Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66460.t1 | XP_024631841.1 | 95.4 | 194 | 7 | 2 | 2 | 195 | 1 | 192 | 2.70E-99 | 371.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66460.t1 | Q6Z1Y6 | 61.4 | 140 | 51 | 2 | 50 | 187 | 50 | 188 | 5.6e-45 | 182.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66460.t1 | G7ICB6 | 95.4 | 194 | 7 | 2 | 2 | 195 | 1 | 192 | 2.0e-99 | 371.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene66460.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene66460 | 0.843748 | 1.16E-58 | -1.69E-46 |
| MS.gene049171 | MS.gene66460 | 0.884175 | 2.40E-71 | -1.69E-46 |
| MS.gene049173 | MS.gene66460 | 0.87347 | 1.43E-67 | -1.69E-46 |
| MS.gene049217 | MS.gene66460 | 0.912738 | 1.38E-83 | -1.69E-46 |
| MS.gene049222 | MS.gene66460 | 0.915652 | 4.56E-85 | -1.69E-46 |
| MS.gene049232 | MS.gene66460 | 0.848416 | 6.22E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene66460 | 0.917017 | 8.85E-86 | -1.69E-46 |
| MS.gene049320 | MS.gene66460 | 0.918436 | 1.56E-86 | -1.69E-46 |
| MS.gene049356 | MS.gene66460 | 0.813449 | 2.55E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene66460 | 0.835249 | 1.87E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene66460 | 0.822999 | 1.75E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene66460 | -0.802563 | 5.29E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene66460 | 0.851951 | 6.35E-61 | -1.69E-46 |
| MS.gene049609 | MS.gene66460 | 0.899343 | 2.18E-77 | -1.69E-46 |
| MS.gene049611 | MS.gene66460 | -0.80937 | 1.96E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene66460 | 0.875429 | 3.10E-68 | -1.69E-46 |
| MS.gene049634 | MS.gene66460 | -0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene049661 | MS.gene66460 | 0.802371 | 5.79E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene66460 | 0.890641 | 8.20E-74 | -1.69E-46 |
| MS.gene050076 | MS.gene66460 | 0.808283 | 3.34E-50 | -1.69E-46 |
| MS.gene050083 | MS.gene66460 | -0.800563 | 1.36E-48 | -1.69E-46 |
| MS.gene05010 | MS.gene66460 | 0.852069 | 5.88E-61 | -1.69E-46 |
| MS.gene050163 | MS.gene66460 | 0.897701 | 1.09E-76 | -1.69E-46 |
| MS.gene050165 | MS.gene66460 | 0.887059 | 1.99E-72 | -1.69E-46 |
| MS.gene050216 | MS.gene66460 | 0.832791 | 7.73E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene66460 | 0.844969 | 5.44E-59 | -1.69E-46 |
| MS.gene050333 | MS.gene66460 | 0.883973 | 2.85E-71 | -1.69E-46 |
| MS.gene050353 | MS.gene66460 | -0.807795 | 4.24E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene66460 | -0.813301 | 2.74E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene66460 | -0.829048 | 6.40E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene66460 | 0.857604 | 1.46E-62 | -1.69E-46 |
| MS.gene050444 | MS.gene66460 | 0.855927 | 4.54E-62 | -1.69E-46 |
| MS.gene050496 | MS.gene66460 | 0.801372 | 9.29E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene66460 | 0.889328 | 2.67E-73 | -1.69E-46 |
| MS.gene050518 | MS.gene66460 | 0.902471 | 9.37E-79 | -1.69E-46 |
| MS.gene050520 | MS.gene66460 | 0.828203 | 1.02E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene66460 | 0.8711 | 8.83E-67 | -1.69E-46 |
| MS.gene050577 | MS.gene66460 | 0.863349 | 2.65E-64 | -1.69E-46 |
| MS.gene050593 | MS.gene66460 | 0.86383 | 1.88E-64 | -1.69E-46 |
| MS.gene050612 | MS.gene66460 | 0.896436 | 3.70E-76 | -1.69E-46 |
| MS.gene050662 | MS.gene66460 | 0.858565 | 7.55E-63 | -1.69E-46 |
| MS.gene050670 | MS.gene66460 | 0.80786 | 4.11E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene66460 | 0.876116 | 1.80E-68 | -1.69E-46 |
| MS.gene050686 | MS.gene66460 | 0.873348 | 1.58E-67 | -1.69E-46 |
| MS.gene050690 | MS.gene66460 | 0.809712 | 1.65E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene66460 | 0.884782 | 1.43E-71 | -1.69E-46 |
