Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22206.t1 | RHN66809.1 | 98.5 | 395 | 6 | 0 | 1 | 395 | 1 | 395 | 5.90E-226 | 793.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22206.t1 | Q9SSU8 | 76.1 | 351 | 75 | 2 | 45 | 386 | 44 | 394 | 9.4e-156 | 551.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22206.t1 | A0A396IMG0 | 98.5 | 395 | 6 | 0 | 1 | 395 | 1 | 395 | 4.2e-226 | 793.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene22206 | 0.839226 | 1.80E-57 | -1.69E-46 |
MS.gene049217 | MS.gene22206 | 0.828664 | 7.93E-55 | -1.69E-46 |
MS.gene049222 | MS.gene22206 | 0.80973 | 1.64E-50 | -1.69E-46 |
MS.gene049285 | MS.gene22206 | 0.802357 | 5.83E-49 | -1.69E-46 |
MS.gene049351 | MS.gene22206 | 0.851688 | 7.54E-61 | -1.69E-46 |
MS.gene049356 | MS.gene22206 | 0.855166 | 7.57E-62 | -1.69E-46 |
MS.gene049369 | MS.gene22206 | 0.875046 | 4.20E-68 | -1.69E-46 |
MS.gene049396 | MS.gene22206 | 0.834001 | 3.86E-56 | -1.69E-46 |
MS.gene049425 | MS.gene22206 | -0.800466 | 1.42E-48 | -1.69E-46 |
MS.gene049427 | MS.gene22206 | 0.841852 | 3.69E-58 | -1.69E-46 |
MS.gene049488 | MS.gene22206 | 0.802373 | 5.79E-49 | -1.69E-46 |
MS.gene049491 | MS.gene22206 | 0.840043 | 1.10E-57 | -1.69E-46 |
MS.gene049609 | MS.gene22206 | 0.864411 | 1.24E-64 | -1.69E-46 |
MS.gene049614 | MS.gene22206 | 0.809319 | 2.01E-50 | -1.69E-46 |
MS.gene049661 | MS.gene22206 | 0.863626 | 2.18E-64 | -1.69E-46 |
MS.gene049662 | MS.gene22206 | 0.853086 | 3.01E-61 | -1.69E-46 |
MS.gene049805 | MS.gene22206 | 0.877161 | 7.84E-69 | -1.69E-46 |
MS.gene050076 | MS.gene22206 | 0.814567 | 1.44E-51 | -1.69E-46 |
MS.gene050301 | MS.gene22206 | 0.841219 | 5.43E-58 | -1.69E-46 |
MS.gene050397 | MS.gene22206 | 0.847454 | 1.14E-59 | -1.69E-46 |
MS.gene050432 | MS.gene22206 | 0.83357 | 4.94E-56 | -1.69E-46 |
MS.gene050464 | MS.gene22206 | 0.820017 | 8.56E-53 | -1.69E-46 |
MS.gene050520 | MS.gene22206 | 0.806665 | 7.37E-50 | -1.69E-46 |
MS.gene050529 | MS.gene22206 | 0.819588 | 1.07E-52 | -1.69E-46 |
MS.gene05053 | MS.gene22206 | 0.82473 | 6.89E-54 | -1.69E-46 |
MS.gene050593 | MS.gene22206 | 0.878521 | 2.63E-69 | -1.69E-46 |
MS.gene050670 | MS.gene22206 | 0.895986 | 5.68E-76 | -1.69E-46 |
MS.gene050686 | MS.gene22206 | 0.82544 | 4.68E-54 | -1.69E-46 |
MS.gene050747 | MS.gene22206 | 0.823759 | 1.17E-53 | -1.69E-46 |
MS.gene050767 | MS.gene22206 | 0.846716 | 1.82E-59 | -1.69E-46 |
MS.gene050770 | MS.gene22206 | 0.85067 | 1.46E-60 | -1.69E-46 |
MS.gene050772 | MS.gene22206 | 0.881054 | 3.30E-70 | -1.69E-46 |
MS.gene050950 | MS.gene22206 | 0.818987 | 1.47E-52 | -1.69E-46 |
MS.gene050971 | MS.gene22206 | 0.833822 | 4.28E-56 | -1.69E-46 |
MS.gene05101 | MS.gene22206 | 0.835809 | 1.35E-56 | -1.69E-46 |
MS.gene05105 | MS.gene22206 | 0.918957 | 8.19E-87 | -1.69E-46 |
MS.gene051228 | MS.gene22206 | 0.813897 | 2.03E-51 | -1.69E-46 |
MS.gene051255 | MS.gene22206 | 0.81671 | 4.81E-52 | -1.69E-46 |
MS.gene051360 | MS.gene22206 | 0.812599 | 3.91E-51 | -1.69E-46 |
MS.gene051387 | MS.gene22206 | 0.873591 | 1.31E-67 | -1.69E-46 |
MS.gene051525 | MS.gene22206 | 0.828785 | 7.41E-55 | -1.69E-46 |
MS.gene051605 | MS.gene22206 | 0.828604 | 8.20E-55 | -1.69E-46 |
MS.gene051666 | MS.gene22206 | 0.84355 | 1.31E-58 | -1.69E-46 |
MS.gene051692 | MS.gene22206 | 0.850803 | 1.34E-60 | -1.69E-46 |
MS.gene051694 | MS.gene22206 | 0.825296 | 5.06E-54 | -1.69E-46 |
MS.gene051858 | MS.gene22206 | 0.878472 | 2.73E-69 | -1.69E-46 |
MS.gene051874 | MS.gene22206 | 0.844714 | 6.37E-59 | -1.69E-46 |
MS.gene051877 | MS.gene22206 | 0.851637 | 7.79E-61 | -1.69E-46 |
MS.gene052078 | MS.gene22206 | 0.827667 | 1.38E-54 | -1.69E-46 |
MS.gene052188 | MS.gene22206 | 0.877651 | 5.30E-69 | -1.69E-46 |
MS.gene052253 | MS.gene22206 | 0.851749 | 7.24E-61 | -1.69E-46 |
MS.gene052271 | MS.gene22206 | 0.847216 | 1.33E-59 | -1.69E-46 |
MS.gene052290 | MS.gene22206 | 0.80871 | 2.71E-50 | -1.69E-46 |
MS.gene052310 | MS.gene22206 | 0.890192 | 1.23E-73 | -1.69E-46 |
MS.gene052322 | MS.gene22206 | 0.840068 | 1.09E-57 | -1.69E-46 |
MS.gene052326 | MS.gene22206 | 0.803089 | 4.12E-49 | -1.69E-46 |
MS.gene052340 | MS.gene22206 | 0.844328 | 8.09E-59 | -1.69E-46 |
MS.gene052346 | MS.gene22206 | 0.806758 | 7.04E-50 | -1.69E-46 |
MS.gene052379 | MS.gene22206 | 0.838881 | 2.21E-57 | -1.69E-46 |
MS.gene052421 | MS.gene22206 | 0.900478 | 7.04E-78 | -1.69E-46 |
MS.gene052481 | MS.gene22206 | 0.849952 | 2.32E-60 | -1.69E-46 |
MS.gene052484 | MS.gene22206 | 0.860606 | 1.84E-63 | -1.69E-46 |
MS.gene052485 | MS.gene22206 | 0.872094 | 4.14E-67 | -1.69E-46 |
MS.gene052501 | MS.gene22206 | 0.811473 | 6.88E-51 | -1.69E-46 |
MS.gene052505 | MS.gene22206 | 0.824527 | 7.69E-54 | -1.69E-46 |
MS.gene052615 | MS.gene22206 | 0.848561 | 5.67E-60 | -1.69E-46 |
MS.gene052870 | MS.gene22206 | 0.818153 | 2.27E-52 | -1.69E-46 |
MS.gene052872 | MS.gene22206 | 0.811246 | 7.71E-51 | -1.69E-46 |
MS.gene052999 | MS.gene22206 | 0.81233 | 4.48E-51 | -1.69E-46 |
MS.gene053009 | MS.gene22206 | 0.827861 | 1.24E-54 | -1.69E-46 |
MS.gene053103 | MS.gene22206 | 0.850672 | 1.46E-60 | -1.69E-46 |
MS.gene053104 | MS.gene22206 | 0.841368 | 4.96E-58 | -1.69E-46 |
MS.gene053207 | MS.gene22206 | 0.816354 | 5.78E-52 | -1.69E-46 |
MS.gene053209 | MS.gene22206 | 0.843947 | 1.02E-58 | -1.69E-46 |
MS.gene053213 | MS.gene22206 | 0.84112 | 5.76E-58 | -1.69E-46 |
MS.gene053286 | MS.gene22206 | 0.824291 | 8.74E-54 | -1.69E-46 |
MS.gene053322 | MS.gene22206 | 0.869252 | 3.56E-66 | -1.69E-46 |
MS.gene053384 | MS.gene22206 | 0.816917 | 4.32E-52 | -1.69E-46 |
MS.gene053449 | MS.gene22206 | 0.884174 | 2.40E-71 | -1.69E-46 |
