AlfalfaGEDB | MS.gene062971

M. sativa cultivar XinJiangDaYe / MS.gene062971

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062971.t1	AES89321.1	91.9	86	7	0	1	86	1	86	9.00E-39	169.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062971.t1	P33080	67.8	90	25	1	1	86	1	90	1.3e-30	133.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062971.t1	G7JL46	91.9	86	7	0	1	86	1	86	6.5e-39	169.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049661	MS.gene062971	0.836103	1.14E-56	-1.69E-46
MS.gene049662	MS.gene062971	0.830411	2.98E-55	-1.69E-46
MS.gene052188	MS.gene062971	0.801109	1.05E-48	-1.69E-46
MS.gene052340	MS.gene062971	0.813006	3.18E-51	-1.69E-46
MS.gene055116	MS.gene062971	0.806074	9.81E-50	-1.69E-46
MS.gene055277	MS.gene062971	0.801078	1.07E-48	-1.69E-46
MS.gene055422	MS.gene062971	0.805687	1.18E-49	-1.69E-46
MS.gene056191	MS.gene062971	0.80649	8.02E-50	-1.69E-46
MS.gene05702	MS.gene062971	0.814539	1.46E-51	-1.69E-46
MS.gene057450	MS.gene062971	0.800473	1.42E-48	-1.69E-46
MS.gene057782	MS.gene062971	0.814233	1.71E-51	-1.69E-46
MS.gene057796	MS.gene062971	0.80405	2.60E-49	-1.69E-46
MS.gene057799	MS.gene062971	0.825831	3.78E-54	-1.69E-46
MS.gene057806	MS.gene062971	0.813834	2.09E-51	-1.69E-46
MS.gene058928	MS.gene062971	0.833907	4.07E-56	-1.69E-46
MS.gene059285	MS.gene062971	0.820315	7.32E-53	-1.69E-46
MS.gene059294	MS.gene062971	0.822339	2.50E-53	-1.69E-46
MS.gene06037	MS.gene062971	0.837772	4.27E-57	-1.69E-46
MS.gene061049	MS.gene062971	0.830098	3.55E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene062971	MS.gene75676	PPI
MS.gene062971	MS.gene40326	PPI
MS.gene062971	MS.gene50687	PPI
MS.gene062971	MS.gene014223	PPI
MS.gene062971	MS.gene79885	PPI
MS.gene062971	MS.gene014669	PPI
MS.gene062971	MS.gene057808	PPI
MS.gene062971	MS.gene047517	PPI
MS.gene062971	MS.gene01358	PPI
MS.gene062971	MS.gene062963	PPI
MS.gene062971	MS.gene063112	PPI
MS.gene062952	MS.gene062971	PPI
MS.gene062971	MS.gene68163	PPI
MS.gene062971	MS.gene057818	PPI
MS.gene23370	MS.gene062971	PPI
MS.gene50766	MS.gene062971	PPI
MS.gene062971	MS.gene79889	PPI
MS.gene062971	MS.gene045368	PPI
MS.gene003594	MS.gene062971	PPI
MS.gene062971	MS.gene40327	PPI
MS.gene50665	MS.gene062971	PPI
MS.gene062971	MS.gene045360	PPI
MS.gene062971	MS.gene014222	PPI
MS.gene062971	MS.gene79888	PPI
MS.gene003625	MS.gene062971	PPI
MS.gene062971	MS.gene75678	PPI
MS.gene062971	MS.gene75314	PPI
MS.gene062971	MS.gene01764	PPI
MS.gene062971	MS.gene031199	PPI
