Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71330.t1 | XP_013459996.1 | 95.2 | 188 | 9 | 0 | 1 | 188 | 1 | 188 | 1.30E-90 | 342.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71330.t1 | Q9LK61 | 64.9 | 191 | 64 | 1 | 1 | 188 | 1 | 191 | 1.8e-56 | 220.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71330.t1 | I3SWS9 | 95.2 | 188 | 9 | 0 | 1 | 188 | 1 | 188 | 9.4e-91 | 342.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene71330 | 0.866498 | 2.73E-65 | -1.69E-46 |
| MS.gene049217 | MS.gene71330 | 0.855334 | 6.77E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene71330 | 0.833153 | 6.28E-56 | -1.69E-46 |
| MS.gene049284 | MS.gene71330 | 0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene71330 | 0.83874 | 2.40E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene71330 | 0.816987 | 4.16E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene71330 | 0.869995 | 2.04E-66 | -1.69E-46 |
| MS.gene049425 | MS.gene71330 | -0.800804 | 1.21E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene71330 | 0.895196 | 1.21E-75 | -1.69E-46 |
| MS.gene049491 | MS.gene71330 | 0.849047 | 4.15E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene71330 | 0.838385 | 2.97E-57 | -1.69E-46 |
| MS.gene049614 | MS.gene71330 | 0.86387 | 1.83E-64 | -1.69E-46 |
| MS.gene049615 | MS.gene71330 | 0.814501 | 1.49E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene71330 | 0.85096 | 1.21E-60 | -1.69E-46 |
| MS.gene049662 | MS.gene71330 | 0.839445 | 1.58E-57 | -1.69E-46 |
| MS.gene049760 | MS.gene71330 | 0.845748 | 3.35E-59 | -1.69E-46 |
| MS.gene049805 | MS.gene71330 | 0.883672 | 3.68E-71 | -1.69E-46 |
| MS.gene050076 | MS.gene71330 | 0.885248 | 9.57E-72 | -1.69E-46 |
| MS.gene050099 | MS.gene71330 | 0.818448 | 1.95E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene71330 | 0.854684 | 1.04E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene71330 | 0.823901 | 1.08E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene71330 | 0.848135 | 7.43E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene71330 | 0.843662 | 1.22E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene71330 | 0.834345 | 3.16E-56 | -1.69E-46 |
| MS.gene050432 | MS.gene71330 | 0.856862 | 2.41E-62 | -1.69E-46 |
| MS.gene050464 | MS.gene71330 | 0.8422 | 2.99E-58 | -1.69E-46 |
| MS.gene050475 | MS.gene71330 | -0.832273 | 1.04E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene71330 | 0.803299 | 3.72E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene71330 | 0.861482 | 9.94E-64 | -1.69E-46 |
| MS.gene05053 | MS.gene71330 | 0.808422 | 3.12E-50 | -1.69E-46 |
| MS.gene050541 | MS.gene71330 | -0.831715 | 1.43E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene71330 | 0.858956 | 5.77E-63 | -1.69E-46 |
| MS.gene050670 | MS.gene71330 | 0.841354 | 5.00E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene71330 | 0.807394 | 5.16E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene71330 | 0.833249 | 5.94E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene71330 | 0.911002 | 9.95E-83 | -1.69E-46 |
| MS.gene050770 | MS.gene71330 | 0.913798 | 4.05E-84 | -1.69E-46 |
| MS.gene050772 | MS.gene71330 | 0.855027 | 8.31E-62 | -1.69E-46 |
| MS.gene050781 | MS.gene71330 | 0.81304 | 3.13E-51 | -1.69E-46 |
| MS.gene050783 | MS.gene71330 | 0.841269 | 5.26E-58 | -1.69E-46 |
| MS.gene050812 | MS.gene71330 | 0.842655 | 2.27E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene71330 | 0.824454 | 8.00E-54 | -1.69E-46 |
| MS.gene05100 | MS.gene71330 | 0.854971 | 8.63E-62 | -1.69E-46 |
| MS.gene05101 | MS.gene71330 | 0.899773 | 1.42E-77 | -1.69E-46 |
| MS.gene05105 | MS.gene71330 | 0.857428 | 1.64E-62 | -1.69E-46 |
| MS.gene051228 | MS.gene71330 | 0.840878 | 6.67E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene71330 | 0.876395 | 1.45E-68 | -1.69E-46 |
| MS.gene051471 | MS.gene71330 | 0.863872 | 1.83E-64 | -1.69E-46 |
| MS.gene051666 | MS.gene71330 | 0.881447 | 2.38E-70 | -1.69E-46 |
| MS.gene051692 | MS.gene71330 | 0.819614 | 1.06E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene71330 | 0.870943 | 9.95E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene71330 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene71330 | 0.858487 | 7.96E-63 | -1.69E-46 |
| MS.gene051877 | MS.gene71330 | 0.8628 | 3.92E-64 | -1.69E-46 |
| MS.gene052078 | MS.gene71330 | 0.879735 | 9.78E-70 | -1.69E-46 |
