AlfalfaGEDB | MS.gene073674

M. sativa cultivar XinJiangDaYe / MS.gene073674

KEGG: K03094
GO: GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0051603 GO:0071704 GO:1901564 GO:1901575
PFAM: PF01466.22 PF03931.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073674.t1	XP_003612227.1	98.7	154	2	0	3	156	2	155	1.40E-77	298.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073674.t1	Q39255	78.0	159	29	1	4	156	2	160	6.1e-66	251.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073674.t1	Q155U2	98.7	154	2	0	3	156	2	155	9.9e-78	298.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049129	MS.gene073674	-0.868812	4.94E-66	-1.69E-46
MS.gene049255	MS.gene073674	0.835589	1.54E-56	-1.69E-46
MS.gene049283	MS.gene073674	0.804991	1.66E-49	-1.69E-46
MS.gene049411	MS.gene073674	0.824017	1.01E-53	-1.69E-46
MS.gene049653	MS.gene073674	0.829961	3.84E-55	-1.69E-46
MS.gene049680	MS.gene073674	0.813292	2.76E-51	-1.69E-46
MS.gene049951	MS.gene073674	0.815619	8.43E-52	-1.69E-46
MS.gene050085	MS.gene073674	0.817385	3.39E-52	-1.69E-46
MS.gene050277	MS.gene073674	0.812425	4.27E-51	-1.69E-46
MS.gene050384	MS.gene073674	0.820729	5.88E-53	-1.69E-46
MS.gene050386	MS.gene073674	0.819838	9.41E-53	-1.69E-46
MS.gene050437	MS.gene073674	0.856835	2.46E-62	-1.69E-46
MS.gene050689	MS.gene073674	0.845535	3.82E-59	-1.69E-46
MS.gene050752	MS.gene073674	0.880141	7.01E-70	-1.69E-46
MS.gene050838	MS.gene073674	0.806983	6.31E-50	-1.69E-46
MS.gene050945	MS.gene073674	0.844141	9.08E-59	-1.69E-46
MS.gene050955	MS.gene073674	0.873538	1.36E-67	-1.69E-46
MS.gene051003	MS.gene073674	0.865576	5.34E-65	-1.69E-46
MS.gene051234	MS.gene073674	0.836817	7.49E-57	-1.69E-46
MS.gene051241	MS.gene073674	0.817888	2.61E-52	-1.69E-46
MS.gene051328	MS.gene073674	0.802031	6.80E-49	-1.69E-46
MS.gene051343	MS.gene073674	0.900799	5.10E-78	-1.69E-46
MS.gene05134	MS.gene073674	0.845248	4.57E-59	-1.69E-46
MS.gene051363	MS.gene073674	0.807023	6.19E-50	-1.69E-46
MS.gene051597	MS.gene073674	0.839543	1.49E-57	-1.69E-46
MS.gene05188	MS.gene073674	0.839299	1.72E-57	-1.69E-46
MS.gene051902	MS.gene073674	0.834543	2.82E-56	-1.69E-46
MS.gene051903	MS.gene073674	0.805984	1.03E-49	-1.69E-46
MS.gene051975	MS.gene073674	0.864063	1.59E-64	-1.69E-46
MS.gene052072	MS.gene073674	0.855715	5.24E-62	-1.69E-46
MS.gene052947	MS.gene073674	0.831938	1.26E-55	-1.69E-46
MS.gene052954	MS.gene073674	0.817335	3.48E-52	-1.69E-46
MS.gene053058	MS.gene073674	0.843728	1.17E-58	-1.69E-46
MS.gene053564	MS.gene073674	0.815676	8.18E-52	-1.69E-46
MS.gene053590	MS.gene073674	0.824783	6.69E-54	-1.69E-46
MS.gene05364	MS.gene073674	0.837952	3.84E-57	-1.69E-46
MS.gene053931	MS.gene073674	0.82992	3.93E-55	-1.69E-46
MS.gene054004	MS.gene073674	0.859214	4.83E-63	-1.69E-46
MS.gene054005	MS.gene073674	0.80719	5.71E-50	-1.69E-46
MS.gene054403	MS.gene073674	0.881198	2.93E-70	-1.69E-46