| MS.gene050747 | MS.gene66460 | 0.883584 | 3.97E-71 | -1.69E-46 |
| MS.gene050767 | MS.gene66460 | 0.843381 | 1.45E-58 | -1.69E-46 |
| MS.gene050770 | MS.gene66460 | 0.844868 | 5.79E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene66460 | 0.925608 | 1.46E-90 | -1.69E-46 |
| MS.gene05079 | MS.gene66460 | -0.800211 | 1.60E-48 | -1.69E-46 |
| MS.gene050809 | MS.gene66460 | -0.805459 | 1.32E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene66460 | 0.89342 | 6.39E-75 | -1.69E-46 |
| MS.gene05081 | MS.gene66460 | 0.822631 | 2.14E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene66460 | 0.866714 | 2.33E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene66460 | 0.864953 | 8.39E-65 | -1.69E-46 |
| MS.gene050950 | MS.gene66460 | 0.875108 | 3.99E-68 | -1.69E-46 |
| MS.gene050986 | MS.gene66460 | 0.866288 | 3.18E-65 | -1.69E-46 |
| MS.gene05100 | MS.gene66460 | 0.876001 | 1.98E-68 | -1.69E-46 |
| MS.gene05104 | MS.gene66460 | -0.813805 | 2.13E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene66460 | 0.856769 | 2.57E-62 | -1.69E-46 |
| MS.gene051167 | MS.gene66460 | -0.827447 | 1.56E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene66460 | 0.882445 | 1.04E-70 | -1.69E-46 |
| MS.gene051268 | MS.gene66460 | 0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene051317 | MS.gene66460 | 0.827937 | 1.19E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene66460 | 0.843375 | 1.46E-58 | -1.69E-46 |
| MS.gene051509 | MS.gene66460 | 0.80424 | 2.38E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene66460 | 0.863167 | 3.02E-64 | -1.69E-46 |
| MS.gene051617 | MS.gene66460 | 0.836712 | 7.97E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene66460 | 0.902127 | 1.33E-78 | -1.69E-46 |
| MS.gene051692 | MS.gene66460 | 0.854555 | 1.14E-61 | -1.69E-46 |
| MS.gene051694 | MS.gene66460 | 0.85581 | 4.91E-62 | -1.69E-46 |
| MS.gene051734 | MS.gene66460 | 0.827267 | 1.72E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene66460 | 0.904141 | 1.67E-79 | -1.69E-46 |
| MS.gene051838 | MS.gene66460 | 0.836076 | 1.16E-56 | -1.69E-46 |
| MS.gene051858 | MS.gene66460 | 0.893168 | 8.08E-75 | -1.69E-46 |
| MS.gene051874 | MS.gene66460 | 0.840948 | 6.39E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene66460 | 0.857181 | 1.94E-62 | -1.69E-46 |
| MS.gene052164 | MS.gene66460 | 0.860927 | 1.47E-63 | -1.69E-46 |
| MS.gene052271 | MS.gene66460 | 0.88668 | 2.77E-72 | -1.69E-46 |
| MS.gene052290 | MS.gene66460 | 0.841148 | 5.66E-58 | -1.69E-46 |
| MS.gene052379 | MS.gene66460 | 0.891444 | 3.95E-74 | -1.69E-46 |
| MS.gene052421 | MS.gene66460 | 0.835144 | 1.99E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene66460 | 0.813884 | 2.04E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene66460 | 0.834286 | 3.27E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene66460 | 0.860186 | 2.46E-63 | -1.69E-46 |
| MS.gene052485 | MS.gene66460 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene66460 | 0.835731 | 1.41E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene66460 | 0.813826 | 2.10E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene66460 | 0.848313 | 6.64E-60 | -1.69E-46 |
| MS.gene052505 | MS.gene66460 | 0.800943 | 1.14E-48 | -1.69E-46 |
| MS.gene052506 | MS.gene66460 | 0.855649 | 5.48E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene66460 | 0.889964 | 1.51E-73 | -1.69E-46 |
| MS.gene052670 | MS.gene66460 | 0.817582 | 3.06E-52 | -1.69E-46 |
| MS.gene052805 | MS.gene66460 | -0.806288 | 8.85E-50 | -1.69E-46 |
| MS.gene052820 | MS.gene66460 | 0.809897 | 1.51E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene66460 | 0.8622 | 6.00E-64 | -1.69E-46 |
| MS.gene052823 | MS.gene66460 | 0.838864 | 2.23E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene66460 | 0.836445 | 9.32E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene66460 | 0.858573 | 7.51E-63 | -1.69E-46 |
