Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072998.t1 | XP_003603523.2 | 96.5 | 549 | 19 | 0 | 1 | 549 | 47 | 595 | 0.00E+00 | 1110.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072998.t1 | Q38JU2 | 69.3 | 534 | 163 | 1 | 13 | 545 | 40 | 573 | 4.0e-229 | 795.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072998.t1 | G7JCC1 | 96.5 | 549 | 19 | 0 | 1 | 549 | 47 | 595 | 0.0e+00 | 1110.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene072998 | 0.814517 | 1.48E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene072998 | 0.805014 | 1.64E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene072998 | 0.802999 | 4.30E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene072998 | 0.819982 | 8.73E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene072998 | 0.853496 | 2.30E-61 | -1.69E-46 |
| MS.gene049396 | MS.gene072998 | 0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene072998 | 0.83325 | 5.94E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene072998 | 0.827293 | 1.69E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene072998 | 0.82183 | 3.28E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene072998 | 0.806736 | 7.12E-50 | -1.69E-46 |
| MS.gene050400 | MS.gene072998 | 0.80657 | 7.71E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene072998 | 0.817538 | 3.13E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene072998 | 0.820233 | 7.64E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene072998 | 0.835272 | 1.85E-56 | -1.69E-46 |
| MS.gene050647 | MS.gene072998 | -0.808567 | 2.91E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene072998 | 0.834487 | 2.91E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene072998 | 0.838344 | 3.04E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene072998 | 0.84189 | 3.61E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene072998 | 0.811356 | 7.29E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene072998 | 0.860745 | 1.67E-63 | -1.69E-46 |
| MS.gene05081 | MS.gene072998 | 0.857924 | 1.17E-62 | -1.69E-46 |
| MS.gene050950 | MS.gene072998 | 0.844737 | 6.28E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene072998 | 0.853535 | 2.24E-61 | -1.69E-46 |
| MS.gene051255 | MS.gene072998 | 0.839887 | 1.21E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene072998 | 0.829665 | 4.53E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene072998 | 0.85062 | 1.51E-60 | -1.69E-46 |
| MS.gene051525 | MS.gene072998 | 0.840895 | 6.60E-58 | -1.69E-46 |
| MS.gene051605 | MS.gene072998 | 0.819213 | 1.31E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene072998 | 0.858482 | 7.99E-63 | -1.69E-46 |
| MS.gene051838 | MS.gene072998 | 0.840552 | 8.12E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene072998 | 0.820297 | 7.39E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene072998 | 0.84172 | 4.00E-58 | -1.69E-46 |
| MS.gene052134 | MS.gene072998 | 0.80088 | 1.17E-48 | -1.69E-46 |
| MS.gene052136 | MS.gene072998 | 0.815692 | 8.11E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene072998 | 0.839882 | 1.21E-57 | -1.69E-46 |
| MS.gene052253 | MS.gene072998 | 0.80728 | 5.46E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene072998 | 0.833465 | 5.25E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene072998 | 0.813588 | 2.37E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene072998 | 0.805512 | 1.29E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene072998 | 0.823067 | 1.69E-53 | -1.69E-46 |
| MS.gene052414 | MS.gene072998 | 0.851892 | 6.60E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene072998 | 0.853559 | 2.21E-61 | -1.69E-46 |
| MS.gene052469 | MS.gene072998 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene072998 | 0.811284 | 7.56E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene072998 | 0.826662 | 2.40E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene072998 | 0.836571 | 8.66E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene072998 | 0.808811 | 2.58E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene072998 | 0.808178 | 3.52E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene072998 | 0.813241 | 2.83E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene072998 | 0.866289 | 3.18E-65 | -1.69E-46 |
| MS.gene052872 | MS.gene072998 | 0.861654 | 8.81E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene072998 | 0.810246 | 1.27E-50 | -1.69E-46 |
| MS.gene052999 | MS.gene072998 | 0.805866 | 1.09E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene072998 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene053169 | MS.gene072998 | 0.825433 | 4.70E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene072998 | 0.809493 | 1.84E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene072998 | 0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene072998 | 0.804522 | 2.08E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene072998 | 0.827477 | 1.53E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene072998 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene072998 | 0.825119 | 5.58E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene072998 | 0.817336 | 3.48E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene072998 | 0.804062 | 2.59E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene072998 | 0.865464 | 5.79E-65 | -1.69E-46 |
| MS.gene053912 | MS.gene072998 | 0.814411 | 1.56E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene072998 | 0.818095 | 2.34E-52 | -1.69E-46 |
| MS.gene054556 | MS.gene072998 | 0.818103 | 2.33E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene072998 | 0.805563 | 1.26E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene072998 | 0.853226 | 2.75E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene072998 | 0.848911 | 4.53E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene072998 | 0.833486 | 5.19E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene072998 | 0.865773 | 4.63E-65 | -1.69E-46 |
| MS.gene055289 | MS.gene072998 | 0.808268 | 3.37E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene072998 | 0.821523 | 3.86E-53 | -1.69E-46 |
| MS.gene055539 | MS.gene072998 | 0.829596 | 4.71E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene072998 | 0.819591 | 1.07E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene072998 | 0.854051 | 1.59E-61 | -1.69E-46 |
| MS.gene055744 | MS.gene072998 | 0.852035 | 6.01E-61 | -1.69E-46 |
| MS.gene055909 | MS.gene072998 | 0.834704 | 2.57E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene072998 | 0.838435 | 2.88E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene072998 | 0.817827 | 2.69E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene072998 | 0.835275 | 1.84E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene072998 | 0.821552 | 3.80E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene072998 | 0.804836 | 1.78E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene072998 | 0.800122 | 1.67E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene072998 | 0.843563 | 1.30E-58 | -1.69E-46 |