| MS.gene052188 | MS.gene71330 | 0.825439 | 4.68E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene71330 | 0.878995 | 1.79E-69 | -1.69E-46 |
| MS.gene052290 | MS.gene71330 | 0.85668 | 2.73E-62 | -1.69E-46 |
| MS.gene052310 | MS.gene71330 | 0.900757 | 5.32E-78 | -1.69E-46 |
| MS.gene052322 | MS.gene71330 | 0.83211 | 1.14E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene71330 | 0.88424 | 2.27E-71 | -1.69E-46 |
| MS.gene052379 | MS.gene71330 | 0.893798 | 4.49E-75 | -1.69E-46 |
| MS.gene052421 | MS.gene71330 | 0.858632 | 7.21E-63 | -1.69E-46 |
| MS.gene052481 | MS.gene71330 | 0.828976 | 6.66E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene71330 | 0.837153 | 6.15E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene71330 | 0.825084 | 5.68E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene71330 | 0.849318 | 3.49E-60 | -1.69E-46 |
| MS.gene052916 | MS.gene71330 | 0.829978 | 3.80E-55 | -1.69E-46 |
| MS.gene053009 | MS.gene71330 | 0.850199 | 1.98E-60 | -1.69E-46 |
| MS.gene053103 | MS.gene71330 | 0.867737 | 1.10E-65 | -1.69E-46 |
| MS.gene053104 | MS.gene71330 | 0.866526 | 2.67E-65 | -1.69E-46 |
| MS.gene053107 | MS.gene71330 | 0.841229 | 5.39E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene71330 | 0.828504 | 8.67E-55 | -1.69E-46 |
| MS.gene053209 | MS.gene71330 | 0.80861 | 2.85E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene71330 | 0.858445 | 8.20E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene71330 | 0.84559 | 3.69E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene71330 | 0.935666 | 5.92E-97 | -1.69E-46 |
| MS.gene053384 | MS.gene71330 | 0.815825 | 7.58E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene71330 | 0.811748 | 5.99E-51 | -1.69E-46 |
| MS.gene053579 | MS.gene71330 | 0.834453 | 2.97E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene71330 | 0.844531 | 7.14E-59 | -1.69E-46 |
| MS.gene053813 | MS.gene71330 | 0.837241 | 5.84E-57 | -1.69E-46 |
| MS.gene053915 | MS.gene71330 | 0.833272 | 5.87E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene71330 | 0.806735 | 7.12E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene71330 | 0.842059 | 3.26E-58 | -1.69E-46 |
| MS.gene054376 | MS.gene71330 | 0.911475 | 5.83E-83 | -1.69E-46 |
| MS.gene05455 | MS.gene71330 | 0.842475 | 2.53E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene71330 | 0.804379 | 2.22E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene71330 | 0.857057 | 2.12E-62 | -1.69E-46 |
| MS.gene054802 | MS.gene71330 | 0.927895 | 6.21E-92 | -1.69E-46 |
| MS.gene054803 | MS.gene71330 | 0.924312 | 8.34E-90 | -1.69E-46 |
| MS.gene054804 | MS.gene71330 | 0.927673 | 8.46E-92 | -1.69E-46 |
| MS.gene054955 | MS.gene71330 | 0.861146 | 1.26E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene71330 | 0.865772 | 4.63E-65 | -1.69E-46 |
| MS.gene055116 | MS.gene71330 | 0.828455 | 8.91E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene71330 | 0.833833 | 4.25E-56 | -1.69E-46 |
| MS.gene055254 | MS.gene71330 | 0.854882 | 9.15E-62 | -1.69E-46 |
| MS.gene055277 | MS.gene71330 | 0.88325 | 5.26E-71 | -1.69E-46 |
| MS.gene055289 | MS.gene71330 | 0.800526 | 1.38E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene71330 | 0.808355 | 3.23E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene71330 | 0.853214 | 2.77E-61 | -1.69E-46 |
| MS.gene055397 | MS.gene71330 | 0.904806 | 8.35E-80 | -1.69E-46 |
| MS.gene055412 | MS.gene71330 | 0.851287 | 9.79E-61 | -1.69E-46 |
| MS.gene055422 | MS.gene71330 | 0.850844 | 1.31E-60 | -1.69E-46 |
| MS.gene055428 | MS.gene71330 | 0.836349 | 9.86E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene71330 | 0.903484 | 3.31E-79 | -1.69E-46 |
| MS.gene055502 | MS.gene71330 | 0.830324 | 3.13E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene71330 | 0.831582 | 1.54E-55 | -1.69E-46 |
| MS.gene055636 | MS.gene71330 | 0.8295 | 4.97E-55 | -1.69E-46 |
| MS.gene055638 | MS.gene71330 | 0.820179 | 7.87E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene71330 | 0.88691 | 2.27E-72 | -1.69E-46 |
| MS.gene055722 | MS.gene71330 | 0.842447 | 2.57E-58 | -1.69E-46 |
| MS.gene055896 | MS.gene71330 | 0.877104 | 8.21E-69 | -1.69E-46 |
| MS.gene05592 | MS.gene71330 | 0.87313 | 1.87E-67 | -1.69E-46 |
| MS.gene055930 | MS.gene71330 | 0.810025 | 1.42E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene71330 | 0.835557 | 1.57E-56 | -1.69E-46 |
| MS.gene05602 | MS.gene71330 | 0.803566 | 3.28E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene71330 | 0.858923 | 5.90E-63 | -1.69E-46 |