MS.gene054413	MS.gene073674	0.808462	3.06E-50	-1.69E-46
MS.gene054657	MS.gene073674	0.80406	2.59E-49	-1.69E-46
MS.gene05469	MS.gene073674	0.834024	3.81E-56	-1.69E-46
MS.gene05517	MS.gene073674	0.820796	5.68E-53	-1.69E-46
MS.gene055513	MS.gene073674	0.801081	1.07E-48	-1.69E-46
MS.gene055623	MS.gene073674	0.813289	2.76E-51	-1.69E-46
MS.gene055841	MS.gene073674	0.812979	3.23E-51	-1.69E-46
MS.gene056181	MS.gene073674	0.813245	2.82E-51	-1.69E-46
MS.gene056631	MS.gene073674	0.808955	2.40E-50	-1.69E-46
MS.gene056699	MS.gene073674	0.844389	7.79E-59	-1.69E-46
MS.gene056787	MS.gene073674	0.828427	9.05E-55	-1.69E-46
MS.gene056986	MS.gene073674	0.853505	2.29E-61	-1.69E-46
MS.gene057034	MS.gene073674	0.807569	4.74E-50	-1.69E-46
MS.gene057102	MS.gene073674	0.825025	5.87E-54	-1.69E-46
MS.gene057140	MS.gene073674	0.804646	1.96E-49	-1.69E-46
MS.gene057208	MS.gene073674	0.831734	1.41E-55	-1.69E-46
MS.gene057234	MS.gene073674	0.817548	3.12E-52	-1.69E-46
MS.gene057392	MS.gene073674	0.846198	2.53E-59	-1.69E-46
MS.gene057694	MS.gene073674	0.851839	6.83E-61	-1.69E-46
MS.gene057705	MS.gene073674	0.866245	3.28E-65	-1.69E-46
MS.gene05781	MS.gene073674	0.831088	2.04E-55	-1.69E-46
MS.gene057890	MS.gene073674	-0.80983	1.56E-50	-1.69E-46
MS.gene057999	MS.gene073674	0.827641	1.40E-54	-1.69E-46
MS.gene058008	MS.gene073674	0.81107	8.41E-51	-1.69E-46
MS.gene058054	MS.gene073674	0.800913	1.15E-48	-1.69E-46
MS.gene058055	MS.gene073674	0.800406	1.46E-48	-1.69E-46
MS.gene058238	MS.gene073674	0.833038	6.71E-56	-1.69E-46
MS.gene058781	MS.gene073674	0.805297	1.43E-49	-1.69E-46
MS.gene058783	MS.gene073674	0.811095	8.31E-51	-1.69E-46
MS.gene058976	MS.gene073674	0.844957	5.48E-59	-1.69E-46
MS.gene059146	MS.gene073674	0.88419	2.37E-71	-1.69E-46
MS.gene05978	MS.gene073674	0.808532	2.96E-50	-1.69E-46
MS.gene05985	MS.gene073674	-0.831148	1.97E-55	-1.69E-46
MS.gene06011	MS.gene073674	0.811984	5.32E-51	-1.69E-46
MS.gene060244	MS.gene073674	0.870614	1.28E-66	-1.69E-46
MS.gene060365	MS.gene073674	0.828686	7.83E-55	-1.69E-46
MS.gene060429	MS.gene073674	0.807847	4.14E-50	-1.69E-46
MS.gene060763	MS.gene073674	0.822952	1.80E-53	-1.69E-46
MS.gene060935	MS.gene073674	0.846462	2.14E-59	-1.69E-46
MS.gene060937	MS.gene073674	0.838268	3.18E-57	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene00939	MS.gene073674	PPI
MS.gene98172	MS.gene073674	PPI
MS.gene92141	MS.gene073674	PPI
MS.gene25469	MS.gene073674	PPI
MS.gene073674	MS.gene002824	PPI
MS.gene073674	MS.gene35971	PPI
MS.gene073674	MS.gene59610	PPI
MS.gene073674	MS.gene004511	PPI
MS.gene047254	MS.gene073674	PPI
MS.gene073674	MS.gene25471	PPI
MS.gene073674	MS.gene33667	PPI
MS.gene073674	MS.gene068281	PPI
MS.gene24959	MS.gene073674	PPI
MS.gene073674	MS.gene33411	PPI
MS.gene073674	MS.gene34691	PPI
MS.gene073674	MS.gene79720	PPI
MS.gene79719	MS.gene073674	PPI