MS.gene053557 | MS.gene22206 | 0.807629 | 4.60E-50 | -1.69E-46 |
MS.gene053574 | MS.gene22206 | 0.856437 | 3.22E-62 | -1.69E-46 |
MS.gene053632 | MS.gene22206 | 0.809343 | 1.98E-50 | -1.69E-46 |
MS.gene053758 | MS.gene22206 | 0.874922 | 4.62E-68 | -1.69E-46 |
MS.gene053813 | MS.gene22206 | 0.881154 | 3.04E-70 | -1.69E-46 |
MS.gene053824 | MS.gene22206 | 0.810204 | 1.29E-50 | -1.69E-46 |
MS.gene053912 | MS.gene22206 | 0.855295 | 6.94E-62 | -1.69E-46 |
MS.gene053916 | MS.gene22206 | 0.832847 | 7.48E-56 | -1.69E-46 |
MS.gene054011 | MS.gene22206 | 0.801325 | 9.50E-49 | -1.69E-46 |
MS.gene054123 | MS.gene22206 | 0.820686 | 6.02E-53 | -1.69E-46 |
MS.gene054376 | MS.gene22206 | 0.848029 | 7.95E-60 | -1.69E-46 |
MS.gene054543 | MS.gene22206 | 0.812797 | 3.54E-51 | -1.69E-46 |
MS.gene054642 | MS.gene22206 | 0.816125 | 6.50E-52 | -1.69E-46 |
MS.gene054802 | MS.gene22206 | 0.836902 | 7.13E-57 | -1.69E-46 |
MS.gene054803 | MS.gene22206 | 0.835118 | 2.02E-56 | -1.69E-46 |
MS.gene054804 | MS.gene22206 | 0.835821 | 1.34E-56 | -1.69E-46 |
MS.gene054927 | MS.gene22206 | 0.801274 | 9.73E-49 | -1.69E-46 |
MS.gene054955 | MS.gene22206 | 0.857991 | 1.12E-62 | -1.69E-46 |
MS.gene05505 | MS.gene22206 | 0.910892 | 1.13E-82 | -1.69E-46 |
MS.gene055116 | MS.gene22206 | 0.879139 | 1.59E-69 | -1.69E-46 |
MS.gene055206 | MS.gene22206 | 0.834679 | 2.61E-56 | -1.69E-46 |
MS.gene055224 | MS.gene22206 | 0.816009 | 6.90E-52 | -1.69E-46 |
MS.gene055277 | MS.gene22206 | 0.858669 | 7.03E-63 | -1.69E-46 |
MS.gene055289 | MS.gene22206 | 0.819767 | 9.77E-53 | -1.69E-46 |
MS.gene055397 | MS.gene22206 | 0.825812 | 3.82E-54 | -1.69E-46 |
MS.gene055412 | MS.gene22206 | 0.82073 | 5.88E-53 | -1.69E-46 |
MS.gene055422 | MS.gene22206 | 0.820339 | 7.23E-53 | -1.69E-46 |
MS.gene055499 | MS.gene22206 | 0.83283 | 7.56E-56 | -1.69E-46 |
MS.gene055533 | MS.gene22206 | 0.82171 | 3.49E-53 | -1.69E-46 |
MS.gene055647 | MS.gene22206 | 0.851227 | 1.02E-60 | -1.69E-46 |
MS.gene055722 | MS.gene22206 | 0.872941 | 2.16E-67 | -1.69E-46 |
MS.gene055909 | MS.gene22206 | 0.844674 | 6.53E-59 | -1.69E-46 |
MS.gene055911 | MS.gene22206 | 0.848114 | 7.53E-60 | -1.69E-46 |
MS.gene05592 | MS.gene22206 | 0.893367 | 6.71E-75 | -1.69E-46 |
MS.gene055941 | MS.gene22206 | 0.844146 | 9.06E-59 | -1.69E-46 |
MS.gene056083 | MS.gene22206 | 0.813362 | 2.66E-51 | -1.69E-46 |
MS.gene056191 | MS.gene22206 | 0.87335 | 1.57E-67 | -1.69E-46 |
MS.gene056374 | MS.gene22206 | 0.812729 | 3.66E-51 | -1.69E-46 |
MS.gene056407 | MS.gene22206 | 0.840217 | 9.93E-58 | -1.69E-46 |
MS.gene056410 | MS.gene22206 | 0.860523 | 1.95E-63 | -1.69E-46 |
MS.gene056422 | MS.gene22206 | 0.859889 | 3.03E-63 | -1.69E-46 |
MS.gene056448 | MS.gene22206 | 0.845028 | 5.24E-59 | -1.69E-46 |
MS.gene056511 | MS.gene22206 | 0.910967 | 1.03E-82 | -1.69E-46 |
MS.gene056549 | MS.gene22206 | 0.809599 | 1.75E-50 | -1.69E-46 |
MS.gene056609 | MS.gene22206 | 0.846336 | 2.32E-59 | -1.69E-46 |
MS.gene05664 | MS.gene22206 | 0.806132 | 9.54E-50 | -1.69E-46 |
MS.gene056657 | MS.gene22206 | 0.803746 | 3.01E-49 | -1.69E-46 |
MS.gene056659 | MS.gene22206 | 0.808249 | 3.40E-50 | -1.69E-46 |
MS.gene05666 | MS.gene22206 | 0.809803 | 1.58E-50 | -1.69E-46 |
MS.gene056897 | MS.gene22206 | 0.803945 | 2.74E-49 | -1.69E-46 |
MS.gene056942 | MS.gene22206 | 0.808132 | 3.60E-50 | -1.69E-46 |
MS.gene056946 | MS.gene22206 | 0.800944 | 1.14E-48 | -1.69E-46 |
MS.gene057011 | MS.gene22206 | 0.830791 | 2.41E-55 | -1.69E-46 |
MS.gene05702 | MS.gene22206 | 0.824003 | 1.02E-53 | -1.69E-46 |
MS.gene057076 | MS.gene22206 | 0.874368 | 7.13E-68 | -1.69E-46 |
MS.gene057123 | MS.gene22206 | 0.872019 | 4.39E-67 | -1.69E-46 |
MS.gene057124 | MS.gene22206 | 0.826294 | 2.94E-54 | -1.69E-46 |
MS.gene057129 | MS.gene22206 | 0.842795 | 2.08E-58 | -1.69E-46 |
MS.gene057146 | MS.gene22206 | 0.900873 | 4.73E-78 | -1.69E-46 |
MS.gene057285 | MS.gene22206 | 0.837904 | 3.95E-57 | -1.69E-46 |
MS.gene057310 | MS.gene22206 | 0.804625 | 1.97E-49 | -1.69E-46 |
MS.gene057331 | MS.gene22206 | 0.860417 | 2.10E-63 | -1.69E-46 |
MS.gene05735 | MS.gene22206 | 0.827055 | 1.93E-54 | -1.69E-46 |
MS.gene057416 | MS.gene22206 | 0.880872 | 3.84E-70 | -1.69E-46 |
MS.gene057448 | MS.gene22206 | 0.826694 | 2.36E-54 | -1.69E-46 |
MS.gene057449 | MS.gene22206 | 0.825625 | 4.23E-54 | -1.69E-46 |
MS.gene057450 | MS.gene22206 | 0.829542 | 4.86E-55 | -1.69E-46 |
MS.gene057734 | MS.gene22206 | 0.842925 | 1.92E-58 | -1.69E-46 |
MS.gene057749 | MS.gene22206 | 0.840443 | 8.67E-58 | -1.69E-46 |
MS.gene057779 | MS.gene22206 | 0.810684 | 1.02E-50 | -1.69E-46 |
MS.gene057796 | MS.gene22206 | 0.811238 | 7.74E-51 | -1.69E-46 |
MS.gene057823 | MS.gene22206 | 0.846013 | 2.84E-59 | -1.69E-46 |
MS.gene057856 | MS.gene22206 | 0.827901 | 1.21E-54 | -1.69E-46 |
MS.gene057926 | MS.gene22206 | 0.837532 | 4.92E-57 | -1.69E-46 |
MS.gene057927 | MS.gene22206 | 0.812124 | 4.96E-51 | -1.69E-46 |
MS.gene058002 | MS.gene22206 | 0.806173 | 9.35E-50 | -1.69E-46 |
MS.gene058006 | MS.gene22206 | 0.857295 | 1.80E-62 | -1.69E-46 |
MS.gene058007 | MS.gene22206 | 0.848124 | 7.48E-60 | -1.69E-46 |
MS.gene058019 | MS.gene22206 | 0.855175 | 7.52E-62 | -1.69E-46 |
MS.gene058075 | MS.gene22206 | 0.813267 | 2.79E-51 | -1.69E-46 |
MS.gene058082 | MS.gene22206 | 0.802389 | 5.74E-49 | -1.69E-46 |
MS.gene05811 | MS.gene22206 | 0.832916 | 7.19E-56 | -1.69E-46 |
MS.gene058130 | MS.gene22206 | 0.821698 | 3.52E-53 | -1.69E-46 |
MS.gene058233 | MS.gene22206 | 0.807947 | 3.94E-50 | -1.69E-46 |
MS.gene058293 | MS.gene22206 | 0.840345 | 9.19E-58 | -1.69E-46 |