| MS.gene056191 | MS.gene71330 | 0.830825 | 2.36E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene71330 | 0.84451 | 7.23E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene71330 | 0.863844 | 1.86E-64 | -1.69E-46 |
| MS.gene056410 | MS.gene71330 | 0.852632 | 4.06E-61 | -1.69E-46 |
| MS.gene056452 | MS.gene71330 | 0.845776 | 3.29E-59 | -1.69E-46 |
| MS.gene056511 | MS.gene71330 | 0.822274 | 2.59E-53 | -1.69E-46 |
| MS.gene056549 | MS.gene71330 | 0.828357 | 9.40E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene71330 | 0.858234 | 9.47E-63 | -1.69E-46 |
| MS.gene056612 | MS.gene71330 | 0.835169 | 1.96E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene71330 | 0.835119 | 2.02E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene71330 | 0.801546 | 8.56E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene71330 | 0.841115 | 5.78E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene71330 | 0.80656 | 7.75E-50 | -1.69E-46 |
| MS.gene056942 | MS.gene71330 | 0.822603 | 2.17E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene71330 | 0.911652 | 4.77E-83 | -1.69E-46 |
| MS.gene05702 | MS.gene71330 | 0.816454 | 5.48E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene71330 | 0.891106 | 5.38E-74 | -1.69E-46 |
| MS.gene057129 | MS.gene71330 | 0.910712 | 1.38E-82 | -1.69E-46 |
| MS.gene057146 | MS.gene71330 | 0.920988 | 6.36E-88 | -1.69E-46 |
| MS.gene057285 | MS.gene71330 | 0.807194 | 5.69E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene71330 | 0.854077 | 1.57E-61 | -1.69E-46 |
| MS.gene057331 | MS.gene71330 | 0.834215 | 3.41E-56 | -1.69E-46 |
| MS.gene05733 | MS.gene71330 | 0.800038 | 1.74E-48 | -1.69E-46 |
| MS.gene05735 | MS.gene71330 | 0.811468 | 6.90E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene71330 | 0.89786 | 9.33E-77 | -1.69E-46 |
| MS.gene057478 | MS.gene71330 | -0.818752 | 1.66E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene71330 | 0.804252 | 2.36E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene71330 | 0.812746 | 3.63E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene71330 | 0.804029 | 2.63E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene71330 | 0.811193 | 7.91E-51 | -1.69E-46 |
| MS.gene058006 | MS.gene71330 | 0.821436 | 4.04E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene71330 | 0.89829 | 6.13E-77 | -1.69E-46 |
| MS.gene058082 | MS.gene71330 | 0.802914 | 4.47E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene71330 | 0.8178 | 2.73E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene71330 | 0.842013 | 3.35E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene71330 | 0.902524 | 8.87E-79 | -1.69E-46 |
| MS.gene058323 | MS.gene71330 | 0.858899 | 6.00E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene71330 | 0.846631 | 1.92E-59 | -1.69E-46 |
| MS.gene058544 | MS.gene71330 | 0.816277 | 6.01E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene71330 | 0.938195 | 1.01E-98 | -1.69E-46 |
| MS.gene058723 | MS.gene71330 | 0.801756 | 7.75E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene71330 | 0.807166 | 5.77E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene71330 | 0.845727 | 3.39E-59 | -1.69E-46 |
| MS.gene058903 | MS.gene71330 | 0.825737 | 3.98E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene71330 | 0.828527 | 8.56E-55 | -1.69E-46 |
| MS.gene058993 | MS.gene71330 | 0.838197 | 3.32E-57 | -1.69E-46 |
| MS.gene059029 | MS.gene71330 | 0.849674 | 2.78E-60 | -1.69E-46 |
| MS.gene05907 | MS.gene71330 | 0.853652 | 2.07E-61 | -1.69E-46 |
| MS.gene059141 | MS.gene71330 | 0.805081 | 1.59E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene71330 | 0.873505 | 1.40E-67 | -1.69E-46 |
| MS.gene05934 | MS.gene71330 | 0.866301 | 3.15E-65 | -1.69E-46 |
| MS.gene059536 | MS.gene71330 | 0.935283 | 1.08E-96 | -1.69E-46 |
| MS.gene059597 | MS.gene71330 | 0.86267 | 4.30E-64 | -1.69E-46 |
| MS.gene05959 | MS.gene71330 | 0.832796 | 7.71E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene71330 | 0.880067 | 7.45E-70 | -1.69E-46 |
| MS.gene059677 | MS.gene71330 | 0.821238 | 4.49E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene71330 | 0.86782 | 1.03E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene71330 | 0.858783 | 6.50E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene71330 | 0.86392 | 1.76E-64 | -1.69E-46 |