| MS.gene052872 | MS.gene66460 | 0.866722 | 2.32E-65 | -1.69E-46 |
| MS.gene052916 | MS.gene66460 | 0.877451 | 6.22E-69 | -1.69E-46 |
| MS.gene052966 | MS.gene66460 | 0.837884 | 3.99E-57 | -1.69E-46 |
| MS.gene053009 | MS.gene66460 | 0.871723 | 5.50E-67 | -1.69E-46 |
| MS.gene053018 | MS.gene66460 | 0.815266 | 1.01E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene66460 | 0.865307 | 6.49E-65 | -1.69E-46 |
| MS.gene053104 | MS.gene66460 | 0.908084 | 2.52E-81 | -1.69E-46 |
| MS.gene053107 | MS.gene66460 | 0.823855 | 1.11E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene66460 | 0.851763 | 7.18E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene66460 | 0.896453 | 3.63E-76 | -1.69E-46 |
| MS.gene053209 | MS.gene66460 | 0.800519 | 1.39E-48 | -1.69E-46 |
| MS.gene053213 | MS.gene66460 | 0.911711 | 4.46E-83 | -1.69E-46 |
| MS.gene053286 | MS.gene66460 | 0.907186 | 6.65E-81 | -1.69E-46 |
| MS.gene053322 | MS.gene66460 | 0.893859 | 4.25E-75 | -1.69E-46 |
| MS.gene053384 | MS.gene66460 | 0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene66460 | -0.817714 | 2.86E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene66460 | 0.847938 | 8.42E-60 | -1.69E-46 |
| MS.gene053449 | MS.gene66460 | 0.838153 | 3.40E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene66460 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene66460 | 0.824417 | 8.16E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene66460 | -0.832293 | 1.03E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene66460 | 0.902293 | 1.12E-78 | -1.69E-46 |
| MS.gene053579 | MS.gene66460 | 0.814591 | 1.43E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene66460 | 0.852697 | 3.89E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene66460 | 0.922514 | 8.90E-89 | -1.69E-46 |
| MS.gene053813 | MS.gene66460 | 0.825542 | 4.43E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene66460 | 0.877173 | 7.77E-69 | -1.69E-46 |
| MS.gene053912 | MS.gene66460 | 0.815453 | 9.17E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene66460 | 0.919031 | 7.48E-87 | -1.69E-46 |
| MS.gene054003 | MS.gene66460 | 0.846214 | 2.50E-59 | -1.69E-46 |
| MS.gene054376 | MS.gene66460 | 0.816137 | 6.46E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene66460 | 0.850792 | 1.35E-60 | -1.69E-46 |
| MS.gene054543 | MS.gene66460 | 0.819066 | 1.41E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene66460 | 0.869244 | 3.58E-66 | -1.69E-46 |
| MS.gene054600 | MS.gene66460 | 0.893453 | 6.20E-75 | -1.69E-46 |
| MS.gene054642 | MS.gene66460 | 0.943686 | 7.68E-103 | -1.69E-46 |
| MS.gene054706 | MS.gene66460 | -0.823359 | 1.45E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene66460 | 0.818447 | 1.95E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene66460 | 0.825009 | 5.92E-54 | -1.69E-46 |
| MS.gene054803 | MS.gene66460 | 0.825261 | 5.16E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene66460 | 0.827491 | 1.52E-54 | -1.69E-46 |
| MS.gene054927 | MS.gene66460 | 0.853152 | 2.89E-61 | -1.69E-46 |
| MS.gene05494 | MS.gene66460 | 0.831278 | 1.83E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene66460 | 0.886259 | 4.00E-72 | -1.69E-46 |
| MS.gene054955 | MS.gene66460 | 0.805512 | 1.29E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene66460 | 0.895897 | 6.19E-76 | -1.69E-46 |
| MS.gene055154 | MS.gene66460 | -0.843759 | 1.15E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene66460 | 0.909732 | 4.11E-82 | -1.69E-46 |
| MS.gene055212 | MS.gene66460 | 0.872497 | 3.04E-67 | -1.69E-46 |
| MS.gene055224 | MS.gene66460 | 0.85477 | 9.86E-62 | -1.69E-46 |
| MS.gene055254 | MS.gene66460 | 0.802761 | 4.81E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene66460 | 0.880293 | 6.19E-70 | -1.69E-46 |