MS.gene062971	MS.gene75673	PPI
MS.gene062971	MS.gene057778	PPI
MS.gene50763	MS.gene062971	PPI
MS.gene045365	MS.gene062971	PPI
MS.gene062971	MS.gene68760	PPI
MS.gene062971	MS.gene031198	PPI
MS.gene062971	MS.gene50676	PPI
MS.gene50659	MS.gene062971	PPI
MS.gene062971	MS.gene50764	PPI
MS.gene062971	MS.gene003577	PPI
MS.gene062971	MS.gene75672	PPI
MS.gene062971	MS.gene75674	PPI
MS.gene031201	MS.gene062971	PPI
MS.gene062971	MS.gene50654	PPI
MS.gene062971	MS.gene50675	PPI
MS.gene77529	MS.gene062971	PPI
MS.gene062971	MS.gene014670	PPI
MS.gene062971	MS.gene062943	PPI
MS.gene062971	MS.gene77524	PPI
MS.gene062971	MS.gene68162	PPI
MS.gene062971	MS.gene045361	PPI
MS.gene062971	MS.gene79887	PPI
MS.gene062971	MS.gene75679	PPI
MS.gene062971	MS.gene68761	PPI
MS.gene062971	MS.gene40325	PPI
MS.gene062971	MS.gene75677	PPI
MS.gene062971	MS.gene50677	PPI
MS.gene062971	MS.gene79890	PPI
MS.gene062971	MS.gene50684	PPI
MS.gene003602	MS.gene062971	PPI
MS.gene062971	MS.gene057797	PPI
MS.gene062971	MS.gene003614	PPI
MS.gene062971	MS.gene014668	PPI
MS.gene062971	MS.gene77528	PPI
MS.gene062971	MS.gene75316	PPI
MS.gene062971	MS.gene79886	PPI
MS.gene062971	MS.gene014671	PPI
MS.gene062971	MS.gene50765	PPI
MS.gene062971	MS.gene003596	PPI
MS.gene062971	MS.gene014667	PPI
MS.gene062971	MS.gene003615	PPI
MS.gene062971	MS.gene062988	PPI
MS.gene062984	MS.gene062971	PPI
MS.gene062971	MS.gene23371	PPI
MS.gene062971	MS.gene062974	PPI
MS.gene062971	MS.gene003583	PPI
MS.gene062971	MS.gene062951	PPI
MS.gene062971	MS.gene057801	PPI
MS.gene062971	MS.gene003608	PPI
MS.gene062971	MS.gene77527	PPI
MS.gene062971	MS.gene003591	PPI
MS.gene062971	MS.gene79891	PPI
MS.gene062971	MS.gene057795	PPI
MS.gene062971	MS.gene045367	PPI
MS.gene062971	MS.gene045364	PPI
MS.gene062971	MS.gene045363	PPI
MS.gene062971	MS.gene75675	PPI
MS.gene062971	MS.gene062973	PPI
MS.gene003587	MS.gene062971	PPI
MS.gene062971	MS.gene50652	PPI
MS.gene062971	MS.gene002380	PPI
MS.gene003590	MS.gene062971	PPI
MS.gene062971	MS.gene68165	PPI
MS.gene062971	MS.gene77526	PPI
MS.gene062971	MS.gene77523	PPI
MS.gene062971	MS.gene045366	PPI
MS.gene062971	MS.gene045362	PPI
MS.gene062971	MS.gene23372	PPI
MS.gene062971	MS.gene057790	PPI
MS.gene062971	MS.gene75315	PPI
MS.gene062971	MS.gene68164	PPI
MS.gene062971	MS.gene062979	PPI
MS.gene062971	MS.gene003624	PPI
MS.gene062971	MS.gene68759	PPI
MS.gene062971	MS.gene003586	PPI
MS.gene062971	MS.gene003627	PPI