| MS.gene056796 | MS.gene072998 | 0.834035 | 3.78E-56 | -1.69E-46 |
| MS.gene056877 | MS.gene072998 | 0.819967 | 8.79E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene072998 | 0.817616 | 3.01E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene072998 | 0.805697 | 1.18E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene072998 | 0.850421 | 1.72E-60 | -1.69E-46 |
| MS.gene057076 | MS.gene072998 | 0.835187 | 1.94E-56 | -1.69E-46 |
| MS.gene057124 | MS.gene072998 | 0.815523 | 8.85E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene072998 | 0.820185 | 7.84E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene072998 | 0.819525 | 1.11E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene072998 | 0.80759 | 4.69E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene072998 | 0.806922 | 6.50E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene072998 | 0.824945 | 6.13E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene072998 | 0.842078 | 3.22E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene072998 | 0.803367 | 3.61E-49 | -1.69E-46 |
| MS.gene05806 | MS.gene072998 | 0.807713 | 4.42E-50 | -1.69E-46 |
| MS.gene058090 | MS.gene072998 | 0.81605 | 6.75E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene072998 | 0.862531 | 4.74E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene072998 | 0.815188 | 1.05E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene072998 | 0.840379 | 9.01E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene072998 | 0.837772 | 4.27E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene072998 | 0.832615 | 8.54E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene072998 | 0.854123 | 1.52E-61 | -1.69E-46 |
| MS.gene058700 | MS.gene072998 | 0.854112 | 1.53E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene072998 | 0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene05883 | MS.gene072998 | 0.814547 | 1.46E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene072998 | 0.810954 | 8.92E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene072998 | 0.83487 | 2.33E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene072998 | 0.834139 | 3.56E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene072998 | 0.801899 | 7.24E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene072998 | 0.800426 | 1.45E-48 | -1.69E-46 |
| MS.gene059305 | MS.gene072998 | 0.82575 | 3.95E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene072998 | 0.850393 | 1.75E-60 | -1.69E-46 |
| MS.gene059455 | MS.gene072998 | 0.810705 | 1.01E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene072998 | 0.816413 | 5.60E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene072998 | 0.828089 | 1.09E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene072998 | 0.830853 | 2.32E-55 | -1.69E-46 |
| MS.gene059680 | MS.gene072998 | 0.807835 | 4.16E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene072998 | 0.83001 | 3.74E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene072998 | 0.814751 | 1.31E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene072998 | 0.819923 | 9.00E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene072998 | 0.828309 | 9.66E-55 | -1.69E-46 |
| MS.gene059807 | MS.gene072998 | 0.818164 | 2.26E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene072998 | 0.811591 | 6.49E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene072998 | 0.800966 | 1.12E-48 | -1.69E-46 |
| MS.gene060372 | MS.gene072998 | 0.813204 | 2.88E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene072998 | 0.802927 | 4.45E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene072998 | 0.809512 | 1.82E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene072998 | 0.818022 | 2.43E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene072998 | 0.843602 | 1.27E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene072998 | 0.85989 | 3.02E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene072998 | 0.828363 | 9.37E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene072998 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene072998 | 0.804081 | 2.56E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene072998 | 0.86009 | 2.63E-63 | -1.69E-46 |
| MS.gene061200 | MS.gene072998 | 0.804835 | 1.79E-49 | -1.69E-46 |
| MS.gene061231 | MS.gene072998 | 0.807096 | 5.97E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072998.t1 | MTR_3g108700 | 96.539 | 549 | 19 | 0 | 1 | 549 | 47 | 595 | 0.0 | 1114 |
| MS.gene072998.t1 | MTR_1g088420 | 34.367 | 387 | 208 | 10 | 5 | 366 | 74 | 439 | 2.86e-60 | 206 |
| MS.gene072998.t1 | MTR_4g011370 | 28.392 | 479 | 303 | 13 | 37 | 500 | 1 | 454 | 5.77e-40 | 152 |
| MS.gene072998.t1 | MTR_4g011370 | 28.452 | 478 | 302 | 13 | 38 | 500 | 2 | 454 | 5.79e-40 | 152 |
| MS.gene072998.t1 | MTR_4g011370 | 26.625 | 477 | 288 | 13 | 38 | 500 | 2 | 430 | 6.57e-32 | 129 |
| MS.gene072998.t1 | MTR_1g043190 | 27.254 | 477 | 291 | 15 | 52 | 508 | 4 | 444 | 8.35e-28 | 118 |
| MS.gene072998.t1 | MTR_1g076190 | 28.631 | 482 | 276 | 19 | 53 | 508 | 7 | 446 | 3.85e-25 | 110 |
| MS.gene072998.t1 | MTR_1g076190 | 28.631 | 482 | 276 | 19 | 53 | 508 | 7 | 446 | 4.50e-25 | 109 |
| MS.gene072998.t1 | MTR_5g063920 | 38.621 | 145 | 86 | 2 | 380 | 521 | 155 | 299 | 1.12e-17 | 86.7 |
| MS.gene072998.t1 | MTR_5g063920 | 41.538 | 130 | 75 | 1 | 380 | 508 | 319 | 448 | 1.36e-17 | 86.7 |
| MS.gene072998.t1 | MTR_5g063920 | 41.538 | 130 | 75 | 1 | 380 | 508 | 319 | 448 | 1.36e-17 | 86.7 |
| MS.gene072998.t1 | MTR_4g036495 | 24.513 | 359 | 171 | 11 | 47 | 339 | 34 | 358 | 4.27e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072998.t1 | AT5G24850 | 69.533 | 535 | 144 | 4 | 17 | 547 | 48 | 567 | 0.0 | 773 |
| MS.gene072998.t1 | AT2G47590 | 37.758 | 339 | 171 | 10 | 55 | 373 | 120 | 438 | 5.27e-59 | 202 |
| MS.gene072998.t1 | AT3G15620 | 30.185 | 487 | 302 | 14 | 31 | 501 | 6 | 470 | 4.54e-45 | 167 |
| MS.gene072998.t1 | AT3G15620 | 30.493 | 446 | 272 | 14 | 31 | 460 | 6 | 429 | 5.21e-39 | 148 |
| MS.gene072998.t1 | AT1G04400 | 27.869 | 488 | 271 | 21 | 53 | 506 | 8 | 448 | 2.34e-25 | 110 |
| MS.gene072998.t1 | AT1G04400 | 27.869 | 488 | 271 | 21 | 53 | 506 | 8 | 448 | 2.34e-25 | 110 |
| MS.gene072998.t1 | AT4G08920 | 40.769 | 130 | 76 | 1 | 380 | 508 | 324 | 453 | 6.08e-19 | 90.9 |
| MS.gene072998.t1 | AT4G25290 | 30.374 | 214 | 106 | 10 | 51 | 257 | 36 | 213 | 2.00e-13 | 73.6 |
Find 141 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTCTAGTTAAAGCTTA+TGG | 0.210011 | 3.4:-94130756 | MS.gene072998:CDS |
| TATGATCCATGTTCTAATTA+TGG | 0.211165 | 3.4:-94127849 | MS.gene072998:CDS |
| GCCCCAAACAAACTGTAATT+TGG | 0.214415 | 3.4:+94130466 | None:intergenic |
| ACCACTCCTCTTGGTGTTAT+TGG | 0.215639 | 3.4:+94131768 | None:intergenic |
| AGGCCCTAACATCCCATTTC+GGG | 0.262358 | 3.4:+94129201 | None:intergenic |
| TTCCTTCCTAGTTCGTGATA+TGG | 0.276629 | 3.4:-94127922 | MS.gene072998:CDS |
| TGCTATGGAGGGATTACTTT+AGG | 0.277607 | 3.4:-94128619 | MS.gene072998:CDS |
| TCATAGACACTTACTTGTTT+TGG | 0.288360 | 3.4:+94127458 | None:intergenic |
| AATTATGGAAACTGGACTTA+TGG | 0.288686 | 3.4:-94127834 | MS.gene072998:CDS |
| ACAATTTCTCCTTGAATGTT+TGG | 0.290513 | 3.4:-94130853 | MS.gene072998:CDS |
| ACCCCAAATTACAGTTTGTT+TGG | 0.297200 | 3.4:-94130469 | MS.gene072998:CDS |
| TAGAAACGATCTCAGAGTTT+TGG | 0.300537 | 3.4:-94131722 | MS.gene072998:CDS |
| CAAATTGTGCGTCTCAAGTT+TGG | 0.302358 | 3.4:-94127226 | MS.gene072998:CDS |
| GCAGAATATATGAATACTTT+TGG | 0.304882 | 3.4:-94129688 | MS.gene072998:CDS |
| CCCCAAATTACAGTTTGTTT+GGG | 0.309463 | 3.4:-94130468 | MS.gene072998:CDS |
| TCTTCCTTCATTGGAGCTGC+TGG | 0.313360 | 3.4:-94129889 | MS.gene072998:CDS |
| GAGACCCGAAATGGGATGTT+AGG | 0.314710 | 3.4:-94129205 | MS.gene072998:CDS |
| TATGCAACATATTCACCTTC+TGG | 0.320195 | 3.4:+94127316 | None:intergenic |
| AGGTTTCTATCAGTCAAATA+TGG | 0.320199 | 3.4:-94128599 | MS.gene072998:CDS |
| TTTGCAACCACTTACCATTT+CGG | 0.320810 | 3.4:-94131625 | MS.gene072998:CDS |
| ATGGTTTGAGACATGTCTTT+TGG | 0.325858 | 3.4:-94127874 | MS.gene072998:CDS |
| AGATGCTGAGGGTTCGGATT+TGG | 0.332286 | 3.4:+94131873 | None:intergenic |
| CCCCAAACAAACTGTAATTT+GGG | 0.334412 | 3.4:+94130467 | None:intergenic |
| TTGGGGATGTCTTCCTTCAT+TGG | 0.335648 | 3.4:-94129898 | MS.gene072998:CDS |
| TTGAACAACCCATACCTATA+TGG | 0.349032 | 3.4:+94128564 | None:intergenic |
| CGACTAGTAGACATAATAAT+GGG | 0.355841 | 3.4:-94127201 | MS.gene072998:CDS |
| GAGGCCCTAACATCCCATTT+CGG | 0.356933 | 3.4:+94129200 | None:intergenic |
| TCCTTCCTAGTTCGTGATAT+GGG | 0.370362 | 3.4:-94127921 | MS.gene072998:CDS |
| CATGTTCTAATTATGGAAAC+TGG | 0.376771 | 3.4:-94127842 | MS.gene072998:CDS |
| CGAAGAAGATGCTGAGGGTT+CGG | 0.386786 | 3.4:+94131867 | None:intergenic |
| AGACATCCCCAATCCTCAAT+TGG | 0.387677 | 3.4:+94129909 | None:intergenic |
| GACATCCCCAATCCTCAATT+GGG | 0.392767 | 3.4:+94129910 | None:intergenic |
| AAGTGTACCTTTGGAATGTT+TGG | 0.395594 | 3.4:+94131791 | None:intergenic |
| GAGGAAGAATCTAATGAAAC+GGG | 0.397025 | 3.4:-94130823 | MS.gene072998:CDS |
| CTTCTTCTGAATCAGGAGTC+GGG | 0.411886 | 3.4:-94127514 | MS.gene072998:intron |
| TCCTGGAGAGATGGTTGTAC+AGG | 0.423794 | 3.4:-94128315 | MS.gene072998:CDS |
| ACGACTAGTAGACATAATAA+TGG | 0.424104 | 3.4:-94127202 | MS.gene072998:CDS |
| CGAGGATCAATACAATAAAC+AGG | 0.433338 | 3.4:+94131652 | None:intergenic |
| CGAAATTGAGTATAAACATC+TGG | 0.434912 | 3.4:+94130395 | None:intergenic |
| CGTACCTTTACCACTCCTCT+TGG | 0.440611 | 3.4:+94131759 | None:intergenic |
| GTACCATCTGACGGATCCGC+TGG | 0.440891 | 3.4:-94130515 | MS.gene072998:CDS |
| CTTCCTTCATTGGAGCTGCT+GGG | 0.442472 | 3.4:-94129888 | MS.gene072998:CDS |
| GGCAAACAAGTGACATCAAA+AGG | 0.455437 | 3.4:+94130416 | None:intergenic |
| TTCTCGCCATGGCTTGCATC+CGG | 0.458764 | 3.4:-94129163 | MS.gene072998:CDS |
| TGTTATTGGAAGTGTACCTT+TGG | 0.459247 | 3.4:+94131782 | None:intergenic |
| ATGCAACATATTCACCTTCT+GGG | 0.459620 | 3.4:+94127317 | None:intergenic |
| CTGAAATATCGGTCTTCTCT+AGG | 0.465039 | 3.4:+94127485 | None:intergenic |
| CCTCTTGATGTAGGTTAACA+AGG | 0.467398 | 3.4:-94129747 | MS.gene072998:intron |
| AGAAACTTGTAGCGAAGAGC+TGG | 0.468024 | 3.4:-94130579 | MS.gene072998:CDS |
| AGAGCTAGACTCTAACGAAA+TGG | 0.468049 | 3.4:-94131827 | MS.gene072998:CDS |
| TTTGGTTCACCTGCCGTCCT+CGG | 0.476541 | 3.4:+94128068 | None:intergenic |
| TGAGGAAGAATCTAATGAAA+CGG | 0.480156 | 3.4:-94130824 | MS.gene072998:CDS |
| GGAGGTGGTCCAAGTGATGT+TGG | 0.482437 | 3.4:+94129933 | None:intergenic |
| TCAAGTCATCCAAACATTCA+AGG | 0.483691 | 3.4:+94130844 | None:intergenic |
| AGAGAAGGAAGAATATCTTC+AGG | 0.484237 | 3.4:+94130771 | None:intergenic |
| GAGACGAGGAGACAAGCTTC+CGG | 0.491196 | 3.4:+94129144 | None:intergenic |
| GTATATAAAGAGACCCGAAA+TGG | 0.496103 | 3.4:-94129214 | MS.gene072998:CDS |
| TATATAAAGAGACCCGAAAT+GGG | 0.502225 | 3.4:-94129213 | MS.gene072998:CDS |
| AGACCCGAAATGGGATGTTA+GGG | 0.502463 | 3.4:-94129204 | MS.gene072998:CDS |
| ATGAAACTCTCTACAAGGCT+TGG | 0.505319 | 3.4:-94131696 | MS.gene072998:CDS |
| CAGTTTGATGCATGAGCGCA+CGG | 0.505741 | 3.4:+94129956 | None:intergenic |
| CTATGCCCATATCACGAACT+AGG | 0.509979 | 3.4:+94127916 | None:intergenic |
| ATCAAACTGCCAACATCACT+TGG | 0.510630 | 3.4:-94129942 | MS.gene072998:CDS |
| CCCTGTACAACCATCTCTCC+AGG | 0.511372 | 3.4:+94128314 | None:intergenic |
| GGAAACTGGACTTATGGATC+AGG | 0.511438 | 3.4:-94127828 | MS.gene072998:intron |
| TGGAAATCCGAAATGGTAAG+TGG | 0.513053 | 3.4:+94131618 | None:intergenic |
| TGCTGAGGGTTCGGATTTGG+TGG | 0.513186 | 3.4:+94131876 | None:intergenic |
| ATAGACGAAATGAAAGAAGA+TGG | 0.513267 | 3.4:-94127147 | MS.gene072998:CDS |
| TAACAAGGGGATGAAATTTG+TGG | 0.514047 | 3.4:-94129732 | MS.gene072998:CDS |
| ATGAAAGAATTATCCACTAC+AGG | 0.515721 | 3.4:-94128103 | MS.gene072998:CDS |
| TTCGTGATATGGGCATAGAT+TGG | 0.517775 | 3.4:-94127911 | MS.gene072998:CDS |
| ATTTCGTTAGAGTCTAGCTC+TGG | 0.518530 | 3.4:+94131829 | None:intergenic |
| CTTAATTTGCTTATTCAACA+TGG | 0.522203 | 3.4:-94130798 | MS.gene072998:CDS |
| CCATAAGCTTTAACTAGAGA+AGG | 0.528104 | 3.4:+94130756 | None:intergenic |
| GGATAATGAAACTCTCTACA+AGG | 0.529318 | 3.4:-94131701 | MS.gene072998:CDS |
| TACCATCTGACGGATCCGCT+GGG | 0.531631 | 3.4:-94130514 | MS.gene072998:CDS |
| TATGTCAAACCGAGGACGGC+AGG | 0.534240 | 3.4:-94128077 | MS.gene072998:intron |
| TGTTTATACTCAATTTCGTA+AGG | 0.534752 | 3.4:-94130390 | MS.gene072998:intron |
| GAAATGAAAGAAGATGGAAC+AGG | 0.535065 | 3.4:-94127141 | MS.gene072998:CDS |
| AAGCAAATAGTTCTACCTAC+TGG | 0.538920 | 3.4:-94128996 | MS.gene072998:intron |
| TTATTTGAATCCTGGAGAGA+TGG | 0.539657 | 3.4:-94128324 | MS.gene072998:CDS |
| AACACCAAGAGGAGTGGTAA+AGG | 0.541108 | 3.4:-94131763 | MS.gene072998:CDS |
| AACAAGGGGATGAAATTTGT+GGG | 0.551545 | 3.4:-94129731 | MS.gene072998:CDS |
| ATGGGCATAGATTGGCGCAT+GGG | 0.552805 | 3.4:-94127903 | MS.gene072998:CDS |
| CAGTTTCCATAATTAGAACA+TGG | 0.556417 | 3.4:+94127843 | None:intergenic |
| AGTCCCAGCAGCTCCAATGA+AGG | 0.560441 | 3.4:+94129885 | None:intergenic |
| GCCCCAGCGGATCCGTCAGA+TGG | 0.561396 | 3.4:+94130512 | None:intergenic |
| TTTGTTCGAGTTGCTATGGA+GGG | 0.563442 | 3.4:-94128630 | MS.gene072998:CDS |
| CAACAAATGTCTTCAACAAG+TGG | 0.563963 | 3.4:-94130540 | MS.gene072998:CDS |
| ATTCTACTAAATTCTCGCCA+TGG | 0.564320 | 3.4:-94129174 | MS.gene072998:CDS |
| CTCTAACGAAATGGAAAGTG+TGG | 0.567651 | 3.4:-94131818 | MS.gene072998:CDS |
| AAGCTTCCGGATGCAAGCCA+TGG | 0.569250 | 3.4:+94129157 | None:intergenic |
| TGACGAATGTATAAATTACC+AGG | 0.571431 | 3.4:+94127247 | None:intergenic |
| TTGAATGTTTGGATGACTTG+AGG | 0.576608 | 3.4:-94130842 | MS.gene072998:CDS |
| TTCATGTTTGCATCTATCAG+AGG | 0.578477 | 3.4:+94128121 | None:intergenic |
| CTCTTGATGTAGGTTAACAA+GGG | 0.580869 | 3.4:-94129746 | MS.gene072998:intron |
| ATCTGACGGATCCGCTGGGG+CGG | 0.582363 | 3.4:-94130510 | MS.gene072998:CDS |
| TTTGAGATTGCTCTTAACTG+TGG | 0.587745 | 3.4:+94127286 | None:intergenic |
| AATAATGGGGACAAGTCACT+TGG | 0.587812 | 3.4:-94127187 | MS.gene072998:CDS |
| ACATGTGTAGGATTTACTAA+AGG | 0.591572 | 3.4:-94129236 | MS.gene072998:intron |
| GTTTGACATAAATCCTGTAG+TGG | 0.595088 | 3.4:+94128090 | None:intergenic |
| TCCAATAACACCAAGAGGAG+TGG | 0.596699 | 3.4:-94131769 | MS.gene072998:CDS |
| ATTGGCGCATGGGAGCAGAA+TGG | 0.597062 | 3.4:-94127893 | MS.gene072998:CDS |
| CAAGGGGATGAAATTTGTGG+GGG | 0.600118 | 3.4:-94129729 | MS.gene072998:CDS |
| GCGAAGAGCTGGATGTTGAA+AGG | 0.601181 | 3.4:-94130568 | MS.gene072998:CDS |
| GCCCATATCACGAACTAGGA+AGG | 0.603994 | 3.4:+94127920 | None:intergenic |
| CCCAAATTACAGTTTGTTTG+GGG | 0.604032 | 3.4:-94130467 | MS.gene072998:CDS |
| CAAGAGGAGTGGTAAAGGTA+CGG | 0.605224 | 3.4:-94131758 | MS.gene072998:CDS |
| AAGTCACTTGGTGCAAGAAG+AGG | 0.607529 | 3.4:-94127175 | MS.gene072998:CDS |
| TCCTCGTCTCATACACGAAG+AGG | 0.611751 | 3.4:-94129131 | MS.gene072998:intron |
| GATTTATGTCAAACCGAGGA+CGG | 0.614401 | 3.4:-94128081 | MS.gene072998:CDS |
| CCTGGAGAGATGGTTGTACA+GGG | 0.618293 | 3.4:-94128314 | MS.gene072998:intron |
| CATTGACGAAGAAGATGCTG+AGG | 0.621299 | 3.4:+94131861 | None:intergenic |
| ACATCCCCAATCCTCAATTG+GGG | 0.626215 | 3.4:+94129911 | None:intergenic |
| TCTTGATGTAGGTTAACAAG+GGG | 0.628429 | 3.4:-94129745 | MS.gene072998:intron |
| GAGAATTTAGTAGAATAATG+AGG | 0.633562 | 3.4:+94129181 | None:intergenic |
| ACCTCTTCGTGTATGAGACG+AGG | 0.647738 | 3.4:+94129130 | None:intergenic |
| TATGGGCATAGATTGGCGCA+TGG | 0.647937 | 3.4:-94127904 | MS.gene072998:CDS |
| AGAAGCTGATGCCGCCCCAG+CGG | 0.648296 | 3.4:+94130499 | None:intergenic |
| AAGGTGAATATGTTGCATAC+TGG | 0.650078 | 3.4:-94127312 | MS.gene072998:CDS |
| AAACAAACTGTAATTTGGGG+TGG | 0.651990 | 3.4:+94130471 | None:intergenic |
| ATCGTCACGGTGGTACATAG+TGG | 0.665558 | 3.4:+94130442 | None:intergenic |
| ACAAGGGGATGAAATTTGTG+GGG | 0.671142 | 3.4:-94129730 | MS.gene072998:CDS |
| ACCATCTGACGGATCCGCTG+GGG | 0.671352 | 3.4:-94130513 | MS.gene072998:CDS |
| TGGCAAACCAAACATTCCAA+AGG | 0.672634 | 3.4:-94131798 | MS.gene072998:CDS |
| GGCAAAACCTACATTCTGTG+AGG | 0.676529 | 3.4:+94129860 | None:intergenic |
| TAAGTGGTTGCAAATAGTCG+AGG | 0.676581 | 3.4:+94131634 | None:intergenic |
| GCACAAACATATGACCCAGA+AGG | 0.677856 | 3.4:-94127331 | MS.gene072998:CDS |
| ACACTTCCAATAACACCAAG+AGG | 0.681084 | 3.4:-94131774 | MS.gene072998:CDS |
| CCCAAACAAACTGTAATTTG+GGG | 0.681742 | 3.4:+94130468 | None:intergenic |
| TTCATATATTCTGCTCAATG+CGG | 0.686672 | 3.4:+94129697 | None:intergenic |
| CATCAAAAGGAAGATCGTCA+CGG | 0.693138 | 3.4:+94130429 | None:intergenic |
| GTAAAGGTACGGCAATCGTG+TGG | 0.694715 | 3.4:-94131747 | MS.gene072998:CDS |
| ATTGACGAAGAAGATGCTGA+GGG | 0.697365 | 3.4:+94131862 | None:intergenic |
| AAGGGGATGAAATTTGTGGG+GGG | 0.704567 | 3.4:-94129728 | MS.gene072998:CDS |
| CAAGTGGTAGTACCATCTGA+CGG | 0.705025 | 3.4:-94130524 | MS.gene072998:CDS |
| CATCCCCAATCCTCAATTGG+GGG | 0.713592 | 3.4:+94129912 | None:intergenic |
| GACTAGTAGACATAATAATG+GGG | 0.715600 | 3.4:-94127200 | MS.gene072998:CDS |
| AGGAAGAATCTAATGAAACG+GGG | 0.715617 | 3.4:-94130822 | MS.gene072998:CDS |
| ACAGGATTTATGTCAAACCG+AGG | 0.734188 | 3.4:-94128085 | MS.gene072998:CDS |
| CAAAAGGAAGATCGTCACGG+TGG | 0.770417 | 3.4:+94130432 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCAGTAAATTTTTAAATT+TGG | - | chr3.4:94131636-94131655 | MS.gene072998:CDS | 10.0% |
| !!! | TTTTCCAATTAAAATAATTA+GGG | - | chr3.4:94127723-94127742 | MS.gene072998:intron | 10.0% |
| !!! | TTTTTCCAATTAAAATAATT+AGG | - | chr3.4:94127722-94127741 | MS.gene072998:intron | 10.0% |
| !! | AAATAAGATAAAATCAAGTA+TGG | + | chr3.4:94128792-94128811 | None:intergenic | 15.0% |
| !! | TAGATTTATATGGATTTATT+TGG | - | chr3.4:94128684-94128703 | MS.gene072998:intron | 15.0% |
| !! | TTCATTGTTTAAAGAATTTA+TGG | + | chr3.4:94131462-94131481 | None:intergenic | 15.0% |
| !! | TTTAACTATATATGTTATGT+TGG | - | chr3.4:94129392-94129411 | MS.gene072998:intron | 15.0% |
| !!! | ATTAAATCTACATTTTCATT+TGG | + | chr3.4:94129470-94129489 | None:intergenic | 15.0% |
| !!! | ATTCAAATAATTTTTTGTCT+TGG | + | chr3.4:94130690-94130709 | None:intergenic | 15.0% |
| !!! | GAATTACTTTAAAGAATTTA+TGG | + | chr3.4:94131351-94131370 | None:intergenic | 15.0% |
| !!! | TTTACCCTAATTATTTTAAT+TGG | + | chr3.4:94127730-94127749 | None:intergenic | 15.0% |
| !! | AACATTTAAATTTACCTAAC+AGG | + | chr3.4:94127644-94127663 | None:intergenic | 20.0% |
| !! | AACTTATTTAAGCTTATCTA+CGG | - | chr3.4:94128710-94128729 | MS.gene072998:intron | 20.0% |
| !! | ACAAAAAATTATTTGAATCC+TGG | - | chr3.4:94130692-94130711 | MS.gene072998:intron | 20.0% |
| !! | ATTATAACAAAAAGGTTCTA+TGG | + | chr3.4:94130593-94130612 | None:intergenic | 20.0% |
| !! | GACATATTAAAAAATCTACA+AGG | + | chr3.4:94131307-94131326 | None:intergenic | 20.0% |
| !! | GCATCAATTATCATAAAATT+TGG | + | chr3.4:94128367-94128386 | None:intergenic | 20.0% |
| !! | TAGACAGTTAAATAATTACA+CGG | - | chr3.4:94130308-94130327 | MS.gene072998:intron | 20.0% |
| !! | TCCTAAATTAACTCATTATT+CGG | + | chr3.4:94129520-94129539 | None:intergenic | 20.0% |
| !! | TTTATTAACAGAAAGAAATG+TGG | + | chr3.4:94131281-94131300 | None:intergenic | 20.0% |
| !!! | TCACAATTTACTTTGAAATA+TGG | - | chr3.4:94131595-94131614 | MS.gene072998:intron | 20.0% |
| !!! | TCTATTTTTGAAATTATTCC+CGG | + | chr3.4:94127510-94127529 | None:intergenic | 20.0% |
| ! | AACAGACAATACTTTATCAA+AGG | + | chr3.4:94129975-94129994 | None:intergenic | 25.0% |
| ! | AATTGTGTGCAACATAAAAT+AGG | - | chr3.4:94129644-94129663 | MS.gene072998:intron | 25.0% |
| ! | AGAAACACATTAATGTACTT+TGG | + | chr3.4:94130977-94130996 | None:intergenic | 25.0% |
| ! | ATAATTAGGGTAAAAATGAG+AGG | - | chr3.4:94127736-94127755 | MS.gene072998:intron | 25.0% |
| ! | ATGATAATTGATGCATCTTT+AGG | - | chr3.4:94128373-94128392 | MS.gene072998:intron | 25.0% |
| ! | CAAGATCTAAAAATATAGTG+TGG | - | chr3.4:94129724-94129743 | MS.gene072998:CDS | 25.0% |
| ! | CATGTGTGTTTAGATTTATA+TGG | - | chr3.4:94128674-94128693 | MS.gene072998:intron | 25.0% |
| ! | CTAGAAATGTTCAGAAAAAT+TGG | - | chr3.4:94130662-94130681 | MS.gene072998:intron | 25.0% |
| ! | GAAATTTAGTGACAAAGAAA+GGG | - | chr3.4:94130205-94130224 | MS.gene072998:intron | 25.0% |
| ! | GAATTAAAGAATGAATAGCT+TGG | + | chr3.4:94130267-94130286 | None:intergenic | 25.0% |
| ! | GAATTAATGTTAGTCATGAT+GGG | - | chr3.4:94129414-94129433 | MS.gene072998:intron | 25.0% |