MS.gene073674	MS.gene055864	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073674.t1	MTR_5g022730	98.701	154	2	0	3	156	2	155	4.44e-111	312
MS.gene073674.t1	MTR_5g022710	95.455	154	7	0	3	156	2	155	4.68e-100	284
MS.gene073674.t1	MTR_7g021400	86.538	156	21	0	1	156	1	156	2.45e-92	265
MS.gene073674.t1	MTR_7g094150	85.897	156	22	0	1	156	1	156	8.84e-91	261
MS.gene073674.t1	MTR_7g094170	84.615	156	24	0	1	156	1	156	2.10e-89	257
MS.gene073674.t1	MTR_7g021380	82.692	156	27	0	1	156	1	156	2.01e-85	247
MS.gene073674.t1	MTR_4g032400	78.205	156	33	1	2	156	8	163	4.92e-85	246
MS.gene073674.t1	MTR_3g110048	75.949	158	36	1	1	156	1	158	6.04e-85	246
MS.gene073674.t1	MTR_7g094120	74.522	157	38	1	2	156	3	159	2.04e-83	242
MS.gene073674.t1	MTR_4g032450	73.248	157	41	1	1	156	19	175	2.74e-83	243
MS.gene073674.t1	MTR_7g094280	72.785	158	41	2	1	156	1	158	1.88e-79	232
MS.gene073674.t1	MTR_8g056060	73.248	157	41	1	1	156	1	157	5.95e-79	231
MS.gene073674.t1	MTR_5g085030	72.727	154	41	1	3	155	2	155	3.87e-78	229
MS.gene073674.t1	MTR_8g468480	70.323	155	45	1	3	156	2	156	9.72e-77	225
MS.gene073674.t1	MTR_7g094310	69.620	158	36	3	1	156	1	148	6.63e-72	213
MS.gene073674.t1	MTR_4g032510	68.153	157	42	3	2	156	3	153	1.32e-70	209
MS.gene073674.t1	MTR_4g032460	71.613	155	37	2	3	156	2	150	8.60e-70	207
MS.gene073674.t1	MTR_4g032500	66.026	156	46	2	2	156	3	152	3.24e-69	206
MS.gene073674.t1	MTR_4g033455	59.740	154	62	0	3	156	7	160	2.17e-64	194
MS.gene073674.t1	MTR_5g082340	65.806	155	41	2	3	156	2	145	1.58e-63	191
MS.gene073674.t1	MTR_4g017860	54.359	195	46	3	5	156	26	220	5.31e-63	193
MS.gene073674.t1	MTR_1g099870	84.314	102	14	1	57	156	2	103	9.38e-59	178
MS.gene073674.t1	MTR_4g021390	58.065	155	62	1	2	156	4	155	4.07e-58	178
MS.gene073674.t1	MTR_4g033460	59.286	140	57	0	3	142	7	146	8.85e-58	181
MS.gene073674.t1	MTR_4g033460	59.140	93	30	1	41	133	161	245	5.68e-30	109
MS.gene073674.t1	MTR_8g089730	69.106	123	21	1	34	156	1	106	1.44e-49	155
MS.gene073674.t1	MTR_7g094320	56.688	157	27	2	1	156	1	117	3.27e-49	154
MS.gene073674.t1	MTR_4g032420	61.417	127	34	3	31	156	38	150	7.69e-47	149
MS.gene073674.t1	MTR_7g006370	53.901	141	56	2	2	142	4	135	3.19e-43	140
MS.gene073674.t1	MTR_4g032470	50.685	146	28	2	12	156	32	134	4.89e-43	139
MS.gene073674.t1	MTR_7g094410	53.205	156	31	4	1	114	1	156	4.38e-41	135
MS.gene073674.t1	MTR_4g131980	63.866	119	37	3	3	119	2	116	3.53e-40	132
MS.gene073674.t1	MTR_4g127240	66.019	103	29	4	40	140	26	124	9.23e-40	130
MS.gene073674.t1	MTR_7g094360	47.093	172	38	4	1	119	1	172	1.18e-39	133
MS.gene073674.t1	MTR_8g056090	48.718	156	47	6	1	154	1	125	1.34e-36	123
MS.gene073674.t1	MTR_4g119422	48.299	147	69	2	2	146	227	368	1.00e-34	124
MS.gene073674.t1	MTR_1g112590	39.355	155	78	2	8	146	1	155	9.71e-33	114
MS.gene073674.t1	MTR_7g071200	69.565	69	20	1	89	156	4	72	5.35e-28	99.4
MS.gene073674.t1	MTR_2g066010	41.722	151	76	5	8	155	20	161	3.19e-27	100
MS.gene073674.t1	MTR_4g032520	43.750	144	39	4	29	154	1	120	2.47e-26	97.1