| MS.gene055362 | MS.gene66460 | 0.903397 | 3.62E-79 | -1.69E-46 |
| MS.gene055397 | MS.gene66460 | 0.874972 | 4.44E-68 | -1.69E-46 |
| MS.gene055412 | MS.gene66460 | 0.807489 | 4.93E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene66460 | 0.859389 | 4.28E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene66460 | 0.910943 | 1.06E-82 | -1.69E-46 |
| MS.gene055577 | MS.gene66460 | 0.899356 | 2.15E-77 | -1.69E-46 |
| MS.gene055634 | MS.gene66460 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene66460 | 0.858055 | 1.07E-62 | -1.69E-46 |
| MS.gene055638 | MS.gene66460 | 0.864426 | 1.23E-64 | -1.69E-46 |
| MS.gene055647 | MS.gene66460 | 0.873451 | 1.46E-67 | -1.69E-46 |
| MS.gene055722 | MS.gene66460 | 0.913142 | 8.67E-84 | -1.69E-46 |
| MS.gene055748 | MS.gene66460 | 0.852159 | 5.54E-61 | -1.69E-46 |
| MS.gene055750 | MS.gene66460 | 0.862929 | 3.58E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene66460 | 0.850333 | 1.82E-60 | -1.69E-46 |
| MS.gene055776 | MS.gene66460 | 0.823354 | 1.45E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene66460 | 0.822824 | 1.93E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene66460 | 0.912679 | 1.48E-83 | -1.69E-46 |
| MS.gene055941 | MS.gene66460 | 0.896212 | 4.58E-76 | -1.69E-46 |
| MS.gene055956 | MS.gene66460 | -0.837154 | 6.14E-57 | -1.69E-46 |
| MS.gene056046 | MS.gene66460 | 0.80321 | 3.89E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene66460 | 0.853755 | 1.94E-61 | -1.69E-46 |
| MS.gene056166 | MS.gene66460 | 0.811629 | 6.36E-51 | -1.69E-46 |
| MS.gene056359 | MS.gene66460 | -0.811104 | 8.27E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene66460 | 0.897553 | 1.26E-76 | -1.69E-46 |
| MS.gene056409 | MS.gene66460 | 0.817309 | 3.53E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene66460 | 0.845093 | 5.04E-59 | -1.69E-46 |
| MS.gene056446 | MS.gene66460 | 0.832965 | 6.99E-56 | -1.69E-46 |
| MS.gene056448 | MS.gene66460 | 0.84491 | 5.64E-59 | -1.69E-46 |
| MS.gene056449 | MS.gene66460 | 0.834468 | 2.95E-56 | -1.69E-46 |
| MS.gene056487 | MS.gene66460 | 0.87274 | 2.52E-67 | -1.69E-46 |
| MS.gene056504 | MS.gene66460 | 0.865123 | 7.42E-65 | -1.69E-46 |
| MS.gene056510 | MS.gene66460 | 0.884428 | 1.93E-71 | -1.69E-46 |
| MS.gene056511 | MS.gene66460 | 0.848373 | 6.39E-60 | -1.69E-46 |
| MS.gene056549 | MS.gene66460 | 0.849492 | 3.12E-60 | -1.69E-46 |
| MS.gene056609 | MS.gene66460 | 0.833774 | 4.40E-56 | -1.69E-46 |
| MS.gene056610 | MS.gene66460 | 0.811004 | 8.70E-51 | -1.69E-46 |
| MS.gene05664 | MS.gene66460 | 0.817703 | 2.87E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene66460 | 0.927805 | 7.03E-92 | -1.69E-46 |
| MS.gene05666 | MS.gene66460 | 0.815959 | 7.08E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene66460 | 0.845736 | 3.37E-59 | -1.69E-46 |
| MS.gene056897 | MS.gene66460 | 0.845249 | 4.57E-59 | -1.69E-46 |
| MS.gene056898 | MS.gene66460 | 0.811068 | 8.42E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene66460 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene056947 | MS.gene66460 | 0.834414 | 3.04E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene66460 | 0.848885 | 4.61E-60 | -1.69E-46 |
| MS.gene057076 | MS.gene66460 | 0.890012 | 1.45E-73 | -1.69E-46 |
| MS.gene057086 | MS.gene66460 | 0.830442 | 2.93E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene66460 | 0.913593 | 5.14E-84 | -1.69E-46 |
| MS.gene057146 | MS.gene66460 | 0.866204 | 3.38E-65 | -1.69E-46 |
| MS.gene057246 | MS.gene66460 | 0.828517 | 8.61E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene66460 | 0.871288 | 7.66E-67 | -1.69E-46 |
| MS.gene05735 | MS.gene66460 | 0.847608 | 1.04E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene66460 | 0.903909 | 2.13E-79 | -1.69E-46 |