MS.gene058323 | MS.gene22206 | 0.822764 | 1.99E-53 | -1.69E-46 |
MS.gene058365 | MS.gene22206 | 0.801817 | 7.53E-49 | -1.69E-46 |
MS.gene058376 | MS.gene22206 | 0.831391 | 1.71E-55 | -1.69E-46 |
MS.gene058419 | MS.gene22206 | 0.82182 | 3.29E-53 | -1.69E-46 |
MS.gene058444 | MS.gene22206 | 0.812425 | 4.27E-51 | -1.69E-46 |
MS.gene058459 | MS.gene22206 | 0.813112 | 3.02E-51 | -1.69E-46 |
MS.gene058660 | MS.gene22206 | 0.890639 | 8.21E-74 | -1.69E-46 |
MS.gene058700 | MS.gene22206 | 0.835464 | 1.65E-56 | -1.69E-46 |
MS.gene058723 | MS.gene22206 | 0.809699 | 1.66E-50 | -1.69E-46 |
MS.gene05883 | MS.gene22206 | 0.827985 | 1.16E-54 | -1.69E-46 |
MS.gene058840 | MS.gene22206 | -0.800923 | 1.15E-48 | -1.69E-46 |
MS.gene05886 | MS.gene22206 | 0.805964 | 1.04E-49 | -1.69E-46 |
MS.gene058928 | MS.gene22206 | 0.872995 | 2.07E-67 | -1.69E-46 |
MS.gene058993 | MS.gene22206 | 0.814125 | 1.81E-51 | -1.69E-46 |
MS.gene058995 | MS.gene22206 | 0.827497 | 1.51E-54 | -1.69E-46 |
MS.gene059029 | MS.gene22206 | 0.821774 | 3.38E-53 | -1.69E-46 |
MS.gene05907 | MS.gene22206 | 0.869507 | 2.94E-66 | -1.69E-46 |
MS.gene05913 | MS.gene22206 | 0.814176 | 1.76E-51 | -1.69E-46 |
MS.gene059141 | MS.gene22206 | 0.803708 | 3.06E-49 | -1.69E-46 |
MS.gene059294 | MS.gene22206 | 0.841735 | 3.97E-58 | -1.69E-46 |
MS.gene059305 | MS.gene22206 | 0.805811 | 1.11E-49 | -1.69E-46 |
MS.gene059326 | MS.gene22206 | 0.801923 | 7.16E-49 | -1.69E-46 |
MS.gene05934 | MS.gene22206 | 0.846321 | 2.34E-59 | -1.69E-46 |
MS.gene059366 | MS.gene22206 | 0.860609 | 1.83E-63 | -1.69E-46 |
MS.gene059368 | MS.gene22206 | 0.823697 | 1.21E-53 | -1.69E-46 |
MS.gene059420 | MS.gene22206 | 0.831145 | 1.97E-55 | -1.69E-46 |
MS.gene059455 | MS.gene22206 | 0.830348 | 3.09E-55 | -1.69E-46 |
MS.gene059536 | MS.gene22206 | 0.889559 | 2.17E-73 | -1.69E-46 |
MS.gene059597 | MS.gene22206 | 0.842212 | 2.97E-58 | -1.69E-46 |
MS.gene05959 | MS.gene22206 | 0.802525 | 5.38E-49 | -1.69E-46 |
MS.gene059674 | MS.gene22206 | 0.841123 | 5.75E-58 | -1.69E-46 |
MS.gene059676 | MS.gene22206 | 0.87113 | 8.64E-67 | -1.69E-46 |
MS.gene059688 | MS.gene22206 | 0.911823 | 3.93E-83 | -1.69E-46 |
MS.gene059692 | MS.gene22206 | 0.894982 | 1.48E-75 | -1.69E-46 |
MS.gene059695 | MS.gene22206 | 0.894927 | 1.56E-75 | -1.69E-46 |
MS.gene059711 | MS.gene22206 | 0.881497 | 2.29E-70 | -1.69E-46 |
MS.gene059718 | MS.gene22206 | 0.821072 | 4.90E-53 | -1.69E-46 |
MS.gene059807 | MS.gene22206 | 0.867523 | 1.29E-65 | -1.69E-46 |
MS.gene05984 | MS.gene22206 | 0.816958 | 4.23E-52 | -1.69E-46 |
MS.gene05986 | MS.gene22206 | 0.809415 | 1.91E-50 | -1.69E-46 |
MS.gene059902 | MS.gene22206 | 0.87426 | 7.76E-68 | -1.69E-46 |
MS.gene059960 | MS.gene22206 | 0.860297 | 2.28E-63 | -1.69E-46 |
MS.gene059974 | MS.gene22206 | 0.815555 | 8.71E-52 | -1.69E-46 |
MS.gene060193 | MS.gene22206 | 0.828816 | 7.29E-55 | -1.69E-46 |
MS.gene060372 | MS.gene22206 | 0.806036 | 1.00E-49 | -1.69E-46 |
MS.gene06037 | MS.gene22206 | 0.820123 | 8.10E-53 | -1.69E-46 |
MS.gene060403 | MS.gene22206 | 0.866545 | 2.64E-65 | -1.69E-46 |
MS.gene060482 | MS.gene22206 | 0.811531 | 6.68E-51 | -1.69E-46 |
MS.gene060804 | MS.gene22206 | 0.897232 | 1.72E-76 | -1.69E-46 |
MS.gene060818 | MS.gene22206 | 0.89276 | 1.18E-74 | -1.69E-46 |
MS.gene060835 | MS.gene22206 | 0.848724 | 5.11E-60 | -1.69E-46 |
MS.gene060837 | MS.gene22206 | 0.88995 | 1.53E-73 | -1.69E-46 |
MS.gene06092 | MS.gene22206 | 0.815245 | 1.02E-51 | -1.69E-46 |
MS.gene061041 | MS.gene22206 | 0.872953 | 2.14E-67 | -1.69E-46 |
MS.gene061049 | MS.gene22206 | 0.834442 | 2.99E-56 | -1.69E-46 |
MS.gene061051 | MS.gene22206 | -0.838546 | 2.70E-57 | -1.69E-46 |
MS.gene061134 | MS.gene22206 | 0.829148 | 6.05E-55 | -1.69E-46 |
MS.gene061154 | MS.gene22206 | 0.835279 | 1.84E-56 | -1.69E-46 |
MS.gene061200 | MS.gene22206 | 0.879061 | 1.69E-69 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22206.t1 | MTR_3g450510 | 98.228 | 395 | 7 | 0 | 1 | 395 | 1 | 395 | 0.0 | 806 |
MS.gene22206.t1 | MTR_5g090780 | 79.899 | 398 | 67 | 4 | 1 | 395 | 1 | 388 | 0.0 | 648 |
MS.gene22206.t1 | MTR_5g076620 | 76.696 | 339 | 75 | 1 | 50 | 388 | 95 | 429 | 0.0 | 539 |
MS.gene22206.t1 | MTR_5g076620 | 76.817 | 289 | 63 | 1 | 50 | 338 | 95 | 379 | 4.02e-163 | 463 |
MS.gene22206.t1 | MTR_3g083630 | 69.395 | 281 | 86 | 0 | 98 | 378 | 87 | 367 | 1.00e-152 | 437 |
MS.gene22206.t1 | MTR_3g083650 | 61.972 | 71 | 27 | 0 | 124 | 194 | 1 | 71 | 6.78e-27 | 102 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22206.t1 | AT5G17230 | 76.420 | 352 | 78 | 2 | 29 | 378 | 59 | 407 | 0.0 | 552 |
MS.gene22206.t1 | AT5G17230 | 76.420 | 352 | 78 | 2 | 29 | 378 | 59 | 407 | 0.0 | 552 |
MS.gene22206.t1 | AT5G17230 | 76.420 | 352 | 78 | 2 | 29 | 378 | 59 | 407 | 0.0 | 552 |
MS.gene22206.t1 | AT5G17230 | 73.297 | 367 | 78 | 3 | 29 | 378 | 59 | 422 | 0.0 | 542 |
Find 88 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGATGTCTGGTGTTCTTCTT+TGG | 0.203427 | 3.4:-40505609 | MS.gene22206:CDS |
TGTTCATCTTGTAGTCATTT+TGG | 0.206973 | 3.4:+40501992 | None:intergenic |
CCTTCAATCATGTCTTTAAA+TGG | 0.223849 | 3.4:+40502874 | None:intergenic |
AGAGAATGCCATTTCCTTAA+TGG | 0.264096 | 3.4:-40505569 | MS.gene22206:CDS |
TCTTCCTCCAAGACCCATTA+AGG | 0.297295 | 3.4:+40505555 | None:intergenic |
GAGAATGCCATTTCCTTAAT+GGG | 0.302605 | 3.4:-40505568 | MS.gene22206:CDS |
CTAATTAGACATACCGTAAA+TGG | 0.307530 | 3.4:+40504400 | None:intergenic |
CAGCAAGTAGATGGCCTGTT+TGG | 0.307680 | 3.4:-40502166 | MS.gene22206:CDS |
TTGTCACTTCCTGTTGCTCT+TGG | 0.311897 | 3.4:-40502044 | MS.gene22206:CDS |