MS.gene062971	MS.gene031200	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062971.t1	MTR_4g072630	91.860	86	7	0	1	86	1	86	3.14e-57	171
MS.gene062971.t1	MTR_4g072465	88.372	86	10	0	1	86	1	86	1.21e-54	164
MS.gene062971.t1	MTR_4g072490	90.698	86	7	1	1	86	1	85	1.36e-54	164
MS.gene062971.t1	MTR_4g072740	89.535	86	8	1	1	86	1	85	2.37e-53	160
MS.gene062971.t1	MTR_4g072470	87.209	86	10	1	1	86	1	85	1.08e-49	151
MS.gene062971.t1	MTR_4g072510	91.860	86	7	0	1	86	1	86	2.39e-49	150
MS.gene062971.t1	MTR_4g072670	91.860	86	7	0	1	86	1	86	8.93e-49	149
MS.gene062971.t1	MTR_4g072370	81.818	88	14	1	1	86	1	88	1.34e-48	149
MS.gene062971.t1	MTR_4g072580	82.558	86	14	1	1	86	1	85	3.36e-48	147
MS.gene062971.t1	MTR_4g072540	89.535	86	9	0	1	86	1	86	8.57e-48	147
MS.gene062971.t1	MTR_4g072720	89.535	86	9	0	1	86	1	86	8.67e-48	147
MS.gene062971.t1	MTR_4g072830	81.609	87	14	1	1	85	1	87	1.52e-47	146
MS.gene062971.t1	MTR_4g072600	79.070	86	17	1	1	86	1	85	1.61e-45	141
MS.gene062971.t1	MTR_4g072610	80.233	86	15	1	1	86	1	84	2.76e-45	140
MS.gene062971.t1	MTR_3g084170	74.444	90	19	1	1	86	1	90	6.95e-45	139
MS.gene062971.t1	MTR_4g072650	79.070	86	16	1	1	86	1	84	1.21e-44	139
MS.gene062971.t1	MTR_4g072870	71.739	92	19	2	1	86	1	91	5.99e-44	137
MS.gene062971.t1	MTR_3g084150	71.111	90	22	1	1	86	1	90	7.12e-44	137
MS.gene062971.t1	MTR_3g084240	73.333	90	20	1	1	86	1	90	8.68e-44	137
MS.gene062971.t1	MTR_4g072330	75.281	89	18	2	1	86	1	88	9.75e-44	136
MS.gene062971.t1	MTR_3g084220	72.222	90	21	1	1	86	1	90	1.85e-43	136
MS.gene062971.t1	MTR_3g084180	70.000	90	23	1	1	86	1	90	7.13e-43	134
MS.gene062971.t1	MTR_5g008350	84.000	75	11	1	1	75	1	74	1.05e-42	134
MS.gene062971.t1	MTR_8g461410	68.889	90	24	1	1	86	1	90	2.58e-42	133
MS.gene062971.t1	MTR_4g072590	81.395	86	15	1	1	86	1	85	3.43e-42	132
MS.gene062971.t1	MTR_3g110038	71.111	90	22	1	1	86	1	90	6.26e-42	132
MS.gene062971.t1	MTR_3g110032	70.330	91	22	1	1	86	1	91	6.60e-42	132
MS.gene062971.t1	MTR_4g072450	82.558	86	14	1	1	86	1	85	1.05e-41	131
MS.gene062971.t1	MTR_4g072690	80.233	86	16	1	1	86	1	85	1.09e-41	131
MS.gene062971.t1	MTR_4g072240	68.132	91	24	1	1	86	1	91	1.33e-41	131
MS.gene062971.t1	MTR_4g050700	70.330	91	22	1	1	86	1	91	3.65e-41	130
MS.gene062971.t1	MTR_2g012410	70.330	91	22	1	1	86	1	91	3.65e-41	130
MS.gene062971.t1	MTR_4g072310	70.330	91	22	1	1	86	1	91	4.40e-41	130
MS.gene062971.t1	MTR_4g072380	77.011	87	18	2	1	86	1	86	9.48e-41	129
MS.gene062971.t1	MTR_4g072480	67.778	90	25	1	1	86	1	90	1.63e-40	128
MS.gene062971.t1	MTR_4g072300	65.934	91	26	1	1	86	1	91	1.77e-40	128