| MS.gene057658 | MS.gene66460 | 0.834055 | 3.74E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene66460 | 0.858917 | 5.92E-63 | -1.69E-46 |
| MS.gene057831 | MS.gene66460 | 0.847173 | 1.37E-59 | -1.69E-46 |
| MS.gene057856 | MS.gene66460 | 0.820495 | 6.66E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene66460 | 0.818765 | 1.65E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene66460 | 0.814126 | 1.81E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene66460 | 0.891434 | 3.99E-74 | -1.69E-46 |
| MS.gene058006 | MS.gene66460 | 0.839186 | 1.84E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene66460 | 0.869657 | 2.63E-66 | -1.69E-46 |
| MS.gene058130 | MS.gene66460 | 0.874369 | 7.13E-68 | -1.69E-46 |
| MS.gene058293 | MS.gene66460 | 0.829992 | 3.77E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene66460 | 0.859445 | 4.12E-63 | -1.69E-46 |
| MS.gene058338 | MS.gene66460 | 0.856982 | 2.23E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene66460 | 0.859999 | 2.80E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene66460 | 0.930767 | 1.01E-93 | -1.69E-46 |
| MS.gene058459 | MS.gene66460 | 0.819729 | 9.97E-53 | -1.69E-46 |
| MS.gene058544 | MS.gene66460 | 0.878638 | 2.39E-69 | -1.69E-46 |
| MS.gene058660 | MS.gene66460 | 0.816621 | 5.03E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene66460 | 0.896832 | 2.53E-76 | -1.69E-46 |
| MS.gene058773 | MS.gene66460 | 0.881054 | 3.30E-70 | -1.69E-46 |
| MS.gene058838 | MS.gene66460 | 0.85468 | 1.05E-61 | -1.69E-46 |
| MS.gene05883 | MS.gene66460 | 0.828064 | 1.11E-54 | -1.69E-46 |
| MS.gene058840 | MS.gene66460 | -0.837705 | 4.44E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene66460 | 0.887649 | 1.19E-72 | -1.69E-46 |
| MS.gene059023 | MS.gene66460 | 0.876655 | 1.17E-68 | -1.69E-46 |
| MS.gene059029 | MS.gene66460 | 0.887852 | 9.91E-73 | -1.69E-46 |
| MS.gene059079 | MS.gene66460 | 0.807115 | 5.92E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene66460 | 0.892538 | 1.45E-74 | -1.69E-46 |
| MS.gene059305 | MS.gene66460 | 0.809594 | 1.75E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene66460 | 0.889972 | 1.50E-73 | -1.69E-46 |
| MS.gene059366 | MS.gene66460 | 0.808868 | 2.51E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene66460 | 0.872271 | 3.61E-67 | -1.69E-46 |
| MS.gene059368 | MS.gene66460 | 0.856416 | 3.27E-62 | -1.69E-46 |
| MS.gene059455 | MS.gene66460 | 0.824412 | 8.19E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene66460 | 0.87771 | 5.05E-69 | -1.69E-46 |
| MS.gene059667 | MS.gene66460 | 0.816414 | 5.60E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene66460 | 0.804427 | 2.17E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene66460 | 0.902864 | 6.26E-79 | -1.69E-46 |
| MS.gene059688 | MS.gene66460 | 0.829118 | 6.15E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene66460 | 0.817906 | 2.59E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene66460 | 0.822407 | 2.41E-53 | -1.69E-46 |
| MS.gene059699 | MS.gene66460 | -0.817651 | 2.95E-52 | -1.69E-46 |
| MS.gene059703 | MS.gene66460 | -0.819244 | 1.29E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene66460 | 0.846196 | 2.53E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene66460 | 0.91189 | 3.64E-83 | -1.69E-46 |
| MS.gene059756 | MS.gene66460 | 0.848795 | 4.88E-60 | -1.69E-46 |
| MS.gene059801 | MS.gene66460 | 0.840009 | 1.13E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene66460 | 0.881239 | 2.83E-70 | -1.69E-46 |
| MS.gene059902 | MS.gene66460 | 0.888665 | 4.83E-73 | -1.69E-46 |
| MS.gene059960 | MS.gene66460 | 0.880248 | 6.42E-70 | -1.69E-46 |
| MS.gene060193 | MS.gene66460 | 0.857146 | 1.99E-62 | -1.69E-46 |
| MS.gene060341 | MS.gene66460 | 0.834669 | 2.62E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene66460 | 0.876144 | 1.76E-68 | -1.69E-46 |
| MS.gene060703 | MS.gene66460 | 0.867179 | 1.66E-65 | -1.69E-46 |