| MS.gene059711 | MS.gene71330 | 0.819027 | 1.44E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene71330 | 0.850055 | 2.17E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene71330 | 0.815127 | 1.08E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene71330 | 0.86466 | 1.04E-64 | -1.69E-46 |
| MS.gene059960 | MS.gene71330 | 0.955173 | 5.57E-113 | -1.69E-46 |
| MS.gene060005 | MS.gene71330 | 0.806281 | 8.88E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene71330 | 0.863838 | 1.87E-64 | -1.69E-46 |
| MS.gene060403 | MS.gene71330 | 0.831101 | 2.02E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene71330 | 0.887145 | 1.85E-72 | -1.69E-46 |
| MS.gene060818 | MS.gene71330 | 0.874489 | 6.49E-68 | -1.69E-46 |
| MS.gene060835 | MS.gene71330 | 0.803983 | 2.69E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene71330 | 0.817325 | 3.50E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene71330 | 0.836269 | 1.03E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene71330 | 0.838839 | 2.27E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene71330 | 0.869748 | 2.45E-66 | -1.69E-46 |
| MS.gene061049 | MS.gene71330 | 0.811723 | 6.07E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene71330 | -0.842777 | 2.10E-58 | -1.69E-46 |
| MS.gene061134 | MS.gene71330 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene71330 | 0.866969 | 1.93E-65 | -1.69E-46 |
| MS.gene061171 | MS.gene71330 | 0.811525 | 6.70E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene71330 | 0.946638 | 3.15E-105 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71330.t1 | MTR_3g058430 | 95.213 | 188 | 9 | 0 | 1 | 188 | 1 | 188 | 1.95e-115 | 326 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71330.t1 | AT3G13120 | 64.398 | 191 | 65 | 1 | 1 | 188 | 1 | 191 | 5.33e-75 | 224 |
| MS.gene71330.t1 | AT3G13120 | 64.398 | 191 | 65 | 1 | 1 | 188 | 1 | 191 | 5.33e-75 | 224 |
| MS.gene71330.t1 | AT3G13120 | 64.398 | 191 | 65 | 1 | 1 | 188 | 1 | 191 | 5.33e-75 | 224 |
Find 28 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTTTGTGCTTTGTTTC+TGG | 0.060318 | 3.3:-47451938 | MS.gene71330:CDS |
| GACACAGTGAATTCGCTTCT+TGG | 0.315569 | 3.3:+47449193 | None:intergenic |
| ACCTCAGAATTCAAAACTTC+AGG | 0.326023 | 3.3:+47451854 | None:intergenic |
| TGCATCCAGTATCTGCTTGC+AGG | 0.346889 | 3.3:+47449262 | None:intergenic |
| TGTGTACGTGTGGAGATTTA+AGG | 0.348074 | 3.3:+47449171 | None:intergenic |
| AAGCACAAAGATTGAAGCTT+TGG | 0.358455 | 3.3:+47451947 | None:intergenic |
| GGATTCCTGCAAGCAGATAC+TGG | 0.366808 | 3.3:-47449267 | MS.gene71330:CDS |
| AGATAACAATGGTGAAGAAT+TGG | 0.371117 | 3.3:+47451976 | None:intergenic |
| ACAACAGTTGATAACTTAAG+AGG | 0.390677 | 3.3:+47451887 | None:intergenic |
| TTCTTGGTTGGTAAAGGAAC+AGG | 0.402200 | 3.3:+47449209 | None:intergenic |
| GAATCTATTGTTTGTGCTGT+AGG | 0.413081 | 3.3:+47449089 | None:intergenic |
| TTACTTGGTCCCCTTGATAG+AGG | 0.436195 | 3.3:-47449288 | MS.gene71330:CDS |
| AATCAAGCTTAGATCTTACT+TGG | 0.443706 | 3.3:-47449303 | MS.gene71330:CDS |
| ATTCGCTTCTTGGTTGGTAA+AGG | 0.474280 | 3.3:+47449203 | None:intergenic |
| ATGCAGCTTGATCTTCCTGC+TGG | 0.477604 | 3.3:-47449062 | MS.gene71330:CDS |
| GATGAGTTCTGATCTCGAAA+TGG | 0.486839 | 3.3:+47449135 | None:intergenic |
| CTTGCAGGAATCCTCTATCA+AGG | 0.519406 | 3.3:+47449277 | None:intergenic |
| CAGTGAATTCGCTTCTTGGT+TGG | 0.546112 | 3.3:+47449197 | None:intergenic |
| TTGTTTCTGGTAACACGTTG+AGG | 0.552159 | 3.3:-47451925 | MS.gene71330:CDS |
| ACTTCGACATCAACGCCAGC+AGG | 0.555474 | 3.3:+47449047 | None:intergenic |
| CATTGGGGATAATGCAGACA+TGG | 0.557328 | 3.3:-47450674 | MS.gene71330:intron |
| CACACGTACACAAGGATGCT+CGG | 0.558591 | 3.3:-47449160 | MS.gene71330:CDS |
| TTGGAAGAGACAGAAAGAGA+AGG | 0.576021 | 3.3:+47451995 | None:intergenic |
| TTGCAGGAATCCTCTATCAA+GGG | 0.586905 | 3.3:+47449278 | None:intergenic |
| TTTGGCTTTGAAGATAACAA+TGG | 0.593808 | 3.3:+47451965 | None:intergenic |
| CGAGCATCCTTGTGTACGTG+TGG | 0.612723 | 3.3:+47449161 | None:intergenic |
| TAAATCTCCACACGTACACA+AGG | 0.632451 | 3.3:-47449168 | MS.gene71330:CDS |
| TGCAGGAATCCTCTATCAAG+GGG | 0.633408 | 3.3:+47449279 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATATCACATTAATT+CGG | + | chr3.3:47450867-47450886 | None:intergenic | 10.0% |
| !!! | TTTAAAGAATTTAAAATTCT+AGG | - | chr3.3:47449993-47450012 | MS.gene71330:intron | 10.0% |
| !! | AAAAAAAATGCATTAAAATC+TGG | + | chr3.3:47451317-47451336 | None:intergenic | 15.0% |
| !! | AAAATATATCACATTAATTC+GGG | + | chr3.3:47450866-47450885 | None:intergenic | 15.0% |
