 | MS.gene46942 | 0.806715 | 7.19E-50 | -1.69E-46 |
| MS.gene058995 | MS.gene46942 | 0.829074 | 6.31E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene46942 | 0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene46942 | 0.825377 | 4.85E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene46942 | 0.859578 | 3.75E-63 | -1.69E-46 |
| MS.gene05913 | MS.gene46942 | 0.83348 | 5.21E-56 | -1.69E-46 |
| MS.gene059141 | MS.gene46942 | 0.81011 | 1.36E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene46942 | 0.832168 | 1.10E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene46942 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene46942 | 0.862692 | 4.23E-64 | -1.69E-46 |
| MS.gene059366 | MS.gene46942 | 0.847095 | 1.44E-59 | -1.69E-46 |
| MS.gene059368 | MS.gene46942 | 0.820723 | 5.90E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene46942 | 0.825773 | 3.90E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene46942 | 0.839877 | 1.22E-57 | -1.69E-46 |
| MS.gene059536 | MS.gene46942 | 0.90319 | 4.48E-79 | -1.69E-46 |
| MS.gene059597 | MS.gene46942 | 0.841874 | 3.65E-58 | -1.69E-46 |
| MS.gene05959 | MS.gene46942 | 0.807445 | 5.04E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene46942 | 0.809215 | 2.11E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene46942 | 0.865794 | 4.56E-65 | -1.69E-46 |
| MS.gene059677 | MS.gene46942 | 0.800498 | 1.40E-48 | -1.69E-46 |
| MS.gene059688 | MS.gene46942 | 0.910026 | 2.97E-82 | -1.69E-46 |
| MS.gene059692 | MS.gene46942 | 0.897195 | 1.78E-76 | -1.69E-46 |
| MS.gene059695 | MS.gene46942 | 0.898886 | 3.42E-77 | -1.69E-46 |
| MS.gene059711 | MS.gene46942 | 0.860384 | 2.14E-63 | -1.69E-46 |
| MS.gene059718 | MS.gene46942 | 0.839012 | 2.04E-57 | -1.69E-46 |
| MS.gene059807 | MS.gene46942 | 0.863138 | 3.08E-64 | -1.69E-46 |
| MS.gene05984 | MS.gene46942 | 0.815629 | 8.38E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene46942 | 0.874539 | 6.24E-68 | -1.69E-46 |
| MS.gene059960 | MS.gene46942 | 0.867485 | 1.32E-65 | -1.69E-46 |
| MS.gene060193 | MS.gene46942 | 0.839546 | 1.49E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene46942 | 0.813186 | 2.91E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene46942 | 0.884541 | 1.76E-71 | -1.69E-46 |
| MS.gene060482 | MS.gene46942 | 0.819205 | 1.31E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene46942 | 0.912474 | 1.87E-83 | -1.69E-46 |
| MS.gene060818 | MS.gene46942 | 0.894875 | 1.63E-75 | -1.69E-46 |
| MS.gene060835 | MS.gene46942 | 0.860444 | 2.06E-63 | -1.69E-46 |
| MS.gene060837 | MS.gene46942 | 0.887416 | 1.46E-72 | -1.69E-46 |
| MS.gene06092 | MS.gene46942 | 0.848332 | 6.56E-60 | -1.69E-46 |
| MS.gene061041 | MS.gene46942 | 0.893675 | 5.04E-75 | -1.69E-46 |
| MS.gene061049 | MS.gene46942 | 0.837735 | 4.36E-57 | -1.69E-46 |
| MS.gene061051 | MS.gene46942 | -0.839256 | 1.77E-57 | -1.69E-46 |
| MS.gene061134 | MS.gene46942 | 0.823668 | 1.22E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene46942 | 0.80321 | 3.89E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene46942 | 0.841646 | 4.19E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene46942 | 0.883003 | 6.48E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46942.t1 | MTR_3g450510 | 98.481 | 395 | 6 | 0 | 1 | 395 | 1 | 395 | 0.0 | 807 |
| MS.gene46942.t1 | MTR_5g090780 | 79.648 | 398 | 68 | 4 | 1 | 395 | 1 | 388 | 0.0 | 648 |
| MS.gene46942.t1 | MTR_5g076620 | 73.669 | 357 | 85 | 2 | 37 | 388 | 77 | 429 | 0.0 | 540 |
| MS.gene46942.t1 | MTR_5g076620 | 73.290 | 307 | 73 | 2 | 37 | 338 | 77 | 379 | 1.42e-163 | 464 |
| MS.gene46942.t1 | MTR_3g083630 | 69.395 | 281 | 86 | 0 | 98 | 378 | 87 | 367 | 9.00e-153 | 437 |