| MS.gene060727 | MS.gene66460 | 0.818371 | 2.03E-52 | -1.69E-46 |
| MS.gene060728 | MS.gene66460 | 0.846111 | 2.67E-59 | -1.69E-46 |
| MS.gene06074 | MS.gene66460 | -0.806992 | 6.28E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene66460 | 0.881991 | 1.51E-70 | -1.69E-46 |
| MS.gene060778 | MS.gene66460 | 0.820936 | 5.27E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene66460 | 0.859159 | 5.02E-63 | -1.69E-46 |
| MS.gene060804 | MS.gene66460 | 0.911408 | 6.29E-83 | -1.69E-46 |
| MS.gene060818 | MS.gene66460 | 0.890694 | 7.82E-74 | -1.69E-46 |
| MS.gene060835 | MS.gene66460 | 0.880483 | 5.29E-70 | -1.69E-46 |
| MS.gene060837 | MS.gene66460 | 0.874398 | 6.97E-68 | -1.69E-46 |
| MS.gene06092 | MS.gene66460 | 0.889146 | 3.15E-73 | -1.69E-46 |
| MS.gene06097 | MS.gene66460 | 0.817683 | 2.90E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene66460 | 0.852243 | 5.24E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene66460 | 0.902337 | 1.07E-78 | -1.69E-46 |
| MS.gene061051 | MS.gene66460 | -0.820731 | 5.88E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene66460 | 0.844201 | 8.76E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene66460 | 0.877943 | 4.19E-69 | -1.69E-46 |
| MS.gene061171 | MS.gene66460 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene66460 | 0.898556 | 4.73E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66460.t1 | MTR_1g018030 | 95.361 | 194 | 7 | 2 | 2 | 195 | 1 | 192 | 2.91e-135 | 376 |
| MS.gene66460.t1 | MTR_7g073990 | 42.953 | 149 | 74 | 2 | 47 | 187 | 97 | 242 | 1.69e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66460.t1 | AT1G26220 | 61.386 | 202 | 65 | 5 | 2 | 195 | 1 | 197 | 2.53e-79 | 235 |
| MS.gene66460.t1 | AT1G32070 | 41.985 | 131 | 60 | 1 | 76 | 190 | 127 | 257 | 6.73e-29 | 108 |
| MS.gene66460.t1 | AT1G32070 | 40.909 | 132 | 61 | 1 | 76 | 190 | 126 | 257 | 6.24e-28 | 105 |
| MS.gene66460.t1 | AT1G32070 | 40.909 | 132 | 61 | 1 | 76 | 190 | 127 | 258 | 6.37e-28 | 105 |
Find 50 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACTTTGTTAAGTGCTTCT+AGG | 0.216082 | 1.4:+4948751 | None:intergenic |
| TACTCTGAGCCAAGAGTTCT+TGG | 0.233326 | 1.4:-4948465 | MS.gene66460:CDS |
| AACAACAACATCCCATATTA+TGG | 0.310068 | 1.4:+4948581 | None:intergenic |
| GTTGTTGATCCTTCGTTTCA+AGG | 0.353170 | 1.4:-4948564 | MS.gene66460:CDS |
| CTCAGAGTAAAGAGCAATAT+TGG | 0.361910 | 1.4:+4948479 | None:intergenic |
| GATCCTTCGTTTCAAGGGCT+TGG | 0.366151 | 1.4:-4948558 | MS.gene66460:CDS |
| TCGTTTCAAGGGCTTGGACT+AGG | 0.403696 | 1.4:-4948552 | MS.gene66460:CDS |
| CTGTTGTCGAGAGGCTTATG+AGG | 0.408843 | 1.4:-4948524 | MS.gene66460:CDS |
| AAGTTAAGTCGTAGGGAGGA+TGG | 0.419412 | 1.4:+4948909 | None:intergenic |
| CGTTTCAAGGGCTTGGACTA+GGG | 0.426846 | 1.4:-4948551 | MS.gene66460:CDS |
| CGATAAAAGCCAAGAACTCT+TGG | 0.431331 | 1.4:+4948456 | None:intergenic |
| TAGGCTTGCTTGACAAGAAA+TGG | 0.442809 | 1.4:+4948851 | None:intergenic |
| TTGTTGATCCTTCGTTTCAA+GGG | 0.483590 | 1.4:-4948563 | MS.gene66460:CDS |
| GTTGCATTTGCAAGAGCTAC+TGG | 0.489343 | 1.4:-4948621 | MS.gene66460:CDS |
| ATTCTCCGCCGAACCGCAGA+GGG | 0.489832 | 1.4:-4948780 | MS.gene66460:CDS |
| GGTTTAACCCCTCTGCGGTT+CGG | 0.494949 | 1.4:+4948772 | None:intergenic |
| TTTGAAGAAGTTAAGTCGTA+GGG | 0.496530 | 1.4:+4948902 | None:intergenic |
| TGAGGGATCTTGTAGGAAGA+GGG | 0.520334 | 1.4:-4948506 | MS.gene66460:CDS |
| ACTCGAGCACACTGACTCAA+TGG | 0.522170 | 1.4:-4948679 | MS.gene66460:CDS |
| ATTTGAAGAAGTTAAGTCGT+AGG | 0.522993 | 1.4:+4948901 | None:intergenic |
| ATGAGGGATCTTGTAGGAAG+AGG | 0.534453 | 1.4:-4948507 | MS.gene66460:CDS |
| AGTCGTAGGGAGGATGGAAG+AGG | 0.540218 | 1.4:+4948915 | None:intergenic |
| ATATTGAGAGTGGGTAGTCT+AGG | 0.541441 | 1.4:+4948832 | None:intergenic |
| ACCATTCCACGAATACCATC+AGG | 0.547694 | 1.4:+4948411 | None:intergenic |