| !! | AACAGTGAAATAATAAAATA+AGG | + | chr3.3:47451040-47451059 | None:intergenic | 15.0% |
| !! | TTATATGTAGTTTAATATGT+TGG | - | chr3.3:47450207-47450226 | MS.gene71330:intron | 15.0% |
| !!! | GAATATTGATTTTGTTTAAT+TGG | - | chr3.3:47449313-47449332 | MS.gene71330:CDS | 15.0% |
| !!! | TATTTTATTATTTCACTGTT+TGG | - | chr3.3:47451040-47451059 | MS.gene71330:intron | 15.0% |
| !! | AATCTGATTTATATTTGGAT+GGG | - | chr3.3:47449565-47449584 | MS.gene71330:intron | 20.0% |
| !! | AATGCAATCTGATTTATATT+TGG | - | chr3.3:47449560-47449579 | MS.gene71330:intron | 20.0% |
| !! | ACATATTAAATGACTGAAAA+TGG | + | chr3.3:47450498-47450517 | None:intergenic | 20.0% |
| !! | ATGAATGAAAATGAAGAAAA+GGG | + | chr3.3:47449264-47449283 | None:intergenic | 20.0% |
| !! | TGAACATATGAAAAACAATA+GGG | - | chr3.3:47449921-47449940 | MS.gene71330:intron | 20.0% |
| !! | TTGAACATATGAAAAACAAT+AGG | - | chr3.3:47449920-47449939 | MS.gene71330:intron | 20.0% |
| !!! | ATTGATTTTGTTTAATTGGT+TGG | - | chr3.3:47449317-47449336 | MS.gene71330:CDS | 20.0% |
| !!! | GCTTAAAGTTAGTATAATTT+TGG | - | chr3.3:47449652-47449671 | MS.gene71330:intron | 20.0% |
| !!! | TAAAGTTAGTATAATTTTGG+AGG | - | chr3.3:47449655-47449674 | MS.gene71330:intron | 20.0% |
| !!! | TTTTCAATCTATTCTTACAT+AGG | - | chr3.3:47449838-47449857 | MS.gene71330:intron | 20.0% |
| ! | AACTTTAAGCTAGAATTTGA+AGG | + | chr3.3:47449642-47449661 | None:intergenic | 25.0% |
| ! | AAGAATGAAAACAGCTAAAT+AGG | + | chr3.3:47451134-47451153 | None:intergenic | 25.0% |
| ! | AGAATGAAAACAGCTAAATA+GGG | + | chr3.3:47451133-47451152 | None:intergenic | 25.0% |
| ! | AGCTTACATTGTTAATGAAA+AGG | - | chr3.3:47450989-47451008 | MS.gene71330:intron | 25.0% |
| ! | ATGTAATAGCAATGAAATCA+TGG | - | chr3.3:47450514-47450533 | MS.gene71330:intron | 25.0% |
| ! | ATTCATGTTTGTATTGTGTT+TGG | - | chr3.3:47449278-47449297 | MS.gene71330:CDS | 25.0% |
| ! | CAATCTGATTTATATTTGGA+TGG | - | chr3.3:47449564-47449583 | MS.gene71330:intron | 25.0% |
| ! | CATGAATGAAAATGAAGAAA+AGG | + | chr3.3:47449265-47449284 | None:intergenic | 25.0% |
| ! | GAACATATGAAAAACAATAG+GGG | - | chr3.3:47449922-47449941 | MS.gene71330:intron | 25.0% |
| ! | TCAAACATTTAGAAAAACGT+AGG | + | chr3.3:47450284-47450303 | None:intergenic | 25.0% |
| ! | TCTTTGTGATAAAAATGTCT+TGG | - | chr3.3:47450321-47450340 | MS.gene71330:intron | 25.0% |
| ! | TGTAATAGCAATGAAATCAT+GGG | - | chr3.3:47450515-47450534 | MS.gene71330:intron | 25.0% |
| ! | TGTTTGATAAGTCAAGTAAT+AGG | - | chr3.3:47450674-47450693 | MS.gene71330:intron | 25.0% |
| ! | TTACAAATTGAGTGTATGTT+TGG | + | chr3.3:47450650-47450669 | None:intergenic | 25.0% |
| !! | GAGTTAACTGATGATTTTTA+TGG | - | chr3.3:47451628-47451647 | MS.gene71330:intron | 25.0% |
| !! | GGTTTATATTTGTTTGCTTT+TGG | - | chr3.3:47450445-47450464 | MS.gene71330:intron | 25.0% |
| !! | TTAACTGATGATTTTTATGG+AGG | - | chr3.3:47451631-47451650 | MS.gene71330:intron | 25.0% |
| !! | TTTTTCATCCAAAAAATCGA+AGG | - | chr3.3:47450962-47450981 | MS.gene71330:intron | 25.0% |
| !! | TTTTTGGATGAAAAAAGTGA+TGG | + | chr3.3:47450957-47450976 | None:intergenic | 25.0% |
| !!! | AAAAATGTCTTGGTGTTTTT+AGG | - | chr3.3:47450331-47450350 | MS.gene71330:intron | 25.0% |
| !!! | AATTTTGGCTTATGTAAAAG+TGG | - | chr3.3:47449510-47449529 | MS.gene71330:intron | 25.0% |
| !!! | GATTTGCTATTTTCAATAGT+TGG | - | chr3.3:47450424-47450443 | MS.gene71330:intron | 25.0% |
| !!! | TAAACTGATTTGATCATGTT+TGG | + | chr3.3:47449479-47449498 | None:intergenic | 25.0% |
| !!! | TGTTTCTTCGAATTTTTAGA+TGG | - | chr3.3:47451720-47451739 | MS.gene71330:intron | 25.0% |
| !!! | TTATATTTGTTTGCTTTTGG+AGG | - | chr3.3:47450448-47450467 | MS.gene71330:intron | 25.0% |
| !!! | TTTACCTCTAGAATCAATTT+TGG | - | chr3.3:47449495-47449514 | MS.gene71330:intron | 25.0% |
| AACTACCAATGCAAAAACAA+TGG | - | chr3.3:47451831-47451850 | MS.gene71330:intron | 30.0% | |
| AATAAGGTGCATATAGAGTA+AGG | + | chr3.3:47451174-47451193 | None:intergenic | 30.0% | |
| AATCAAGCTTAGATCTTACT+TGG | - | chr3.3:47451762-47451781 | MS.gene71330:intron | 30.0% | |
| AATCCAATGTTTCAGAAGAA+TGG | + | chr3.3:47451223-47451242 | None:intergenic | 30.0% | |
| AATGTTTCAGAAGAATGGAT+GGG | + | chr3.3:47451218-47451237 | None:intergenic | 30.0% | |
| AATTGAGTGTATGTTTGGAT+TGG | + | chr3.3:47450645-47450664 | None:intergenic | 30.0% | |
| ACTACCAATGCAAAAACAAT+GGG | - | chr3.3:47451832-47451851 | MS.gene71330:intron | 30.0% | |