GATGCTCTCTGTTGAAGCTT+TGG | 0.337629 | 3.4:+40502729 | None:intergenic |
CTTATGAGTGTTCCTGTAAT+GGG | 0.347887 | 3.4:-40502766 | MS.gene22206:CDS |
GCCATTTCCTTAATGGGTCT+TGG | 0.351168 | 3.4:-40505562 | MS.gene22206:CDS |
TGTGGTTCTATCCCCATTAC+AGG | 0.351831 | 3.4:+40502754 | None:intergenic |
AGGAGGTTTAGACATTGTTC+TGG | 0.362139 | 3.4:-40505517 | MS.gene22206:CDS |
TCCCATCTGTCCAAGGCCTT+TGG | 0.363807 | 3.4:+40504236 | None:intergenic |
CATGAAATTGCGCCATTTGT+CGG | 0.363909 | 3.4:+40502256 | None:intergenic |
GGGCATCTTTGCTGTTGTAT+AGG | 0.372606 | 3.4:-40502145 | MS.gene22206:CDS |
CTATATTGCTACTATGTTGC+TGG | 0.386898 | 3.4:-40502799 | MS.gene22206:CDS |
GATGTCTGGTGTTCTTCTTT+GGG | 0.389571 | 3.4:-40505608 | MS.gene22206:CDS |
CAGCAACATAGTAGCAATAT+AGG | 0.392016 | 3.4:+40502800 | None:intergenic |
AGCAAGTAGATGGCCTGTTT+GGG | 0.395898 | 3.4:-40502165 | MS.gene22206:CDS |
TAACCTACCTGTATATCAAC+AGG | 0.395934 | 3.4:+40504134 | None:intergenic |
AAAGCCATATGGGCCATTTA+CGG | 0.401396 | 3.4:-40504413 | MS.gene22206:intron |
CTCTCCTCTGAGGATCTTGT+AGG | 0.415075 | 3.4:+40505457 | None:intergenic |
GCTCTTGGAATAGCAACGTT+TGG | 0.415641 | 3.4:-40502029 | MS.gene22206:CDS |
TTGGTGAAATCACCTTCAAT+AGG | 0.419066 | 3.4:+40505346 | None:intergenic |
TCCAAGACCCATTAAGGAAA+TGG | 0.420248 | 3.4:+40505561 | None:intergenic |
AGCTCAGTTCAGCAAGTAGA+TGG | 0.427080 | 3.4:-40502175 | MS.gene22206:CDS |
GTACCTTCCGCAAGATGAAT+TGG | 0.429606 | 3.4:-40502324 | MS.gene22206:CDS |
TGTTCTATTCCTAAGATGTC+TGG | 0.436560 | 3.4:-40505622 | None:intergenic |
CCTTATGAGTGTTCCTGTAA+TGG | 0.441118 | 3.4:-40502767 | MS.gene22206:CDS |
ACTATAATAACTTCACCAAA+CGG | 0.449049 | 3.4:-40502094 | MS.gene22206:CDS |
CATACCGTAAATGGCCCATA+TGG | 0.458649 | 3.4:+40504409 | None:intergenic |
AAAGTACCCTGTTGATATAC+AGG | 0.460407 | 3.4:-40504141 | MS.gene22206:intron |
GTTCTTCTTTGGGTGAATTG+TGG | 0.464290 | 3.4:-40505598 | MS.gene22206:CDS |
GGTGTGATGTGTGAAGCATT+AGG | 0.465088 | 3.4:+40504257 | None:intergenic |
AAGAGAGAAGAAAAGCCATA+TGG | 0.465862 | 3.4:-40504424 | MS.gene22206:CDS |
GTTGCTATTCCAAGAGCAAC+AGG | 0.466089 | 3.4:+40502035 | None:intergenic |
TACTATGTTGCTGGGACAGT+GGG | 0.466882 | 3.4:-40502790 | MS.gene22206:CDS |
AACAGCAAAGATGCCCAAAC+AGG | 0.470763 | 3.4:+40502152 | None:intergenic |
ACACATCACACCAAAGGCCT+TGG | 0.473491 | 3.4:-40504246 | MS.gene22206:CDS |
CTATAATAACTTCACCAAAC+GGG | 0.476146 | 3.4:-40502093 | MS.gene22206:CDS |
TTGGATGATAAGCCTATTGA+AGG | 0.477265 | 3.4:-40505358 | MS.gene22206:CDS |
TACAATGCTGCATTGGCACT+TGG | 0.478711 | 3.4:-40502706 | MS.gene22206:CDS |
CACCAAAGGCCTTGGACAGA+TGG | 0.481447 | 3.4:-40504238 | MS.gene22206:CDS |
CCATTTAAAGACATGATTGA+AGG | 0.482461 | 3.4:-40502874 | MS.gene22206:CDS |
TATATTGCTACTATGTTGCT+GGG | 0.496318 | 3.4:-40502798 | MS.gene22206:CDS |
GCAGCATCATACATATCATA+AGG | 0.497935 | 3.4:+40504182 | None:intergenic |
TCTGTTGAAGCTTTGGATTG+TGG | 0.503008 | 3.4:+40502736 | None:intergenic |
TTGAAGGTGATTTCACCAAT+GGG | 0.504638 | 3.4:-40505342 | MS.gene22206:CDS |
CAGAAGAACAGATGAGTTAG+TGG | 0.511011 | 3.4:-40504285 | MS.gene22206:CDS |
CCATTACAGGAACACTCATA+AGG | 0.511875 | 3.4:+40502767 | None:intergenic |
CAAGATGAATTGGCACAAGC+TGG | 0.511937 | 3.4:-40502314 | MS.gene22206:CDS |
AAGACATGATTGAAGGGATG+AGG | 0.513888 | 3.4:-40502867 | MS.gene22206:CDS |
ATTGAAGGTGATTTCACCAA+TGG | 0.516585 | 3.4:-40505343 | MS.gene22206:CDS |
CATGATTGAAGGGATGAGGC+TGG | 0.519563 | 3.4:-40502863 | MS.gene22206:CDS |
TCTTTGTTCCCATCTGTCCA+AGG | 0.520607 | 3.4:+40504229 | None:intergenic |
CTACTATGTTGCTGGGACAG+TGG | 0.529274 | 3.4:-40502791 | MS.gene22206:CDS |
GAGGCAGAGTAACCGACAAA+TGG | 0.531514 | 3.4:-40502268 | MS.gene22206:CDS |
ATTTCCTTAATGGGTCTTGG+AGG | 0.532616 | 3.4:-40505559 | MS.gene22206:CDS |
ACCAAAGGCCTTGGACAGAT+GGG | 0.533995 | 3.4:-40504237 | MS.gene22206:CDS |
CATTTAAAGACATGATTGAA+GGG | 0.534248 | 3.4:-40502873 | MS.gene22206:CDS |
TTCACCAAACGGGCTTATGT+AGG | 0.535111 | 3.4:-40502083 | MS.gene22206:CDS |
AGAGAGAAGAAAAGCCATAT+GGG | 0.536115 | 3.4:-40504423 | MS.gene22206:CDS |
TACAAGATCCTCAGAGGAGA+GGG | 0.538242 | 3.4:-40505455 | MS.gene22206:CDS |
GAGCATCTACAATGCTGCAT+TGG | 0.547623 | 3.4:-40502713 | MS.gene22206:CDS |
CAAATGGCGCAATTTCATGA+AGG | 0.578152 | 3.4:-40502252 | MS.gene22206:CDS |
GAAGAGATGTAAGAACTCAA+AGG | 0.580755 | 3.4:-40505537 | MS.gene22206:CDS |
GTGCCAATTCATCTTGCGGA+AGG | 0.588837 | 3.4:+40502321 | None:intergenic |
TCCAACGTCTCTAAGTATGT+TGG | 0.590935 | 3.4:+40502666 | None:intergenic |
AGAACTCAAAAGTTCCCCAT+TGG | 0.594991 | 3.4:+40505327 | None:intergenic |
GCTTGTGCCAATTCATCTTG+CGG | 0.595244 | 3.4:+40502317 | None:intergenic |
AGGGTCAAATAAAGAGAGCA+AGG | 0.603555 | 3.4:-40502232 | MS.gene22206:CDS |
ACCAACATACTTAGAGACGT+TGG | 0.613097 | 3.4:-40502667 | MS.gene22206:CDS |
AGAACAGATGAGTTAGTGGA+TGG | 0.619649 | 3.4:-40504281 | MS.gene22206:CDS |
AAATGGCGCAATTTCATGAA+GGG | 0.620886 | 3.4:-40502251 | MS.gene22206:CDS |
AGAGGAGAGGGTGTATGAAG+TGG | 0.622701 | 3.4:-40505443 | MS.gene22206:CDS |
TTATGAGTGTTCCTGTAATG+GGG | 0.627271 | 3.4:-40502765 | MS.gene22206:CDS |
TGCTTCACACATCACACCAA+AGG | 0.631660 | 3.4:-40504252 | MS.gene22206:CDS |
AGTTCTGCTTATGATAGATG+TGG | 0.632966 | 3.4:-40505310 | MS.gene22206:CDS |
CTACAAGATCCTCAGAGGAG+AGG | 0.648794 | 3.4:-40505456 | MS.gene22206:CDS |
TCGTCTTATAGTGCTAGAAG+AGG | 0.652452 | 3.4:-40502353 | MS.gene22206:intron |
GAAGCAAGCAGCTCTAGTGA+AGG | 0.652466 | 3.4:-40505416 | MS.gene22206:CDS |
TTCATACACCCTCTCCTCTG+AGG | 0.670132 | 3.4:+40505447 | None:intergenic |
GAGATGTAAGAACTCAAAGG+AGG | 0.681375 | 3.4:-40505534 | MS.gene22206:CDS |