| AGGCTTATGAGGGATCTTGT+AGG | 0.549706 | 1.4:-4948513 | MS.gene66460:CDS |
| AGCACACTGACTCAATGGTA+TGG | 0.558828 | 1.4:-4948674 | MS.gene66460:CDS |
| ACAAAGTATTCGTAGCAGTA+GGG | 0.561588 | 1.4:-4948737 | MS.gene66460:CDS |
| TCCTGATGGTATTCGTGGAA+TGG | 0.563938 | 1.4:-4948412 | MS.gene66460:CDS |
| AAATGGTGAGGTTTCGTAGT+GGG | 0.566008 | 1.4:+4948868 | None:intergenic |
| AACAAAGTATTCGTAGCAGT+AGG | 0.566118 | 1.4:-4948738 | MS.gene66460:CDS |
| TTAACCCCTCTGCGGTTCGG+CGG | 0.568840 | 1.4:+4948775 | None:intergenic |
| GAAGAAGTTAAGTCGTAGGG+AGG | 0.570827 | 1.4:+4948905 | None:intergenic |
| GCTGATCCTGATGGTATTCG+TGG | 0.578470 | 1.4:-4948417 | MS.gene66460:CDS |
| CATTCTCCGCCGAACCGCAG+AGG | 0.581744 | 1.4:-4948781 | MS.gene66460:CDS |
| GTTTCGTCGGATATTGAGAG+TGG | 0.593105 | 1.4:+4948822 | None:intergenic |
| TTGCTTGACAAGAAATGGTG+AGG | 0.596575 | 1.4:+4948856 | None:intergenic |
| GATAATATGCTGCTCTTACG+TGG | 0.618724 | 1.4:-4948951 | None:intergenic |
| AGTCCAAGCCCTTGAAACGA+AGG | 0.624386 | 1.4:+4948555 | None:intergenic |
| TGTTGTCGAGAGGCTTATGA+GGG | 0.625783 | 1.4:-4948523 | MS.gene66460:CDS |
| TTTGCAAGAGCTACTGGTGA+TGG | 0.636078 | 1.4:-4948615 | MS.gene66460:CDS |
| TTCTAGGTTTAACCCCTCTG+CGG | 0.644451 | 1.4:+4948767 | None:intergenic |
| TTTCGTCGGATATTGAGAGT+GGG | 0.648674 | 1.4:+4948823 | None:intergenic |
| TAGGGAAAGCTGTTGTCGAG+AGG | 0.652617 | 1.4:-4948533 | MS.gene66460:CDS |
| CAATGGTATGGATACAAGAG+AGG | 0.657246 | 1.4:-4948662 | MS.gene66460:CDS |
| TCGTAGCAGTAGGGTTTCCG+CGG | 0.663293 | 1.4:-4948728 | MS.gene66460:CDS |
| GGATCAGCAACAAAACCCAA+AGG | 0.674227 | 1.4:+4948432 | None:intergenic |
| GAGGAAGTCGCAGAATAATG+CGG | 0.702415 | 1.4:-4948643 | MS.gene66460:CDS |
| GAAATGGTGAGGTTTCGTAG+TGG | 0.706232 | 1.4:+4948867 | None:intergenic |
| GACGAAACCCTAGAAAAGCG+AGG | 0.715831 | 1.4:-4948807 | MS.gene66460:CDS |
| TTCTCCGCCGAACCGCAGAG+GGG | 0.756624 | 1.4:-4948779 | MS.gene66460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTTTCAATGCCATAATAT+GGG | - | chr1.4:4948733-4948752 | MS.gene66460:CDS | 25.0% |
| AACAACAACATCCCATATTA+TGG | + | chr1.4:4948747-4948766 | None:intergenic | 30.0% | |
| ATACTTTGTTAAGTGCTTCT+AGG | + | chr1.4:4948577-4948596 | None:intergenic | 30.0% | |
| ATTTGAAGAAGTTAAGTCGT+AGG | + | chr1.4:4948427-4948446 | None:intergenic | 30.0% | |
| TTTGAAGAAGTTAAGTCGTA+GGG | + | chr1.4:4948426-4948445 | None:intergenic | 30.0% | |
| ! | GTGTTTTCAATGCCATAATA+TGG | - | chr1.4:4948732-4948751 | MS.gene66460:CDS | 30.0% |
| CTCAGAGTAAAGAGCAATAT+TGG | + | chr1.4:4948849-4948868 | None:intergenic | 35.0% | |
| TTGTTGATCCTTCGTTTCAA+GGG | - | chr1.4:4948762-4948781 | MS.gene66460:CDS | 35.0% | |
| ! | AACAAAGTATTCGTAGCAGT+AGG | - | chr1.4:4948587-4948606 | MS.gene66460:CDS | 35.0% |
| ! | ACAAAGTATTCGTAGCAGTA+GGG | - | chr1.4:4948588-4948607 | MS.gene66460:CDS | 35.0% |
| !! | AATGAAACCTCGCTTTTCTA+GGG | + | chr1.4:4948528-4948547 | None:intergenic | 35.0% |
| AAATGGTGAGGTTTCGTAGT+GGG | + | chr1.4:4948460-4948479 | None:intergenic | 40.0% | |
| ATATTGAGAGTGGGTAGTCT+AGG | + | chr1.4:4948496-4948515 | None:intergenic | 40.0% | |
| CAATGGTATGGATACAAGAG+AGG | - | chr1.4:4948663-4948682 | MS.gene66460:CDS | 40.0% | |
| CGATAAAAGCCAAGAACTCT+TGG | + | chr1.4:4948872-4948891 | None:intergenic | 40.0% | |
| GTTGTTGATCCTTCGTTTCA+AGG | - | chr1.4:4948761-4948780 | MS.gene66460:CDS | 40.0% | |
| TTGCTTGACAAGAAATGGTG+AGG | + | chr1.4:4948472-4948491 | None:intergenic | 40.0% | |
| TTTCGTCGGATATTGAGAGT+GGG | + | chr1.4:4948505-4948524 | None:intergenic | 40.0% | |
| ! | AGTGCAATGCGTATTTTCTC+AGG | + | chr1.4:4948629-4948648 | None:intergenic | 40.0% |
| ! | GTGCAATGCGTATTTTCTCA+GGG | + | chr1.4:4948628-4948647 | None:intergenic | 40.0% |
| ! | TAGGCTTGCTTGACAAGAAA+TGG | + | chr1.4:4948477-4948496 | None:intergenic | 40.0% |