| AGATAACAATGGTGAAGAAT+TGG | + | chr3.3:47449092-47449111 | None:intergenic | 30.0% | |
| ATGTTTGAACTCAATTCAGT+TGG | - | chr3.3:47450296-47450315 | MS.gene71330:intron | 30.0% | |
| GAGGAAATGTAATGTTATGA+GGG | + | chr3.3:47450044-47450063 | None:intergenic | 30.0% | |
| GGTAATAAAAAAGAGGGAAA+AGG | - | chr3.3:47451505-47451524 | MS.gene71330:intron | 30.0% | |
| TACTCTATATGCACCTTATT+TGG | - | chr3.3:47451174-47451193 | MS.gene71330:intron | 30.0% | |
| TGAGGAAATGTAATGTTATG+AGG | + | chr3.3:47450045-47450064 | None:intergenic | 30.0% | |
| TGATAAAGCCAAACCAAATA+AGG | + | chr3.3:47451190-47451209 | None:intergenic | 30.0% | |
| TGTAAATGAAAAAGCCGAAA+GGG | + | chr3.3:47451110-47451129 | None:intergenic | 30.0% | |
| TGTTAATGAAAAGGAACTGA+AGG | - | chr3.3:47450998-47451017 | MS.gene71330:intron | 30.0% | |
| TTCGTGAATATGAATTTCAC+TGG | - | chr3.3:47450230-47450249 | MS.gene71330:intron | 30.0% | |
| ! | AGCTTTTACCTTCGATTTTT+TGG | + | chr3.3:47450973-47450992 | None:intergenic | 30.0% |
| ! | CTTAGTTCTTAGTGAATGTT+TGG | + | chr3.3:47449790-47449809 | None:intergenic | 30.0% |
| ! | TAAGCCAAAATTGATTCTAG+AGG | + | chr3.3:47449502-47449521 | None:intergenic | 30.0% |
| ! | TATATGCACCTTATTTGGTT+TGG | - | chr3.3:47451179-47451198 | MS.gene71330:intron | 30.0% |
| ! | TGAGCTAAAACTGATTTCAA+AGG | + | chr3.3:47449754-47449773 | None:intergenic | 30.0% |
| ! | TTGATTCTGATTTTCTGCTT+TGG | + | chr3.3:47451748-47451767 | None:intergenic | 30.0% |
| !! | ACAACAGTTGATAACTTAAG+AGG | + | chr3.3:47449181-47449200 | None:intergenic | 30.0% |
| !! | GCAAATGTTACGTTTTAGAT+TGG | - | chr3.3:47450258-47450277 | MS.gene71330:intron | 30.0% |
| !! | TTCTTCTGAAACATTGGATT+TGG | - | chr3.3:47451223-47451242 | MS.gene71330:intron | 30.0% |
| !! | TTTGGCTTTGAAGATAACAA+TGG | + | chr3.3:47449103-47449122 | None:intergenic | 30.0% |
| !!! | AGTTTTAGCTCATGTAAAAG+TGG | - | chr3.3:47449762-47449781 | MS.gene71330:intron | 30.0% |
| AAAGGGTAAGTGAAAGACTT+TGG | + | chr3.3:47451093-47451112 | None:intergenic | 35.0% | |
| AAGCACAAAGATTGAAGCTT+TGG | + | chr3.3:47449121-47449140 | None:intergenic | 35.0% | |
| AAGGGTAAGTGAAAGACTTT+GGG | + | chr3.3:47451092-47451111 | None:intergenic | 35.0% | |
| AAGTCTTTCACTTACCCTTT+CGG | - | chr3.3:47451093-47451112 | MS.gene71330:intron | 35.0% | |
| ACCTCAGAATTCAAAACTTC+AGG | + | chr3.3:47449214-47449233 | None:intergenic | 35.0% | |
| AGAGTCCACAGATAAGTTAT+AGG | + | chr3.3:47451674-47451693 | None:intergenic | 35.0% | |
| AGCACGTCAAAAATTAGCAT+TGG | - | chr3.3:47450374-47450393 | MS.gene71330:intron | 35.0% | |
| CAATGTTTCAGAAGAATGGA+TGG | + | chr3.3:47451219-47451238 | None:intergenic | 35.0% | |
| CACGTCAAAAATTAGCATTG+GGG | - | chr3.3:47450376-47450395 | MS.gene71330:intron | 35.0% | |
| CCTGAGGGTAATAAAAAAGA+GGG | - | chr3.3:47451499-47451518 | MS.gene71330:intron | 35.0% | |
| GAATCTATTGTTTGTGCTGT+AGG | + | chr3.3:47451979-47451998 | None:intergenic | 35.0% | |
| GAGGGAATGTAATGTTATGA+GGG | + | chr3.3:47450125-47450144 | None:intergenic | 35.0% | |
| GAGGGAATTCAAATACTTTG+AGG | + | chr3.3:47450026-47450045 | None:intergenic | 35.0% | |
| GCACGTCAAAAATTAGCATT+GGG | - | chr3.3:47450375-47450394 | MS.gene71330:intron | 35.0% | |
| GCATAAAAGCGATGAATTTG+AGG | - | chr3.3:47449591-47449610 | MS.gene71330:intron | 35.0% | |
| GGGAATGTAATGTAATGTTG+AGG | + | chr3.3:47450063-47450082 | None:intergenic | 35.0% | |
| GTGAATTCCATTGTTTGGAT+GGG | + | chr3.3:47450085-47450104 | None:intergenic | 35.0% | |
| GTGTAAATGAAAAAGCCGAA+AGG | + | chr3.3:47451111-47451130 | None:intergenic | 35.0% | |
| GTTTCAGAACAAGGTTACAT+TGG | - | chr3.3:47450760-47450779 | MS.gene71330:intron | 35.0% | |
| TACATAGGTAATGAGTACCT+AGG | - | chr3.3:47449853-47449872 | MS.gene71330:intron | 35.0% | |
| TAGTCATCATCCAATTTCCA+TGG | - | chr3.3:47451581-47451600 | MS.gene71330:intron | 35.0% | |
| TATGGCATAGTTTCAGAACA+AGG | - | chr3.3:47450751-47450770 | MS.gene71330:intron | 35.0% | |
| TCAAAAACCTGTGTTTGGAT+GGG | + | chr3.3:47450158-47450177 | None:intergenic | 35.0% | |
| TCCAAACACACTCTAAATTC+TGG | + | chr3.3:47449956-47449975 | None:intergenic | 35.0% | |
| TCCTGAGGGTAATAAAAAAG+AGG | - | chr3.3:47451498-47451517 | MS.gene71330:intron | 35.0% | |
| TGAATTCCATTGTTTGGATG+GGG | + | chr3.3:47450084-47450103 | None:intergenic | 35.0% | |
| TGAGGGAATGTAATGTTATG+AGG | + | chr3.3:47450126-47450145 | None:intergenic | 35.0% | |
| TGTGACCTATAACTTATCTG+TGG | - | chr3.3:47451666-47451685 | MS.gene71330:intron | 35.0% | |