MS.gene073674.t1	MTR_2g065720	39.873	158	83	5	1	155	30	178	3.27e-26	98.6
MS.gene073674.t1	MTR_7g094350	56.522	92	27	1	1	92	1	79	7.45e-25	95.1
MS.gene073674.t1	MTR_7g094350	51.685	89	39	3	48	135	102	187	8.53e-20	82.0
MS.gene073674.t1	MTR_5g096950	37.107	159	79	4	1	155	1	142	6.64e-23	88.6
MS.gene073674.t1	MTR_4g032540	65.079	63	21	1	90	151	70	132	8.37e-23	87.8
MS.gene073674.t1	MTR_1g042510	34.615	156	64	4	8	146	1	135	2.28e-22	90.5
MS.gene073674.t1	MTR_2g018980	34.000	150	86	3	8	156	3	140	1.17e-21	85.5
MS.gene073674.t1	MTR_1g112570	36.691	139	63	4	8	128	1	132	6.50e-21	86.7
MS.gene073674.t1	MTR_5g078680	32.051	156	68	3	8	146	1	135	1.18e-19	82.8
MS.gene073674.t1	MTR_6g053620	36.806	144	81	5	8	146	17	155	4.78e-19	82.4
MS.gene073674.t1	MTR_6g053620	36.806	144	81	5	8	146	17	155	5.25e-19	82.4
MS.gene073674.t1	MTR_8g007195	34.286	140	80	4	10	143	13	146	2.91e-18	79.7
MS.gene073674.t1	MTR_7g077810	34.722	144	84	4	8	146	18	156	1.05e-17	78.6
MS.gene073674.t1	MTR_2g100825	32.667	150	92	4	1	146	4	148	6.23e-17	76.3
MS.gene073674.t1	MTR_8g007185	32.877	146	87	4	8	147	11	151	1.04e-16	75.5
MS.gene073674.t1	MTR_2g100830	33.793	145	80	5	10	146	13	149	1.10e-16	75.5
MS.gene073674.t1	MTR_8g007205	32.877	146	87	4	8	147	11	151	1.83e-16	74.7
MS.gene073674.t1	MTR_7g036780	33.333	141	83	6	1	135	1	136	5.22e-15	70.1
MS.gene073674.t1	MTR_4g131910	39.286	112	58	2	5	112	133	238	1.03e-14	69.3
MS.gene073674.t1	MTR_8g030670	30.345	145	91	3	10	149	20	159	2.79e-14	69.3
MS.gene073674.t1	MTR_3g061700	33.684	95	56	2	53	146	1	89	2.99e-12	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073674.t1	AT5G42190	77.059	170	23	1	3	156	2	171	2.93e-85	247
MS.gene073674.t1	AT1G75950	78.616	159	28	1	4	156	2	160	4.97e-84	244
MS.gene073674.t1	AT1G20140	72.393	163	38	2	1	156	1	163	5.87e-83	241
MS.gene073674.t1	AT2G25700	68.712	163	44	2	1	156	1	163	2.38e-78	229
MS.gene073674.t1	AT4G34210	69.481	154	43	2	4	156	2	152	8.33e-76	223
MS.gene073674.t1	AT4G34470	68.831	154	44	2	4	156	2	152	4.41e-75	221
MS.gene073674.t1	AT3G21860	66.452	155	46	3	4	156	2	152	2.48e-67	201
MS.gene073674.t1	AT3G60010	64.331	157	47	3	5	156	2	154	1.10e-66	200
MS.gene073674.t1	AT3G21850	63.871	155	51	3	4	156	2	153	3.22e-66	199
MS.gene073674.t1	AT2G03170	62.338	154	51	2	4	156	2	149	3.09e-63	191
MS.gene073674.t1	AT2G03190	55.422	166	61	3	4	156	2	167	6.00e-59	181
MS.gene073674.t1	AT3G60020	56.329	158	57	3	5	156	2	153	2.64e-56	174
MS.gene073674.t1	AT2G03160	48.677	189	61	3	4	156	2	190	1.49e-55	173
MS.gene073674.t1	AT3G21830	55.844	154	64	2	4	156	2	152	4.80e-55	170
MS.gene073674.t1	AT2G20160	54.902	153	63	2	4	155	2	149	2.69e-53	166
MS.gene073674.t1	AT3G25650	57.229	166	58	5	4	156	2	167	5.78e-53	166
MS.gene073674.t1	AT1G10230	56.774	155	64	2	4	155	2	156	6.60e-52	162
MS.gene073674.t1	AT3G21840	57.500	120	45	3	4	121	2	117	6.58e-37	123