| ! | GAGAATTTAGTAGAATAATG+AGG | + | chr3.4:94129846-94129865 | None:intergenic | 25.0% |
| ! | GCAACATAAAATAGGAAAAA+GGG | - | chr3.4:94129652-94129671 | MS.gene072998:intron | 25.0% |
| ! | TATGATCCATGTTCTAATTA+TGG | - | chr3.4:94131175-94131194 | MS.gene072998:intron | 25.0% |
| ! | TATGGACAACATAATAATGT+TGG | + | chr3.4:94131333-94131352 | None:intergenic | 25.0% |
| ! | TCCGAATAATGAGTTAATTT+AGG | - | chr3.4:94129516-94129535 | MS.gene072998:intron | 25.0% |
| ! | TGAATATCTTAATTAAGTCC+CGG | + | chr3.4:94129706-94129725 | None:intergenic | 25.0% |
| ! | TGATAATTGATGCATCTTTA+GGG | - | chr3.4:94128374-94128393 | MS.gene072998:intron | 25.0% |
| ! | TGCAACATAAAATAGGAAAA+AGG | - | chr3.4:94129651-94129670 | MS.gene072998:intron | 25.0% |
| ! | TGTTTATACTCAATTTCGTA+AGG | - | chr3.4:94128634-94128653 | MS.gene072998:CDS | 25.0% |
| ! | TTAAGGAAAGAAAAACTAAC+AGG | - | chr3.4:94130234-94130253 | MS.gene072998:intron | 25.0% |
| ! | TTATGGATCAGGTAAATATT+TGG | - | chr3.4:94131207-94131226 | MS.gene072998:intron | 25.0% |
| !! | AATAAGCTAGTTTAGATTGA+TGG | - | chr3.4:94128336-94128355 | MS.gene072998:CDS | 25.0% |
| !! | CAATTTTTCTGAACATTTCT+AGG | + | chr3.4:94130664-94130683 | None:intergenic | 25.0% |
| !! | GCAGAATATATGAATACTTT+TGG | - | chr3.4:94129336-94129355 | MS.gene072998:intron | 25.0% |
| !! | TACATTTTCATTTGGAGATA+AGG | + | chr3.4:94129462-94129481 | None:intergenic | 25.0% |
| !! | TAGATTGAAGGTGTATTATT+TGG | + | chr3.4:94128016-94128035 | None:intergenic | 25.0% |
| !! | TGTAGTCTTTATTTCTTTGT+AGG | - | chr3.4:94130634-94130653 | MS.gene072998:intron | 25.0% |
| !! | TTTTTCATTGTTGAGTTCAA+AGG | + | chr3.4:94129229-94129248 | None:intergenic | 25.0% |
| !!! | AACTTCTTTGTTTGTTTTGT+TGG | - | chr3.4:94128063-94128082 | MS.gene072998:intron | 25.0% |
| !!! | ATATGAATACTTTTGGAAGA+AGG | - | chr3.4:94129343-94129362 | MS.gene072998:intron | 25.0% |
| !!! | CTTAATTTGCTTATTCAACA+TGG | - | chr3.4:94128226-94128245 | MS.gene072998:intron | 25.0% |
| !!! | TTTTAAATTTGGTTCTGATG+TGG | - | chr3.4:94131647-94131666 | MS.gene072998:CDS | 25.0% |
| AAACCCTGTGAAAATAAAGA+CGG | + | chr3.4:94130376-94130395 | None:intergenic | 30.0% | |
| AAAGAAAAAAGGAACTTTCC+TGG | - | chr3.4:94131759-94131778 | MS.gene072998:CDS | 30.0% | |
| AACACACAATCTGTCAAAAA+AGG | + | chr3.4:94131084-94131103 | None:intergenic | 30.0% | |
| AATTATGGAAACTGGACTTA+TGG | - | chr3.4:94131190-94131209 | MS.gene072998:intron | 30.0% | |
| ACAATTTCTCCTTGAATGTT+TGG | - | chr3.4:94128171-94128190 | MS.gene072998:intron | 30.0% | |
| ACACACAATCTGTCAAAAAA+GGG | + | chr3.4:94131083-94131102 | None:intergenic | 30.0% | |
| ACACTAACACATTAGATTGA+AGG | + | chr3.4:94128028-94128047 | None:intergenic | 30.0% | |
| ACATGTGTAGGATTTACTAA+AGG | - | chr3.4:94129788-94129807 | MS.gene072998:intron | 30.0% | |
| ACCTTCATGTTTACTCAAAA+AGG | + | chr3.4:94129557-94129576 | None:intergenic | 30.0% | |
| ACGACTAGTAGACATAATAA+TGG | - | chr3.4:94131822-94131841 | MS.gene072998:CDS | 30.0% | |
| AGGTTTCTATCAGTCAAATA+TGG | - | chr3.4:94130425-94130444 | MS.gene072998:CDS | 30.0% | |
| AGTGAAGAAAAAGTCAATAC+AGG | + | chr3.4:94130861-94130880 | None:intergenic | 30.0% | |
| ATAGACGAAATGAAAGAAGA+TGG | - | chr3.4:94131877-94131896 | MS.gene072998:CDS | 30.0% | |
| ATGAAACAAGAATATACCTC+CGG | + | chr3.4:94127436-94127455 | None:intergenic | 30.0% | |
| ATGAAAGAATTATCCACTAC+AGG | - | chr3.4:94130921-94130940 | MS.gene072998:intron | 30.0% | |
| CAGTTTCCATAATTAGAACA+TGG | + | chr3.4:94131184-94131203 | None:intergenic | 30.0% | |
| CATGTTCTAATTATGGAAAC+TGG | - | chr3.4:94131182-94131201 | MS.gene072998:intron | 30.0% | |
| CCTTCATGTTTACTCAAAAA+GGG | + | chr3.4:94129556-94129575 | None:intergenic | 30.0% | |
| CGAAATTGAGTATAAACATC+TGG | + | chr3.4:94128632-94128651 | None:intergenic | 30.0% | |
| CGAAATTTAGTGACAAAGAA+AGG | - | chr3.4:94130204-94130223 | MS.gene072998:intron | 30.0% | |
| CGACTAGTAGACATAATAAT+GGG | - | chr3.4:94131823-94131842 | MS.gene072998:CDS | 30.0% | |
| CTTCATGTTTACTCAAAAAG+GGG | + | chr3.4:94129555-94129574 | None:intergenic | 30.0% | |
| GAAGAAAAAGTAAGAGAGTA+TGG | + | chr3.4:94131494-94131513 | None:intergenic | 30.0% | |
| GAAGTGACTGAAACTTTATT+CGG | - | chr3.4:94127528-94127547 | MS.gene072998:intron | 30.0% | |
| GACTAGTAGACATAATAATG+GGG | - | chr3.4:94131824-94131843 | MS.gene072998:CDS | 30.0% | |
| GAGCAATCTCAAAAGAAAAA+AGG | - | chr3.4:94131748-94131767 | MS.gene072998:CDS | 30.0% | |
| GATAGACTTATATCAGATAG+CGG | - | chr3.4:94127588-94127607 | MS.gene072998:intron | 30.0% | |
| GATATAAGTCTATCCAGTAT+CGG | + | chr3.4:94127582-94127601 | None:intergenic | 30.0% | |
| GATATCCACAAGTATACTTA+TGG | + | chr3.4:94129188-94129207 | None:intergenic | 30.0% | |
| GGAATTAATGTTAGTCATGA+TGG | - | chr3.4:94129413-94129432 | MS.gene072998:intron | 30.0% | |
| TATATAAAGAGACCCGAAAT+GGG | - | chr3.4:94129811-94129830 | MS.gene072998:intron | 30.0% | |
| TCAAACGAAAATATGTTCAC+CGG | - | chr3.4:94129675-94129694 | MS.gene072998:intron | 30.0% | |
| TCGCTAAAAGAAAAAACTAC+AGG | + | chr3.4:94130831-94130850 | None:intergenic | 30.0% | |
| TCTACAGTATAGTAATTGCT+AGG | - | chr3.4:94130994-94131013 | MS.gene072998:intron | 30.0% | |
| TGACGAATGTATAAATTACC+AGG | + | chr3.4:94131780-94131799 | None:intergenic | 30.0% | |
| TGAGGAAGAATCTAATGAAA+CGG | - | chr3.4:94128200-94128219 | MS.gene072998:intron | 30.0% | |
| TTCAAGAGTTATCACTGATA+GGG | - | chr3.4:94129576-94129595 | MS.gene072998:intron | 30.0% | |
| TTCATATATTCTGCTCAATG+CGG | + | chr3.4:94129330-94129349 | None:intergenic | 30.0% | |
| ! | AACTGTTTTCACATAAGCTA+TGG | + | chr3.4:94128849-94128868 | None:intergenic | 30.0% |
| ! | AAGTATTGTCTGTTCATCAT+AGG | - | chr3.4:94129981-94130000 | MS.gene072998:intron | 30.0% |
| ! | AGTCTTTATTTCTTTGTAGG+TGG | - | chr3.4:94130637-94130656 | MS.gene072998:intron | 30.0% |
| ! | TCATAGACACTTACTTGTTT+TGG | + | chr3.4:94131569-94131588 | None:intergenic | 30.0% |
| ! | TTTTGCCATAAGTATACTTG+TGG | - | chr3.4:94129180-94129199 | MS.gene072998:CDS | 30.0% |
| !! | AAACTTCTGCTGGTTTAATA+TGG | - | chr3.4:94130523-94130542 | MS.gene072998:CDS | 30.0% |
| !! | ACCATTATATACTTGTTGTC+AGG | - | chr3.4:94131671-94131690 | MS.gene072998:CDS | 30.0% |
| !! | ACTTTTTCTTCTTCTGAATC+AGG | - | chr3.4:94131503-94131522 | MS.gene072998:intron | 30.0% |
| !! | GGAAATTCACTTTTCCATAT+AGG | - | chr3.4:94130446-94130465 | MS.gene072998:CDS | 30.0% |
| !! | GTTTTGGTATGCTGAAATAT+CGG | + | chr3.4:94131553-94131572 | None:intergenic | 30.0% |
| !! | TCACTTTTCCATATAGGTAT+GGG | - | chr3.4:94130452-94130471 | MS.gene072998:CDS | 30.0% |
| !! | TTCACTTTTCCATATAGGTA+TGG | - | chr3.4:94130451-94130470 | MS.gene072998:CDS | 30.0% |
| !!! | AATCCGTCTTTATTTTCACA+GGG | - | chr3.4:94130370-94130389 | MS.gene072998:intron | 30.0% |
| AAACAAACTGTAATTTGGGG+TGG | + | chr3.4:94128556-94128575 | None:intergenic | 35.0% | |