MS.gene062971.t1	MTR_4g072880	67.033	91	25	1	1	86	1	91	3.28e-40	128
MS.gene062971.t1	MTR_4g072890	65.934	91	26	1	1	86	1	91	3.45e-40	127
MS.gene062971.t1	MTR_3g110042	70.787	89	22	1	1	85	1	89	5.57e-40	127
MS.gene062971.t1	MTR_4g072680	67.778	90	25	1	1	86	1	90	1.21e-39	126
MS.gene062971.t1	MTR_4g072250	72.527	91	19	2	1	86	1	90	1.53e-39	126
MS.gene062971.t1	MTR_4g072260	64.835	91	27	1	1	86	1	91	1.72e-39	126
MS.gene062971.t1	MTR_4g072220	64.835	91	27	1	1	86	1	91	1.77e-39	126
MS.gene062971.t1	MTR_3g084260	68.132	91	24	1	1	86	1	91	1.92e-39	126
MS.gene062971.t1	MTR_4g072620	64.444	90	28	1	1	86	1	90	4.52e-39	125
MS.gene062971.t1	MTR_4g072850	68.478	92	23	1	1	86	1	92	9.79e-39	124
MS.gene062971.t1	MTR_4g072270	67.033	91	25	1	1	86	1	91	9.82e-39	124
MS.gene062971.t1	MTR_4g072570	67.778	90	25	1	1	86	1	90	9.97e-39	124
MS.gene062971.t1	MTR_4g072820	73.563	87	20	2	1	86	1	85	1.25e-38	124
MS.gene062971.t1	MTR_3g084250	67.778	90	25	1	1	86	1	90	1.30e-38	124
MS.gene062971.t1	MTR_4g072860	71.739	92	19	2	1	86	1	91	3.36e-38	122
MS.gene062971.t1	MTR_4g072460	65.556	90	27	1	1	86	1	90	3.88e-38	122
MS.gene062971.t1	MTR_4g072500	67.778	90	25	1	1	86	1	90	6.87e-38	122
MS.gene062971.t1	MTR_4g072730	63.333	90	29	1	1	86	1	90	1.01e-37	121
MS.gene062971.t1	MTR_4g072530	66.667	90	26	1	1	86	1	90	3.36e-37	120
MS.gene062971.t1	MTR_3g117630	75.342	73	18	0	14	86	18	90	5.52e-37	119
MS.gene062971.t1	MTR_3g084190	68.889	90	24	1	1	86	1	90	7.93e-37	119
MS.gene062971.t1	MTR_4g072640	67.033	91	24	2	1	86	1	90	8.19e-37	119
MS.gene062971.t1	MTR_3g084210	66.667	90	26	1	1	86	1	90	1.65e-36	118
MS.gene062971.t1	MTR_4g072230	67.033	91	23	2	1	86	1	89	3.10e-36	117
MS.gene062971.t1	MTR_4g072660	63.953	86	30	1	1	86	1	85	4.01e-36	117
MS.gene062971.t1	MTR_8g461420	67.778	90	25	1	1	86	1	90	4.74e-36	117
MS.gene062971.t1	MTR_3g084160	67.778	90	25	1	1	86	1	90	1.34e-35	116
MS.gene062971.t1	MTR_3g110045	69.318	88	23	1	3	86	62	149	1.89e-35	117
MS.gene062971.t1	MTR_3g084230	66.667	90	26	1	1	86	1	90	2.51e-35	115
MS.gene062971.t1	MTR_5g008370	65.556	90	27	1	1	86	1	90	6.57e-35	116
MS.gene062971.t1	MTR_5g008360	67.949	78	25	0	9	86	4	81	1.17e-34	113
MS.gene062971.t1	MTR_4g072940	64.444	90	26	1	3	86	33	122	1.43e-33	112
MS.gene062971.t1	MTR_3g084200	69.444	72	18	1	1	68	1	72	8.32e-32	107
MS.gene062971.t1	MTR_4g072770	60.465	86	28	1	1	86	1	80	1.22e-30	103
MS.gene062971.t1	MTR_4g072560	51.546	97	35	3	1	85	1	97	2.70e-30	103
MS.gene062971.t1	MTR_4g072980	54.348	92	35	2	1	85	1	92	6.40e-30	102