MS.gene073674.t1	AT3G53060	65.116	86	23	3	29	113	1	80	3.15e-31	107
MS.gene073674.t1	AT3G61415	33.333	144	86	4	8	146	18	156	3.10e-16	74.7
MS.gene073674.t1	AT3G61415	33.333	144	86	4	8	146	18	156	3.39e-16	74.3
MS.gene073674.t1	AT2G45950	31.944	144	88	4	8	146	18	156	4.90e-16	73.9
MS.gene073674.t1	AT2G45950	31.944	144	88	4	8	146	18	156	4.90e-16	73.9
MS.gene073674.t1	AT2G45950	31.944	144	88	4	8	146	18	156	4.90e-16	73.9
MS.gene073674.t1	AT2G45950	31.944	144	88	4	8	146	18	156	5.02e-16	73.9
MS.gene073674.t1	AT2G45950	31.944	144	88	4	8	146	18	156	5.02e-16	73.9

Find 39 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGGTCTTGCGAATCTCTTC+AGG	0.314015	1.1:-35549509	None:intergenic
GGTCGATGAAGCGGTTGCTT+TGG	0.364221	1.1:+35548481	MS.gene073674:CDS
GAAATCATTCTTAATGTTGA+AGG	0.372420	1.1:-35549528	None:intergenic
GACTTAAGCTCATCCTCGTT+TGG	0.386875	1.1:-35548644	None:intergenic
CAACGTTACCAGCAAGATCT+TGG	0.386921	1.1:+35548565	MS.gene073674:CDS
CGAGGATGAGCTTAAGTCTT+GGG	0.419753	1.1:+35548649	MS.gene073674:CDS
TGATCATGTCTGCCACAGTC+TGG	0.431834	1.1:-35549475	None:intergenic
CGAGTTCGTCAAGGTTGATC+AGG	0.435035	1.1:+35548676	MS.gene073674:CDS
CACCTTCGCCAAGATCTTGC+TGG	0.436666	1.1:-35548573	None:intergenic
TGATTTCTCTCCAGAGGAAG+AGG	0.475889	1.1:+35549544	MS.gene073674:CDS
AAGATCTTGCTGGTAACGTT+GGG	0.477857	1.1:-35548563	None:intergenic
TTTGAATATCAAGAACCTGC+TGG	0.483519	1.1:+35549442	MS.gene073674:CDS
CGAACTTCCTCCTCTTCCTC+TGG	0.494352	1.1:-35549554	None:intergenic
TGCTGGTAACGTTGGGAAGA+GGG	0.508109	1.1:-35548556	None:intergenic
TTGCTGGTAACGTTGGGAAG+AGG	0.523250	1.1:-35548557	None:intergenic
CAAGATCTTGCTGGTAACGT+TGG	0.530853	1.1:-35548564	None:intergenic
GGAAGAGGAGGAAGTTCGTA+GGG	0.537389	1.1:+35549559	MS.gene073674:CDS
ATAATCATTCAAATGCCCAT+TGG	0.538622	1.1:-35549586	None:intergenic
CTGATCAACCTTGACGAACT+CGG	0.543997	1.1:-35548675	None:intergenic
ACGAGGATGAGCTTAAGTCT+TGG	0.546572	1.1:+35548648	MS.gene073674:CDS
AGGAAGAGGAGGAAGTTCGT+AGG	0.548370	1.1:+35549558	MS.gene073674:CDS
GACTGTGGCAGACATGATCA+AGG	0.557841	1.1:+35549478	MS.gene073674:CDS
AGTTCGTAGGGAAAACCAAT+GGG	0.562143	1.1:+35549571	MS.gene073674:CDS
AAGTTCGTAGGGAAAACCAA+TGG	0.564773	1.1:+35549570	MS.gene073674:CDS
TTGGGATTCCGAGTTCGTCA+AGG	0.598524	1.1:+35548667	MS.gene073674:CDS
TAAGAATGATTTCTCTCCAG+AGG	0.603350	1.1:+35549538	MS.gene073674:CDS
GAAGATGATTGCGCTGACAG+TGG	0.607194	1.1:+35548530	MS.gene073674:CDS
GACCTTCGAGGTCGATGAAG+CGG	0.610768	1.1:+35548472	MS.gene073674:CDS
TTCCGACGGTGAGACCTTCG+AGG	0.613590	1.1:+35548460	MS.gene073674:CDS
TTTCTCTCCAGAGGAAGAGG+AGG	0.615178	1.1:+35549547	MS.gene073674:CDS
TCTGGCATGTAAGATCCAGC+AGG	0.615709	1.1:-35549457	None:intergenic
ATCACTCTGAAGAGTTCCGA+CGG	0.622850	1.1:+35548446	MS.gene073674:CDS
AACCGCTTCATCGACCTCGA+AGG	0.623664	1.1:-35548474	None:intergenic
ACTGTGGCAGACATGATCAA+GGG	0.624146	1.1:+35549479	MS.gene073674:CDS
TACCAGCAAGATCTTGGCGA+AGG	0.627734	1.1:+35548571	MS.gene073674:CDS