| AAACTTGTACACTAAGCTAG+CGG | - | chr3.4:94127894-94127913 | MS.gene072998:CDS | 35.0% | |
| AACAAGGGGATGAAATTTGT+GGG | - | chr3.4:94129293-94129312 | MS.gene072998:intron | 35.0% | |
| AAGGGTAATCTTTCATGTTC+CGG | + | chr3.4:94131065-94131084 | None:intergenic | 35.0% | |
| AAGGTGAATATGTTGCATAC+TGG | - | chr3.4:94131712-94131731 | MS.gene072998:CDS | 35.0% | |
| AATGCGTTACAAGAAGATGT+AGG | + | chr3.4:94130341-94130360 | None:intergenic | 35.0% | |
| AATGCTTTATGCTCGTAGAA+AGG | - | chr3.4:94127840-94127859 | MS.gene072998:CDS | 35.0% | |
| ACAAATGTTACATTCAGGCT+CGG | + | chr3.4:94127935-94127954 | None:intergenic | 35.0% | |
| AGAGAAGGAAGAATATCTTC+AGG | + | chr3.4:94128256-94128275 | None:intergenic | 35.0% | |
| AGGAAGAATCTAATGAAACG+GGG | - | chr3.4:94128202-94128221 | MS.gene072998:intron | 35.0% | |
| ATACTCAATTTCGTAAGGCA+TGG | - | chr3.4:94128639-94128658 | MS.gene072998:intron | 35.0% | |
| ATGCAACATATTCACCTTCT+GGG | + | chr3.4:94131710-94131729 | None:intergenic | 35.0% | |
| ATTCTACTAAATTCTCGCCA+TGG | - | chr3.4:94129850-94129869 | MS.gene072998:intron | 35.0% | |
| CAAAGAAAGGGTAATGCTTA+AGG | - | chr3.4:94130217-94130236 | MS.gene072998:intron | 35.0% | |
| CAACAAATGTCTTCAACAAG+TGG | - | chr3.4:94128484-94128503 | MS.gene072998:intron | 35.0% | |
| CATTTCGGATTTCCAAAAAC+CGG | - | chr3.4:94127414-94127433 | MS.gene072998:intron | 35.0% | |
| CCCAAACAAACTGTAATTTG+GGG | + | chr3.4:94128559-94128578 | None:intergenic | 35.0% | |
| CCCCAAACAAACTGTAATTT+GGG | + | chr3.4:94128560-94128579 | None:intergenic | 35.0% | |
| CCTTCTCTAGTTAAAGCTTA+TGG | - | chr3.4:94128268-94128287 | MS.gene072998:intron | 35.0% | |
| CGAGGATCAATACAATAAAC+AGG | + | chr3.4:94127375-94127394 | None:intergenic | 35.0% | |
| CTATACAACTGCATACAGAA+TGG | - | chr3.4:94129608-94129627 | MS.gene072998:intron | 35.0% | |
| CTCTTGATGTAGGTTAACAA+GGG | - | chr3.4:94129278-94129297 | MS.gene072998:intron | 35.0% | |
| GAAATGAAAGAAGATGGAAC+AGG | - | chr3.4:94131883-94131902 | MS.gene072998:CDS | 35.0% | |
| GAGGAAGAATCTAATGAAAC+GGG | - | chr3.4:94128201-94128220 | MS.gene072998:intron | 35.0% | |
| GCAAAAGCCATTTCCTATTT+CGG | + | chr3.4:94129000-94129019 | None:intergenic | 35.0% | |
| GCCTGACAACAAGTATATAA+TGG | + | chr3.4:94131675-94131694 | None:intergenic | 35.0% | |
| GCGATCAAAGTAAAGCTATT+TGG | + | chr3.4:94127872-94127891 | None:intergenic | 35.0% | |
| GCTTTAACTCCATCTAGAAA+AGG | - | chr3.4:94130175-94130194 | MS.gene072998:intron | 35.0% | |
| GGATAATGAAACTCTCTACA+AGG | - | chr3.4:94127323-94127342 | MS.gene072998:CDS | 35.0% | |
| GTATATAAAGAGACCCGAAA+TGG | - | chr3.4:94129810-94129829 | MS.gene072998:intron | 35.0% | |
| GTTCAAGAGTTATCACTGAT+AGG | - | chr3.4:94129575-94129594 | MS.gene072998:intron | 35.0% | |
| GTTTGACATAAATCCTGTAG+TGG | + | chr3.4:94130937-94130956 | None:intergenic | 35.0% | |
| TAACAAGGGGATGAAATTTG+TGG | - | chr3.4:94129292-94129311 | MS.gene072998:intron | 35.0% | |
| TATGCAACATATTCACCTTC+TGG | + | chr3.4:94131711-94131730 | None:intergenic | 35.0% | |
| TCAAGTCATCCAAACATTCA+AGG | + | chr3.4:94128183-94128202 | None:intergenic | 35.0% | |
| TCTTAAGCTTGTACATGTGT+AGG | - | chr3.4:94129776-94129795 | MS.gene072998:intron | 35.0% | |
| TCTTGATGTAGGTTAACAAG+GGG | - | chr3.4:94129279-94129298 | MS.gene072998:intron | 35.0% | |
| TTATTTGAATCCTGGAGAGA+TGG | - | chr3.4:94130700-94130719 | MS.gene072998:intron | 35.0% | |
| TTCATGTTTGCATCTATCAG+AGG | + | chr3.4:94130906-94130925 | None:intergenic | 35.0% | |
| TTGAACAACCCATACCTATA+TGG | + | chr3.4:94130463-94130482 | None:intergenic | 35.0% | |
| TTGAATGTTTGGATGACTTG+AGG | - | chr3.4:94128182-94128201 | MS.gene072998:intron | 35.0% | |
| TTGGTGAATGTGAAATTGTC+AGG | - | chr3.4:94128409-94128428 | MS.gene072998:intron | 35.0% | |
| TTTCATGTTCCGGTTACAAA+AGG | + | chr3.4:94131055-94131074 | None:intergenic | 35.0% | |
| TTTGCAACCACTTACCATTT+CGG | - | chr3.4:94127399-94127418 | MS.gene072998:intron | 35.0% | |
| ! | AAGAATATACCTCCGGTTTT+TGG | + | chr3.4:94127429-94127448 | None:intergenic | 35.0% |
| ! | AAGCAAATAGTTCTACCTAC+TGG | - | chr3.4:94130028-94130047 | MS.gene072998:intron | 35.0% |
| ! | ACCCCAAATTACAGTTTGTT+TGG | - | chr3.4:94128555-94128574 | MS.gene072998:intron | 35.0% |
| ! | ATTTCAAGTGTTAGCCTGTT+AGG | - | chr3.4:94127627-94127646 | MS.gene072998:intron | 35.0% |
| ! | CCATAAGCTTTAACTAGAGA+AGG | + | chr3.4:94128271-94128290 | None:intergenic | 35.0% |
| ! | CCCAAATTACAGTTTGTTTG+GGG | - | chr3.4:94128557-94128576 | MS.gene072998:intron | 35.0% |
| ! | CCCCAAATTACAGTTTGTTT+GGG | - | chr3.4:94128556-94128575 | MS.gene072998:intron | 35.0% |
| ! | TAGAAACGATCTCAGAGTTT+TGG | - | chr3.4:94127302-94127321 | MS.gene072998:CDS | 35.0% |
| ! | TCATGGATTAAAACTTCTGC+TGG | - | chr3.4:94130513-94130532 | MS.gene072998:CDS | 35.0% |
| ! | TGTTATTGGAAGTGTACCTT+TGG | + | chr3.4:94127245-94127264 | None:intergenic | 35.0% |
| ! | TTTGAGATTGCTCTTAACTG+TGG | + | chr3.4:94131741-94131760 | None:intergenic | 35.0% |
| !! | AAGTGTACCTTTGGAATGTT+TGG | + | chr3.4:94127236-94127255 | None:intergenic | 35.0% |
| !! | AATTGATGCATCTTTAGGGT+TGG | - | chr3.4:94128378-94128397 | MS.gene072998:intron | 35.0% |
| !! | ATGGTTTGAGACATGTCTTT+TGG | - | chr3.4:94131150-94131169 | MS.gene072998:intron | 35.0% |
| !! | CTTGTTTTCATAAGCTATCC+TGG | + | chr3.4:94128826-94128845 | None:intergenic | 35.0% |
| !!! | CCCTTTTTGAGTAAACATGA+AGG | - | chr3.4:94129553-94129572 | MS.gene072998:intron | 35.0% |
| !!! | GAATCCGTCTTTATTTTCAC+AGG | - | chr3.4:94130369-94130388 | MS.gene072998:intron | 35.0% |
| !!! | TTTTGAAATTATTCCCGGTG+TGG | + | chr3.4:94127505-94127524 | None:intergenic | 35.0% |
| AAAGCCATTTCCTATTTCGG+TGG | + | chr3.4:94128997-94129016 | None:intergenic | 40.0% | |
| AACGAAAATATGTTCACCGG+TGG | - | chr3.4:94129678-94129697 | MS.gene072998:intron | 40.0% | |
| ACAACTGCATACAGAATGGA+AGG | - | chr3.4:94129612-94129631 | MS.gene072998:intron | 40.0% | |
| ACAAGGGGATGAAATTTGTG+GGG | - | chr3.4:94129294-94129313 | MS.gene072998:intron | 40.0% | |
| ACACTTCCAATAACACCAAG+AGG | - | chr3.4:94127250-94127269 | MS.gene072998:CDS | 40.0% | |
| ACAGGATTTATGTCAAACCG+AGG | - | chr3.4:94130939-94130958 | MS.gene072998:intron | 40.0% | |
| ACGCATAAGTTAACCGATAC+TGG | - | chr3.4:94127566-94127585 | MS.gene072998:intron | 40.0% | |
| AGAGCTAGACTCTAACGAAA+TGG | - | chr3.4:94127197-94127216 | MS.gene072998:CDS | 40.0% | |
| AGTTAAAACACTGCTCGAAG+TGG | - | chr3.4:94127786-94127805 | MS.gene072998:intron | 40.0% | |
| ATCAAACTGCCAACATCACT+TGG | - | chr3.4:94129082-94129101 | MS.gene072998:intron | 40.0% | |
| ATCTATCAGAGGATACCTGA+AGG | + | chr3.4:94130895-94130914 | None:intergenic | 40.0% | |
| ATGAAACTCTCTACAAGGCT+TGG | - | chr3.4:94127328-94127347 | MS.gene072998:CDS | 40.0% | |
| ATTGACGAAGAAGATGCTGA+GGG | + | chr3.4:94127165-94127184 | None:intergenic | 40.0% | |