TGAAGGTGATTTCACCAATG+GGG | 0.696835 | 3.4:-40505341 | MS.gene22206:CDS |
AACCTACCTGTATATCAACA+GGG | 0.701397 | 3.4:+40504135 | None:intergenic |
TGAACCTACAAGATCCTCAG+AGG | 0.724557 | 3.4:-40505461 | MS.gene22206:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTTAACCATATTTATTA+TGG | - | chr3.4:40505148-40505167 | MS.gene22206:intron | 10.0% |
!!! | ATTTTGTTATTTTTTGAAAA+GGG | + | chr3.4:40504364-40504383 | None:intergenic | 10.0% |
!!! | ATTTAGCATTATTTTTGTTT+TGG | + | chr3.4:40504118-40504137 | None:intergenic | 15.0% |
!!! | ATTTATGTATATGTATTTTG+TGG | + | chr3.4:40504187-40504206 | None:intergenic | 15.0% |
!!! | GATTTTGTTATTTTTTGAAA+AGG | + | chr3.4:40504365-40504384 | None:intergenic | 15.0% |
!!! | TATAATTTTTGAAGGTATAA+AGG | + | chr3.4:40503536-40503555 | None:intergenic | 15.0% |
!!! | TTATAATTTTGTCAAAATCA+CGG | + | chr3.4:40502862-40502881 | None:intergenic | 15.0% |
!!! | TTGATAACATGAATATTTTT+TGG | - | chr3.4:40502403-40502422 | MS.gene22206:intron | 15.0% |
!! | AAATTTCACATTTCAACTTT+GGG | + | chr3.4:40503511-40503530 | None:intergenic | 20.0% |
!! | AATTTAGACGATATATCATA+GGG | - | chr3.4:40502564-40502583 | MS.gene22206:intron | 20.0% |
!! | ACCATCTTAAAATTTGTATT+TGG | + | chr3.4:40503822-40503841 | None:intergenic | 20.0% |
!! | AGAAAAGATATTAAAAAGAG+AGG | - | chr3.4:40502214-40502233 | MS.gene22206:CDS | 20.0% |
!! | ATAAATATGACTTGAAAATG+TGG | - | chr3.4:40504551-40504570 | MS.gene22206:intron | 20.0% |
!! | GAATATGTTTGCTTAAAATT+AGG | - | chr3.4:40503606-40503625 | MS.gene22206:intron | 20.0% |
!! | TAAATTTCACATTTCAACTT+TGG | + | chr3.4:40503512-40503531 | None:intergenic | 20.0% |
!!! | GAAAAGTTGGTATATTTATA+GGG | - | chr3.4:40505116-40505135 | MS.gene22206:intron | 20.0% |
!!! | TATGCAAAGACATTTTATTT+AGG | - | chr3.4:40502331-40502350 | MS.gene22206:CDS | 20.0% |
!!! | TTTGAAGTTTTGATCAATAA+AGG | + | chr3.4:40503134-40503153 | None:intergenic | 20.0% |
! | AAATGAACATGTAACTAGTT+AGG | - | chr3.4:40504203-40504222 | MS.gene22206:CDS | 25.0% |
! | ACCATATTTATTATGGATGA+TGG | - | chr3.4:40505155-40505174 | MS.gene22206:intron | 25.0% |
! | ACTATAATAACTTCACCAAA+CGG | - | chr3.4:40505508-40505527 | MS.gene22206:CDS | 25.0% |
! | ATATTGTAAGTTTGAATTGG+CGG | + | chr3.4:40503049-40503068 | None:intergenic | 25.0% |
! | ATGCTAATTAATAGTTCAGT+CGG | + | chr3.4:40502682-40502701 | None:intergenic | 25.0% |
! | CATTAATTAGAAATCGAACT+CGG | - | chr3.4:40505015-40505034 | MS.gene22206:intron | 25.0% |
! | CATTTAAAGACATGATTGAA+GGG | - | chr3.4:40504729-40504748 | MS.gene22206:intron | 25.0% |
! | CTTCAAAATTTCTGTTACAA+AGG | - | chr3.4:40503228-40503247 | MS.gene22206:intron | 25.0% |
! | GAATTTAGACGATATATCAT+AGG | - | chr3.4:40502563-40502582 | MS.gene22206:intron | 25.0% |
! | GTAAGATATTGTCAAAAACA+CGG | - | chr3.4:40502997-40503016 | MS.gene22206:intron | 25.0% |
! | GTAATCAAGGTTATCAAAAT+CGG | - | chr3.4:40503942-40503961 | MS.gene22206:intron | 25.0% |
! | TAAAAAGAGAGGTTTGAATT+TGG | - | chr3.4:40502225-40502244 | MS.gene22206:CDS | 25.0% |
! | TAATCAAGGTTATCAAAATC+GGG | - | chr3.4:40503943-40503962 | MS.gene22206:intron | 25.0% |
! | TTTGCGAATATGTTACATAA+CGG | - | chr3.4:40502916-40502935 | MS.gene22206:intron | 25.0% |
!! | AAATTGATTTCATCTCTCTA+AGG | - | chr3.4:40503631-40503650 | MS.gene22206:intron | 25.0% |
!! | AAGACATCGTAAACTATTTT+TGG | + | chr3.4:40502736-40502755 | None:intergenic | 25.0% |
!! | AGAGACTATCTAAAATTTGA+TGG | - | chr3.4:40503845-40503864 | MS.gene22206:intron | 25.0% |
!! | AGTGAAAGAATGAAATGTTT+TGG | - | chr3.4:40504268-40504287 | MS.gene22206:CDS | 25.0% |
!! | CAACTAGCTATAATTTTTGA+AGG | + | chr3.4:40503544-40503563 | None:intergenic | 25.0% |
!! | GAGACTATCTAAAATTTGAT+GGG | - | chr3.4:40503846-40503865 | MS.gene22206:intron | 25.0% |
!! | GCGAAAAATCTAAAACAAAA+GGG | + | chr3.4:40502369-40502388 | None:intergenic | 25.0% |
!! | TATTGTATCTTGATTTTCTC+AGG | + | chr3.4:40504766-40504785 | None:intergenic | 25.0% |
!! | TGCGAAAAATCTAAAACAAA+AGG | + | chr3.4:40502370-40502389 | None:intergenic | 25.0% |
!! | TTGTCATTTAAGCAAATAGA+AGG | - | chr3.4:40504645-40504664 | MS.gene22206:intron | 25.0% |
!!! | AGATTAACTGATGTTTTTGA+AGG | - | chr3.4:40503393-40503412 | MS.gene22206:intron | 25.0% |
!!! | ATATGTTACATAACGGATTT+AGG | - | chr3.4:40502923-40502942 | MS.gene22206:intron | 25.0% |
!!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr3.4:40505115-40505134 | MS.gene22206:intron | 25.0% |
!!! | CTAATTTTTTCTTGTTTCCA+TGG | - | chr3.4:40505226-40505245 | MS.gene22206:intron | 25.0% |
!!! | GCCAAATACAAATTTTAAGA+TGG | - | chr3.4:40503818-40503837 | MS.gene22206:intron | 25.0% |
!!! | TATGTTACATAACGGATTTA+GGG | - | chr3.4:40502924-40502943 | MS.gene22206:intron | 25.0% |
!!! | TCATTTTGGTTAACTTTTGT+GGG | + | chr3.4:40505599-40505618 | None:intergenic | 25.0% |
AAAATCGCAATCAAAATCGA+AGG | - | chr3.4:40504009-40504028 | MS.gene22206:intron | 30.0% | |
AGACATGTGGTTATAATTAG+AGG | - | chr3.4:40505084-40505103 | MS.gene22206:intron | 30.0% | |
ATGAAATTTGAACCGATATG+TGG | + | chr3.4:40502504-40502523 | None:intergenic | 30.0% | |
CACTGTAATAATACATAGAG+TGG | + | chr3.4:40503292-40503311 | None:intergenic | 30.0% | |
CCATTTAAAGACATGATTGA+AGG | - | chr3.4:40504728-40504747 | MS.gene22206:intron | 30.0% | |
CCTTCAATCATGTCTTTAAA+TGG | + | chr3.4:40504731-40504750 | None:intergenic | 30.0% | |
CTAATTAGACATACCGTAAA+TGG | + | chr3.4:40503205-40503224 | None:intergenic | 30.0% | |
CTATAATAACTTCACCAAAC+GGG | - | chr3.4:40505509-40505528 | MS.gene22206:CDS | 30.0% | |
CTCTATGTATTATTACAGTG+TGG | - | chr3.4:40503292-40503311 | MS.gene22206:intron | 30.0% | |
CTTGTATGACACACATATAA+GGG | - | chr3.4:40503658-40503677 | MS.gene22206:intron | 30.0% | |
GAAAAATGTCATCATCTGAT+AGG | + | chr3.4:40505314-40505333 | None:intergenic | 30.0% | |
GACTGAACTATTAATTAGCA+TGG | - | chr3.4:40502681-40502700 | MS.gene22206:CDS | 30.0% | |
GATCAATAAAGGACGAATAA+AGG | + | chr3.4:40503123-40503142 | None:intergenic | 30.0% | |
GCCAATTCAAACTTACAATA+TGG | - | chr3.4:40503048-40503067 | MS.gene22206:intron | 30.0% | |
GCCATATTGTAAGTTTGAAT+TGG | + | chr3.4:40503052-40503071 | None:intergenic | 30.0% | |
GCCATCATCCATAATAAATA+TGG | + | chr3.4:40505159-40505178 | None:intergenic | 30.0% | |
GTATTTATAGAACTGGATCA+TGG | - | chr3.4:40504299-40504318 | MS.gene22206:intron | 30.0% | |
TAAAATCGCAATCAAAATCG+AGG | - | chr3.4:40504008-40504027 | MS.gene22206:intron | 30.0% | |
TAATTAATAGTTCAGTCGGA+AGG | + | chr3.4:40502678-40502697 | None:intergenic | 30.0% | |
TATATTGCTACTATGTTGCT+GGG | - | chr3.4:40504804-40504823 | MS.gene22206:intron | 30.0% | |
TCTCTATCGAACTACTTATA+TGG | + | chr3.4:40502825-40502844 | None:intergenic | 30.0% | |
TCTTAAAACGTGTCATAAGT+GGG | - | chr3.4:40503752-40503771 | MS.gene22206:intron | 30.0% | |
TGATCAAAACTTCAAATCTC+AGG | - | chr3.4:40503138-40503157 | MS.gene22206:intron | 30.0% | |
! | AAATCGAAGGATTTTACTCA+AGG | - | chr3.4:40504022-40504041 | MS.gene22206:intron | 30.0% |
! | ATGTAAAGAAGCTTTAGTCA+TGG | - | chr3.4:40502458-40502477 | MS.gene22206:intron | 30.0% |
! | ATTTGAGTTCAAATCCTAAC+TGG | - | chr3.4:40502626-40502645 | MS.gene22206:intron | 30.0% |
! | GACTTTTGTAGAATCGATAT+AGG | - | chr3.4:40504044-40504063 | MS.gene22206:intron | 30.0% |
! | TTTAGAGCTTCAACAAAACA+CGG | + | chr3.4:40502975-40502994 | None:intergenic | 30.0% |
!! | ATAGGATTTTGCCTGTTTTT+GGG | - | chr3.4:40504435-40504454 | MS.gene22206:CDS | 30.0% |
!!! | AGGATTTTGATGGATTTTGA+AGG | + | chr3.4:40504387-40504406 | None:intergenic | 30.0% |
!!! | GTCATTTTGGTTAACTTTTG+TGG | + | chr3.4:40505600-40505619 | None:intergenic | 30.0% |
!!! | GTGAGTTTTGAAGAAAACAT+GGG | + | chr3.4:40505183-40505202 | None:intergenic | 30.0% |
!!! | TGTGAGTTTTGAAGAAAACA+TGG | + | chr3.4:40505184-40505203 | None:intergenic | 30.0% |
AAATGGCGCAATTTCATGAA+GGG | - | chr3.4:40505351-40505370 | MS.gene22206:CDS | 35.0% | |
AACCTACCTGTATATCAACA+GGG | + | chr3.4:40503470-40503489 | None:intergenic | 35.0% | |
AACTGGATCATGGATTCAAT+CGG | - | chr3.4:40504309-40504328 | MS.gene22206:intron | 35.0% | |
AAGAGAGAAGAAAAGCCATA+TGG | - | chr3.4:40503178-40503197 | MS.gene22206:intron | 35.0% | |
AATCGGGTCAATTTACAAAC+CGG | - | chr3.4:40504326-40504345 | MS.gene22206:intron | 35.0% | |
AGAACTCAAACTAGTCAATG+AGG | - | chr3.4:40503584-40503603 | MS.gene22206:intron | 35.0% | |
AGAGAGAAGAAAAGCCATAT+GGG | - | chr3.4:40503179-40503198 | MS.gene22206:intron | 35.0% | |
AGATGAACGTGTAACTATTG+AGG | - | chr3.4:40504244-40504263 | MS.gene22206:CDS | 35.0% | |
AGTTCTGCTTATGATAGATG+TGG | - | chr3.4:40502292-40502311 | MS.gene22206:CDS | 35.0% | |
ATCCTAACTGGAACAATCAT+CGG | - | chr3.4:40502638-40502657 | MS.gene22206:intron | 35.0% | |
ATTGAAGGTGATTTCACCAA+TGG | - | chr3.4:40502259-40502278 | MS.gene22206:CDS | 35.0% | |
CAGCAACATAGTAGCAATAT+AGG | + | chr3.4:40504805-40504824 | None:intergenic | 35.0% | |
CAGTTCTATAAATACCCACA+AGG | + | chr3.4:40504294-40504313 | None:intergenic | 35.0% | |
CTATATTGCTACTATGTTGC+TGG | - | chr3.4:40504803-40504822 | MS.gene22206:intron | 35.0% | |
CTTAACTTTGTACCGAAATG+TGG | - | chr3.4:40502753-40502772 | MS.gene22206:CDS | 35.0% | |
CTTATGAGTGTTCCTGTAAT+GGG | - | chr3.4:40504836-40504855 | MS.gene22206:intron | 35.0% | |
CTTGTGGGTATTTATAGAAC+TGG | - | chr3.4:40504292-40504311 | MS.gene22206:CDS | 35.0% | |
GAAGAGATGTAAGAACTCAA+AGG | - | chr3.4:40502065-40502084 | MS.gene22206:CDS | 35.0% | |
GACTTTACTTCAAGTCGAAA+GGG | - | chr3.4:40503965-40503984 | MS.gene22206:intron | 35.0% | |
GAGGAACTAAAACGAAAAGT+TGG | - | chr3.4:40505103-40505122 | MS.gene22206:intron | 35.0% | |
GCAGCATCATACATATCATA+AGG | + | chr3.4:40503423-40503442 | None:intergenic | 35.0% | |
GCTTGTATGACACACATATA+AGG | - | chr3.4:40503657-40503676 | MS.gene22206:intron | 35.0% | |
GGAGTCTTACATTGTAATCA+AGG | - | chr3.4:40503929-40503948 | MS.gene22206:intron | 35.0% | |
GTCTTAAAACGTGTCATAAG+TGG | - | chr3.4:40503751-40503770 | MS.gene22206:intron | 35.0% | |
TAAAACGATTGACGAGCAAA+AGG | + | chr3.4:40502603-40502622 | None:intergenic | 35.0% | |
TAACCTACCTGTATATCAAC+AGG | + | chr3.4:40503471-40503490 | None:intergenic | 35.0% | |
TCGATATAGGATAGCAAAGT+CGG | - | chr3.4:40504057-40504076 | MS.gene22206:intron | 35.0% | |
TTACAAAGGCTTCTCTAATG+TGG | - | chr3.4:40503242-40503261 | MS.gene22206:intron | 35.0% | |
TTATGAGTGTTCCTGTAATG+GGG | - | chr3.4:40504837-40504856 | MS.gene22206:intron | 35.0% | |
TTCCACTAGAATCAACCAAA+AGG | + | chr3.4:40502539-40502558 | None:intergenic | 35.0% | |
TTGAAGGTGATTTCACCAAT+GGG | - | chr3.4:40502260-40502279 | MS.gene22206:CDS | 35.0% | |
TTGGATGATAAGCCTATTGA+AGG | - | chr3.4:40502244-40502263 | MS.gene22206:CDS | 35.0% | |
TTGGTGAAATCACCTTCAAT+AGG | + | chr3.4:40502259-40502278 | None:intergenic | 35.0% | |
! | AAAAATGACTTGCAAGACGA+AGG | + | chr3.4:40504590-40504609 | None:intergenic | 35.0% |
! | AAAAGGGTCAATTTTTGACC+CGG | + | chr3.4:40504348-40504367 | None:intergenic | 35.0% |
! | AAAGTACCCTGTTGATATAC+AGG | - | chr3.4:40503461-40503480 | MS.gene22206:intron | 35.0% |
! | AACTTACAAGCCAGTTGTTT+TGG | - | chr3.4:40503786-40503805 | MS.gene22206:intron | 35.0% |
! | AGAGAATGCCATTTCCTTAA+TGG | - | chr3.4:40502033-40502052 | MS.gene22206:CDS | 35.0% |