TGCTGAAGACAAACCAAACG+AGG	0.629605	1.1:+35548631	MS.gene073674:CDS
CTGTGGCAGACATGATCAAG+GGG	0.638852	1.1:+35549480	MS.gene073674:CDS
GACCTCGAAGGTCTCACCGT+CGG	0.662584	1.1:-35548462	None:intergenic
GGATCTTACATGCCAGACTG+TGG	0.675179	1.1:+35549463	MS.gene073674:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTATTTATGTTTTCATT+TGG	+	chr1.1:35549034-35549053	MS.gene073674:intron	10.0%
!!	AAGGAAAAAAATATGATATC+AGG	-	chr1.1:35549406-35549425	None:intergenic	20.0%
!!	CAAAAAAAAAAACCTAGTTT+AGG	-	chr1.1:35548809-35548828	None:intergenic	20.0%
!!!	AGCAAATTTGCATTTTTTAA+TGG	-	chr1.1:35549377-35549396	None:intergenic	20.0%
!!!	AGGTTTTTTTTTTTGGTTTT+GGG	+	chr1.1:35548814-35548833	MS.gene073674:intron	20.0%
!!!	ATCATATTTTTTTCCTTTGT+AGG	+	chr1.1:35549409-35549428	MS.gene073674:intron	20.0%
!!!	ATTTCAATTTGTCTTTTGTT+TGG	+	chr1.1:35548880-35548899	MS.gene073674:intron	20.0%
!!!	CTAAACTAGGTTTTTTTTTT+TGG	+	chr1.1:35548807-35548826	MS.gene073674:intron	20.0%
!!!	TAGGTTTTTTTTTTTGGTTT+TGG	+	chr1.1:35548813-35548832	MS.gene073674:intron	20.0%
!!!	TTTATCGCTTTATTTGATTT+GGG	+	chr1.1:35548755-35548774	MS.gene073674:intron	20.0%
!!!	TTTCAATTTGTCTTTTGTTT+GGG	+	chr1.1:35548881-35548900	MS.gene073674:intron	20.0%
!!!	TTTTATCGCTTTATTTGATT+TGG	+	chr1.1:35548754-35548773	MS.gene073674:intron	20.0%
!	GAAATCATTCTTAATGTTGA+AGG	-	chr1.1:35549531-35549550	None:intergenic	25.0%
!!	GTGTTTATGTTATGTTTTGT+TGG	+	chr1.1:35549120-35549139	MS.gene073674:intron	25.0%
!!	TAATAATCCTATGTTTCTGA+TGG	+	chr1.1:35549331-35549350	MS.gene073674:intron	25.0%
!!!	ATTTGATTTGGGTTTTGTTT+TGG	+	chr1.1:35548766-35548785	MS.gene073674:intron	25.0%
!!!	CATCTTGGTAAGTTTTTTTA+GGG	+	chr1.1:35548715-35548734	MS.gene073674:intron	25.0%
!!!	TCATCTTGGTAAGTTTTTTT+AGG	+	chr1.1:35548714-35548733	MS.gene073674:intron	25.0%
!!!	TTGTTTGGGTTGAATTTAAT+GGG	+	chr1.1:35548895-35548914	MS.gene073674:intron	25.0%
!!!	TTTGTTTGGGTTGAATTTAA+TGG	+	chr1.1:35548894-35548913	MS.gene073674:intron	25.0%
	AAATAATTAGCAGCCTACAA+AGG	-	chr1.1:35549425-35549444	None:intergenic	30.0%
	AATTGTGCCTCTATTCTATT+GGG	+	chr1.1:35548971-35548990	MS.gene073674:intron	30.0%
	TGATAACCAAATGATGAACA+TGG	+	chr1.1:35549262-35549281	MS.gene073674:intron	30.0%
!	TTTAATGGCAATGAGTTGAA+GGG	-	chr1.1:35549362-35549381	None:intergenic	30.0%
!!	ATTCGTCTTGTTTGTTTGTT+TGG	+	chr1.1:35549167-35549186	MS.gene073674:intron	30.0%
!!	TTTTAATGGCAATGAGTTGA+AGG	-	chr1.1:35549363-35549382	None:intergenic	30.0%
!!!	TTGTTTTGGAATGTTTGGTT+GGG	+	chr1.1:35548780-35548799	MS.gene073674:intron	30.0%
!!!	TTTGTTTTGGAATGTTTGGT+TGG	+	chr1.1:35548779-35548798	MS.gene073674:intron	30.0%
	AGAGAATTTGACATAGTGAG+TGG	-	chr1.1:35549093-35549112	None:intergenic	35.0%
	ATGCTATTGTGAAATCCGAA+AGG	+	chr1.1:35548998-35549017	MS.gene073674:intron	35.0%
	CAATTGTGCCTCTATTCTAT+TGG	+	chr1.1:35548970-35548989	MS.gene073674:intron	35.0%