| CAAATTGTGCGTCTCAAGTT+TGG | - | chr3.4:94131798-94131817 | MS.gene072998:CDS | 40.0% | |
| CAACTGCATACAGAATGGAA+GGG | - | chr3.4:94129613-94129632 | MS.gene072998:intron | 40.0% | |
| CACTGTGTATATACACCTTC+AGG | - | chr3.4:94130877-94130896 | MS.gene072998:intron | 40.0% | |
| CATCAAAAGGAAGATCGTCA+CGG | + | chr3.4:94128598-94128617 | None:intergenic | 40.0% | |
| CCTCTTGATGTAGGTTAACA+AGG | - | chr3.4:94129277-94129296 | MS.gene072998:intron | 40.0% | |
| CCTTGTTAACCTACATCAAG+AGG | + | chr3.4:94129280-94129299 | None:intergenic | 40.0% | |
| CGCTGACAAATGTTACATTC+AGG | + | chr3.4:94127940-94127959 | None:intergenic | 40.0% | |
| CTCTAACGAAATGGAAAGTG+TGG | - | chr3.4:94127206-94127225 | MS.gene072998:CDS | 40.0% | |
| CTGAAATATCGGTCTTCTCT+AGG | + | chr3.4:94131542-94131561 | None:intergenic | 40.0% | |
| CTTATTTCCATAAGCTCTCC+AGG | - | chr3.4:94128805-94128824 | MS.gene072998:intron | 40.0% | |
| GATTTATGTCAAACCGAGGA+CGG | - | chr3.4:94130943-94130962 | MS.gene072998:intron | 40.0% | |
| GCACAAGGTCATGTTCATAA+AGG | + | chr3.4:94128139-94128158 | None:intergenic | 40.0% | |
| GCCCCAAACAAACTGTAATT+TGG | + | chr3.4:94128561-94128580 | None:intergenic | 40.0% | |
| GGCAAACAAGTGACATCAAA+AGG | + | chr3.4:94128611-94128630 | None:intergenic | 40.0% | |
| TAAGTGGTTGCAAATAGTCG+AGG | + | chr3.4:94127393-94127412 | None:intergenic | 40.0% | |
| TCAAGTATGGACGTCTTACA+AGG | + | chr3.4:94128779-94128798 | None:intergenic | 40.0% | |
| TCCTTCCTAGTTCGTGATAT+GGG | - | chr3.4:94131103-94131122 | MS.gene072998:intron | 40.0% | |
| TCTTCTTCTGAATCAGGAGT+CGG | - | chr3.4:94131509-94131528 | MS.gene072998:intron | 40.0% | |
| TGCTATGGAGGGATTACTTT+AGG | - | chr3.4:94130405-94130424 | MS.gene072998:CDS | 40.0% | |
| TGGAAATCCGAAATGGTAAG+TGG | + | chr3.4:94127409-94127428 | None:intergenic | 40.0% | |
| TGGCAAACCAAACATTCCAA+AGG | - | chr3.4:94127226-94127245 | MS.gene072998:CDS | 40.0% | |
| TGTTTGCTTCCTCTTGATGT+AGG | - | chr3.4:94129268-94129287 | MS.gene072998:intron | 40.0% | |
| TTCAAAGTCTTTGATGCCTC+TGG | - | chr3.4:94130478-94130497 | MS.gene072998:CDS | 40.0% | |
| TTCCTTCCTAGTTCGTGATA+TGG | - | chr3.4:94131102-94131121 | MS.gene072998:intron | 40.0% | |
| TTGTCCACCGAAATAGGAAA+TGG | - | chr3.4:94128990-94129009 | MS.gene072998:intron | 40.0% | |
| ! | AATAATGGGGACAAGTCACT+TGG | - | chr3.4:94131837-94131856 | MS.gene072998:CDS | 40.0% |
| ! | ATGTTAGTCATGATGGGAGT+AGG | - | chr3.4:94129420-94129439 | MS.gene072998:intron | 40.0% |
| ! | ATTTCGTTAGAGTCTAGCTC+TGG | + | chr3.4:94127198-94127217 | None:intergenic | 40.0% |
| ! | GAAAACGAAGTGTTACCAGT+AGG | + | chr3.4:94130046-94130065 | None:intergenic | 40.0% |
| ! | GTTAAGTTGTCCACCGAAAT+AGG | - | chr3.4:94128984-94129003 | MS.gene072998:intron | 40.0% |
| ! | TGTTAGTCATGATGGGAGTA+GGG | - | chr3.4:94129421-94129440 | MS.gene072998:intron | 40.0% |
| ! | TTGCACACACCTTTTGTAAC+CGG | - | chr3.4:94131043-94131062 | MS.gene072998:intron | 40.0% |
| !! | CGGTTTTTGGAAATCCGAAA+TGG | + | chr3.4:94127416-94127435 | None:intergenic | 40.0% |
| !! | CTTCTGCTGGTTTAATATGG+CGG | - | chr3.4:94130526-94130545 | MS.gene072998:CDS | 40.0% |
| !! | TACTTTTGGAAGAAGGTCAG+AGG | - | chr3.4:94129350-94129369 | MS.gene072998:intron | 40.0% |
| !! | TTTAGGGTTGGTTGGTTCAT+TGG | - | chr3.4:94128390-94128409 | MS.gene072998:intron | 40.0% |
| !! | TTTGTTCGAGTTGCTATGGA+GGG | - | chr3.4:94130394-94130413 | MS.gene072998:CDS | 40.0% |
| !!! | TTTTGTTCGAGTTGCTATGG+AGG | - | chr3.4:94130393-94130412 | MS.gene072998:CDS | 40.0% |
| AACACCAAGAGGAGTGGTAA+AGG | - | chr3.4:94127261-94127280 | MS.gene072998:CDS | 45.0% | |
| AAGCTATCCTGGAGAGCTTA+TGG | + | chr3.4:94128815-94128834 | None:intergenic | 45.0% | |
| AAGGACTAGAGTCTCTTGCA+TGG | + | chr3.4:94129210-94129229 | None:intergenic | 45.0% | |
| AAGGGGATGAAATTTGTGGG+GGG | - | chr3.4:94129296-94129315 | MS.gene072998:intron | 45.0% | |
| ACATCCCCAATCCTCAATTG+GGG | + | chr3.4:94129116-94129135 | None:intergenic | 45.0% | |
| AGAAACTTGTAGCGAAGAGC+TGG | - | chr3.4:94128445-94128464 | MS.gene072998:intron | 45.0% | |
| AGACATCCCCAATCCTCAAT+TGG | + | chr3.4:94129118-94129137 | None:intergenic | 45.0% | |
| AGACCCGAAATGGGATGTTA+GGG | - | chr3.4:94129820-94129839 | MS.gene072998:intron | 45.0% | |
| CAAGAGGAGTGGTAAAGGTA+CGG | - | chr3.4:94127266-94127285 | MS.gene072998:CDS | 45.0% | |
| CAAGGGGATGAAATTTGTGG+GGG | - | chr3.4:94129295-94129314 | MS.gene072998:intron | 45.0% | |
| CAAGTGGTAGTACCATCTGA+CGG | - | chr3.4:94128500-94128519 | MS.gene072998:intron | 45.0% | |
| CATTGACGAAGAAGATGCTG+AGG | + | chr3.4:94127166-94127185 | None:intergenic | 45.0% | |
| CTATGCCCATATCACGAACT+AGG | + | chr3.4:94131111-94131130 | None:intergenic | 45.0% | |
| CTTCTTCTGAATCAGGAGTC+GGG | - | chr3.4:94131510-94131529 | MS.gene072998:intron | 45.0% | |
| GACATCCCCAATCCTCAATT+GGG | + | chr3.4:94129117-94129136 | None:intergenic | 45.0% | |
| GCACAAACATATGACCCAGA+AGG | - | chr3.4:94131693-94131712 | MS.gene072998:CDS | 45.0% | |
| GGAAACTGGACTTATGGATC+AGG | - | chr3.4:94131196-94131215 | MS.gene072998:intron | 45.0% | |
| GGACTTTCCTCACAGAATGT+AGG | - | chr3.4:94129157-94129176 | MS.gene072998:CDS | 45.0% | |
| GGCAAAACCTACATTCTGTG+AGG | + | chr3.4:94129167-94129186 | None:intergenic | 45.0% | |
| TCCAATAACACCAAGAGGAG+TGG | - | chr3.4:94127255-94127274 | MS.gene072998:CDS | 45.0% | |
| TGAAACTGAGATGTCCACAC+CGG | - | chr3.4:94127488-94127507 | MS.gene072998:CDS | 45.0% | |
| TGATGCCTCTGGCGATTTAT+CGG | - | chr3.4:94130489-94130508 | MS.gene072998:CDS | 45.0% | |
| TGTGTTCTCAATGCTGCACA+AGG | + | chr3.4:94128154-94128173 | None:intergenic | 45.0% | |
| TTCGGATTTCCAAAAACCGG+AGG | - | chr3.4:94127417-94127436 | MS.gene072998:intron | 45.0% | |
| TTGGGGATGTCTTCCTTCAT+TGG | - | chr3.4:94129126-94129145 | MS.gene072998:intron | 45.0% | |
| !! | AAGTCACTTGGTGCAAGAAG+AGG | - | chr3.4:94131849-94131868 | MS.gene072998:CDS | 45.0% |
| !! | ACCACTCCTCTTGGTGTTAT+TGG | + | chr3.4:94127259-94127278 | None:intergenic | 45.0% |
| !! | GATGCATCTTTAGGGTTGGT+TGG | - | chr3.4:94128382-94128401 | MS.gene072998:intron | 45.0% |
| !! | GGCGGTGTTATTCATAGTTG+TGG | - | chr3.4:94130544-94130563 | MS.gene072998:CDS | 45.0% |
| !!! | GGGTTTTGTTCGAGTTGCTA+TGG | - | chr3.4:94130390-94130409 | MS.gene072998:intron | 45.0% |
| !!! | TCGCACTAGCCTTTTCTAGA+TGG | + | chr3.4:94130187-94130206 | None:intergenic | 45.0% |
| !! | ATAAATTAATTATAACAAAA+AGG | + | chr3.4:94130601-94130620 | None:intergenic | 5.0% |
| AATATGTTCACCGGTGGCTC+CGG | - | chr3.4:94129684-94129703 | MS.gene072998:CDS | 50.0% | |
| ACCTCCCCCAATTGAGGATT+GGG | - | chr3.4:94129108-94129127 | MS.gene072998:intron | 50.0% | |
| ACCTCTTCGTGTATGAGACG+AGG | + | chr3.4:94129897-94129916 | None:intergenic | 50.0% | |
| AGATGCTGAGGGTTCGGATT+TGG | + | chr3.4:94127154-94127173 | None:intergenic | 50.0% | |
| AGGCCCTAACATCCCATTTC+GGG | + | chr3.4:94129826-94129845 | None:intergenic | 50.0% | |