| TGTGTTTGGATGAGGTAATT+TGG | - | chr3.3:47449966-47449985 | MS.gene71330:intron | 35.0% | |
| TTGAGGTGAATTCCATTGTT+TGG | + | chr3.3:47450090-47450109 | None:intergenic | 35.0% | |
| ! | ACTATGCCATACTTTTGACA+AGG | + | chr3.3:47450742-47450761 | None:intergenic | 35.0% |
| ! | ACTGCAATTTTGCCAAATCA+TGG | - | chr3.3:47450591-47450610 | MS.gene71330:intron | 35.0% |
| ! | ATGATTTGGCAAAATTGCAG+TGG | + | chr3.3:47450592-47450611 | None:intergenic | 35.0% |
| ! | ATGCTAATTTTTGACGTGCT+TGG | + | chr3.3:47450374-47450393 | None:intergenic | 35.0% |
| ! | ATTTAGAGTGTGTTTGGATG+AGG | - | chr3.3:47449958-47449977 | MS.gene71330:intron | 35.0% |
| ! | CTAGGAATTTTCTCAATGCT+TGG | - | chr3.3:47449871-47449890 | MS.gene71330:intron | 35.0% |
| ! | CTATGCCATACTTTTGACAA+GGG | + | chr3.3:47450741-47450760 | None:intergenic | 35.0% |
| ! | TCCAGAATTTAGAGTGTGTT+TGG | - | chr3.3:47449952-47449971 | MS.gene71330:intron | 35.0% |
| ! | TTAGTGCATCTTTGGATTAG+CGG | - | chr3.3:47450543-47450562 | MS.gene71330:intron | 35.0% |
| !! | AGCTGTTTTCATTCTTCTGA+GGG | - | chr3.3:47451138-47451157 | MS.gene71330:intron | 35.0% |
| !! | CAAGCATTGAGAAAATTCCT+AGG | + | chr3.3:47449873-47449892 | None:intergenic | 35.0% |
| !! | CAATCTTTGTGCTTTGTTTC+TGG | - | chr3.3:47449127-47449146 | MS.gene71330:CDS | 35.0% |
| !! | CATCCATTCTTCTGAAACAT+TGG | - | chr3.3:47451217-47451236 | MS.gene71330:intron | 35.0% |
| !! | TAGCTGTTTTCATTCTTCTG+AGG | - | chr3.3:47451137-47451156 | MS.gene71330:intron | 35.0% |
| !! | TTTTGGAGGCTTCTTATATG+TGG | - | chr3.3:47450462-47450481 | MS.gene71330:intron | 35.0% |
| !!! | GTGTTTTTAGGTTGATGACT+TGG | - | chr3.3:47450343-47450362 | MS.gene71330:intron | 35.0% |
| !!! | TCCTGAAGTTTTGAATTCTG+AGG | - | chr3.3:47449210-47449229 | MS.gene71330:CDS | 35.0% |
| AAAAACCTGTGTTTGGATGG+GGG | + | chr3.3:47450156-47450175 | None:intergenic | 40.0% | |
| AATCCAAATCCCTGAAACAC+AGG | - | chr3.3:47451451-47451470 | MS.gene71330:intron | 40.0% | |
| ACCACTGGATAGAAATCAGA+CGG | + | chr3.3:47451377-47451396 | None:intergenic | 40.0% | |
| AGGCTAAGAATCAATCGTAG+AGG | - | chr3.3:47449611-47449630 | MS.gene71330:intron | 40.0% | |
| ATGCTCCCTTGTCAAAAGTA+TGG | - | chr3.3:47450733-47450752 | MS.gene71330:intron | 40.0% | |
| ATGTTTCACTGCTGAGTAAC+TGG | + | chr3.3:47450713-47450732 | None:intergenic | 40.0% | |
| CAAAAACCTGTGTTTGGATG+GGG | + | chr3.3:47450157-47450176 | None:intergenic | 40.0% | |
| CCAATTTCCATGGAAAAGTG+AGG | - | chr3.3:47451591-47451610 | MS.gene71330:intron | 40.0% | |
| CTCAAAAACCTGTGTTTGGA+TGG | + | chr3.3:47450159-47450178 | None:intergenic | 40.0% | |
| GAATTCCATTGTTTGGATGG+GGG | + | chr3.3:47450083-47450102 | None:intergenic | 40.0% | |
| GGTGAATTCCATTGTTTGGA+TGG | + | chr3.3:47450086-47450105 | None:intergenic | 40.0% | |
| TAAATCTCCACACGTACACA+AGG | - | chr3.3:47451897-47451916 | MS.gene71330:CDS | 40.0% | |
| TGAGTTAGGCAAAATCACAC+TGG | + | chr3.3:47450619-47450638 | None:intergenic | 40.0% | |
| TGTGTACGTGTGGAGATTTA+AGG | + | chr3.3:47451897-47451916 | None:intergenic | 40.0% | |
| TTGCAGGAATCCTCTATCAA+GGG | + | chr3.3:47451790-47451809 | None:intergenic | 40.0% | |
| TTGGAAGAGACAGAAAGAGA+AGG | + | chr3.3:47449073-47449092 | None:intergenic | 40.0% | |
| ! | GATGAGTTCTGATCTCGAAA+TGG | + | chr3.3:47451933-47451952 | None:intergenic | 40.0% |
| ! | TGAGTGTATGTTTGGATTGG+CGG | + | chr3.3:47450642-47450661 | None:intergenic | 40.0% |
| !! | ATTCGCTTCTTGGTTGGTAA+AGG | + | chr3.3:47451865-47451884 | None:intergenic | 40.0% |
| !! | CCAAACACAGGTTTTTGAGA+CGG | - | chr3.3:47450160-47450179 | MS.gene71330:intron | 40.0% |
| !! | CCTCACTTTTCCATGGAAAT+TGG | + | chr3.3:47451594-47451613 | None:intergenic | 40.0% |
| !! | GGGACATTTTAGTGCATCTT+TGG | - | chr3.3:47450535-47450554 | MS.gene71330:intron | 40.0% |
| !! | TTCTACTCCTCACTTTTCCA+TGG | + | chr3.3:47451601-47451620 | None:intergenic | 40.0% |
| !! | TTCTTGGTTGGTAAAGGAAC+AGG | + | chr3.3:47451859-47451878 | None:intergenic | 40.0% |
| !! | TTGTTTCTGGTAACACGTTG+AGG | - | chr3.3:47449140-47449159 | MS.gene71330:CDS | 40.0% |
| !!! | AGGACCCATTGTTTTTGCAT+TGG | + | chr3.3:47451839-47451858 | None:intergenic | 40.0% |
| !!! | AGGTTTTTGAGACGGTGTAA+AGG | - | chr3.3:47450168-47450187 | MS.gene71330:intron | 40.0% |
| !!! | CCCTCTTTTTTATTACCCTC+AGG | + | chr3.3:47451502-47451521 | None:intergenic | 40.0% |
| !!! | GGTTTTTGAGACGGTGTAAA+GGG | - | chr3.3:47450169-47450188 | MS.gene71330:intron | 40.0% |
| !!! | GTTTTTGAGACGGTGTAAAG+GGG | - | chr3.3:47450170-47450189 | MS.gene71330:intron | 40.0% |