MS.gene062971.t1	MTR_4g072910	62.338	77	28	1	10	86	25	100	2.32e-29	100
MS.gene062971.t1	MTR_4g072550	63.380	71	26	0	16	86	31	101	1.09e-28	99.4
MS.gene062971.t1	MTR_3g117640	63.235	68	24	1	20	86	33	100	2.21e-28	98.6
MS.gene062971.t1	MTR_4g072290	59.302	86	26	2	1	86	1	77	5.24e-27	94.4
MS.gene062971.t1	MTR_4g072750	65.753	73	19	2	1	67	1	73	4.28e-25	89.7
MS.gene062971.t1	MTR_4g072280	57.333	75	27	1	1	70	1	75	4.55e-25	89.4
MS.gene062971.t1	MTR_3g110035	62.500	64	24	0	23	86	73	136	1.22e-24	90.1
MS.gene062971.t1	MTR_3g117610	60.000	65	25	1	19	83	43	106	8.41e-23	84.7
MS.gene062971.t1	MTR_3g113310	55.224	67	29	1	19	85	40	105	4.32e-22	82.8
MS.gene062971.t1	MTR_6g077850	53.731	67	31	0	20	86	33	99	4.83e-22	82.4
MS.gene062971.t1	MTR_4g072190	52.055	73	34	1	11	83	26	97	8.61e-22	81.6
MS.gene062971.t1	MTR_4g072930	49.383	81	36	2	11	86	30	110	2.57e-21	80.9
MS.gene062971.t1	MTR_8g461400	48.889	90	16	2	1	86	1	64	1.31e-20	77.8
MS.gene062971.t1	MTR_4g072840	51.724	87	14	3	1	86	1	60	2.67e-19	74.3
MS.gene062971.t1	MTR_5g021820	45.238	84	43	2	4	85	21	103	5.44e-19	74.7
MS.gene062971.t1	MTR_8g076040	53.125	64	29	1	20	83	40	102	3.76e-18	72.4
MS.gene062971.t1	MTR_2g043960	55.932	59	25	1	20	78	75	132	2.15e-17	72.0
MS.gene062971.t1	MTR_4g124750	54.237	59	26	1	20	78	68	125	3.69e-17	71.2
MS.gene062971.t1	MTR_1g094750	51.613	62	29	1	20	81	49	109	2.08e-15	65.9
MS.gene062971.t1	MTR_1g009150	49.275	69	34	1	13	81	63	130	3.72e-15	66.6
MS.gene062971.t1	MTR_1g061570	46.835	79	39	2	5	81	1	78	4.14e-15	65.5
MS.gene062971.t1	MTR_5g008380	90.625	32	3	0	55	86	246	277	8.34e-15	67.4
MS.gene062971.t1	MTR_3g105900	80.556	36	7	0	20	55	1171	1206	9.67e-15	67.8
MS.gene062971.t1	MTR_4g005310	48.387	62	31	1	21	81	62	123	1.26e-14	64.7
MS.gene062971.t1	MTR_7g118010	47.692	65	31	2	21	83	23	86	2.27e-14	62.8
MS.gene062971.t1	MTR_7g101740	48.438	64	32	1	20	83	39	101	2.72e-14	63.2
MS.gene062971.t1	MTR_1g063950	45.161	62	33	1	20	81	47	107	5.79e-14	62.4
MS.gene062971.t1	MTR_4g025830	42.254	71	37	2	18	85	76	145	1.18e-13	62.4
MS.gene062971.t1	MTR_1g024085	50.847	59	28	1	20	78	36	93	1.30e-13	62.0
MS.gene062971.t1	MTR_4g005320	47.541	61	31	1	21	81	70	129	1.45e-13	62.4
MS.gene062971.t1	MTR_3g092220	43.478	69	36	2	12	78	24	91	1.47e-13	61.2
MS.gene062971.t1	MTR_4g072160	44.000	75	40	2	8	81	23	96	8.16e-13	59.7
MS.gene062971.t1	MTR_3g109160	50.820	61	29	1	21	81	69	128	1.43e-12	59.7
MS.gene062971.t1	MTR_8g461210	41.772	79	41	2	4	78	14	91	1.65e-12	58.5
MS.gene062971.t1	MTR_8g026730	42.857	63	33	2	21	81	27	88	4.53e-12	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062971.t1	AT4G38840	70.588	68	19	1	20	86	32	99	7.08e-33	109
MS.gene062971.t1	AT4G34800	58.333	84	32	1	1	81	1	84	9.79e-31	104
MS.gene062971.t1	AT5G18080	62.162	74	27	1	14	86	17	90	2.45e-30	103
MS.gene062971.t1	AT2G21210	53.086	81	36	1	8	86	15	95	1.02e-29	101
MS.gene062971.t1	AT5G18020	60.811	74	28	1	14	86	17	90	1.77e-29	100
MS.gene062971.t1	AT5G18050	60.256	78	27	2	10	86	16	90	2.47e-29	100
MS.gene062971.t1	AT4G34810	62.821	78	25	1	10	83	37	114	2.65e-29	101
MS.gene062971.t1	AT4G38825	60.256	78	25	2	10	86	17	89	2.74e-29	100
MS.gene062971.t1	AT5G18060	66.667	66	21	1	22	86	25	90	3.04e-29	100
MS.gene062971.t1	AT4G38850	58.537	82	26	2	8	86	13	89	4.34e-29	99.8
MS.gene062971.t1	AT5G18030	59.494	79	28	2	9	86	13	88	4.71e-29	99.8
MS.gene062971.t1	AT2G21210	53.086	81	36	1	8	86	82	162	5.81e-29	102
MS.gene062971.t1	AT5G18010	59.459	74	29	1	14	86	17	90	1.35e-28	98.6
MS.gene062971.t1	AT2G21200	59.722	72	28	1	15	85	15	86	3.94e-28	97.4
MS.gene062971.t1	AT3G03840	56.410	78	32	1	11	86	17	94	3.11e-26	92.8
MS.gene062971.t1	AT3G03820	54.430	79	33	1	11	86	17	95	4.85e-26	92.4
MS.gene062971.t1	AT4G34770	55.952	84	35	1	5	86	19	102	1.42e-25	91.3
MS.gene062971.t1	AT3G03850	62.687	67	23	1	22	86	26	92	1.79e-25	90.9
MS.gene062971.t1	AT4G13790	48.235	85	41	2	3	85	8	91	4.28e-25	89.7
MS.gene062971.t1	AT3G03830	56.962	79	28	2	11	86	17	92	1.72e-24	88.2
MS.gene062971.t1	AT4G34790	65.672	67	20	2	21	84	39	105	3.39e-24	88.2
MS.gene062971.t1	AT4G38860	49.412	85	41	1	4	86	21	105	2.46e-23	85.9
MS.gene062971.t1	AT2G21220	48.780	82	39	2	4	83	21	101	1.16e-21	81.6
MS.gene062971.t1	AT4G34780	57.143	70	27	1	19	85	26	95	1.32e-21	81.3
MS.gene062971.t1	AT1G75580	58.209	67	27	1	19	85	42	107	2.65e-21	80.9
MS.gene062971.t1	AT4G34760	56.923	65	27	1	19	83	41	104	1.11e-20	79.0
MS.gene062971.t1	AT2G16580	55.385	65	28	1	19	83	42	105	5.67e-20	77.4
MS.gene062971.t1	AT4G36110	53.125	64	29	1	20	83	39	101	2.02e-18	73.2
MS.gene062971.t1	AT1G19830	58.333	60	24	1	19	78	46	104	2.84e-18	73.2
MS.gene062971.t1	AT3G43120	54.237	59	26	1	20	78	78	135	7.76e-18	73.2
MS.gene062971.t1	AT2G18010	51.562	64	30	1	20	83	47	109	1.08e-17	71.6
MS.gene062971.t1	AT5G20810	55.932	59	25	1	20	78	78	135	4.43e-17	71.6
MS.gene062971.t1	AT5G20810	55.932	59	25	1	20	78	78	135	7.37e-17	71.2
MS.gene062971.t1	AT5G66260	51.515	66	31	1	21	86	34	98	3.81e-15	64.7
MS.gene062971.t1	AT3G20220	51.613	62	28	2	21	81	47	107	5.45e-15	65.1