| ATCGTCACGGTGGTACATAG+TGG | + | chr3.4:94128585-94128604 | None:intergenic | 50.0% | |
| ATGACCCGATAAATCGCCAG+AGG | + | chr3.4:94130497-94130516 | None:intergenic | 50.0% | |
| CAAAAGGAAGATCGTCACGG+TGG | + | chr3.4:94128595-94128614 | None:intergenic | 50.0% | |
| CAGTTTGATGCATGAGCGCA+CGG | + | chr3.4:94129071-94129090 | None:intergenic | 50.0% | |
| CATCCCCAATCCTCAATTGG+GGG | + | chr3.4:94129115-94129134 | None:intergenic | 50.0% | |
| CCTGGAGAGATGGTTGTACA+GGG | - | chr3.4:94130710-94130729 | MS.gene072998:intron | 50.0% | |
| CGAAGAAGATGCTGAGGGTT+CGG | + | chr3.4:94127160-94127179 | None:intergenic | 50.0% | |
| CGTACCTTTACCACTCCTCT+TGG | + | chr3.4:94127268-94127287 | None:intergenic | 50.0% | |
| CTTCCTTCATTGGAGCTGCT+GGG | - | chr3.4:94129136-94129155 | MS.gene072998:CDS | 50.0% | |
| GAAACTGAGATGTCCACACC+GGG | - | chr3.4:94127489-94127508 | MS.gene072998:CDS | 50.0% | |
| GAGACCCGAAATGGGATGTT+AGG | - | chr3.4:94129819-94129838 | MS.gene072998:intron | 50.0% | |
| GAGGCCCTAACATCCCATTT+CGG | + | chr3.4:94129827-94129846 | None:intergenic | 50.0% | |
| GATGCCTCTGGCGATTTATC+GGG | - | chr3.4:94130490-94130509 | MS.gene072998:CDS | 50.0% | |
| GCCCATATCACGAACTAGGA+AGG | + | chr3.4:94131107-94131126 | None:intergenic | 50.0% | |
| GCGAAGAGCTGGATGTTGAA+AGG | - | chr3.4:94128456-94128475 | MS.gene072998:intron | 50.0% | |
| TAATTAAGTCCCGGAGCCAC+CGG | + | chr3.4:94129697-94129716 | None:intergenic | 50.0% | |
| TCCTCGTCTCATACACGAAG+AGG | - | chr3.4:94129893-94129912 | MS.gene072998:CDS | 50.0% | |
| TCCTGGAGAGATGGTTGTAC+AGG | - | chr3.4:94130709-94130728 | MS.gene072998:intron | 50.0% | |
| TCTGGCGATTTATCGGGTCA+TGG | - | chr3.4:94130496-94130515 | MS.gene072998:CDS | 50.0% | |
| TCTTCCTTCATTGGAGCTGC+TGG | - | chr3.4:94129135-94129154 | MS.gene072998:CDS | 50.0% | |
| ! | AGTCATGATGGGAGTAGGGA+TGG | - | chr3.4:94129425-94129444 | MS.gene072998:intron | 50.0% |
| ! | CATTCAGGCTCGGTTTAGCA+AGG | + | chr3.4:94127925-94127944 | None:intergenic | 50.0% |
| ! | GTAAAGGTACGGCAATCGTG+TGG | - | chr3.4:94127277-94127296 | MS.gene072998:CDS | 50.0% |
| AAGCTTCCGGATGCAAGCCA+TGG | + | chr3.4:94129870-94129889 | None:intergenic | 55.0% | |
| AGTCCCAGCAGCTCCAATGA+AGG | + | chr3.4:94129142-94129161 | None:intergenic | 55.0% | |
| ATATGTTCACCGGTGGCTCC+GGG | - | chr3.4:94129685-94129704 | MS.gene072998:CDS | 55.0% | |
| CAATCCTCAATTGGGGGAGG+TGG | + | chr3.4:94129109-94129128 | None:intergenic | 55.0% | |
| CACCTCCCCCAATTGAGGAT+TGG | - | chr3.4:94129107-94129126 | MS.gene072998:intron | 55.0% | |
| CCCTGTACAACCATCTCTCC+AGG | + | chr3.4:94130713-94130732 | None:intergenic | 55.0% | |
| CCTCCCCCAATTGAGGATTG+GGG | - | chr3.4:94129109-94129128 | MS.gene072998:intron | 55.0% | |
| GAGACGAGGAGACAAGCTTC+CGG | + | chr3.4:94129883-94129902 | None:intergenic | 55.0% | |
| GGAGGTGGTCCAAGTGATGT+TGG | + | chr3.4:94129094-94129113 | None:intergenic | 55.0% | |
| TATGTCAAACCGAGGACGGC+AGG | - | chr3.4:94130947-94130966 | MS.gene072998:intron | 55.0% | |
| TGCTGAGGGTTCGGATTTGG+TGG | + | chr3.4:94127151-94127170 | None:intergenic | 55.0% | |
| ! | TACCATCTGACGGATCCGCT+GGG | - | chr3.4:94128510-94128529 | MS.gene072998:intron | 55.0% |
| ! | TTCTCGCCATGGCTTGCATC+CGG | - | chr3.4:94129861-94129880 | MS.gene072998:intron | 55.0% |
| ! | TTTGGTTCACCTGCCGTCCT+CGG | + | chr3.4:94130959-94130978 | None:intergenic | 55.0% |
| CCCCAATCCTCAATTGGGGG+AGG | + | chr3.4:94129112-94129131 | None:intergenic | 60.0% | |
| TGGACCACCTCCCCCAATTG+AGG | - | chr3.4:94129102-94129121 | MS.gene072998:intron | 60.0% | |
| ! | ACCATCTGACGGATCCGCTG+GGG | - | chr3.4:94128511-94128530 | MS.gene072998:intron | 60.0% |
| ! | GTACCATCTGACGGATCCGC+TGG | - | chr3.4:94128509-94128528 | MS.gene072998:intron | 60.0% |
| AGAAGCTGATGCCGCCCCAG+CGG | + | chr3.4:94128528-94128547 | None:intergenic | 65.0% | |
| ! | ATCTGACGGATCCGCTGGGG+CGG | - | chr3.4:94128514-94128533 | MS.gene072998:intron | 65.0% |
| GCCCCAGCGGATCCGTCAGA+TGG | + | chr3.4:94128515-94128534 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 94127135 | 94131911 | 94127135 | ID=MS.gene072998 |
| chr3.4 | mRNA | 94127135 | 94131911 | 94127135 | ID=MS.gene072998.t1;Parent=MS.gene072998 |
| chr3.4 | exon | 94131608 | 94131911 | 94131608 | ID=MS.gene072998.t1.exon1;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94131608 | 94131911 | 94131608 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94130746 | 94130885 | 94130746 | ID=MS.gene072998.t1.exon2;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94130746 | 94130885 | 94130746 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94130391 | 94130615 | 94130391 | ID=MS.gene072998.t1.exon3;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94130391 | 94130615 | 94130391 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94129872 | 94129997 | 94129872 | ID=MS.gene072998.t1.exon4;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94129872 | 94129997 | 94129872 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94129682 | 94129756 | 94129682 | ID=MS.gene072998.t1.exon5;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94129682 | 94129756 | 94129682 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94129132 | 94129248 | 94129132 | ID=MS.gene072998.t1.exon6;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94129132 | 94129248 | 94129132 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94128997 | 94129043 | 94128997 | ID=MS.gene072998.t1.exon7;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94128997 | 94129043 | 94128997 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94128579 | 94128655 | 94128579 | ID=MS.gene072998.t1.exon8;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94128579 | 94128655 | 94128579 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94128315 | 94128390 | 94128315 | ID=MS.gene072998.t1.exon9;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94128315 | 94128390 | 94128315 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94128078 | 94128147 | 94128078 | ID=MS.gene072998.t1.exon10;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94128078 | 94128147 | 94128078 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94127829 | 94127952 | 94127829 | ID=MS.gene072998.t1.exon11;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94127829 | 94127952 | 94127829 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94127472 | 94127521 | 94127472 | ID=MS.gene072998.t1.exon12;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94127472 | 94127521 | 94127472 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| chr3.4 | exon | 94127135 | 94127353 | 94127135 | ID=MS.gene072998.t1.exon13;Parent=MS.gene072998.t1 |
| chr3.4 | CDS | 94127135 | 94127353 | 94127135 | ID=cds.MS.gene072998.t1;Parent=MS.gene072998.t1 |
| Gene Sequence |
| Protein sequence |