| !! | CTTGGCTTTTATCGACCTTT+GGG | - | chr1.4:4948878-4948897 | MS.gene66460:CDS | 40.0% |
| !! | GAATGAAACCTCGCTTTTCT+AGG | + | chr1.4:4948529-4948548 | None:intergenic | 40.0% |
| !! | TCTTGGCTTTTATCGACCTT+TGG | - | chr1.4:4948877-4948896 | MS.gene66460:CDS | 40.0% |
| AAGTTAAGTCGTAGGGAGGA+TGG | + | chr1.4:4948419-4948438 | None:intergenic | 45.0% | |
| ACCATTCCACGAATACCATC+AGG | + | chr1.4:4948917-4948936 | None:intergenic | 45.0% | |
| AGGCTTATGAGGGATCTTGT+AGG | - | chr1.4:4948812-4948831 | MS.gene66460:CDS | 45.0% | |
| ATGAGGGATCTTGTAGGAAG+AGG | - | chr1.4:4948818-4948837 | MS.gene66460:CDS | 45.0% | |
| GAAATGGTGAGGTTTCGTAG+TGG | + | chr1.4:4948461-4948480 | None:intergenic | 45.0% | |
| GAAGAAGTTAAGTCGTAGGG+AGG | + | chr1.4:4948423-4948442 | None:intergenic | 45.0% | |
| GAGGAAGTCGCAGAATAATG+CGG | - | chr1.4:4948682-4948701 | MS.gene66460:CDS | 45.0% | |
| GGATCAGCAACAAAACCCAA+AGG | + | chr1.4:4948896-4948915 | None:intergenic | 45.0% | |
| GTTGCATTTGCAAGAGCTAC+TGG | - | chr1.4:4948704-4948723 | MS.gene66460:CDS | 45.0% | |
| GTTTCGTCGGATATTGAGAG+TGG | + | chr1.4:4948506-4948525 | None:intergenic | 45.0% | |
| TACTCTGAGCCAAGAGTTCT+TGG | - | chr1.4:4948860-4948879 | MS.gene66460:CDS | 45.0% | |
| TCCTGATGGTATTCGTGGAA+TGG | - | chr1.4:4948913-4948932 | MS.gene66460:CDS | 45.0% | |
| TGAGGGATCTTGTAGGAAGA+GGG | - | chr1.4:4948819-4948838 | MS.gene66460:CDS | 45.0% | |
| TGTTGTCGAGAGGCTTATGA+GGG | - | chr1.4:4948802-4948821 | MS.gene66460:CDS | 45.0% | |
| TTCTAGGTTTAACCCCTCTG+CGG | + | chr1.4:4948561-4948580 | None:intergenic | 45.0% | |
| TTTGCAAGAGCTACTGGTGA+TGG | - | chr1.4:4948710-4948729 | MS.gene66460:CDS | 45.0% | |
| !! | AGCACACTGACTCAATGGTA+TGG | - | chr1.4:4948651-4948670 | MS.gene66460:CDS | 45.0% |
| !!! | GGTTTTGTTGCTGATCCTGA+TGG | - | chr1.4:4948899-4948918 | MS.gene66460:CDS | 45.0% |
| !!! | TCGCTTTTCTAGGGTTTCGT+CGG | + | chr1.4:4948519-4948538 | None:intergenic | 45.0% |
| AGTCCAAGCCCTTGAAACGA+AGG | + | chr1.4:4948773-4948792 | None:intergenic | 50.0% | |
| CGTTTCAAGGGCTTGGACTA+GGG | - | chr1.4:4948774-4948793 | MS.gene66460:CDS | 50.0% | |
| CTGTTGTCGAGAGGCTTATG+AGG | - | chr1.4:4948801-4948820 | MS.gene66460:CDS | 50.0% | |
| GACGAAACCCTAGAAAAGCG+AGG | - | chr1.4:4948518-4948537 | MS.gene66460:CDS | 50.0% | |
| GATCCTTCGTTTCAAGGGCT+TGG | - | chr1.4:4948767-4948786 | MS.gene66460:CDS | 50.0% | |
| GCTGATCCTGATGGTATTCG+TGG | - | chr1.4:4948908-4948927 | MS.gene66460:CDS | 50.0% | |
| TAGGGAAAGCTGTTGTCGAG+AGG | - | chr1.4:4948792-4948811 | MS.gene66460:CDS | 50.0% | |
| TCGTTTCAAGGGCTTGGACT+AGG | - | chr1.4:4948773-4948792 | MS.gene66460:CDS | 50.0% | |
| !! | ACTCGAGCACACTGACTCAA+TGG | - | chr1.4:4948646-4948665 | MS.gene66460:CDS | 50.0% |
| AGTCGTAGGGAGGATGGAAG+AGG | + | chr1.4:4948413-4948432 | None:intergenic | 55.0% | |
| GGTTTAACCCCTCTGCGGTT+CGG | + | chr1.4:4948556-4948575 | None:intergenic | 55.0% | |
| TCGTAGCAGTAGGGTTTCCG+CGG | - | chr1.4:4948597-4948616 | MS.gene66460:CDS | 55.0% | |
| ! | ATTTTCTCAGGGTTGCGCCG+CGG | + | chr1.4:4948617-4948636 | None:intergenic | 55.0% |
| ATTCTCCGCCGAACCGCAGA+GGG | - | chr1.4:4948545-4948564 | MS.gene66460:CDS | 60.0% | |
| ! | TTAACCCCTCTGCGGTTCGG+CGG | + | chr1.4:4948553-4948572 | None:intergenic | 60.0% |
| CATTCTCCGCCGAACCGCAG+AGG | - | chr1.4:4948544-4948563 | MS.gene66460:CDS | 65.0% | |
| TTCTCCGCCGAACCGCAGAG+GGG | - | chr1.4:4948546-4948565 | MS.gene66460:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 4948380 | 4948967 | 4948380 | ID=MS.gene66460 |
| chr1.4 | mRNA | 4948380 | 4948967 | 4948380 | ID=MS.gene66460.t1;Parent=MS.gene66460 |
| chr1.4 | exon | 4948380 | 4948967 | 4948380 | ID=MS.gene66460.t1.exon1;Parent=MS.gene66460.t1 |
| chr1.4 | CDS | 4948380 | 4948967 | 4948380 | ID=cds.MS.gene66460.t1;Parent=MS.gene66460.t1 |
| Gene Sequence |
| Protein sequence |