MS.gene062971.t1	AT2G37030	49.206	63	31	1	20	82	48	109	3.90e-14	62.8
MS.gene062971.t1	AT3G51200	45.122	82	39	3	5	81	19	99	6.06e-14	62.0
MS.gene062971.t1	AT1G75590	49.153	59	29	1	20	78	41	98	2.32e-13	61.6
MS.gene062971.t1	AT5G10990	44.000	75	36	2	4	78	29	97	4.72e-13	60.8
MS.gene062971.t1	AT3G61900	40.506	79	42	3	12	86	20	97	4.80e-13	60.5
MS.gene062971.t1	AT4G34750	42.188	64	36	1	20	83	36	98	5.40e-13	60.5
MS.gene062971.t1	AT4G34750	42.188	64	36	1	20	83	36	98	5.40e-13	60.5
MS.gene062971.t1	AT2G46690	41.558	77	41	2	5	78	8	83	7.68e-13	59.7
MS.gene062971.t1	AT1G19840	45.333	75	35	2	4	78	29	97	1.56e-12	59.3
MS.gene062971.t1	AT3G53250	44.444	63	31	1	20	82	51	109	1.72e-12	58.5
MS.gene062971.t1	AT3G53250	44.444	63	31	1	20	82	82	140	3.72e-12	58.5
MS.gene062971.t1	AT4G31320	47.541	61	31	1	21	81	80	139	7.16e-12	58.5
MS.gene062971.t1	AT4G00880	42.308	78	39	3	3	78	13	86	1.23e-11	56.6
MS.gene062971.t1	AT2G24400	49.180	61	30	1	21	81	64	123	1.56e-11	57.4
MS.gene062971.t1	AT2G45210	44.262	61	30	2	16	73	74	133	3.47e-11	56.2
MS.gene062971.t1	AT4G12410	44.286	70	31	3	21	83	76	144	5.11e-11	55.5
MS.gene062971.t1	AT3G60690	41.176	68	36	2	21	85	88	154	6.67e-11	55.5

Find 21 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACTTTGGCTCAACAATTCT+TGG	0.170812	4.2:-35460441	None:intergenic
ACAATTCTTGGAATGATGTT+TGG	0.349631	4.2:-35460429	None:intergenic
GGCATCATCTTCAAAAGGTT+TGG	0.355226	4.2:+35460330	MS.gene062971:CDS
GTTTGGTTCAAGTATGATAT+AGG	0.375326	4.2:-35460412	None:intergenic
ATTCGAATTGTTCCTCACTT+TGG	0.477869	4.2:-35460456	None:intergenic
TCAAGGGCATCATCTTCAAA+AGG	0.490872	4.2:+35460325	MS.gene062971:CDS
TACCAAGTATCATCAGATCA+AGG	0.490956	4.2:+35460308	MS.gene062971:CDS
AAAAGGTTTGGATGTGCCAA+AGG	0.498708	4.2:+35460342	MS.gene062971:CDS
TTCGAATATGATCATCCAAT+GGG	0.511444	4.2:+35460472	MS.gene062971:CDS
GCCCTTGATCTGATGATACT+TGG	0.512708	4.2:-35460310	None:intergenic
TACACTGCTAGATAGCCCTT+TGG	0.516931	4.2:-35460358	None:intergenic
ATTCGAATATGATCATCCAA+TGG	0.544520	4.2:+35460471	MS.gene062971:CDS
AAAGGTTTGGATGTGCCAAA+GGG	0.563932	4.2:+35460343	MS.gene062971:CDS
AAGAAAACTTCTTCTCTGCA+AGG	0.584904	4.2:-35460508	None:intergenic
ACCAAGTATCATCAGATCAA+GGG	0.600732	4.2:+35460309	MS.gene062971:CDS
GGAATAGTGAGACCACCCAT+TGG	0.603922	4.2:-35460487	None:intergenic
AGAATTGTTGAGCCAAAGTG+AGG	0.628113	4.2:+35460444	MS.gene062971:CDS
CTAAATTCAATTCAAGTGAG+AGG	0.633235	4.2:-35460539	None:intergenic
GAATATGATCATCCAATGGG+TGG	0.654072	4.2:+35460475	MS.gene062971:CDS