! | ATTTCAAGTGTTCGATGTGA+TGG | - | chr3.4:40503899-40503918 | MS.gene22206:intron | 35.0% |
! | CAAAATCCTGCGATTTTGAA+CGG | - | chr3.4:40504398-40504417 | MS.gene22206:intron | 35.0% |
! | CATACGTTTATCTTGCCTTT+TGG | - | chr3.4:40502521-40502540 | MS.gene22206:intron | 35.0% |
! | CTCTAGAAGTAACCACATAT+CGG | - | chr3.4:40502489-40502508 | MS.gene22206:intron | 35.0% |
! | GAGAATGCCATTTCCTTAAT+GGG | - | chr3.4:40502034-40502053 | MS.gene22206:CDS | 35.0% |
! | GATAGGATTTTGCCTGTTTT+TGG | - | chr3.4:40504434-40504453 | MS.gene22206:CDS | 35.0% |
! | GTGTCACTAGGATATTCTTT+CGG | + | chr3.4:40502793-40502812 | None:intergenic | 35.0% |
! | TCAAAATCGCAGGATTTTGA+TGG | + | chr3.4:40504397-40504416 | None:intergenic | 35.0% |
! | TCAGATGATGACATTTTTCG+AGG | - | chr3.4:40505315-40505334 | MS.gene22206:CDS | 35.0% |
!! | ACAACTGGCTTGTAAGTTTA+TGG | + | chr3.4:40503784-40503803 | None:intergenic | 35.0% |
!! | ACGGATTTCACGATTTTGAT+AGG | - | chr3.4:40504417-40504436 | MS.gene22206:CDS | 35.0% |
!!! | AATGAAATGTTTTGGCCTTG+TGG | - | chr3.4:40504276-40504295 | MS.gene22206:CDS | 35.0% |
!!! | AGCAAGGATGTTTTTTGATG+AGG | - | chr3.4:40505386-40505405 | MS.gene22206:CDS | 35.0% |
!!! | ATGAAATGTTTTGGCCTTGT+GGG | - | chr3.4:40504277-40504296 | MS.gene22206:CDS | 35.0% |
!!! | TTTTTTGATGAGGCAGAGAA+GGG | - | chr3.4:40505396-40505415 | MS.gene22206:CDS | 35.0% |
AAAGCCATATGGGCCATTTA+CGG | - | chr3.4:40503189-40503208 | MS.gene22206:intron | 40.0% | |
AAGACATGATTGAAGGGATG+AGG | - | chr3.4:40504735-40504754 | MS.gene22206:intron | 40.0% | |
ACATTTCAACTTTGGGCATG+TGG | + | chr3.4:40503504-40503523 | None:intergenic | 40.0% | |
ACCAACATACTTAGAGACGT+TGG | - | chr3.4:40504935-40504954 | MS.gene22206:intron | 40.0% | |
ACCTTCATTCGTAGAAGAGA+TGG | + | chr3.4:40502708-40502727 | None:intergenic | 40.0% | |
ACTGGATCATGGATTCAATC+GGG | - | chr3.4:40504310-40504329 | MS.gene22206:intron | 40.0% | |
AGAACAGATGAGTTAGTGGA+TGG | - | chr3.4:40503321-40503340 | MS.gene22206:intron | 40.0% | |
AGAACTCAAAAGTTCCCCAT+TGG | + | chr3.4:40502278-40502297 | None:intergenic | 40.0% | |
AGGAGGTTTAGACATTGTTC+TGG | - | chr3.4:40502085-40502104 | MS.gene22206:CDS | 40.0% | |
AGGGTCAAATAAAGAGAGCA+AGG | - | chr3.4:40505370-40505389 | MS.gene22206:CDS | 40.0% | |
ATCGGGTCAATTTACAAACC+GGG | - | chr3.4:40504327-40504346 | MS.gene22206:intron | 40.0% | |
CAAATGGCGCAATTTCATGA+AGG | - | chr3.4:40505350-40505369 | MS.gene22206:CDS | 40.0% | |
CACGCGTGATTATGTTAAAC+TGG | - | chr3.4:40503023-40503042 | MS.gene22206:intron | 40.0% | |
CACTAGGATATTCTTTCGGT+AGG | + | chr3.4:40502789-40502808 | None:intergenic | 40.0% | |
CAGAAGAACAGATGAGTTAG+TGG | - | chr3.4:40503317-40503336 | MS.gene22206:intron | 40.0% | |
CATGAAATTGCGCCATTTGT+CGG | + | chr3.4:40505349-40505368 | None:intergenic | 40.0% | |
CCATTACAGGAACACTCATA+AGG | + | chr3.4:40504838-40504857 | None:intergenic | 40.0% | |
CCTAAATCAGCCAAAACAAC+TGG | + | chr3.4:40503799-40503818 | None:intergenic | 40.0% | |
CCTTATGAGTGTTCCTGTAA+TGG | - | chr3.4:40504835-40504854 | MS.gene22206:intron | 40.0% | |
CGACTTAAGTCCAAAAATCC+AGG | + | chr3.4:40504508-40504527 | None:intergenic | 40.0% | |
CGATATAGGATAGCAAAGTC+GGG | - | chr3.4:40504058-40504077 | MS.gene22206:intron | 40.0% | |
CTGAAATGTAACCTGCAAGT+GGG | + | chr3.4:40503879-40503898 | None:intergenic | 40.0% | |
GAGATGTAAGAACTCAAAGG+AGG | - | chr3.4:40502068-40502087 | MS.gene22206:CDS | 40.0% | |
GGAAACTTGAGACCACATTT+CGG | + | chr3.4:40502768-40502787 | None:intergenic | 40.0% | |
GGACTTTACTTCAAGTCGAA+AGG | - | chr3.4:40503964-40503983 | MS.gene22206:intron | 40.0% | |
GTATGACACACATATAAGGG+TGG | - | chr3.4:40503661-40503680 | MS.gene22206:intron | 40.0% | |
GTTCTTCTTTGGGTGAATTG+TGG | - | chr3.4:40502004-40502023 | MS.gene22206:CDS | 40.0% | |
TACCCTGTTGATATACAGGT+AGG | - | chr3.4:40503465-40503484 | MS.gene22206:intron | 40.0% | |
TCCAACGTCTCTAAGTATGT+TGG | + | chr3.4:40504939-40504958 | None:intergenic | 40.0% | |
TCCAAGACCCATTAAGGAAA+TGG | + | chr3.4:40502044-40502063 | None:intergenic | 40.0% | |
TCCATCTCTTCTACGAATGA+AGG | - | chr3.4:40502704-40502723 | MS.gene22206:CDS | 40.0% | |
TCGTCTTATAGTGCTAGAAG+AGG | - | chr3.4:40505249-40505268 | MS.gene22206:intron | 40.0% | |
TGAAATCCGTTCAAAATCGC+AGG | + | chr3.4:40504407-40504426 | None:intergenic | 40.0% | |
TGAAGGTGATTTCACCAATG+GGG | - | chr3.4:40502261-40502280 | MS.gene22206:CDS | 40.0% | |
! | ATTTCCTTAATGGGTCTTGG+AGG | - | chr3.4:40502043-40502062 | MS.gene22206:CDS | 40.0% |
! | GTCGCAAAAACCTGGATTTT+TGG | - | chr3.4:40504495-40504514 | MS.gene22206:intron | 40.0% |
! | TCTGAAATGTAACCTGCAAG+TGG | + | chr3.4:40503880-40503899 | None:intergenic | 40.0% |
! | TGGATGATTGTAGTGTCACT+AGG | + | chr3.4:40502805-40502824 | None:intergenic | 40.0% |
! | TTTTCCTACATAAGCCCGTT+TGG | + | chr3.4:40505526-40505545 | None:intergenic | 40.0% |
!! | TCTGTTGAAGCTTTGGATTG+TGG | + | chr3.4:40504869-40504888 | None:intergenic | 40.0% |
!! | TGCCTTTTGGTTGATTCTAG+TGG | - | chr3.4:40502534-40502553 | MS.gene22206:intron | 40.0% |
!!! | CCAGTTGTTTTGGCTGATTT+AGG | - | chr3.4:40503796-40503815 | MS.gene22206:intron | 40.0% |
!!! | CTGTTTTTGGGACTTTGCTA+GGG | - | chr3.4:40504447-40504466 | MS.gene22206:intron | 40.0% |
!!! | GTTTTTTGATGAGGCAGAGA+AGG | - | chr3.4:40505395-40505414 | MS.gene22206:CDS | 40.0% |
AACAGCAAAGATGCCCAAAC+AGG | + | chr3.4:40505453-40505472 | None:intergenic | 45.0% | |
AAGCACTTGTGCTAGACATG+TGG | - | chr3.4:40505071-40505090 | MS.gene22206:intron | 45.0% | |
ACATGTCTAGCACAAGTGCT+TGG | + | chr3.4:40505072-40505091 | None:intergenic | 45.0% | |
AGAGTGGTCAGTTTCTACTG+AGG | + | chr3.4:40503276-40503295 | None:intergenic | 45.0% | |