| ACATTCCCCCATCCAAACAA+TGG | - | chr3.3:47450075-47450094 | MS.gene71330:intron | 45.0% | |
| ACCGTCTGATTTCTATCCAG+TGG | - | chr3.3:47451373-47451392 | MS.gene71330:intron | 45.0% | |
| ATCACACTATGTGGTTCCTG+AGG | - | chr3.3:47451483-47451502 | MS.gene71330:intron | 45.0% | |
| ATCACACTGGCACCATGATT+TGG | + | chr3.3:47450606-47450625 | None:intergenic | 45.0% | |
| CAGTGAATTCGCTTCTTGGT+TGG | + | chr3.3:47451871-47451890 | None:intergenic | 45.0% | |
| CATTGGGGATAATGCAGACA+TGG | - | chr3.3:47450391-47450410 | MS.gene71330:intron | 45.0% | |
| CCACATAGTGTGATTGCACA+AGG | + | chr3.3:47451477-47451496 | None:intergenic | 45.0% | |
| CCGTCTCAAAAACCTGTGTT+TGG | + | chr3.3:47450163-47450182 | None:intergenic | 45.0% | |
| CCTTGTGCAATCACACTATG+TGG | - | chr3.3:47451474-47451493 | MS.gene71330:intron | 45.0% | |
| CTTGCAGGAATCCTCTATCA+AGG | + | chr3.3:47451791-47451810 | None:intergenic | 45.0% | |
| GACACAGTGAATTCGCTTCT+TGG | + | chr3.3:47451875-47451894 | None:intergenic | 45.0% | |
| TCACACTATGTGGTTCCTGA+GGG | - | chr3.3:47451484-47451503 | MS.gene71330:intron | 45.0% | |
| TGCAGGAATCCTCTATCAAG+GGG | + | chr3.3:47451789-47451808 | None:intergenic | 45.0% | |
| TTACTTGGTCCCCTTGATAG+AGG | - | chr3.3:47451777-47451796 | MS.gene71330:intron | 45.0% | |
| ! | AGTGTTGGATCGAGACTAGA+CGG | - | chr3.3:47451290-47451309 | MS.gene71330:intron | 45.0% |
| ! | TTGGATGGGGGAATGTTTTG+AGG | + | chr3.3:47450144-47450163 | None:intergenic | 45.0% |
| !! | TGGATGGGGGAATGTTTTGA+GGG | + | chr3.3:47450143-47450162 | None:intergenic | 45.0% |
| ACATTCCCCCATCCAAACAC+AGG | - | chr3.3:47450148-47450167 | MS.gene71330:intron | 50.0% | |
| AGGCCTGTGTTTCAGGGATT+TGG | + | chr3.3:47451457-47451476 | None:intergenic | 50.0% | |
| AGTCATGGTCTCATGGACGT+AGG | + | chr3.3:47451402-47451421 | None:intergenic | 50.0% | |
| ATGCAGCTTGATCTTCCTGC+TGG | - | chr3.3:47452003-47452022 | MS.gene71330:CDS | 50.0% | |
| CACACGTACACAAGGATGCT+CGG | - | chr3.3:47451905-47451924 | MS.gene71330:CDS | 50.0% | |
| GGATTCCTGCAAGCAGATAC+TGG | - | chr3.3:47451798-47451817 | MS.gene71330:intron | 50.0% | |
| TCATGGACGTAGGTAACCAC+TGG | + | chr3.3:47451392-47451411 | None:intergenic | 50.0% | |
| TCCACACATTCACGCAGTCT+GGG | - | chr3.3:47451258-47451277 | MS.gene71330:intron | 50.0% | |
| TGCACAAGGCCTGTGTTTCA+GGG | + | chr3.3:47451463-47451482 | None:intergenic | 50.0% | |
| TGCATCCAGTATCTGCTTGC+AGG | + | chr3.3:47451806-47451825 | None:intergenic | 50.0% | |
| TTCACGCAGTCATGGTCTCA+TGG | + | chr3.3:47451409-47451428 | None:intergenic | 50.0% | |
| TTCCACACATTCACGCAGTC+TGG | - | chr3.3:47451257-47451276 | MS.gene71330:intron | 50.0% | |
| TTGCACAAGGCCTGTGTTTC+AGG | + | chr3.3:47451464-47451483 | None:intergenic | 50.0% | |
| TTTGGATTTGACGCTGTCCG+CGG | + | chr3.3:47451439-47451458 | None:intergenic | 50.0% | |
| ! | ATTCACGCAGTCTGGGATGT+CGG | - | chr3.3:47451265-47451284 | MS.gene71330:intron | 50.0% |
| !! | GTTTGGATTGGCGGTGAGTT+AGG | + | chr3.3:47450633-47450652 | None:intergenic | 50.0% |
| ACTTCGACATCAACGCCAGC+AGG | + | chr3.3:47452021-47452040 | None:intergenic | 55.0% | |
| CGAGCATCCTTGTGTACGTG+TGG | + | chr3.3:47451907-47451926 | None:intergenic | 55.0% | |
| GGTGCACATTCACGCAGTCA+TGG | + | chr3.3:47451417-47451436 | None:intergenic | 55.0% | |
| TCCCAGACTGCGTGAATGTG+TGG | + | chr3.3:47451262-47451281 | None:intergenic | 55.0% | |
| TTGGATTTGACGCTGTCCGC+GGG | + | chr3.3:47451438-47451457 | None:intergenic | 55.0% | |
| ! | TCTGGGATGTCGGTGAGTGT+TGG | - | chr3.3:47451275-47451294 | MS.gene71330:intron | 55.0% |
| ACTGCGTGAATGTGCACCCG+CGG | - | chr3.3:47451419-47451438 | MS.gene71330:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 47449037 | 47452050 | 47449037 | ID=MS.gene71330 |
| chr3.3 | mRNA | 47449037 | 47452050 | 47449037 | ID=MS.gene71330.t1;Parent=MS.gene71330 |
| chr3.3 | exon | 47451856 | 47452050 | 47451856 | ID=MS.gene71330.t1.exon1;Parent=MS.gene71330.t1 |
| chr3.3 | CDS | 47451856 | 47452050 | 47451856 | ID=cds.MS.gene71330.t1;Parent=MS.gene71330.t1 |
| chr3.3 | exon | 47450675 | 47450734 | 47450675 | ID=MS.gene71330.t1.exon2;Parent=MS.gene71330.t1 |
| chr3.3 | CDS | 47450675 | 47450734 | 47450675 | ID=cds.MS.gene71330.t1;Parent=MS.gene71330.t1 |
| chr3.3 | exon | 47449037 | 47449348 | 47449037 | ID=MS.gene71330.t1.exon3;Parent=MS.gene71330.t1 |
| chr3.3 | CDS | 47449037 | 47449348 | 47449037 | ID=cds.MS.gene71330.t1;Parent=MS.gene71330.t1 |
| Gene Sequence |
| Protein sequence |