GGCTATCTAGCAGTGTACGT+AGG	0.714634	4.2:+35460364	MS.gene062971:CDS
ACGTAGGAGAGAAAATGAAG+CGG	0.744637	4.2:+35460380	MS.gene062971:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ACAATTCTTGGAATGATGTT+TGG	-	chr4.2:35460432-35460451	None:intergenic	30.0%
	ATTCGAATATGATCATCCAA+TGG	+	chr4.2:35460471-35460490	MS.gene062971:CDS	30.0%
	TTCGAATATGATCATCCAAT+GGG	+	chr4.2:35460472-35460491	MS.gene062971:CDS	30.0%
!	GTTTGGTTCAAGTATGATAT+AGG	-	chr4.2:35460415-35460434	None:intergenic	30.0%
	AAGAAAACTTCTTCTCTGCA+AGG	-	chr4.2:35460511-35460530	None:intergenic	35.0%
	ACCAAGTATCATCAGATCAA+GGG	+	chr4.2:35460309-35460328	MS.gene062971:CDS	35.0%
	ATTCGAATTGTTCCTCACTT+TGG	-	chr4.2:35460459-35460478	None:intergenic	35.0%
	TACCAAGTATCATCAGATCA+AGG	+	chr4.2:35460308-35460327	MS.gene062971:CDS	35.0%
	AAAAGGTTTGGATGTGCCAA+AGG	+	chr4.2:35460342-35460361	MS.gene062971:CDS	40.0%
	AAAGGTTTGGATGTGCCAAA+GGG	+	chr4.2:35460343-35460362	MS.gene062971:CDS	40.0%
	ACGTAGGAGAGAAAATGAAG+CGG	+	chr4.2:35460380-35460399	MS.gene062971:CDS	40.0%
	AGAATTGTTGAGCCAAAGTG+AGG	+	chr4.2:35460444-35460463	MS.gene062971:CDS	40.0%
	GAATATGATCATCCAATGGG+TGG	+	chr4.2:35460475-35460494	MS.gene062971:CDS	40.0%
	GGCATCATCTTCAAAAGGTT+TGG	+	chr4.2:35460330-35460349	MS.gene062971:CDS	40.0%
!	CACTTTGGCTCAACAATTCT+TGG	-	chr4.2:35460444-35460463	None:intergenic	40.0%
!!	TCAAGGGCATCATCTTCAAA+AGG	+	chr4.2:35460325-35460344	MS.gene062971:CDS	40.0%
	GCCCTTGATCTGATGATACT+TGG	-	chr4.2:35460313-35460332	None:intergenic	45.0%
	TACACTGCTAGATAGCCCTT+TGG	-	chr4.2:35460361-35460380	None:intergenic	45.0%
	GGAATAGTGAGACCACCCAT+TGG	-	chr4.2:35460490-35460509	None:intergenic	50.0%
	GGCTATCTAGCAGTGTACGT+AGG	+	chr4.2:35460364-35460383	MS.gene062971:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35460295	35460555	35460295	ID=MS.gene062971
chr4.2	mRNA	35460295	35460555	35460295	ID=MS.gene062971.t1;Parent=MS.gene062971
chr4.2	exon	35460295	35460555	35460295	ID=MS.gene062971.t1.exon1;Parent=MS.gene062971.t1
chr4.2	CDS	35460295	35460555	35460295	ID=cds.MS.gene062971.t1;Parent=MS.gene062971.t1

Gene Sequence	>MS.gene062971 ATGGGTTTTCGTTTACCAAGTATCATCAGATCAAGGGCATCATCTTCAAAAGGTTTGGATGTGCCAAAGGGCTATCTAGCAGTGTACGTAGGAGAGAAAATGAAGCGGTTTGTGATTCCTATATCATACTTGAACCAAACATCATTCCAAGAATTGTTGAGCCAAAGTGAGGAACAATTCGAATATGATCATCCAATGGGTGGTCTCACTATTCCTTGCAGAGAAGAAGTTTTCTTAGATATCACCTCTCACTTGAATTGA
Protein sequence	>MS.gene062971.t1 MGFRLPSIIRSRASSSKGLDVPKGYLAVYVGEKMKRFVIPISYLNQTSFQELLSQSEEQFEYDHPMGGLTIPCREEVFLDITSHLN