	CATATAGCCCAATAGAATAG+AGG	-	chr1.1:35548981-35549000	None:intergenic	35.0%
	GACAATCCATGTTCATCATT+TGG	-	chr1.1:35549271-35549290	None:intergenic	35.0%
	TAAGAATGATTTCTCTCCAG+AGG	+	chr1.1:35549538-35549557	MS.gene073674:CDS	35.0%
	TGCTATTGTGAAATCCGAAA+GGG	+	chr1.1:35548999-35549018	MS.gene073674:intron	35.0%
	TTTGAATATCAAGAACCTGC+TGG	+	chr1.1:35549442-35549461	MS.gene073674:CDS	35.0%
!!	TACGCTTTTTGATCTCATCT+TGG	+	chr1.1:35548700-35548719	MS.gene073674:CDS	35.0%
!!!	GGGTTTTGTTTTGGAATGTT+TGG	+	chr1.1:35548775-35548794	MS.gene073674:intron	35.0%
!!!	TGTTTTGGAATGTTTGGTTG+GGG	+	chr1.1:35548781-35548800	MS.gene073674:intron	35.0%
	AAGTTCGTAGGGAAAACCAA+TGG	+	chr1.1:35549570-35549589	MS.gene073674:CDS	40.0%
	AGTTCGTAGGGAAAACCAAT+GGG	+	chr1.1:35549571-35549590	MS.gene073674:CDS	40.0%
	ATCGCTGAATATTCCCCTTT+CGG	-	chr1.1:35549016-35549035	None:intergenic	40.0%
	GCTATTGTGAAATCCGAAAG+GGG	+	chr1.1:35549000-35549019	MS.gene073674:intron	40.0%
	GGTGTAACCATCAGAAACAT+AGG	-	chr1.1:35549341-35549360	None:intergenic	40.0%
!	AAGATCTTGCTGGTAACGTT+GGG	-	chr1.1:35548566-35548585	None:intergenic	40.0%
!!!	GGATTGTCATTTTCTCACGA+CGG	+	chr1.1:35549283-35549302	MS.gene073674:intron	40.0%
!!!	GTTTTGGAATGTTTGGTTGG+GGG	+	chr1.1:35548782-35548801	MS.gene073674:intron	40.0%
	AAGGTCTTGCGAATCTCTTC+AGG	-	chr1.1:35549512-35549531	None:intergenic	45.0%
	ACGAGGATGAGCTTAAGTCT+TGG	+	chr1.1:35548648-35548667	MS.gene073674:CDS	45.0%
	ACTGTGGCAGACATGATCAA+GGG	+	chr1.1:35549479-35549498	MS.gene073674:CDS	45.0%
	CAACGTTACCAGCAAGATCT+TGG	+	chr1.1:35548565-35548584	MS.gene073674:CDS	45.0%
	CGAGGATGAGCTTAAGTCTT+GGG	+	chr1.1:35548649-35548668	MS.gene073674:CDS	45.0%
	CTGATCAACCTTGACGAACT+CGG	-	chr1.1:35548678-35548697	None:intergenic	45.0%
	GACTTAAGCTCATCCTCGTT+TGG	-	chr1.1:35548647-35548666	None:intergenic	45.0%
	TGATTTCTCTCCAGAGGAAG+AGG	+	chr1.1:35549544-35549563	MS.gene073674:CDS	45.0%
	TGCTGAAGACAAACCAAACG+AGG	+	chr1.1:35548631-35548650	MS.gene073674:CDS	45.0%
!	ATCACTCTGAAGAGTTCCGA+CGG	+	chr1.1:35548446-35548465	MS.gene073674:CDS	45.0%
!	CAAGATCTTGCTGGTAACGT+TGG	-	chr1.1:35548567-35548586	None:intergenic	45.0%
	AGGAAGAGGAGGAAGTTCGT+AGG	+	chr1.1:35549558-35549577	MS.gene073674:CDS	50.0%
	CTGTGGCAGACATGATCAAG+GGG	+	chr1.1:35549480-35549499	MS.gene073674:CDS	50.0%
	GACTGTGGCAGACATGATCA+AGG	+	chr1.1:35549478-35549497	MS.gene073674:CDS	50.0%
	GGAAGAGGAGGAAGTTCGTA+GGG	+	chr1.1:35549559-35549578	MS.gene073674:CDS	50.0%
	GGATCTTACATGCCAGACTG+TGG	+	chr1.1:35549463-35549482	MS.gene073674:CDS	50.0%
	TACCAGCAAGATCTTGGCGA+AGG	+	chr1.1:35548571-35548590	MS.gene073674:CDS	50.0%
	TCTGGCATGTAAGATCCAGC+AGG	-	chr1.1:35549460-35549479	None:intergenic	50.0%
	TGATCATGTCTGCCACAGTC+TGG	-	chr1.1:35549478-35549497	None:intergenic	50.0%
	TTGGGATTCCGAGTTCGTCA+AGG	+	chr1.1:35548667-35548686	MS.gene073674:CDS	50.0%
	TTGGTTGGGGGTCCTAAACT+AGG	+	chr1.1:35548794-35548813	MS.gene073674:intron	50.0%