| MS.gene46942.t1 | MTR_3g083650 | 61.972 | 71 | 27 | 0 | 124 | 194 | 1 | 71 | 6.18e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46942.t1 | AT5G17230 | 76.136 | 352 | 79 | 2 | 29 | 378 | 59 | 407 | 0.0 | 551 |
| MS.gene46942.t1 | AT5G17230 | 76.136 | 352 | 79 | 2 | 29 | 378 | 59 | 407 | 0.0 | 551 |
| MS.gene46942.t1 | AT5G17230 | 76.136 | 352 | 79 | 2 | 29 | 378 | 59 | 407 | 0.0 | 551 |
| MS.gene46942.t1 | AT5G17230 | 73.025 | 367 | 79 | 3 | 29 | 378 | 59 | 422 | 0.0 | 542 |
Find 87 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGTCTGGTGTTCTTCTT+TGG | 0.203427 | 3.2:-38024794 | MS.gene46942:CDS |
| TGTTCATCTTGTAGTCATTT+TGG | 0.206973 | 3.2:+38021769 | None:intergenic |
| CCTTCAATCATGTCTTTAAA+TGG | 0.223849 | 3.2:+38022655 | None:intergenic |
| AGAGAATGCCATTTCCTTAA+TGG | 0.264096 | 3.2:-38024754 | MS.gene46942:CDS |
| CTAATTAGACATACCGTAAA+TGG | 0.264788 | 3.2:+38023586 | None:intergenic |
| GAGAATGCCATTTCCTTAAT+GGG | 0.302605 | 3.2:-38024753 | MS.gene46942:CDS |
| CAGCAAGTAGATGGCCTGTT+TGG | 0.307680 | 3.2:-38021943 | MS.gene46942:CDS |
| TTATCACTTCCTGTTGCTCT+TGG | 0.315689 | 3.2:-38021821 | MS.gene46942:CDS |
| GATGCTCTCTGTTGAAGCTT+TGG | 0.337629 | 3.2:+38022510 | None:intergenic |
| CTTATGAGTGTTCCTGTAAT+GGG | 0.347887 | 3.2:-38022547 | MS.gene46942:CDS |
| GCCATTTCCTTAATGGGTCT+TGG | 0.351168 | 3.2:-38024747 | MS.gene46942:CDS |
| TGTGGTTCTATCCCCATTAC+AGG | 0.351831 | 3.2:+38022535 | None:intergenic |
| AGGAGGTTTAGACATTGTTC+TGG | 0.362139 | 3.2:-38024702 | MS.gene46942:CDS |
| TCCCATCTGTCCAAGGCCTT+TGG | 0.363807 | 3.2:+38023418 | None:intergenic |
| CATGAAATTGCGCCATTTGT+CGG | 0.363909 | 3.2:+38022033 | None:intergenic |
| GGGCATCTTTGCTGTTGTAT+AGG | 0.372606 | 3.2:-38021922 | MS.gene46942:CDS |
| CTATATTGCTACTATGTTGC+TGG | 0.386898 | 3.2:-38022580 | MS.gene46942:CDS |
| GATGTCTGGTGTTCTTCTTT+GGG | 0.389571 | 3.2:-38024793 | MS.gene46942:CDS |
| CAGCAACATAGTAGCAATAT+AGG | 0.392016 | 3.2:+38022581 | None:intergenic |
| AGCAAGTAGATGGCCTGTTT+GGG | 0.395898 | 3.2:-38021942 | MS.gene46942:CDS |
| TAACCTACCTGTATATCAAC+AGG | 0.395934 | 3.2:+38023316 | None:intergenic |
| AAAGCCATATGGGCCATTTA+CGG | 0.401396 | 3.2:-38023599 | MS.gene46942:intron |
| CTCTCCTCTGAGGATCTTGT+AGG | 0.415075 | 3.2:+38024642 | None:intergenic |
| GCTCTTGGAATAGCAACGTT+TGG | 0.415641 | 3.2:-38021806 | MS.gene46942:CDS |
| TTGGTGAAATCACCTTCAAT+AGG | 0.419066 | 3.2:+38024531 | None:intergenic |
| TCCAAGACCCATTAAGGAAA+TGG | 0.420248 | 3.2:+38024746 | None:intergenic |
| AGCTCAGTTCAGCAAGTAGA+TGG | 0.427080 | 3.2:-38021952 | MS.gene46942:CDS |
| GTACCTTCCGCAAGATGAAT+TGG | 0.429606 | 3.2:-38022101 | MS.gene46942:CDS |
| TGTTCTATTCCTAAGATGTC+TGG | 0.436560 | 3.2:-38024807 | None:intergenic |
| CCTTATGAGTGTTCCTGTAA+TGG | 0.441118 | 3.2:-38022548 | MS.gene46942:CDS |
| TACTATGTTGCTGGGACTGT+GGG | 0.445506 | 3.2:-38022571 | MS.gene46942:CDS |
| ACTATAATAACTTCACCAAA+CGG | 0.449049 | 3.2:-38021871 | MS.gene46942:CDS |
| CATACCGTAAATGGCCCATA+TGG | 0.458649 | 3.2:+38023595 | None:intergenic |
| AAAGTACCCTGTTGATATAC+AGG | 0.460407 | 3.2:-38023323 | MS.gene46942:intron |
| GTTCTTCTTTGGGTGAATTG+TGG | 0.464290 | 3.2:-38024783 | MS.gene46942:CDS |
| GGTGTGATGTGTGAAGCATT+AGG | 0.465088 | 3.2:+38023439 | None:intergenic |
| AAGAGAGAAGAAAAGCCATA+TGG | 0.465862 | 3.2:-38023610 | MS.gene46942:CDS |
| GTTGCTATTCCAAGAGCAAC+AGG | 0.466089 | 3.2:+38021812 | None:intergenic |
| AACAGCAAAGATGCCCAAAC+AGG | 0.470763 | 3.2:+38021929 | None:intergenic |
| ACACATCACACCAAAGGCCT+TGG | 0.473491 | 3.2:-38023428 | MS.gene46942:CDS |
| CTATAATAACTTCACCAAAC+GGG | 0.476146 | 3.2:-38021870 | MS.gene46942:CDS |
| TTGGATGATAAGCCTATTGA+AGG | 0.477265 | 3.2:-38024543 | MS.gene46942:CDS |
| TACAATGCTGCATTGGCACT+TGG | 0.478711 | 3.2:-38022487 | MS.gene46942:CDS |
| CACCAAAGGCCTTGGACAGA+TGG | 0.481447 | 3.2:-38023420 | MS.gene46942:CDS |
| CCATTTAAAGACATGATTGA+AGG | 0.482461 | 3.2:-38022655 | MS.gene46942:CDS |
| CTACTATGTTGCTGGGACTG+TGG | 0.486893 | 3.2:-38022572 | MS.gene46942:CDS |
| TATATTGCTACTATGTTGCT+GGG | 0.488882 | 3.2:-38022579 | MS.gene46942:CDS |
| GCAGCATCATACATATCATA+AGG | 0.497935 | 3.2:+38023364 | None:intergenic |
| TCTGTTGAAGCTTTGGATTG+TGG | 0.503008 | 3.2:+38022517 | None:intergenic |
| TTGAAGGTGATTTCACCAAT+GGG | 0.504638 | 3.2:-38024527 | MS.gene46942:CDS |
| ATTTCCTTAATGGGTCTTGG+AGG | 0.509366 | 3.2:-38024744 | MS.gene46942:CDS |
| CAGAAGAACAGATGAGTTAG+TGG | 0.511011 | 3.2:-38023467 | MS.gene46942:CDS |
| CCATTACAGGAACACTCATA+AGG | 0.511875 | 3.2:+38022548 | None:intergenic |
| CAAGATGAATTGGCACAAGC+TGG | 0.511937 | 3.2:-38022091 | MS.gene46942:CDS |
| AAGACATGATTGAAGGGATG+AGG | 0.513888 | 3.2:-38022648 | MS.gene46942:CDS |
| ATTGAAGGTGATTTCACCAA+TGG | 0.516585 | 3.2:-38024528 | MS.gene46942:CDS |
| CATGATTGAAGGGATGAGGC+TGG | 0.519563 | 3.2:-38022644 | MS.gene46942:CDS |
| TCTTTGTTCCCATCTGTCCA+AGG | 0.520607 | 3.2:+38023411 | None:intergenic |
| GAGGCAGAGTAACCGACAAA+TGG | 0.531514 | 3.2:-38022045 | MS.gene46942:CDS |
| ACCAAAGGCCTTGGACAGAT+GGG | 0.533995 | 3.2:-38023419 | MS.gene46942:CDS |
| CATTTAAAGACATGATTGAA+GGG | 0.534248 | 3.2:-38022654 | MS.gene46942:CDS |
| TTCACCAAACGGGCTTATGT+AGG | 0.535111 | 3.2:-38021860 | MS.gene46942:CDS |
| AGAGAGAAGAAAAGCCATAT+GGG | 0.536115 | 3.2:-38023609 | MS.gene46942:CDS |
| TACAAGATCCTCAGAGGAGA+GGG | 0.538242 | 3.2:-38024640 | MS.gene46942:CDS |
| GAGCATCTACAATGCTGCAT+TGG | 0.547623 | 3.2:-38022494 | MS.gene46942:CDS |
| CAAATGGCGCAATTTCATGA+AGG | 0.578152 | 3.2:-38022029 | MS.gene46942:CDS |
| GTGCCAATTCATCTTGCGGA+AGG | 0.588837 | 3.2:+38022098 | None:intergenic |
| TCCAACGTCTCTAAGTATGT+TGG | 0.590935 | 3.2:+38022447 | None:intergenic |
| AGAACTCAAAAGTTCCCCAT+TGG | 0.594991 | 3.2:+38024512 | None:intergenic |
| GCTTGTGCCAATTCATCTTG+CGG | 0.595244 | 3.2:+38022094 | None:intergenic |
| AGGGTCAAATAAAGAGAGCA+AGG | 0.603555 | 3.2:-38022009 | MS.gene46942:CDS |
| ACCAACATACTTAGAGACGT+TGG | 0.613097 | 3.2:-38022448 | MS.gene46942:CDS |
| AGAACAGATGAGTTAGTGGA+TGG | 0.619649 | 3.2:-38023463 | MS.gene46942:CDS |
| AAATGGCGCAATTTCATGAA+GGG | 0.620886 | 3.2:-38022028 | MS.gene46942:CDS |
| AGAGGAGAGGGTGTATGAAG+TGG | 0.622701 | 3.2:-38024628 | MS.gene46942:CDS |
| GAAAAGATGTAAGAACTCAA+AGG | 0.626190 | 3.2:-38024722 | MS.gene46942:CDS |
| TTATGAGTGTTCCTGTAATG+GGG | 0.627271 | 3.2:-38022546 | MS.gene46942:CDS |
| TGCTTCACACATCACACCAA+AGG | 0.631660 | 3.2:-38023434 | MS.gene46942:CDS |
| AGTTCTGCTTATGATAGATG+TGG | 0.632966 | 3.2:-38024495 | MS.gene46942:CDS |
| GAAGCAAGCAGCCCTAGTGA+AGG | 0.638244 | 3.2:-38024601 | MS.gene46942:CDS |
| CTACAAGATCCTCAGAGGAG+AGG | 0.648794 | 3.2:-38024641 | MS.gene46942:CDS |
| TCGTCTTATAGTGCTAGAAG+AGG | 0.652452 | 3.2:-38022130 | MS.gene46942:intron |
| TTCATACACCCTCTCCTCTG+AGG | 0.670132 | 3.2:+38024632 | None:intergenic |
| AAGATGTAAGAACTCAAAGG+AGG | 0.687423 | 3.2:-38024719 | MS.gene46942:CDS |
| TGAAGGTGATTTCACCAATG+GGG | 0.696835 | 3.2:-38024526 | MS.gene46942:CDS |
| AACCTACCTGTATATCAACA+GGG | 0.701397 | 3.2:+38023317 | None:intergenic |
| TGAACCTACAAGATCCTCAG+AGG | 0.724557 | 3.2:-38024646 | MS.gene46942:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAACCATATTTATTA+TGG | - | chr3.2:38024330-38024349 | MS.gene46942:intron | 10.0% |
| !!! | TATAATTTTTGAAGGTATAA+AGG | + | chr3.2:38023316-38023335 | None:intergenic | 15.0% |
| !!! | TTATAATTTTGTCAAAATCA+CGG | + | chr3.2:38022638-38022657 | None:intergenic | 15.0% |
| !!! | TTGATAACATGAATATTTTT+TGG | - | chr3.2:38022179-38022198 | MS.gene46942:intron | 15.0% |
| !! | AAATTTCACATTTCAACTTT+GGG | + | chr3.2:38023291-38023310 | None:intergenic | 20.0% |
| !! | AATTTAGACGATATATCATA+GGG | - | chr3.2:38022340-38022359 | MS.gene46942:intron | 20.0% |
| !! | ACCATCTTAAAATTTGTATT+TGG | + | chr3.2:38023602-38023621 | None:intergenic | 20.0% |
| !! | AGAAAAGATATTAAAAAGAG+AGG | - | chr3.2:38021991-38022010 | MS.gene46942:CDS | 20.0% |
| !! | GAATATGTTTGCTTAAAATT+AGG | - | chr3.2:38023386-38023405 | MS.gene46942:CDS | 20.0% |
| !! | TAAATTTCACATTTCAACTT+TGG | + | chr3.2:38023292-38023311 | None:intergenic | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | - | chr3.2:38024297-38024316 | MS.gene46942:intron | 20.0% |
| !!! | TATGCAAAGACATTTTATTT+AGG | - | chr3.2:38022108-38022127 | MS.gene46942:CDS | 20.0% |
| !!! | TTTGAAGTTTTGATCAATAA+AGG | + | chr3.2:38022910-38022929 | None:intergenic | 20.0% |
| ! | ACCATATTTATTATGGATGA+TGG | - | chr3.2:38024337-38024356 | MS.gene46942:intron | 25.0% |
| ! | ACTATAATAACTTCACCAAA+CGG | - | chr3.2:38024693-38024712 | MS.gene46942:CDS | 25.0% |
| ! | ATATTGTAAGTTTGAATTGG+CGG | + | chr3.2:38022825-38022844 | None:intergenic | 25.0% |
| ! | ATGCGAAAAATCTAAACAAA+AGG | + | chr3.2:38022147-38022166 | None:intergenic | 25.0% |
| ! | ATGCTAATTAATAGTTCAGT+CGG | + | chr3.2:38022458-38022477 | None:intergenic | 25.0% |
| ! | CATTAATTAGAAATCGAACT+TGG | - | chr3.2:38024196-38024215 | MS.gene46942:intron | 25.0% |
| ! | CATTTAAAGACATGATTGAA+GGG | - | chr3.2:38023910-38023929 | MS.gene46942:intron | 25.0% |
| ! | CTGTAATAATACATAAAGAG+TGG | + | chr3.2:38023070-38023089 | None:intergenic | 25.0% |
| ! | CTTCAAAATTTCTGTTACAA+AGG | - | chr3.2:38023006-38023025 | MS.gene46942:intron | 25.0% |
| ! | CTTTATGTATTATTACAGTG+TGG | - | chr3.2:38023072-38023091 | MS.gene46942:intron | 25.0% |
| ! | GAATTTAGACGATATATCAT+AGG | - | chr3.2:38022339-38022358 | MS.gene46942:intron | 25.0% |
| ! | GTAAATATGACTTGAAAATG+TGG | - | chr3.2:38023732-38023751 | MS.gene46942:intron | 25.0% |
| ! | TAAAAAGAGAGGTTTGAATT+TGG | - | chr3.2:38022002-38022021 | MS.gene46942:CDS | 25.0% |
| ! | TGCGAAAAATCTAAACAAAA+GGG | + | chr3.2:38022146-38022165 | None:intergenic | 25.0% |
| ! | TTTGCGAATATGTTACATAA+CGG | - | chr3.2:38022692-38022711 | MS.gene46942:intron | 25.0% |
| !! | AAATTGATTTCATCTCTCTA+AGG | - | chr3.2:38023411-38023430 | MS.gene46942:CDS | 25.0% |
| !! | AAGACATCGTAAACTATTTT+TGG | + | chr3.2:38022512-38022531 | None:intergenic | 25.0% |
| !! | AGAGACTATCTAAAATTTGA+TGG | - | chr3.2:38023625-38023644 | MS.gene46942:CDS | 25.0% |
| !! | CAACTAGCTATAATTTTTGA+AGG | + | chr3.2:38023324-38023343 | None:intergenic | 25.0% |
| !! | GAGACTATCTAAAATTTGAT+GGG | - | chr3.2:38023626-38023645 | MS.gene46942:CDS | 25.0% |
| !! | TATTGTATCTTGATTTTCTC+AGG | + | chr3.2:38023947-38023966 | None:intergenic | 25.0% |
| !! | TTGTCATTTAAGCAAATAGA+AGG | - | chr3.2:38023826-38023845 | MS.gene46942:intron | 25.0% |
| !!! | AGATTAACTGATGTTTTTGA+AGG | - | chr3.2:38023173-38023192 | MS.gene46942:intron | 25.0% |
| !!! | ATATGTTACATAACGGATTT+AGG | - | chr3.2:38022699-38022718 | MS.gene46942:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr3.2:38024296-38024315 | MS.gene46942:intron | 25.0% |
| !!! | CTAATTTTTTCTTGTTTCCA+TGG | - | chr3.2:38024411-38024430 | MS.gene46942:intron | 25.0% |
| !!! | GCCAAATACAAATTTTAAGA+TGG | - | chr3.2:38023598-38023617 | MS.gene46942:intron | 25.0% |
| !!! | TATGTTACATAACGGATTTA+GGG | - | chr3.2:38022700-38022719 | MS.gene46942:intron | 25.0% |
| !!! | TCATTTTGGTTAACTTTTGT+GGG | + | chr3.2:38024784-38024803 | None:intergenic | 25.0% |
| ATGAAATTTGAACCGATATG+TGG | + | chr3.2:38022280-38022299 | None:intergenic | 30.0% | |
| CCATTTAAAGACATGATTGA+AGG | - | chr3.2:38023909-38023928 | MS.gene46942:intron | 30.0% | |
| CCTTCAATCATGTCTTTAAA+TGG | + | chr3.2:38023912-38023931 | None:intergenic | 30.0% | |
| CTAATTAGACATACCGTAAA+TGG | + | chr3.2:38022981-38023000 | None:intergenic | 30.0% | |
| CTATAATAACTTCACCAAAC+GGG | - | chr3.2:38024694-38024713 | MS.gene46942:CDS | 30.0% | |
| CTTGTATGACACACATATAA+GGG | - | chr3.2:38023438-38023457 | MS.gene46942:CDS | 30.0% | |
| GAAAAATGTCATCATCTGAT+AGG | + | chr3.2:38024499-38024518 | None:intergenic | 30.0% | |
| GAAAAGATGTAAGAACTCAA+AGG | - | chr3.2:38021842-38021861 | MS.gene46942:CDS | 30.0% | |
| GACTGAACTATTAATTAGCA+TGG | - | chr3.2:38022457-38022476 | MS.gene46942:CDS | 30.0% | |
| GATCAATAAAGGACGAATAA+AGG | + | chr3.2:38022899-38022918 | None:intergenic | 30.0% | |
| GCCAATTCAAACTTACAATA+TGG | - | chr3.2:38022824-38022843 | MS.gene46942:intron | 30.0% | |
| GCCATATTGTAAGTTTGAAT+TGG | + | chr3.2:38022828-38022847 | None:intergenic | 30.0% | |
| GCCATCATCCATAATAAATA+TGG | + | chr3.2:38024341-38024360 | None:intergenic | 30.0% | |
| GTAAGCTATTGTCAAAAACA+CGG | - | chr3.2:38022773-38022792 | MS.gene46942:intron | 30.0% | |
| TAATTAATAGTTCAGTCGGA+AGG | + | chr3.2:38022454-38022473 | None:intergenic | 30.0% | |
| TATATTGCTACTATGTTGCT+GGG | - | chr3.2:38023985-38024004 | MS.gene46942:intron | 30.0% | |
| TCTCTATCGAACTACTTATA+TGG | + | chr3.2:38022601-38022620 | None:intergenic | 30.0% | |
| TCTTAAAACGTGTCATAAGT+GGG | - | chr3.2:38023532-38023551 | MS.gene46942:intron | 30.0% | |
| TGATCAAAACTTCAAATCTC+AGG | - | chr3.2:38022914-38022933 | MS.gene46942:intron | 30.0% | |
| ! | AACTTACAAGCTAGTTGTTT+TGG | - | chr3.2:38023566-38023585 | MS.gene46942:intron | 30.0% |
| ! | ACAACTAGCTTGTAAGTTTA+TGG | + | chr3.2:38023564-38023583 | None:intergenic | 30.0% |
| ! | ATGTAAAGAAGCTTTAGTCA+TGG | - | chr3.2:38022234-38022253 | MS.gene46942:intron | 30.0% |
| ! | ATTTGAGTTCAAATCCTAAC+TGG | - | chr3.2:38022402-38022421 | MS.gene46942:intron | 30.0% |
| ! | CATACTTTTATCTTGCCTTT+TGG | - | chr3.2:38022297-38022316 | MS.gene46942:intron | 30.0% |
| ! | TTTAGAGCTTCAACAAAACA+CGG | + | chr3.2:38022751-38022770 | None:intergenic | 30.0% |
| ! | TTTTCTTTGTTCCTTCACTA+GGG | + | chr3.2:38021977-38021996 | None:intergenic | 30.0% |
| !!! | GTCATTTTGGTTAACTTTTG+TGG | + | chr3.2:38024785-38024804 | None:intergenic | 30.0% |
| !!! | GTGAGTTTTGAAGAAAACAT+GGG | + | chr3.2:38024365-38024384 | None:intergenic | 30.0% |
| !!! | TGTGAGTTTTGAAGAAAACA+TGG | + | chr3.2:38024366-38024385 | None:intergenic | 30.0% |
| AAATGGCGCAATTTCATGAA+GGG | - | chr3.2:38024536-38024555 | MS.gene46942:CDS | 35.0% | |
| AACCTACCTGTATATCAACA+GGG | + | chr3.2:38023250-38023269 | None:intergenic | 35.0% | |
| AAGAGAGAAGAAAAGCCATA+TGG | - | chr3.2:38022954-38022973 | MS.gene46942:intron | 35.0% | |
| AAGATGTAAGAACTCAAAGG+AGG | - | chr3.2:38021845-38021864 | MS.gene46942:CDS | 35.0% | |
| ACCTTCATTTGTAGAAGAGA+TGG | + | chr3.2:38022484-38022503 | None:intergenic | 35.0% | |
| AGAACTCAAACTAGTCAATG+AGG | - | chr3.2:38023364-38023383 | MS.gene46942:CDS | 35.0% | |
| AGACATGTGGTTACAATTAG+AGG | - | chr3.2:38024265-38024284 | MS.gene46942:intron | 35.0% | |
| AGAGAGAAGAAAAGCCATAT+GGG | - | chr3.2:38022955-38022974 | MS.gene46942:intron | 35.0% | |
| AGTTCTGCTTATGATAGATG+TGG | - | chr3.2:38022069-38022088 | MS.gene46942:CDS | 35.0% | |
| ATCCTAACTGGAACAATCAT+CGG | - | chr3.2:38022414-38022433 | MS.gene46942:intron | 35.0% | |
| ATTGAAGGTGATTTCACCAA+TGG | - | chr3.2:38022036-38022055 | MS.gene46942:CDS | 35.0% | |
| CAGCAACATAGTAGCAATAT+AGG | + | chr3.2:38023986-38024005 | None:intergenic | 35.0% | |
| CTATATTGCTACTATGTTGC+TGG | - | chr3.2:38023984-38024003 | MS.gene46942:intron | 35.0% | |
| CTCAAGAAGTAACCACATAT+CGG | - | chr3.2:38022265-38022284 | MS.gene46942:intron | 35.0% | |
| CTTAACTTTGTACCGTAATG+TGG | - | chr3.2:38022529-38022548 | MS.gene46942:CDS | 35.0% | |
| CTTATGAGTGTTCCTGTAAT+GGG | - | chr3.2:38024017-38024036 | MS.gene46942:intron | 35.0% | |
| GACATGTGGTTACAATTAGA+GGG | - | chr3.2:38024266-38024285 | MS.gene46942:intron | 35.0% | |
| GCAGCATCATACATATCATA+AGG | + | chr3.2:38023203-38023222 | None:intergenic | 35.0% | |
| GCTTGTATGACACACATATA+AGG | - | chr3.2:38023437-38023456 | MS.gene46942:CDS | 35.0% | |
| GTCTTAAAACGTGTCATAAG+TGG | - | chr3.2:38023531-38023550 | MS.gene46942:intron | 35.0% | |
| TAAAACGATTGACGAGCAAA+AGG | + | chr3.2:38022379-38022398 | None:intergenic | 35.0% | |
| TAACCTACCTGTATATCAAC+AGG | + | chr3.2:38023251-38023270 | None:intergenic | 35.0% | |
| TCCATCTCTTCTACAAATGA+AGG | - | chr3.2:38022480-38022499 | MS.gene46942:CDS | 35.0% | |
| TTACAAAGGCTTCTCTAATG+TGG | - | chr3.2:38023020-38023039 | MS.gene46942:intron | 35.0% | |
| TTATGAGTGTTCCTGTAATG+GGG | - | chr3.2:38024018-38024037 | MS.gene46942:intron | 35.0% | |
| TTCCACTAGAATCAACCAAA+AGG | + | chr3.2:38022315-38022334 | None:intergenic | 35.0% | |
| TTGAAGGTGATTTCACCAAT+GGG | - | chr3.2:38022037-38022056 | MS.gene46942:CDS | 35.0% | |
| TTGGATGATAAGCCTATTGA+AGG | - | chr3.2:38022021-38022040 | MS.gene46942:CDS | 35.0% | |
| TTGGTGAAATCACCTTCAAT+AGG | + | chr3.2:38022036-38022055 | None:intergenic | 35.0% | |
| ! | AAAAATGACTTGCAAGACGA+AGG | + | chr3.2:38023771-38023790 | None:intergenic | 35.0% |
| ! | AAAGTACCCTGTTGATATAC+AGG | - | chr3.2:38023241-38023260 | MS.gene46942:intron | 35.0% |
| ! | AGAGAATGCCATTTCCTTAA+TGG | - | chr3.2:38021810-38021829 | MS.gene46942:CDS | 35.0% |
| ! | ATTTCAAGTGTTCGATGTGA+TGG | - | chr3.2:38023679-38023698 | MS.gene46942:intron | 35.0% |
| ! | CACTAGGATATTCTTTTGGT+AGG | + | chr3.2:38022565-38022584 | None:intergenic | 35.0% |
| ! | CTTTTCTTTGTTCCTTCACT+AGG | + | chr3.2:38021978-38021997 | None:intergenic | 35.0% |
| ! | GAGAATGCCATTTCCTTAAT+GGG | - | chr3.2:38021811-38021830 | MS.gene46942:CDS | 35.0% |
| ! | TCAGATGATGACATTTTTCG+AGG | - | chr3.2:38024500-38024519 | MS.gene46942:CDS | 35.0% |
| !! | GTGTCACTAGGATATTCTTT+TGG | + | chr3.2:38022569-38022588 | None:intergenic | 35.0% |
| !!! | AGCAAGGATGTTTTTTGATG+AGG | - | chr3.2:38024571-38024590 | MS.gene46942:CDS | 35.0% |
| !!! | CTAGTTGTTTTGGCTGATTT+AGG | - | chr3.2:38023576-38023595 | MS.gene46942:intron | 35.0% |
| !!! | TTTTTTGATGAGGCAGAGAA+GGG | - | chr3.2:38024581-38024600 | MS.gene46942:CDS | 35.0% |
| AAAGCCATATGGGCCATTTA+CGG | - | chr3.2:38022965-38022984 | MS.gene46942:intron | 40.0% | |
| AAGACATGATTGAAGGGATG+AGG | - | chr3.2:38023916-38023935 | MS.gene46942:intron | 40.0% | |
| ACATTTCAACTTTGGGCATG+TGG | + | chr3.2:38023284-38023303 | None:intergenic | 40.0% | |
| ACCAACATACTTAGAGACGT+TGG | - | chr3.2:38024116-38024135 | MS.gene46942:intron | 40.0% | |
| AGAACAGATGAGTTAGTGGA+TGG | - | chr3.2:38023101-38023120 | MS.gene46942:intron | 40.0% | |
| AGAACTCAAAAGTTCCCCAT+TGG | + | chr3.2:38022055-38022074 | None:intergenic | 40.0% | |
| AGGAGGTTTAGACATTGTTC+TGG | - | chr3.2:38021862-38021881 | MS.gene46942:CDS | 40.0% | |
| AGGGTCAAATAAAGAGAGCA+AGG | - | chr3.2:38024555-38024574 | MS.gene46942:CDS | 40.0% | |
| CAAATGGCGCAATTTCATGA+AGG | - | chr3.2:38024535-38024554 | MS.gene46942:CDS | 40.0% | |
| CACGCGTGATTATGTTAAAC+TGG | - | chr3.2:38022799-38022818 | MS.gene46942:intron | 40.0% | |
| CAGAAGAACAGATGAGTTAG+TGG | - | chr3.2:38023097-38023116 | MS.gene46942:intron | 40.0% | |
| CATGAAATTGCGCCATTTGT+CGG | + | chr3.2:38024534-38024553 | None:intergenic | 40.0% | |
| CCATTACAGGAACACTCATA+AGG | + | chr3.2:38024019-38024038 | None:intergenic | 40.0% | |
| CCTTATGAGTGTTCCTGTAA+TGG | - | chr3.2:38024016-38024035 | MS.gene46942:intron | 40.0% | |
| CTGAAATGTAACCTGCAAGT+GGG | + | chr3.2:38023659-38023678 | None:intergenic | 40.0% | |
| GAGGGACTAAAACGAAAAGT+TGG | - | chr3.2:38024284-38024303 | MS.gene46942:intron | 40.0% | |
| GGAAACTTGAGACCACATTA+CGG | + | chr3.2:38022544-38022563 | None:intergenic | 40.0% | |
| GTATGACACACATATAAGGG+TGG | - | chr3.2:38023441-38023460 | MS.gene46942:CDS | 40.0% | |
| GTTCTTCTTTGGGTGAATTG+TGG | - | chr3.2:38021781-38021800 | MS.gene46942:CDS | 40.0% | |
| TACCCTGTTGATATACAGGT+AGG | - | chr3.2:38023245-38023264 | MS.gene46942:intron | 40.0% | |
| TCCAACGTCTCTAAGTATGT+TGG | + | chr3.2:38024120-38024139 | None:intergenic | 40.0% | |
| TCCAAGACCCATTAAGGAAA+TGG | + | chr3.2:38021821-38021840 | None:intergenic | 40.0% | |
| TCGTCTTATAGTGCTAGAAG+AGG | - | chr3.2:38024434-38024453 | MS.gene46942:intron | 40.0% | |
| TGAAGGTGATTTCACCAATG+GGG | - | chr3.2:38022038-38022057 | MS.gene46942:CDS | 40.0% | |
| TTATCACTTCCTGTTGCTCT+TGG | - | chr3.2:38024743-38024762 | MS.gene46942:CDS | 40.0% | |
| ! | ATTTCCTTAATGGGTCTTGG+AGG | - | chr3.2:38021820-38021839 | MS.gene46942:CDS | 40.0% |
| ! | TCTGAAATGTAACCTGCAAG+TGG | + | chr3.2:38023660-38023679 | None:intergenic | 40.0% |
| ! | TGGATGATTGTAGTGTCACT+AGG | + | chr3.2:38022581-38022600 | None:intergenic | 40.0% |
| ! | TTTTCCTACATAAGCCCGTT+TGG | + | chr3.2:38024711-38024730 | None:intergenic | 40.0% |
| ! | TTTTCCTCCAAGACCCATTA+AGG | + | chr3.2:38021827-38021846 | None:intergenic | 40.0% |
| !! | TCTGTTGAAGCTTTGGATTG+TGG | + | chr3.2:38024050-38024069 | None:intergenic | 40.0% |
| !! | TGCCTTTTGGTTGATTCTAG+TGG | - | chr3.2:38022310-38022329 | MS.gene46942:intron | 40.0% |
| !!! | GTTTTTTGATGAGGCAGAGA+AGG | - | chr3.2:38024580-38024599 | MS.gene46942:CDS | 40.0% |
| AACAGCAAAGATGCCCAAAC+AGG | + | chr3.2:38024638-38024657 | None:intergenic | 45.0% | |
| AAGCACTTGTGCTAGACATG+TGG | - | chr3.2:38024252-38024271 | MS.gene46942:intron | 45.0% | |
| ACATGTCTAGCACAAGTGCT+TGG | + | chr3.2:38024253-38024272 | None:intergenic | 45.0% | |
| AGAGTGGTCAGTTTCTACTG+AGG | + | chr3.2:38023054-38023073 | None:intergenic | 45.0% | |
| AGCAAGTAGATGGCCTGTTT+GGG | - | chr3.2:38024622-38024641 | MS.gene46942:CDS | 45.0% | |
| AGCTCAGTTCAGCAAGTAGA+TGG | - | chr3.2:38024612-38024631 | MS.gene46942:CDS | 45.0% | |
| AGTGCTTGGTATGGAAAGTG+TGG | + | chr3.2:38024239-38024258 | None:intergenic | 45.0% | |
| CAAGATGAATTGGCACAAGC+TGG | - | chr3.2:38024473-38024492 | MS.gene46942:CDS | 45.0% | |
| CATACCGTAAATGGCCCATA+TGG | + | chr3.2:38022972-38022991 | None:intergenic | 45.0% | |
| CTAGCACTATAAGACGACCA+TGG | + | chr3.2:38024431-38024450 | None:intergenic | 45.0% | |
| GACCGATGATTGTTCCAGTT+AGG | + | chr3.2:38022419-38022438 | None:intergenic | 45.0% | |
| GAGCATCTACAATGCTGCAT+TGG | - | chr3.2:38024070-38024089 | MS.gene46942:intron | 45.0% | |
| GATGCTCTCTGTTGAAGCTT+TGG | + | chr3.2:38024057-38024076 | None:intergenic | 45.0% | |
| GCTCTTGGAATAGCAACGTT+TGG | - | chr3.2:38024758-38024777 | MS.gene46942:CDS | 45.0% | |
| GCTTGTGCCAATTCATCTTG+CGG | + | chr3.2:38024473-38024492 | None:intergenic | 45.0% | |
| GTACCTTCCGCAAGATGAAT+TGG | - | chr3.2:38024463-38024482 | MS.gene46942:CDS | 45.0% | |
| TACAAGATCCTCAGAGGAGA+GGG | - | chr3.2:38021924-38021943 | MS.gene46942:CDS | 45.0% | |
| TACTATGTTGCTGGGACTGT+GGG | - | chr3.2:38023993-38024012 | MS.gene46942:intron | 45.0% | |
| TCTAGCACAAGTGCTTGGTA+TGG | + | chr3.2:38024248-38024267 | None:intergenic | 45.0% | |
| TCTTTGTTCCCATCTGTCCA+AGG | + | chr3.2:38023156-38023175 | None:intergenic | 45.0% | |
| TGAACCTACAAGATCCTCAG+AGG | - | chr3.2:38021918-38021937 | MS.gene46942:CDS | 45.0% | |
| TGCTTCACACATCACACCAA+AGG | - | chr3.2:38023130-38023149 | MS.gene46942:intron | 45.0% | |
| ! | GCCATTTCCTTAATGGGTCT+TGG | - | chr3.2:38021817-38021836 | MS.gene46942:CDS | 45.0% |
| ! | GGCTTCTCTAATGTGGATTG+TGG | - | chr3.2:38023027-38023046 | MS.gene46942:intron | 45.0% |
| ! | GGTGTGATGTGTGAAGCATT+AGG | + | chr3.2:38023128-38023147 | None:intergenic | 45.0% |
| ! | GTTCGATGTGATGGAGTGTA+AGG | - | chr3.2:38023688-38023707 | MS.gene46942:intron | 45.0% |
| ! | GTTGCTATTCCAAGAGCAAC+AGG | + | chr3.2:38024755-38024774 | None:intergenic | 45.0% |
| ! | TACAATGCTGCATTGGCACT+TGG | - | chr3.2:38024077-38024096 | MS.gene46942:intron | 45.0% |
| ! | TGTGGTTCTATCCCCATTAC+AGG | + | chr3.2:38024032-38024051 | None:intergenic | 45.0% |
| ! | TTCACCAAACGGGCTTATGT+AGG | - | chr3.2:38024704-38024723 | MS.gene46942:CDS | 45.0% |
| !! | GGGCATCTTTGCTGTTGTAT+AGG | - | chr3.2:38024642-38024661 | MS.gene46942:CDS | 45.0% |
| ACACATCACACCAAAGGCCT+TGG | - | chr3.2:38023136-38023155 | MS.gene46942:intron | 50.0% | |
| ACCAAAGGCCTTGGACAGAT+GGG | - | chr3.2:38023145-38023164 | MS.gene46942:intron | 50.0% | |
| CAGCAAGTAGATGGCCTGTT+TGG | - | chr3.2:38024621-38024640 | MS.gene46942:CDS | 50.0% | |
| CATGATTGAAGGGATGAGGC+TGG | - | chr3.2:38023920-38023939 | MS.gene46942:intron | 50.0% | |
| CTACAAGATCCTCAGAGGAG+AGG | - | chr3.2:38021923-38021942 | MS.gene46942:CDS | 50.0% | |
| CTACTATGTTGCTGGGACTG+TGG | - | chr3.2:38023992-38024011 | MS.gene46942:intron | 50.0% | |
| GAGGCAGAGTAACCGACAAA+TGG | - | chr3.2:38024519-38024538 | MS.gene46942:CDS | 50.0% | |
| GTGCCAATTCATCTTGCGGA+AGG | + | chr3.2:38024469-38024488 | None:intergenic | 50.0% | |
| TTCATACACCCTCTCCTCTG+AGG | + | chr3.2:38021935-38021954 | None:intergenic | 50.0% | |
| ! | AGAGGAGAGGGTGTATGAAG+TGG | - | chr3.2:38021936-38021955 | MS.gene46942:CDS | 50.0% |
| ! | CTCTCCTCTGAGGATCTTGT+AGG | + | chr3.2:38021925-38021944 | None:intergenic | 50.0% |
| CACCAAAGGCCTTGGACAGA+TGG | - | chr3.2:38023144-38023163 | MS.gene46942:intron | 55.0% | |
| GAAGCAAGCAGCCCTAGTGA+AGG | - | chr3.2:38021963-38021982 | MS.gene46942:CDS | 55.0% | |
| TCCCATCTGTCCAAGGCCTT+TGG | + | chr3.2:38023149-38023168 | None:intergenic | 55.0% | |
| TGGGACTCACACCCACTTGC+AGG | - | chr3.2:38023645-38023664 | MS.gene46942:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 38021772 | 38024814 | 38021772 | ID=MS.gene46942 |
| chr3.2 | mRNA | 38021772 | 38024814 | 38021772 | ID=MS.gene46942.t1;Parent=MS.gene46942 |
| chr3.2 | exon | 38024457 | 38024814 | 38024457 | ID=MS.gene46942.t1.exon1;Parent=MS.gene46942.t1 |
| chr3.2 | CDS | 38024457 | 38024814 | 38024457 | ID=cds.MS.gene46942.t1;Parent=MS.gene46942.t1 |
| chr3.2 | exon | 38023600 | 38023650 | 38023600 | ID=MS.gene46942.t1.exon2;Parent=MS.gene46942.t1 |
| chr3.2 | CDS | 38023600 | 38023650 | 38023600 | ID=cds.MS.gene46942.t1;Parent=MS.gene46942.t1 |
| chr3.2 | exon | 38023324 | 38023496 | 38023324 | ID=MS.gene46942.t1.exon3;Parent=MS.gene46942.t1 |
| chr3.2 | CDS | 38023324 | 38023496 | 38023324 | ID=cds.MS.gene46942.t1;Parent=MS.gene46942.t1 |
| chr3.2 | exon | 38022442 | 38022677 | 38022442 | ID=MS.gene46942.t1.exon4;Parent=MS.gene46942.t1 |
| chr3.2 | CDS | 38022442 | 38022677 | 38022442 | ID=cds.MS.gene46942.t1;Parent=MS.gene46942.t1 |
| chr3.2 | exon | 38021772 | 38022141 | 38021772 | ID=MS.gene46942.t1.exon5;Parent=MS.gene46942.t1 |
| chr3.2 | CDS | 38021772 | 38022141 | 38021772 | ID=cds.MS.gene46942.t1;Parent=MS.gene46942.t1 |
| Gene Sequence |
| Protein sequence |