AGCAAGTAGATGGCCTGTTT+GGG | - | chr3.4:40505437-40505456 | MS.gene22206:CDS | 45.0% | |
AGCTCAGTTCAGCAAGTAGA+TGG | - | chr3.4:40505427-40505446 | MS.gene22206:CDS | 45.0% | |
AGTGCTTGGTATGGAAAGTG+TGG | + | chr3.4:40505058-40505077 | None:intergenic | 45.0% | |
CAAGATGAATTGGCACAAGC+TGG | - | chr3.4:40505288-40505307 | MS.gene22206:CDS | 45.0% | |
CATACCGTAAATGGCCCATA+TGG | + | chr3.4:40503196-40503215 | None:intergenic | 45.0% | |
CCTAGCAAAGTCCCAAAAAC+AGG | + | chr3.4:40504449-40504468 | None:intergenic | 45.0% | |
CTAGCACTATAAGACGACCA+TGG | + | chr3.4:40505246-40505265 | None:intergenic | 45.0% | |
GACCGATGATTGTTCCAGTT+AGG | + | chr3.4:40502643-40502662 | None:intergenic | 45.0% | |
GAGCATCTACAATGCTGCAT+TGG | - | chr3.4:40504889-40504908 | MS.gene22206:intron | 45.0% | |
GATGCTCTCTGTTGAAGCTT+TGG | + | chr3.4:40504876-40504895 | None:intergenic | 45.0% | |
GCTCTTGGAATAGCAACGTT+TGG | - | chr3.4:40505573-40505592 | MS.gene22206:CDS | 45.0% | |
GCTTGTGCCAATTCATCTTG+CGG | + | chr3.4:40505288-40505307 | None:intergenic | 45.0% | |
GTACCTTCCGCAAGATGAAT+TGG | - | chr3.4:40505278-40505297 | MS.gene22206:CDS | 45.0% | |
TACAAGATCCTCAGAGGAGA+GGG | - | chr3.4:40502147-40502166 | MS.gene22206:CDS | 45.0% | |
TACGCAAAGTCGCAAAAACC+TGG | - | chr3.4:40504487-40504506 | MS.gene22206:intron | 45.0% | |
TACTATGTTGCTGGGACAGT+GGG | - | chr3.4:40504812-40504831 | MS.gene22206:intron | 45.0% | |
TCGAAAGGGAGTAGCGAAAT+CGG | - | chr3.4:40503979-40503998 | MS.gene22206:intron | 45.0% | |
TCTAGCACAAGTGCTTGGTA+TGG | + | chr3.4:40505067-40505086 | None:intergenic | 45.0% | |
TCTTCCTCCAAGACCCATTA+AGG | + | chr3.4:40502050-40502069 | None:intergenic | 45.0% | |
TCTTTGTTCCCATCTGTCCA+AGG | + | chr3.4:40503376-40503395 | None:intergenic | 45.0% | |
TGAACCTACAAGATCCTCAG+AGG | - | chr3.4:40502141-40502160 | MS.gene22206:CDS | 45.0% | |
TGCTTCACACATCACACCAA+AGG | - | chr3.4:40503350-40503369 | MS.gene22206:intron | 45.0% | |
! | GCCATTTCCTTAATGGGTCT+TGG | - | chr3.4:40502040-40502059 | MS.gene22206:CDS | 45.0% |
! | GGCTTCTCTAATGTGGATTG+TGG | - | chr3.4:40503249-40503268 | MS.gene22206:intron | 45.0% |
! | GGTGTGATGTGTGAAGCATT+AGG | + | chr3.4:40503348-40503367 | None:intergenic | 45.0% |
! | GTTCGATGTGATGGAGTGTA+AGG | - | chr3.4:40503908-40503927 | MS.gene22206:intron | 45.0% |
! | GTTGCTATTCCAAGAGCAAC+AGG | + | chr3.4:40505570-40505589 | None:intergenic | 45.0% |
! | TACAATGCTGCATTGGCACT+TGG | - | chr3.4:40504896-40504915 | MS.gene22206:intron | 45.0% |
! | TGTGGTTCTATCCCCATTAC+AGG | + | chr3.4:40504851-40504870 | None:intergenic | 45.0% |
! | TTCACCAAACGGGCTTATGT+AGG | - | chr3.4:40505519-40505538 | MS.gene22206:CDS | 45.0% |
! | TTGTCACTTCCTGTTGCTCT+TGG | - | chr3.4:40505558-40505577 | MS.gene22206:CDS | 45.0% |
!! | GGGCATCTTTGCTGTTGTAT+AGG | - | chr3.4:40505457-40505476 | MS.gene22206:CDS | 45.0% |
!!! | CCTGTTTTTGGGACTTTGCT+AGG | - | chr3.4:40504446-40504465 | MS.gene22206:intron | 45.0% |
ACACATCACACCAAAGGCCT+TGG | - | chr3.4:40503356-40503375 | MS.gene22206:intron | 50.0% | |
ACCAAAGGCCTTGGACAGAT+GGG | - | chr3.4:40503365-40503384 | MS.gene22206:intron | 50.0% | |
CAGCAAGTAGATGGCCTGTT+TGG | - | chr3.4:40505436-40505455 | MS.gene22206:CDS | 50.0% | |
CATGATTGAAGGGATGAGGC+TGG | - | chr3.4:40504739-40504758 | MS.gene22206:intron | 50.0% | |
CGAAAGGGAGTAGCGAAATC+GGG | - | chr3.4:40503980-40503999 | MS.gene22206:intron | 50.0% | |
CTACAAGATCCTCAGAGGAG+AGG | - | chr3.4:40502146-40502165 | MS.gene22206:CDS | 50.0% | |
CTACTATGTTGCTGGGACAG+TGG | - | chr3.4:40504811-40504830 | MS.gene22206:intron | 50.0% | |
GAGGCAGAGTAACCGACAAA+TGG | - | chr3.4:40505334-40505353 | MS.gene22206:CDS | 50.0% | |
GTGCCAATTCATCTTGCGGA+AGG | + | chr3.4:40505284-40505303 | None:intergenic | 50.0% | |
TTCATACACCCTCTCCTCTG+AGG | + | chr3.4:40502158-40502177 | None:intergenic | 50.0% | |
! | AGAGGAGAGGGTGTATGAAG+TGG | - | chr3.4:40502159-40502178 | MS.gene22206:CDS | 50.0% |
! | CTCTCCTCTGAGGATCTTGT+AGG | + | chr3.4:40502148-40502167 | None:intergenic | 50.0% |
! | GAAGCAAGCAGCTCTAGTGA+AGG | - | chr3.4:40502186-40502205 | MS.gene22206:CDS | 50.0% |
CACCAAAGGCCTTGGACAGA+TGG | - | chr3.4:40503364-40503383 | MS.gene22206:intron | 55.0% | |
TCCCATCTGTCCAAGGCCTT+TGG | + | chr3.4:40503369-40503388 | None:intergenic | 55.0% | |
TGGGACTCACACCCACTTGC+AGG | - | chr3.4:40503865-40503884 | MS.gene22206:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 40501995 | 40505629 | 40501995 | ID=MS.gene22206 |
chr3.4 | mRNA | 40501995 | 40505629 | 40501995 | ID=MS.gene22206.t1;Parent=MS.gene22206 |
chr3.4 | exon | 40505272 | 40505629 | 40505272 | ID=MS.gene22206.t1.exon1;Parent=MS.gene22206.t1 |
chr3.4 | CDS | 40505272 | 40505629 | 40505272 | ID=cds.MS.gene22206.t1;Parent=MS.gene22206.t1 |
chr3.4 | exon | 40504414 | 40504464 | 40504414 | ID=MS.gene22206.t1.exon2;Parent=MS.gene22206.t1 |
chr3.4 | CDS | 40504414 | 40504464 | 40504414 | ID=cds.MS.gene22206.t1;Parent=MS.gene22206.t1 |
chr3.4 | exon | 40504142 | 40504314 | 40504142 | ID=MS.gene22206.t1.exon3;Parent=MS.gene22206.t1 |
chr3.4 | CDS | 40504142 | 40504314 | 40504142 | ID=cds.MS.gene22206.t1;Parent=MS.gene22206.t1 |
chr3.4 | exon | 40502661 | 40502896 | 40502661 | ID=MS.gene22206.t1.exon4;Parent=MS.gene22206.t1 |
chr3.4 | CDS | 40502661 | 40502896 | 40502661 | ID=cds.MS.gene22206.t1;Parent=MS.gene22206.t1 |
chr3.4 | exon | 40501995 | 40502364 | 40501995 | ID=MS.gene22206.t1.exon5;Parent=MS.gene22206.t1 |
chr3.4 | CDS | 40501995 | 40502364 | 40501995 | ID=cds.MS.gene22206.t1;Parent=MS.gene22206.t1 |
Gene Sequence |
Protein sequence |