	TTTCTCTCCAGAGGAAGAGG+AGG	+	chr1.1:35549547-35549566	MS.gene073674:CDS	50.0%
!	CGAGTTCGTCAAGGTTGATC+AGG	+	chr1.1:35548676-35548695	MS.gene073674:CDS	50.0%
!	GAAGATGATTGCGCTGACAG+TGG	+	chr1.1:35548530-35548549	MS.gene073674:CDS	50.0%
!	TGCTGGTAACGTTGGGAAGA+GGG	-	chr1.1:35548559-35548578	None:intergenic	50.0%
!	TTGCTGGTAACGTTGGGAAG+AGG	-	chr1.1:35548560-35548579	None:intergenic	50.0%
	AACCGCTTCATCGACCTCGA+AGG	-	chr1.1:35548477-35548496	None:intergenic	55.0%
	CACCTTCGCCAAGATCTTGC+TGG	-	chr1.1:35548576-35548595	None:intergenic	55.0%
	CGAACTTCCTCCTCTTCCTC+TGG	-	chr1.1:35549557-35549576	None:intergenic	55.0%
	GACCTTCGAGGTCGATGAAG+CGG	+	chr1.1:35548472-35548491	MS.gene073674:CDS	55.0%
	GGTCGATGAAGCGGTTGCTT+TGG	+	chr1.1:35548481-35548500	MS.gene073674:CDS	55.0%
	GACCTCGAAGGTCTCACCGT+CGG	-	chr1.1:35548465-35548484	None:intergenic	60.0%
	TTCCGACGGTGAGACCTTCG+AGG	+	chr1.1:35548460-35548479	MS.gene073674:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	35548425	35549604	35548425	ID=MS.gene073674
chr1.1	mRNA	35548425	35549604	35548425	ID=MS.gene073674.t1;Parent=MS.gene073674
chr1.1	exon	35548425	35548721	35548425	ID=MS.gene073674.t1.exon1;Parent=MS.gene073674.t1
chr1.1	CDS	35548425	35548721	35548425	ID=cds.MS.gene073674.t1;Parent=MS.gene073674.t1
chr1.1	exon	35549431	35549604	35549431	ID=MS.gene073674.t1.exon2;Parent=MS.gene073674.t1
chr1.1	CDS	35549431	35549604	35549431	ID=cds.MS.gene073674.t1;Parent=MS.gene073674.t1

Gene Sequence

>MS.gene073674

ATGTCTTCAACAACAAGAAAGATCACTCTGAAGAGTTCCGACGGTGAGACCTTCGAGGTCGATGAAGCGGTTGCTTTGGAATCTCAGACGATCAAGCATATGATCGAAGATGATTGCGCTGACAGTGGAATCCCTCTTCCCAACGTTACCAGCAAGATCTTGGCGAAGGTGATTGAGTATTGCAAGAAGCATGTTGACGCTGCTGCTGCTGAAGACAAACCAAACGAGGATGAGCTTAAGTCTTGGGATTCCGAGTTCGTCAAGGTTGATCAGGCTACGCTTTTTGATCTCATCTTGGTAAGTTTTTTTAGGGTTTTAATTATTGTTTGTTTTATCGCTTTATTTGATTTGGGTTTTGTTTTGGAATGTTTGGTTGGGGGTCCTAAACTAGGTTTTTTTTTTTGGTTTTGGGAATTGATTGAGCTATTTTTTATTTGATCGTTGAAGTTTTTTCAATTTCAATTTGTCTTTTGTTTGGGTTGAATTTAATGGGTTATCAGTAGTAGTTGTTTGAATTGTGATTGTTGTTGTTGTTGATGCTGTTACAATTGTGCCTCTATTCTATTGGGCTATATGCTATTGTGAAATCCGAAAGGGGAATATTCAGCGATTTTATTTATGTTTTCATTTGGATATAATTGATATTCTTATTCTTTTTACATTAACCACTCACTATGTCAAATTCTCTGTTTTGTGTGTTTATGTTATGTTTTGTTGGCTTATCTTTTCATTGTGTTCAAATATTCGTCTTGTTTGTTTGTTTGGATAACTTGCACAATGCAATGCTATTGTGTTTATTATTCATTCAGTGTTTGTATCACACAATCAATCACTTACTGATAACCAAATGATGAACATGGATTGTCATTTTCTCACGACGGTCGTCTGAGTTAACTATGATTGATGTAATAATCCTATGTTTCTGATGGTTACACCCTTCAACTCATTGCCATTAAAAAATGCAAATTTGCTTTGAATCCTGATATCATATTTTTTTCCTTTGTAGGCTGCTAATTATTTGAATATCAAGAACCTGCTGGATCTTACATGCCAGACTGTGGCAGACATGATCAAGGGGAAGACACCTGAAGAGATTCGCAAGACCTTCAACATTAAGAATGATTTCTCTCCAGAGGAAGAGGAGGAAGTTCGTAGGGAAAACCAATGGGCATTTGAATGA

Protein sequence

>MS.gene073674.t1

MSSTTRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVDAAAAEDKPNEDELKSWDSEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPEEEEEVRRENQWAFE