Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27059.t1 | XP_003589458.2 | 97.1 | 751 | 18 | 1 | 3 | 753 | 1 | 747 | 0.00E+00 | 1449.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27059.t1 | Q9M041 | 57.9 | 736 | 257 | 8 | 13 | 748 | 225 | 907 | 1.4e-237 | 823.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27059.t1 | G7I746 | 97.1 | 751 | 18 | 1 | 3 | 753 | 1 | 747 | 0.0e+00 | 1449.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene27059 | 0.85073 | 1.41E-60 | -1.69E-46 |
| MS.gene049254 | MS.gene27059 | 0.862567 | 4.63E-64 | -1.69E-46 |
| MS.gene049271 | MS.gene27059 | 0.804562 | 2.04E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene27059 | 0.809322 | 2.00E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene27059 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene049404 | MS.gene27059 | 0.843449 | 1.39E-58 | -1.69E-46 |
| MS.gene049501 | MS.gene27059 | 0.801768 | 7.70E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene27059 | 0.855974 | 4.40E-62 | -1.69E-46 |
| MS.gene049821 | MS.gene27059 | 0.816783 | 4.63E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene27059 | 0.8314 | 1.71E-55 | -1.69E-46 |
| MS.gene049825 | MS.gene27059 | 0.824581 | 7.47E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene27059 | 0.812538 | 4.03E-51 | -1.69E-46 |
| MS.gene049873 | MS.gene27059 | 0.810431 | 1.16E-50 | -1.69E-46 |
| MS.gene050026 | MS.gene27059 | 0.811548 | 6.63E-51 | -1.69E-46 |
| MS.gene050273 | MS.gene27059 | 0.811316 | 7.44E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene27059 | 0.809994 | 1.44E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene27059 | 0.826381 | 2.80E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene27059 | 0.825995 | 3.46E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene27059 | 0.820422 | 6.92E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene27059 | 0.802269 | 6.08E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene27059 | 0.807399 | 5.15E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene27059 | 0.810222 | 1.28E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene27059 | 0.818756 | 1.66E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene27059 | 0.860198 | 2.44E-63 | -1.69E-46 |
| MS.gene051279 | MS.gene27059 | 0.85441 | 1.25E-61 | -1.69E-46 |
| MS.gene051332 | MS.gene27059 | 0.80021 | 1.60E-48 | -1.69E-46 |
| MS.gene051343 | MS.gene27059 | 0.809969 | 1.46E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene27059 | 0.802128 | 6.50E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene27059 | 0.80703 | 6.17E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene27059 | 0.824458 | 7.99E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene27059 | 0.830047 | 3.66E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene27059 | 0.842858 | 2.00E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene27059 | 0.897718 | 1.07E-76 | -1.69E-46 |
| MS.gene051957 | MS.gene27059 | 0.803869 | 2.84E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene27059 | 0.815484 | 9.03E-52 | -1.69E-46 |
| MS.gene052037 | MS.gene27059 | 0.80364 | 3.17E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene27059 | -0.806351 | 8.58E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene27059 | 0.831867 | 1.31E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene27059 | 0.848432 | 6.15E-60 | -1.69E-46 |
| MS.gene052519 | MS.gene27059 | 0.822925 | 1.82E-53 | -1.69E-46 |
| MS.gene052533 | MS.gene27059 | 0.801855 | 7.39E-49 | -1.69E-46 |
| MS.gene052561 | MS.gene27059 | 0.801748 | 7.78E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene27059 | 0.847583 | 1.06E-59 | -1.69E-46 |
| MS.gene052584 | MS.gene27059 | 0.853512 | 2.28E-61 | -1.69E-46 |
| MS.gene052609 | MS.gene27059 | 0.804791 | 1.82E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene27059 | 0.836069 | 1.16E-56 | -1.69E-46 |
| MS.gene052867 | MS.gene27059 | 0.803529 | 3.34E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene27059 | 0.837872 | 4.02E-57 | -1.69E-46 |
| MS.gene053122 | MS.gene27059 | 0.82683 | 2.19E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene27059 | 0.823315 | 1.48E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene27059 | 0.886109 | 4.55E-72 | -1.69E-46 |
| MS.gene053296 | MS.gene27059 | 0.808935 | 2.43E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene27059 | 0.814645 | 1.39E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene27059 | 0.814997 | 1.16E-51 | -1.69E-46 |
| MS.gene053883 | MS.gene27059 | 0.801667 | 8.08E-49 | -1.69E-46 |
| MS.gene053995 | MS.gene27059 | 0.805655 | 1.20E-49 | -1.69E-46 |
| MS.gene05410 | MS.gene27059 | 0.8125 | 4.11E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene27059 | 0.822089 | 2.85E-53 | -1.69E-46 |
| MS.gene05423 | MS.gene27059 | 0.833292 | 5.80E-56 | -1.69E-46 |
| MS.gene054576 | MS.gene27059 | 0.868855 | 4.79E-66 | -1.69E-46 |
| MS.gene054584 | MS.gene27059 | 0.823112 | 1.65E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene27059 | 0.841067 | 5.95E-58 | -1.69E-46 |
| MS.gene054651 | MS.gene27059 | 0.870073 | 1.92E-66 | -1.69E-46 |
| MS.gene054775 | MS.gene27059 | 0.847272 | 1.28E-59 | -1.69E-46 |
| MS.gene054943 | MS.gene27059 | 0.804117 | 2.52E-49 | -1.69E-46 |
| MS.gene054991 | MS.gene27059 | 0.81236 | 4.41E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene27059 | 0.807583 | 4.71E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene27059 | 0.803054 | 4.19E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene27059 | 0.810476 | 1.13E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene27059 | 0.828104 | 1.08E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene27059 | 0.836222 | 1.06E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene27059 | 0.805659 | 1.20E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene27059 | 0.813284 | 2.77E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene27059 | 0.818842 | 1.59E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene27059 | 0.848055 | 7.82E-60 | -1.69E-46 |
| MS.gene055580 | MS.gene27059 | -0.813926 | 2.00E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene27059 | 0.839148 | 1.88E-57 | -1.69E-46 |
| MS.gene055589 | MS.gene27059 | 0.845533 | 3.83E-59 | -1.69E-46 |
| MS.gene055724 | MS.gene27059 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene27059 | 0.836625 | 8.38E-57 | -1.69E-46 |
| MS.gene055808 | MS.gene27059 | 0.803406 | 3.54E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene27059 | 0.805873 | 1.08E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene27059 | 0.800517 | 1.39E-48 | -1.69E-46 |
| MS.gene05604 | MS.gene27059 | 0.808485 | 3.03E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene27059 | 0.863087 | 3.20E-64 | -1.69E-46 |
| MS.gene056162 | MS.gene27059 | 0.808471 | 3.05E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene27059 | 0.821595 | 3.71E-53 | -1.69E-46 |
| MS.gene056215 | MS.gene27059 | 0.812554 | 4.00E-51 | -1.69E-46 |
| MS.gene056242 | MS.gene27059 | 0.8062 | 9.23E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene27059 | 0.857608 | 1.45E-62 | -1.69E-46 |
| MS.gene056366 | MS.gene27059 | 0.858336 | 8.84E-63 | -1.69E-46 |
| MS.gene056507 | MS.gene27059 | 0.811732 | 6.04E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene27059 | 0.801061 | 1.08E-48 | -1.69E-46 |
| MS.gene056595 | MS.gene27059 | 0.802564 | 5.29E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene27059 | 0.818926 | 1.52E-52 | -1.69E-46 |
| MS.gene056776 | MS.gene27059 | 0.800719 | 1.26E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene27059 | 0.856239 | 3.68E-62 | -1.69E-46 |
| MS.gene05690 | MS.gene27059 | 0.82154 | 3.82E-53 | -1.69E-46 |
| MS.gene057027 | MS.gene27059 | 0.814837 | 1.26E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene27059 | 0.830309 | 3.16E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene27059 | 0.834669 | 2.62E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene27059 | 0.821161 | 4.68E-53 | -1.69E-46 |
| MS.gene057414 | MS.gene27059 | 0.810122 | 1.35E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene27059 | 0.845266 | 4.52E-59 | -1.69E-46 |
| MS.gene057915 | MS.gene27059 | 0.829768 | 4.28E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene27059 | 0.811183 | 7.95E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene27059 | 0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene058279 | MS.gene27059 | 0.807267 | 5.50E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene27059 | 0.821831 | 3.28E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene27059 | 0.838229 | 3.26E-57 | -1.69E-46 |
| MS.gene058636 | MS.gene27059 | 0.806884 | 6.62E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene27059 | 0.817751 | 2.80E-52 | -1.69E-46 |
| MS.gene058681 | MS.gene27059 | 0.812753 | 3.62E-51 | -1.69E-46 |
| MS.gene05894 | MS.gene27059 | 0.800544 | 1.37E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene27059 | 0.833637 | 4.76E-56 | -1.69E-46 |
| MS.gene059015 | MS.gene27059 | 0.807797 | 4.24E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene27059 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene27059 | 0.804036 | 2.62E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene27059 | 0.813099 | 3.04E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene27059 | 0.827723 | 1.34E-54 | -1.69E-46 |
| MS.gene059625 | MS.gene27059 | 0.872347 | 3.41E-67 | -1.69E-46 |
| MS.gene059725 | MS.gene27059 | 0.805445 | 1.33E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene27059 | 0.80247 | 5.52E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene27059 | -0.810258 | 1.26E-50 | -1.69E-46 |
| MS.gene059965 | MS.gene27059 | 0.838852 | 2.25E-57 | -1.69E-46 |
| MS.gene060365 | MS.gene27059 | 0.841061 | 5.97E-58 | -1.69E-46 |
| MS.gene060373 | MS.gene27059 | 0.81616 | 6.38E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene27059 | 0.826754 | 2.28E-54 | -1.69E-46 |
| MS.gene060519 | MS.gene27059 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene060521 | MS.gene27059 | 0.816224 | 6.17E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene27059 | 0.835183 | 1.95E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene27059 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene060935 | MS.gene27059 | 0.809186 | 2.14E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene27059 | 0.812427 | 4.26E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene27059 | 0.814188 | 1.75E-51 | -1.69E-46 |
| MS.gene061188 | MS.gene27059 | 0.807994 | 3.85E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27059.t1 | MTR_1g024820 | 97.071 | 751 | 18 | 1 | 3 | 753 | 1 | 747 | 0.0 | 1503 |
| MS.gene27059.t1 | MTR_1g024155 | 76.119 | 134 | 26 | 2 | 237 | 369 | 1 | 129 | 5.93e-61 | 201 |
| MS.gene27059.t1 | MTR_8g092520 | 95.312 | 64 | 3 | 0 | 371 | 434 | 10 | 73 | 1.14e-33 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27059.t1 | AT5G01310 | 58.300 | 741 | 248 | 10 | 13 | 749 | 23 | 706 | 0.0 | 858 |
Find 166 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAAAGCCTTCACTTAATT+TGG | 0.070308 | 1.1:-756688 | None:intergenic |
| CAACTGCATGGATATCTATT+TGG | 0.167991 | 1.1:-756542 | None:intergenic |
| CGCAGATGCAAAACCCATTT+TGG | 0.177970 | 1.1:+755188 | MS.gene27059:intron |
| CATTATATTAGATTGGATTT+TGG | 0.192997 | 1.1:-756826 | None:intergenic |
| ATACCGAAAGGTGCTCATTT+TGG | 0.219069 | 1.1:-758969 | None:intergenic |
| CAACATGGGTAAAGAACTTC+TGG | 0.235682 | 1.1:-757268 | None:intergenic |
| AGTATTTGTAGAATGATTTC+TGG | 0.242332 | 1.1:-758536 | None:intergenic |
| TGCACGCAGTGGGTTTAAAA+TGG | 0.254686 | 1.1:+759001 | MS.gene27059:CDS |
| ACCAACTAAGATTACCAAAA+TGG | 0.255360 | 1.1:-755202 | None:intergenic |
| TAATCATTGTTCAGACAATT+TGG | 0.269486 | 1.1:-758373 | None:intergenic |
| GGTCTTTGTGGATTCATATT+AGG | 0.285029 | 1.1:-758352 | None:intergenic |
| TATAATGAAATTCCTGAAAA+AGG | 0.291515 | 1.1:+756842 | MS.gene27059:CDS |
| TGCGTTCCTCTTCTCGCACC+TGG | 0.293905 | 1.1:+755265 | MS.gene27059:CDS |
| TTTCAGGATGCATAGCTATT+AGG | 0.300282 | 1.1:-758738 | None:intergenic |
| GCGCATGCTAATTCCAAGTT+AGG | 0.313836 | 1.1:+756975 | MS.gene27059:CDS |
| CACCCTGACAAAATGTTATT+CGG | 0.326546 | 1.1:-756710 | None:intergenic |
| TCTCGATCTGTTAAACGATC+TGG | 0.327806 | 1.1:+756594 | MS.gene27059:CDS |
| TTCAGACAATTTGGTCTTTG+TGG | 0.329030 | 1.1:-758364 | None:intergenic |
| GACTCTACTTCCCAGACTTC+TGG | 0.329410 | 1.1:+756909 | MS.gene27059:CDS |
| CTGCCTTGTCATGGTTGAAT+TGG | 0.331343 | 1.1:-757109 | None:intergenic |
| TTGGTTGCAGACTCCAGTTC+AGG | 0.336397 | 1.1:-758220 | None:intergenic |
| TTAAAGCCTTCACTTAATTT+GGG | 0.349736 | 1.1:-756687 | None:intergenic |
| GACTTTAAGCGGGGTATGTT+TGG | 0.350434 | 1.1:-759929 | None:intergenic |
| AAGGTGGATTTCCCGCTTCC+AGG | 0.350962 | 1.1:-755228 | None:intergenic |
| GGAATTTCATTATATTAGAT+TGG | 0.352074 | 1.1:-756833 | None:intergenic |
| CCTACTCGAAAACGGGCGTT+TGG | 0.353806 | 1.1:+759988 | MS.gene27059:CDS |
| AAATACAAGGGAACCCTTGA+TGG | 0.361121 | 1.1:+758607 | MS.gene27059:CDS |
| AACCTTTCACATGGCTGCTT+CGG | 0.364818 | 1.1:+756786 | MS.gene27059:CDS |
| CTATTGCTTTAGGACACTAT+TGG | 0.364954 | 1.1:+756381 | MS.gene27059:intron |
| ATCACTCGCCTTTATTCAAC+TGG | 0.366524 | 1.1:+757296 | MS.gene27059:CDS |
| AACTGCATGGATATCTATTT+GGG | 0.366972 | 1.1:-756541 | None:intergenic |
| TGACGACAAGCTACTGTCTA+TGG | 0.369859 | 1.1:+759874 | MS.gene27059:CDS |
| CAAAGAAGGCATGGGGATCA+TGG | 0.381280 | 1.1:+758701 | MS.gene27059:CDS |
| CACCTGGGTTCGCGTTTGTC+AGG | 0.384918 | 1.1:+755281 | MS.gene27059:CDS |
| TGGAATTAGCATGCGCTGTT+GGG | 0.385424 | 1.1:-756968 | None:intergenic |
| AAATCTGCTGTTGAAATAGA+TGG | 0.385657 | 1.1:-757086 | None:intergenic |
| GCAAACCTCCAGTTGAATAA+AGG | 0.388247 | 1.1:-757304 | None:intergenic |
| TGATTCCCTCTGCAAAGATA+TGG | 0.394356 | 1.1:+756938 | MS.gene27059:CDS |
| GACATGGGTCACACCTTCTC+TGG | 0.401712 | 1.1:-758314 | None:intergenic |
| CCTGCTTACCTACTCGAAAA+CGG | 0.410998 | 1.1:+759980 | MS.gene27059:CDS |
| ATTGATGAGGTATCTATTCA+TGG | 0.413174 | 1.1:+759833 | MS.gene27059:CDS |
| CTGCTTACCTACTCGAAAAC+GGG | 0.421330 | 1.1:+759981 | MS.gene27059:CDS |
| CCAACTAAGATTACCAAAAT+GGG | 0.422030 | 1.1:-755201 | None:intergenic |
| TGATGCCGCAGGTCCTGAAC+TGG | 0.422054 | 1.1:+758207 | MS.gene27059:CDS |
| TAGTGCAGCTAGAGCATTGA+AGG | 0.422729 | 1.1:+756440 | MS.gene27059:CDS |
| TGCCGCTTTGGATTTAACTA+AGG | 0.423436 | 1.1:-757228 | None:intergenic |
| TCTTTAGATGCAGTATCAAC+TGG | 0.427580 | 1.1:-756873 | None:intergenic |
| CGAGAAATACACAGCTTAGC+AGG | 0.436953 | 1.1:-756576 | None:intergenic |
| ACTAATATGCGACTTTAAGC+GGG | 0.448216 | 1.1:-759939 | None:intergenic |
| CAGAAGTTCTTTACCCATGT+TGG | 0.449612 | 1.1:+757269 | MS.gene27059:CDS |
| AAATGTAGTTGTCGCATTGA+AGG | 0.453847 | 1.1:-759713 | None:intergenic |
| GCTTATGCATCACTATTTGA+AGG | 0.454340 | 1.1:+758424 | MS.gene27059:CDS |
| TTTATAGATTAGCACTTACT+TGG | 0.457038 | 1.1:-760023 | None:intergenic |
| TTGGAATTAGCATGCGCTGT+TGG | 0.457695 | 1.1:-756969 | None:intergenic |
| AGCACCTTTCGGTATTGAAA+AGG | 0.458468 | 1.1:+758977 | MS.gene27059:CDS |
| TGCCTTCTTTGTGCTCCCAT+CGG | 0.460312 | 1.1:-758689 | None:intergenic |
| TACGGGTTCTAGAGATGAAA+AGG | 0.465029 | 1.1:+758645 | MS.gene27059:CDS |
| CTCGATCTGTTAAACGATCT+GGG | 0.465731 | 1.1:+756595 | MS.gene27059:CDS |
| TCTTGATGATATTCCGACTC+TGG | 0.466974 | 1.1:+757058 | MS.gene27059:CDS |
| TGTCCAAAATGAGCACCTTT+CGG | 0.469516 | 1.1:+758966 | MS.gene27059:CDS |
| TGCAGAGTACTCAAATAAGA+TGG | 0.475710 | 1.1:+757154 | MS.gene27059:CDS |
| AGCAGATATTATTGTTGAGA+AGG | 0.477645 | 1.1:+757130 | MS.gene27059:CDS |
| CTTGAGTGAGAATTCTTCAC+TGG | 0.479309 | 1.1:+759035 | MS.gene27059:CDS |
| CAAGTCAACTAGAACAAGTC+TGG | 0.479496 | 1.1:-757183 | None:intergenic |
| ATGCTCTAGCTGCACTACTT+AGG | 0.487592 | 1.1:-756434 | None:intergenic |
| CGACTGAAACCTGGCGGTGG+AGG | 0.488427 | 1.1:+758166 | MS.gene27059:CDS |
| TCTTCACTGGTATTTCGCCT+TGG | 0.488540 | 1.1:+759048 | MS.gene27059:CDS |
| CTTTAGGACACTATTGGAAA+CGG | 0.488697 | 1.1:+756387 | MS.gene27059:intron |
| CTCGAAAACGGGCGTTTGGT+TGG | 0.491923 | 1.1:+759992 | MS.gene27059:CDS |
| TTCGAGTAGGTAAGCAGGAA+AGG | 0.492668 | 1.1:-759975 | None:intergenic |
| CAGCTAGAGCATTGAAGGAT+GGG | 0.492858 | 1.1:+756445 | MS.gene27059:CDS |
| GTAATCTTAGTTGGTGCACC+TGG | 0.497340 | 1.1:+755210 | MS.gene27059:CDS |
| TCTCCTTTGTTCACCAGAGA+AGG | 0.497892 | 1.1:+758301 | MS.gene27059:CDS |
| TTAGTTGGTGCACCTGGAAG+CGG | 0.499378 | 1.1:+755216 | MS.gene27059:CDS |
| AAGAGGCTGCAAGGTTCTCC+AGG | 0.499868 | 1.1:+758399 | MS.gene27059:CDS |
| GCACGCAGTGGGTTTAAAAT+GGG | 0.503543 | 1.1:+759002 | MS.gene27059:CDS |
| ACATTTACATGTTATTAGCC+AGG | 0.504468 | 1.1:+759730 | MS.gene27059:CDS |
| TATGCATCCTGAAAAGCATA+AGG | 0.504572 | 1.1:+758747 | MS.gene27059:CDS |
| AGTAAGAGAGATGCTGATCA+TGG | 0.505253 | 1.1:+758568 | MS.gene27059:CDS |
| GCGAGTGATGTCTCCAACAT+GGG | 0.513703 | 1.1:-757282 | None:intergenic |
| TTAGGGTCAAAAGATATAGA+AGG | 0.514351 | 1.1:+756993 | MS.gene27059:CDS |
| GTGGATTCATATTAGGTCCA+AGG | 0.518443 | 1.1:-758345 | None:intergenic |
| AAGAGAAACTTGATTGTGAC+AGG | 0.518643 | 1.1:-757039 | None:intergenic |
| TACTAATATGCGACTTTAAG+CGG | 0.518681 | 1.1:-759940 | None:intergenic |
| CTGAACAATGATTATGAAAG+AGG | 0.518865 | 1.1:+758382 | MS.gene27059:CDS |
| TAGTTGGTGCACCTGGAAGC+GGG | 0.522269 | 1.1:+755217 | MS.gene27059:CDS |
| GGAAGAGTGTATTCATTGAC+AGG | 0.523105 | 1.1:+756466 | MS.gene27059:CDS |
| AAAGAAGGCATGGGGATCAT+GGG | 0.523356 | 1.1:+758702 | MS.gene27059:CDS |
| ATTTGCAGGCGACTGAAACC+TGG | 0.527138 | 1.1:+758157 | MS.gene27059:intron |
| GCAGAGTACTCAAATAAGAT+GGG | 0.527394 | 1.1:+757155 | MS.gene27059:CDS |
| CGCATGCTAATTCCAAGTTA+GGG | 0.528744 | 1.1:+756976 | MS.gene27059:CDS |
| GAGAGATGCTGATCATGGAT+TGG | 0.529303 | 1.1:+758573 | MS.gene27059:CDS |
| GCGTTCCTCTTCTCGCACCT+GGG | 0.532165 | 1.1:+755266 | MS.gene27059:CDS |
| ATTTGAAGAATAAGAAGCAC+TGG | 0.536704 | 1.1:+759768 | MS.gene27059:CDS |
| AAAGGAGAAGATGAAGGTAG+AGG | 0.537684 | 1.1:-758286 | None:intergenic |
| AACCGATGGGAGCACAAAGA+AGG | 0.540085 | 1.1:+758687 | MS.gene27059:CDS |
| GGTCAGACTGATAAATCTGC+TGG | 0.543721 | 1.1:+757014 | MS.gene27059:CDS |
| ACCCATGTCATACATGTCCT+TGG | 0.547057 | 1.1:+758328 | MS.gene27059:CDS |
| ATGGGAGCACAAAGAAGGCA+TGG | 0.547623 | 1.1:+758692 | MS.gene27059:CDS |
| GCATCTAAAGAAAATACCAT+TGG | 0.549466 | 1.1:+756885 | MS.gene27059:CDS |
| TTCGAACATGGACATGGACA+TGG | 0.549674 | 1.1:+755038 | None:intergenic |
| TCGAGTAGGTAAGCAGGAAA+GGG | 0.550559 | 1.1:-759974 | None:intergenic |
| ACTATTGGAAACGGTAAAGC+AGG | 0.551394 | 1.1:+756396 | MS.gene27059:CDS |
| GTACATCAAAATGAAAACCT+TGG | 0.551599 | 1.1:+758472 | MS.gene27059:CDS |
| GTTAAACGATCTGGGCATGA+AGG | 0.553439 | 1.1:+756603 | MS.gene27059:CDS |
| TTCATCTCTAGAACCCGTAA+AGG | 0.555487 | 1.1:-758641 | None:intergenic |
| TGGGAGCACAAAGAAGGCAT+GGG | 0.556101 | 1.1:+758693 | MS.gene27059:CDS |
| GCATTGACACCTCCACCGCC+AGG | 0.557019 | 1.1:-758175 | None:intergenic |
| AGGTCGTGTCAAAACCATCA+AGG | 0.558441 | 1.1:-758621 | None:intergenic |
| TCATTGCAAATGCTGCGAAC+TGG | 0.559496 | 1.1:+757336 | MS.gene27059:CDS |
| GGAAACCTTTGTTGTTGTCG+AGG | 0.561531 | 1.1:-755062 | None:intergenic |
| ATAGTGATGCATAAGCATCC+TGG | 0.561975 | 1.1:-758417 | None:intergenic |
| TCAGAGCATAAAAGAACCGA+TGG | 0.563322 | 1.1:+758673 | MS.gene27059:CDS |
| GCAGCTAGAGCATTGAAGGA+TGG | 0.563714 | 1.1:+756444 | MS.gene27059:CDS |
| CATAACCTCTTCACAGAAGG+TGG | 0.564702 | 1.1:-755244 | None:intergenic |
| GCGAACCCAGGTGCGAGAAG+AGG | 0.566181 | 1.1:-755271 | None:intergenic |
| CTCGTATTCGAACATGGACA+TGG | 0.566252 | 1.1:+755032 | None:intergenic |
| AGCTACTGTCTATGGAGTTG+AGG | 0.566802 | 1.1:+759882 | MS.gene27059:CDS |
| TTTGTCCATATCTTTGCAGA+GGG | 0.569456 | 1.1:-756943 | None:intergenic |
| AAAGCAAAGACTCTTTCACC+TGG | 0.571665 | 1.1:+758247 | MS.gene27059:CDS |
| GGCGAGTGATGTCTCCAACA+TGG | 0.576042 | 1.1:-757283 | None:intergenic |
| AAGGAGAAGATGAAGGTAGA+GGG | 0.576283 | 1.1:-758285 | None:intergenic |
| AACATGGGTAAAGAACTTCT+GGG | 0.584861 | 1.1:-757267 | None:intergenic |
| TAATATCTGCTGCCTTGTCA+TGG | 0.588066 | 1.1:-757118 | None:intergenic |
| GGGACGACAACAGCATTCCC+AGG | 0.588798 | 1.1:-758265 | None:intergenic |
| GTCCAAGGACATGTATGACA+TGG | 0.597354 | 1.1:-758330 | None:intergenic |
| AACCTGACAAACGCGAACCC+AGG | 0.598184 | 1.1:-755283 | None:intergenic |
| GACCGAAGCAGCCATGTGAA+AGG | 0.599956 | 1.1:-756788 | None:intergenic |
| TGACTTGCTTGAAATTTCAG+AGG | 0.600463 | 1.1:+758771 | MS.gene27059:CDS |
| GTGAACAAAGGAGAAGATGA+AGG | 0.601999 | 1.1:-758292 | None:intergenic |
| TGCATCAATTGTTAGGAACA+CGG | 0.604743 | 1.1:+758450 | MS.gene27059:CDS |
| TGATTATGAAAGAGGCTGCA+AGG | 0.604953 | 1.1:+758390 | MS.gene27059:CDS |
| ACTCGCCTTTATTCAACTGG+AGG | 0.605047 | 1.1:+757299 | MS.gene27059:CDS |
| CTCAGTAGATATAATTGATG+AGG | 0.605508 | 1.1:+759820 | MS.gene27059:CDS |
| TTGAAAAGGATGCACGCAGT+GGG | 0.608477 | 1.1:+758991 | MS.gene27059:CDS |
| AGGCGACTGAAACCTGGCGG+TGG | 0.612279 | 1.1:+758163 | MS.gene27059:intron |
| GGTCGTGTCAAAACCATCAA+GGG | 0.613737 | 1.1:-758620 | None:intergenic |
| ATTTCGCCTTGGATATCACT+CGG | 0.615306 | 1.1:+759059 | MS.gene27059:CDS |
| GAGTTGCCCAAATTAAGTGA+AGG | 0.616122 | 1.1:+756681 | MS.gene27059:CDS |
| ATAGATGGAAATGCCAGAGT+CGG | 0.616187 | 1.1:-757071 | None:intergenic |
| TTGGTGTTGGCACGGAGTGG+AGG | 0.616958 | 1.1:+758925 | MS.gene27059:CDS |
| ACGCATAACCTCTTCACAGA+AGG | 0.623531 | 1.1:-755247 | None:intergenic |
| GAAGGTCAAGTACAACTGCA+TGG | 0.626377 | 1.1:-756554 | None:intergenic |
| AAATACACAGCTTAGCAGGA+AGG | 0.627877 | 1.1:-756572 | None:intergenic |
| CCACTGGAGAACCTTTCACA+TGG | 0.631497 | 1.1:+756777 | MS.gene27059:CDS |
| ACACCTTCTCTGGTGAACAA+AGG | 0.638418 | 1.1:-758304 | None:intergenic |
| GGGCATGAAGGAAATTTGCA+AGG | 0.641797 | 1.1:+756615 | MS.gene27059:CDS |
| CTGGGAAGTAGAGTCTCCAA+TGG | 0.644193 | 1.1:-756901 | None:intergenic |
| GTCCTTAGTTAAATCCAAAG+CGG | 0.648704 | 1.1:+757226 | MS.gene27059:CDS |
| GAAATCCACCTTCTGTGAAG+AGG | 0.649778 | 1.1:+755239 | MS.gene27059:CDS |
| CAGAGTACTCAAATAAGATG+GGG | 0.650521 | 1.1:+757156 | MS.gene27059:CDS |
| AAGCAAAGACTCTTTCACCT+GGG | 0.653354 | 1.1:+758248 | MS.gene27059:CDS |
| TCCAAGGACATGTATGACAT+GGG | 0.655879 | 1.1:-758329 | None:intergenic |
| ATTGAATGATATGTATCCTA+AGG | 0.657093 | 1.1:+758804 | MS.gene27059:CDS |
| ATTGAAAAGGATGCACGCAG+TGG | 0.665548 | 1.1:+758990 | MS.gene27059:CDS |
| AGACTCCAGTTCAGGACCTG+CGG | 0.667051 | 1.1:-758212 | None:intergenic |
| TTTCCAATTCAACCATGACA+AGG | 0.670098 | 1.1:+757106 | MS.gene27059:CDS |
| ATGGACCTCGACAACAACAA+AGG | 0.670502 | 1.1:+755057 | MS.gene27059:CDS |
| GGGAGCACAAAGAAGGCATG+GGG | 0.672205 | 1.1:+758694 | MS.gene27059:CDS |
| CAGAGCATAAAAGAACCGAT+GGG | 0.673943 | 1.1:+758674 | MS.gene27059:CDS |
| CCATGTGAAAGGTTCTCCAG+TGG | 0.675910 | 1.1:-756777 | None:intergenic |
| CTAATATGCGACTTTAAGCG+GGG | 0.687766 | 1.1:-759938 | None:intergenic |
| TGCATACCGAGTGATATCCA+AGG | 0.698263 | 1.1:-759065 | None:intergenic |
| TGCAGGCGACTGAAACCTGG+CGG | 0.712644 | 1.1:+758160 | MS.gene27059:intron |
| CATGAAGGAAATTTGCAAGG+TGG | 0.718134 | 1.1:+756618 | MS.gene27059:CDS |
| GCAATCTTAATAGAGAACAG+CGG | 0.774151 | 1.1:+756490 | MS.gene27059:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACAAAAACATAATAGAA+TGG | - | chr1.1:755576-755595 | None:intergenic | 15.0% |
| !! | TACATATATGTTAAAATTTC+TGG | + | chr1.1:759668-759687 | MS.gene27059:intron | 15.0% |
| !!! | AAGAAATAAGCTATTTTAAA+AGG | + | chr1.1:759313-759332 | MS.gene27059:intron | 15.0% |
| !!! | ATAGTTTTCAACTTAATTAA+TGG | - | chr1.1:755398-755417 | None:intergenic | 15.0% |
| !! | ATATAATGTACACAAAAAAG+AGG | - | chr1.1:759649-759668 | None:intergenic | 20.0% |
| !! | ATTGATACATATCAAAAACT+TGG | + | chr1.1:756753-756772 | MS.gene27059:CDS | 20.0% |
| !! | GGAATTTCATTATATTAGAT+TGG | - | chr1.1:756836-756855 | None:intergenic | 20.0% |
| !! | TATAATGAAATTCCTGAAAA+AGG | + | chr1.1:756842-756861 | MS.gene27059:CDS | 20.0% |
| !! | TATAATGTACACAAAAAAGA+GGG | - | chr1.1:759648-759667 | None:intergenic | 20.0% |
| !! | TTCTGAATCTTTACTAATAT+TGG | + | chr1.1:756345-756364 | MS.gene27059:intron | 20.0% |
| !! | TTGATACATATCAAAAACTT+GGG | + | chr1.1:756754-756773 | MS.gene27059:CDS | 20.0% |
| !!! | AATTAATTGATAATTCAGCA+TGG | + | chr1.1:759255-759274 | MS.gene27059:intron | 20.0% |
| !!! | AGGTTGAAAATTATTTTTTG+TGG | + | chr1.1:759196-759215 | MS.gene27059:intron | 20.0% |
| !!! | ATTAATTGCTCACTTTTTTT+CGG | + | chr1.1:759379-759398 | MS.gene27059:intron | 20.0% |
| !!! | CATTATATTAGATTGGATTT+TGG | - | chr1.1:756829-756848 | None:intergenic | 20.0% |
| !!! | GCTAACTTAAATTTGTTTTA+CGG | - | chr1.1:759158-759177 | None:intergenic | 20.0% |
| !!! | TCTGTAAACTAAAATTTTCA+TGG | + | chr1.1:759604-759623 | MS.gene27059:intron | 20.0% |
| !!! | TTTTTGCCTTTTCTTTTTAA+TGG | + | chr1.1:755362-755381 | MS.gene27059:intron | 20.0% |
| ! | AAAAAAGATGAATTCACCTT+AGG | - | chr1.1:758823-758842 | None:intergenic | 25.0% |
| ! | AATAAAACTCACAAAAACTG+AGG | - | chr1.1:756251-756270 | None:intergenic | 25.0% |
| ! | AGGGAATTCAAAAATTGTAT+TGG | - | chr1.1:757730-757749 | None:intergenic | 25.0% |
| ! | AGTATTTGTAGAATGATTTC+TGG | - | chr1.1:758539-758558 | None:intergenic | 25.0% |
| ! | ATTCACCAAGTGAAAAAAAT+AGG | - | chr1.1:759106-759125 | None:intergenic | 25.0% |
| ! | ATTGAATGATATGTATCCTA+AGG | + | chr1.1:758804-758823 | MS.gene27059:CDS | 25.0% |
| ! | CAGTTACCATTAAAAAGAAA+AGG | - | chr1.1:755371-755390 | None:intergenic | 25.0% |
| ! | GAAAAAAGCAAGAAATACAA+GGG | + | chr1.1:758595-758614 | MS.gene27059:CDS | 25.0% |
| ! | GAATTCAAAAATTGTATTGG+AGG | - | chr1.1:757727-757746 | None:intergenic | 25.0% |
| ! | TAAAGTAGTGTTTAATAGAC+AGG | - | chr1.1:755941-755960 | None:intergenic | 25.0% |
| ! | TAATCATTGTTCAGACAATT+TGG | - | chr1.1:758376-758395 | None:intergenic | 25.0% |
| ! | TACTTTCTTTCTATTGCTTT+AGG | + | chr1.1:756371-756390 | MS.gene27059:intron | 25.0% |
| ! | TCAAATGAAAAAACATTTGC+AGG | + | chr1.1:758143-758162 | MS.gene27059:intron | 25.0% |
| ! | TGAAAATATATTCTATCCCT+GGG | - | chr1.1:758057-758076 | None:intergenic | 25.0% |
| ! | TGGAAAAAATAGAGAACTTT+GGG | - | chr1.1:757803-757822 | None:intergenic | 25.0% |
| ! | TTAAAGCCTTCACTTAATTT+GGG | - | chr1.1:756690-756709 | None:intergenic | 25.0% |
| ! | TTTGGAAGTTTGTATTATGA+GGG | + | chr1.1:756190-756209 | MS.gene27059:intron | 25.0% |
| !! | AAACAAATTTAAGTTAGCTG+CGG | + | chr1.1:759160-759179 | MS.gene27059:intron | 25.0% |
| !! | GGATTTTTCTAATGTATACA+AGG | + | chr1.1:759334-759353 | MS.gene27059:intron | 25.0% |
| !! | TTTTCAACCTCAATTCAATT+TGG | - | chr1.1:759186-759205 | None:intergenic | 25.0% |
| !!! | CAGTTTTTGTGAGTTTTATT+AGG | + | chr1.1:756251-756270 | MS.gene27059:intron | 25.0% |
| !!! | GAAAATTATTTTTTGTGGCT+GGG | + | chr1.1:759201-759220 | MS.gene27059:intron | 25.0% |
| !!! | TGAAAATTATTTTTTGTGGC+TGG | + | chr1.1:759200-759219 | MS.gene27059:intron | 25.0% |
| AAACCTTGGAAAAAAGTCTT+TGG | + | chr1.1:758486-758505 | MS.gene27059:CDS | 30.0% | |
| AAATCTGCTGTTGAAATAGA+TGG | - | chr1.1:757089-757108 | None:intergenic | 30.0% | |
| AACTGCATGGATATCTATTT+GGG | - | chr1.1:756544-756563 | None:intergenic | 30.0% | |
| AATTATCTGTTTGCATGTGT+TGG | + | chr1.1:759407-759426 | MS.gene27059:intron | 30.0% | |
| ACATTTACATGTTATTAGCC+AGG | + | chr1.1:759730-759749 | MS.gene27059:CDS | 30.0% | |
| ACCAACTAAGATTACCAAAA+TGG | - | chr1.1:755205-755224 | None:intergenic | 30.0% | |
| AGCAGATATTATTGTTGAGA+AGG | + | chr1.1:757130-757149 | MS.gene27059:CDS | 30.0% | |
| ATCACATACGAAAAAGTGAT+AGG | - | chr1.1:757969-757988 | None:intergenic | 30.0% | |
| ATGAATATAGAGAGAGAATG+AGG | - | chr1.1:755100-755119 | None:intergenic | 30.0% | |
| ATGAGAATGAGAATGAATCA+TGG | + | chr1.1:755126-755145 | MS.gene27059:intron | 30.0% | |
| ATTTAAAGAGTCAAGCATGT+CGG | - | chr1.1:758859-758878 | None:intergenic | 30.0% | |
| CATAATTTCTCCTCATTTCA+GGG | - | chr1.1:757749-757768 | None:intergenic | 30.0% | |
| CCAACTAAGATTACCAAAAT+GGG | - | chr1.1:755204-755223 | None:intergenic | 30.0% | |
| CCAAGAGATTATTATAGTTG+CGG | - | chr1.1:756282-756301 | None:intergenic | 30.0% | |
| CTCAGTAGATATAATTGATG+AGG | + | chr1.1:759820-759839 | MS.gene27059:CDS | 30.0% | |
| CTGAAAATATATTCTATCCC+TGG | - | chr1.1:758058-758077 | None:intergenic | 30.0% | |
| CTGAACAATGATTATGAAAG+AGG | + | chr1.1:758382-758401 | MS.gene27059:CDS | 30.0% | |
| GAAGATCCTATGCAATTTAT+GGG | + | chr1.1:755800-755819 | MS.gene27059:intron | 30.0% | |
| GCATCTAAAGAAAATACCAT+TGG | + | chr1.1:756885-756904 | MS.gene27059:CDS | 30.0% | |
| GGAAAAAAGCAAGAAATACA+AGG | + | chr1.1:758594-758613 | MS.gene27059:CDS | 30.0% | |
| GTACATCAAAATGAAAACCT+TGG | + | chr1.1:758472-758491 | MS.gene27059:CDS | 30.0% | |
| GTATGAAAATATCCAAGATC+AGG | - | chr1.1:755767-755786 | None:intergenic | 30.0% | |
| GTGGAAAAAATAGAGAACTT+TGG | - | chr1.1:757804-757823 | None:intergenic | 30.0% | |
| GTTAAAGCCTTCACTTAATT+TGG | - | chr1.1:756691-756710 | None:intergenic | 30.0% | |
| GTTTGGAAGTTTGTATTATG+AGG | + | chr1.1:756189-756208 | MS.gene27059:intron | 30.0% | |
| TACTAATATGCGACTTTAAG+CGG | - | chr1.1:759943-759962 | None:intergenic | 30.0% | |
| TCAAAAATTGTATTGGAGGA+GGG | - | chr1.1:757723-757742 | None:intergenic | 30.0% | |
| TCATAATTTCTCCTCATTTC+AGG | - | chr1.1:757750-757769 | None:intergenic | 30.0% | |
| TTAGGGTCAAAAGATATAGA+AGG | + | chr1.1:756993-757012 | MS.gene27059:CDS | 30.0% | |
| TTCAAAAATTGTATTGGAGG+AGG | - | chr1.1:757724-757743 | None:intergenic | 30.0% | |
| ! | AACCGAATAACATTTTGTCA+GGG | + | chr1.1:756708-756727 | MS.gene27059:CDS | 30.0% |
| ! | AAGGTTTTGCATCAATTGTT+AGG | + | chr1.1:758443-758462 | MS.gene27059:CDS | 30.0% |
| ! | ACGATCGAGTTATTTCATAT+TGG | - | chr1.1:759438-759457 | None:intergenic | 30.0% |
| ! | ATTGATGAGGTATCTATTCA+TGG | + | chr1.1:759833-759852 | MS.gene27059:CDS | 30.0% |
| ! | ATTTGAAGAATAAGAAGCAC+TGG | + | chr1.1:759768-759787 | MS.gene27059:CDS | 30.0% |
| ! | CATTTTATCGAACAGGTAAA+AGG | - | chr1.1:755320-755339 | None:intergenic | 30.0% |
| ! | TAACCGAATAACATTTTGTC+AGG | + | chr1.1:756707-756726 | MS.gene27059:CDS | 30.0% |
| ! | TATATCTTTTGACCCTAACT+TGG | - | chr1.1:756991-757010 | None:intergenic | 30.0% |
| ! | TATGATATGCTGTGTGTTTT+AGG | + | chr1.1:757484-757503 | MS.gene27059:intron | 30.0% |
| ! | TTAATCTGTGTTGTTCTCTT+TGG | + | chr1.1:755499-755518 | MS.gene27059:intron | 30.0% |
| ! | TTTTCATACACGCCTATATT+TGG | + | chr1.1:755778-755797 | MS.gene27059:intron | 30.0% |
| ! | TTTTTGAATTCCCTGAAATG+AGG | + | chr1.1:757736-757755 | MS.gene27059:intron | 30.0% |
| !!! | AAGAGTCTTTGCTTTTTCTT+TGG | - | chr1.1:758242-758261 | None:intergenic | 30.0% |
| !!! | AATCATTTTTTCCAGAAGTC+TGG | - | chr1.1:756923-756942 | None:intergenic | 30.0% |
| !!! | ACAAAAACATGTTTTGGTGT+TGG | + | chr1.1:758912-758931 | MS.gene27059:CDS | 30.0% |
| !!! | ATCATTTTTTCCAGAAGTCT+GGG | - | chr1.1:756922-756941 | None:intergenic | 30.0% |
| !!! | CAAGACCTATTTTTTTCACT+TGG | + | chr1.1:759098-759117 | MS.gene27059:intron | 30.0% |
| !!! | CTTTGGTTTCACTTTTTCAT+TGG | + | chr1.1:755516-755535 | MS.gene27059:intron | 30.0% |
| !!! | GGTCAGATTTTTTAAAGCTT+CGG | + | chr1.1:756511-756530 | MS.gene27059:CDS | 30.0% |
| !!! | GTCAGATTTTTTAAAGCTTC+GGG | + | chr1.1:756512-756531 | MS.gene27059:CDS | 30.0% |
| !!! | TAAACCTGTCATTTTTCACA+TGG | + | chr1.1:758111-758130 | MS.gene27059:intron | 30.0% |
| !!! | TAGTTTTAACTCATTTCCCA+GGG | + | chr1.1:758038-758057 | MS.gene27059:intron | 30.0% |
| !!! | TCAGATTTTTTAAAGCTTCG+GGG | + | chr1.1:756513-756532 | MS.gene27059:CDS | 30.0% |
| !!! | TGTTTTTGGATTGAGGATAA+GGG | + | chr1.1:756119-756138 | MS.gene27059:intron | 30.0% |
| !!! | TTAGATTGGATTTTGGAATC+TGG | - | chr1.1:756822-756841 | None:intergenic | 30.0% |
| !!! | TTAGTTTTAACTCATTTCCC+AGG | + | chr1.1:758037-758056 | MS.gene27059:intron | 30.0% |
| AAATGTAGTTGTCGCATTGA+AGG | - | chr1.1:759716-759735 | None:intergenic | 35.0% | |
| AACATGGGTAAAGAACTTCT+GGG | - | chr1.1:757270-757289 | None:intergenic | 35.0% | |
| AAGAGAAACTTGATTGTGAC+AGG | - | chr1.1:757042-757061 | None:intergenic | 35.0% | |
| ACAGATAACACCTAAAAGCA+TGG | - | chr1.1:759589-759608 | None:intergenic | 35.0% | |
| ACTAATATGCGACTTTAAGC+GGG | - | chr1.1:759942-759961 | None:intergenic | 35.0% | |
| AGAACACCCATAAATTGCAT+AGG | - | chr1.1:755809-755828 | None:intergenic | 35.0% | |
| AGAATGAGGAAGGTTATAGA+AGG | - | chr1.1:755086-755105 | None:intergenic | 35.0% | |
| ATATAGAGAGAGAATGAGGA+AGG | - | chr1.1:755096-755115 | None:intergenic | 35.0% | |
| CAACTGCATGGATATCTATT+TGG | - | chr1.1:756545-756564 | None:intergenic | 35.0% | |
| CAATAAGCAAGCTTAAGCAT+TGG | - | chr1.1:758005-758024 | None:intergenic | 35.0% | |
| CACCCTGACAAAATGTTATT+CGG | - | chr1.1:756713-756732 | None:intergenic | 35.0% | |
| CCGCAACTATAATAATCTCT+TGG | + | chr1.1:756279-756298 | MS.gene27059:intron | 35.0% | |
| CTAACTATCTACTTCAGCAT+TGG | - | chr1.1:757407-757426 | None:intergenic | 35.0% | |
| GAAATTCCTGAAAAAGGTAG+AGG | + | chr1.1:756848-756867 | MS.gene27059:CDS | 35.0% | |
| GAAGTTTGTATTATGAGGGA+AGG | + | chr1.1:756194-756213 | MS.gene27059:intron | 35.0% | |
| GCAATCTTAATAGAGAACAG+CGG | + | chr1.1:756490-756509 | MS.gene27059:CDS | 35.0% | |
| GCATAGGATCTTCCAAATAT+AGG | - | chr1.1:755793-755812 | None:intergenic | 35.0% | |
| GCTTATGCATCACTATTTGA+AGG | + | chr1.1:758424-758443 | MS.gene27059:CDS | 35.0% | |
| GGAAGATCCTATGCAATTTA+TGG | + | chr1.1:755799-755818 | MS.gene27059:intron | 35.0% | |
| GGTCTTTGTGGATTCATATT+AGG | - | chr1.1:758355-758374 | None:intergenic | 35.0% | |
| GTACTATTGTTATGCTGAGA+AGG | + | chr1.1:759456-759475 | MS.gene27059:intron | 35.0% | |
| GTCCTTAGTTAAATCCAAAG+CGG | + | chr1.1:757226-757245 | MS.gene27059:CDS | 35.0% | |
| TCAGCATGGAAACAGTTAAA+AGG | + | chr1.1:759269-759288 | MS.gene27059:intron | 35.0% | |
| TCTACAAGTAGCTTAAGTCA+TGG | + | chr1.1:759483-759502 | MS.gene27059:intron | 35.0% | |
| TCTTTAGATGCAGTATCAAC+TGG | - | chr1.1:756876-756895 | None:intergenic | 35.0% | |
| TGAATTTCTCTATGCTTTGC+AGG | + | chr1.1:758888-758907 | MS.gene27059:intron | 35.0% | |
| TGCATCAATTGTTAGGAACA+CGG | + | chr1.1:758450-758469 | MS.gene27059:CDS | 35.0% | |
| TGCGATCAAATTCTAGACTA+AGG | + | chr1.1:757943-757962 | MS.gene27059:intron | 35.0% | |
| TTAACAGAAACCTCCTATTG+TGG | - | chr1.1:757911-757930 | None:intergenic | 35.0% | |
| TTTCAGGATGCATAGCTATT+AGG | - | chr1.1:758741-758760 | None:intergenic | 35.0% | |
| TTTCCAATTCAACCATGACA+AGG | + | chr1.1:757106-757125 | MS.gene27059:CDS | 35.0% | |
| TTTGGGTGGTAGGAAATATA+GGG | + | chr1.1:757540-757559 | MS.gene27059:intron | 35.0% | |
| TTTGTCCATATCTTTGCAGA+GGG | - | chr1.1:756946-756965 | None:intergenic | 35.0% | |
| ! | AAAATAGAGAACTTTGGGAG+AGG | - | chr1.1:757798-757817 | None:intergenic | 35.0% |
| ! | AAGTCATCCTTATGCTTTTC+AGG | - | chr1.1:758757-758776 | None:intergenic | 35.0% |
| ! | ATTTTTATGGGCATGCTTCT+AGG | + | chr1.1:759520-759539 | MS.gene27059:intron | 35.0% |
| ! | CAGAGTACTCAAATAAGATG+GGG | + | chr1.1:757156-757175 | MS.gene27059:CDS | 35.0% |
| ! | GATGTGCACTTTTACATTTG+TGG | - | chr1.1:759910-759929 | None:intergenic | 35.0% |
| ! | GCAGAGTACTCAAATAAGAT+GGG | + | chr1.1:757155-757174 | MS.gene27059:CDS | 35.0% |
| ! | TAAGGTTTGGTTGTTGTTGT+TGG | + | chr1.1:759563-759582 | MS.gene27059:intron | 35.0% |
| ! | TATGCATCCTGAAAAGCATA+AGG | + | chr1.1:758747-758766 | MS.gene27059:CDS | 35.0% |
| ! | TGCAGAGTACTCAAATAAGA+TGG | + | chr1.1:757154-757173 | MS.gene27059:CDS | 35.0% |
| ! | TTCAGACAATTTGGTCTTTG+TGG | - | chr1.1:758367-758386 | None:intergenic | 35.0% |
| ! | TTTTGTCCATATCTTTGCAG+AGG | - | chr1.1:756947-756966 | None:intergenic | 35.0% |
| !! | AATGTTTTGAGTCAAAGTCC+TGG | - | chr1.1:759751-759770 | None:intergenic | 35.0% |
| !! | CCCATTTTGGTAATCTTAGT+TGG | + | chr1.1:755201-755220 | MS.gene27059:CDS | 35.0% |
| !! | CTATTGCTTTAGGACACTAT+TGG | + | chr1.1:756381-756400 | MS.gene27059:intron | 35.0% |
| !! | CTTTAGGACACTATTGGAAA+CGG | + | chr1.1:756387-756406 | MS.gene27059:intron | 35.0% |
| !! | GAGGGTTTTTGAAAAAAGGA+AGG | - | chr1.1:757832-757851 | None:intergenic | 35.0% |
| !! | TCATTTTTCACATGGTCTCT+TGG | + | chr1.1:758119-758138 | MS.gene27059:intron | 35.0% |
| !! | TCTATTTCTAGTCTGCTTGA+GGG | + | chr1.1:756088-756107 | MS.gene27059:intron | 35.0% |
| !! | TGACTTGCTTGAAATTTCAG+AGG | + | chr1.1:758771-758790 | MS.gene27059:CDS | 35.0% |
| !! | TTCTATTTCTAGTCTGCTTG+AGG | + | chr1.1:756087-756106 | MS.gene27059:intron | 35.0% |
| !!! | ACTCCAAAGACTTTTTTCCA+AGG | - | chr1.1:758492-758511 | None:intergenic | 35.0% |
| !!! | GTGTGTTTTAGGCTTTGTTT+GGG | + | chr1.1:757495-757514 | MS.gene27059:intron | 35.0% |
| !!! | GTGTTTTTGGATTGAGGATA+AGG | + | chr1.1:756118-756137 | MS.gene27059:intron | 35.0% |
| !!! | TGTGTGTTTTAGGCTTTGTT+TGG | + | chr1.1:757494-757513 | MS.gene27059:intron | 35.0% |
| !!! | TTCTAGGTGTTTTTGGATTG+AGG | + | chr1.1:756112-756131 | MS.gene27059:intron | 35.0% |
| AAACCTTATCCCACTAAGTG+GGG | - | chr1.1:759551-759570 | None:intergenic | 40.0% | |
| AAACTCGCAAACAAAGCCTT+AGG | + | chr1.1:757858-757877 | MS.gene27059:intron | 40.0% | |
| AAAGCAAAGACTCTTTCACC+TGG | + | chr1.1:758247-758266 | MS.gene27059:CDS | 40.0% | |
| AAAGGAGAAGATGAAGGTAG+AGG | - | chr1.1:758289-758308 | None:intergenic | 40.0% | |
| AAATACAAGGGAACCCTTGA+TGG | + | chr1.1:758607-758626 | MS.gene27059:CDS | 40.0% | |
| AAATACACAGCTTAGCAGGA+AGG | - | chr1.1:756575-756594 | None:intergenic | 40.0% | |
| AAGCAAAGACTCTTTCACCT+GGG | + | chr1.1:758248-758267 | MS.gene27059:CDS | 40.0% | |
| AAGGAGAAGATGAAGGTAGA+GGG | - | chr1.1:758288-758307 | None:intergenic | 40.0% | |
| AATCTACCTGCTTTGATTGC+AGG | + | chr1.1:756316-756335 | MS.gene27059:intron | 40.0% | |
| AATGATCCTTAGAGTGTGCA+AGG | - | chr1.1:759362-759381 | None:intergenic | 40.0% | |
| ACTATTGGAAACGGTAAAGC+AGG | + | chr1.1:756396-756415 | MS.gene27059:CDS | 40.0% | |
| AGAACACGCATTAACTGCTT+AGG | - | chr1.1:756071-756090 | None:intergenic | 40.0% | |
| AGATCAGGATGAAGATCGAA+AGG | - | chr1.1:755752-755771 | None:intergenic | 40.0% | |
| AGTAAGAGAGATGCTGATCA+TGG | + | chr1.1:758568-758587 | MS.gene27059:CDS | 40.0% | |
| ATAACCCTGAGGTGAATCAA+GGG | + | chr1.1:755970-755989 | MS.gene27059:intron | 40.0% | |
| ATAGATGGAAATGCCAGAGT+CGG | - | chr1.1:757074-757093 | None:intergenic | 40.0% | |
| ATAGCCCTGTGTTGAATCAA+GGG | + | chr1.1:755692-755711 | MS.gene27059:intron | 40.0% | |
| ATAGTGATGCATAAGCATCC+TGG | - | chr1.1:758420-758439 | None:intergenic | 40.0% | |
| ATATCAAAAACTTGGGCCAC+TGG | + | chr1.1:756761-756780 | MS.gene27059:CDS | 40.0% | |
| ATCACTCGCCTTTATTCAAC+TGG | + | chr1.1:757296-757315 | MS.gene27059:CDS | 40.0% | |
| ATCGAACAGGTAAAAGGCAA+AGG | - | chr1.1:755314-755333 | None:intergenic | 40.0% | |
| ATTATGAGGGAAGGAAAGTG+AGG | + | chr1.1:756203-756222 | MS.gene27059:intron | 40.0% | |
| ATTCTTCATTCCCCACTTAG+TGG | + | chr1.1:756143-756162 | MS.gene27059:intron | 40.0% | |
| ATTTCGCCTTGGATATCACT+CGG | + | chr1.1:759059-759078 | MS.gene27059:CDS | 40.0% | |
| CAAACCTTATCCCACTAAGT+GGG | - | chr1.1:759552-759571 | None:intergenic | 40.0% | |
| CAACATGGGTAAAGAACTTC+TGG | - | chr1.1:757271-757290 | None:intergenic | 40.0% | |
| CAAGTCAACTAGAACAAGTC+TGG | - | chr1.1:757186-757205 | None:intergenic | 40.0% | |
| CAGAAGTTCTTTACCCATGT+TGG | + | chr1.1:757269-757288 | MS.gene27059:CDS | 40.0% | |
| CAGAGCATAAAAGAACCGAT+GGG | + | chr1.1:758674-758693 | MS.gene27059:CDS | 40.0% | |
| CATATAACATCGTGTGTTGC+GGG | + | chr1.1:755472-755491 | MS.gene27059:intron | 40.0% | |
| CATGAAGGAAATTTGCAAGG+TGG | + | chr1.1:756618-756637 | MS.gene27059:CDS | 40.0% | |
| CGCATGCTAATTCCAAGTTA+GGG | + | chr1.1:756976-756995 | MS.gene27059:CDS | 40.0% | |
| CTAATATGCGACTTTAAGCG+GGG | - | chr1.1:759941-759960 | None:intergenic | 40.0% | |
| CTCGATCTGTTAAACGATCT+GGG | + | chr1.1:756595-756614 | MS.gene27059:CDS | 40.0% | |
| CTTTGGGTGGTAGGAAATAT+AGG | + | chr1.1:757539-757558 | MS.gene27059:intron | 40.0% | |
| GAGACCATGTGAAAAATGAC+AGG | - | chr1.1:758118-758137 | None:intergenic | 40.0% | |
| GAGTTGCCCAAATTAAGTGA+AGG | + | chr1.1:756681-756700 | MS.gene27059:CDS | 40.0% | |
| GCAAACCTCCAGTTGAATAA+AGG | - | chr1.1:757307-757326 | None:intergenic | 40.0% | |
| GCATATAACATCGTGTGTTG+CGG | + | chr1.1:755471-755490 | MS.gene27059:intron | 40.0% | |
| GTGAACAAAGGAGAAGATGA+AGG | - | chr1.1:758295-758314 | None:intergenic | 40.0% | |
| GTGGATTCATATTAGGTCCA+AGG | - | chr1.1:758348-758367 | None:intergenic | 40.0% | |
| GTTCGATAAAATGCCTCACT+GGG | + | chr1.1:755327-755346 | MS.gene27059:intron | 40.0% | |
| TAATATCTGCTGCCTTGTCA+TGG | - | chr1.1:757121-757140 | None:intergenic | 40.0% | |
| TAGCTGTCTGATACCACAAT+AGG | + | chr1.1:757895-757914 | MS.gene27059:intron | 40.0% | |
| TCAGAGCATAAAAGAACCGA+TGG | + | chr1.1:758673-758692 | MS.gene27059:CDS | 40.0% | |
| TCCAAGGACATGTATGACAT+GGG | - | chr1.1:758332-758351 | None:intergenic | 40.0% | |
| TCTCGATCTGTTAAACGATC+TGG | + | chr1.1:756594-756613 | MS.gene27059:CDS | 40.0% | |
| TGAAAAAAGGAAGGAGCAAG+TGG | - | chr1.1:757823-757842 | None:intergenic | 40.0% | |
| TGATTATGAAAGAGGCTGCA+AGG | + | chr1.1:758390-758409 | MS.gene27059:CDS | 40.0% | |
| TGATTCCCTCTGCAAAGATA+TGG | + | chr1.1:756938-756957 | MS.gene27059:CDS | 40.0% | |
| TGTCCAAAATGAGCACCTTT+CGG | + | chr1.1:758966-758985 | MS.gene27059:CDS | 40.0% | |
| TGTTCGATAAAATGCCTCAC+TGG | + | chr1.1:755326-755345 | MS.gene27059:intron | 40.0% | |
| TTCACACATGCAGTTCTTTG+AGG | - | chr1.1:757450-757469 | None:intergenic | 40.0% | |
| TTCGATCTTCATCCTGATCT+TGG | + | chr1.1:755752-755771 | MS.gene27059:intron | 40.0% | |
| TTCTTCATTCCCCACTTAGT+GGG | + | chr1.1:756144-756163 | MS.gene27059:intron | 40.0% | |
| ! | AGCACCTTTCGGTATTGAAA+AGG | + | chr1.1:758977-758996 | MS.gene27059:CDS | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr1.1:757717-757736 | None:intergenic | 40.0% |
| ! | GCAGGCACAAAAACATGTTT+TGG | + | chr1.1:758906-758925 | MS.gene27059:intron | 40.0% |
| ! | GCATCCTTTTCAATACCGAA+AGG | - | chr1.1:758984-759003 | None:intergenic | 40.0% |
| ! | GGAAGAGTGTATTCATTGAC+AGG | + | chr1.1:756466-756485 | MS.gene27059:CDS | 40.0% |
| ! | TAGTGTGTTTGATAACCCTG+AGG | + | chr1.1:755959-755978 | MS.gene27059:intron | 40.0% |
| ! | TCTTGATGATATTCCGACTC+TGG | + | chr1.1:757058-757077 | MS.gene27059:CDS | 40.0% |
| !! | AGGGGAGGGTTTTTGAAAAA+AGG | - | chr1.1:757836-757855 | None:intergenic | 40.0% |
| !! | AGTGAGGCATTTTATCGAAC+AGG | - | chr1.1:755327-755346 | None:intergenic | 40.0% |
| !! | GCTTGGTTCTTGTTGTTGTT+TGG | + | chr1.1:756172-756191 | MS.gene27059:intron | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr1.1:757859-757878 | None:intergenic | 40.0% |
| !! | TACGGGTTCTAGAGATGAAA+AGG | + | chr1.1:758645-758664 | MS.gene27059:CDS | 40.0% |
| !! | TGCCGCTTTGGATTTAACTA+AGG | - | chr1.1:757231-757250 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr1.1:757502-757521 | MS.gene27059:intron | 40.0% |
| !! | TTCATCTCTAGAACCCGTAA+AGG | - | chr1.1:758644-758663 | None:intergenic | 40.0% |
| !! | TTGTTGTTGGCCATGCTTTT+AGG | + | chr1.1:759576-759595 | MS.gene27059:intron | 40.0% |
| !!! | AACATGTTTTGGTGTTGGCA+CGG | + | chr1.1:758917-758936 | MS.gene27059:CDS | 40.0% |
| !!! | ATACCGAAAGGTGCTCATTT+TGG | - | chr1.1:758972-758991 | None:intergenic | 40.0% |
| !!! | TCTAGTTTTAGTCTGCACGA+GGG | + | chr1.1:755826-755845 | MS.gene27059:intron | 40.0% |
| !!! | TGGTTTTGACACGACCTTTA+CGG | + | chr1.1:758627-758646 | MS.gene27059:CDS | 40.0% |
| !!! | TTCTAGTTTTAGTCTGCACG+AGG | + | chr1.1:755825-755844 | MS.gene27059:intron | 40.0% |
| AACCTTTCACATGGCTGCTT+CGG | + | chr1.1:756786-756805 | MS.gene27059:CDS | 45.0% | |
| AAGTACAGTGAAACCCAGTG+AGG | - | chr1.1:755343-755362 | None:intergenic | 45.0% | |
| ACACACCCTTGATTCAACAC+AGG | - | chr1.1:755700-755719 | None:intergenic | 45.0% | |
| ACACCTTCTCTGGTGAACAA+AGG | - | chr1.1:758307-758326 | None:intergenic | 45.0% | |
| ACCCATGTCATACATGTCCT+TGG | + | chr1.1:758328-758347 | MS.gene27059:CDS | 45.0% | |
| ACGCATAACCTCTTCACAGA+AGG | - | chr1.1:755250-755269 | None:intergenic | 45.0% | |
| ACTCGCCTTTATTCAACTGG+AGG | + | chr1.1:757299-757318 | MS.gene27059:CDS | 45.0% | |
| AGCTACTGTCTATGGAGTTG+AGG | + | chr1.1:759882-759901 | MS.gene27059:CDS | 45.0% | |
| AGGTCGTGTCAAAACCATCA+AGG | - | chr1.1:758624-758643 | None:intergenic | 45.0% | |
| ATGCTCTAGCTGCACTACTT+AGG | - | chr1.1:756437-756456 | None:intergenic | 45.0% | |
| ATGGACCTCGACAACAACAA+AGG | + | chr1.1:755057-755076 | MS.gene27059:CDS | 45.0% | |
| ATTCCCCACTTAGTGGGAAA+AGG | + | chr1.1:756150-756169 | MS.gene27059:intron | 45.0% | |
| ATTGAAAAGGATGCACGCAG+TGG | + | chr1.1:758990-759009 | MS.gene27059:CDS | 45.0% | |
| CACACCCTTGATTCAACACA+GGG | - | chr1.1:755699-755718 | None:intergenic | 45.0% | |
| CATAACCTCTTCACAGAAGG+TGG | - | chr1.1:755247-755266 | None:intergenic | 45.0% | |
| CCAAACCTTATCCCACTAAG+TGG | - | chr1.1:759553-759572 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGGTT+TGG | + | chr1.1:759550-759569 | MS.gene27059:intron | 45.0% | |
| CCTGCTTACCTACTCGAAAA+CGG | + | chr1.1:759980-759999 | MS.gene27059:CDS | 45.0% | |
| CGAGAAATACACAGCTTAGC+AGG | - | chr1.1:756579-756598 | None:intergenic | 45.0% | |
| CTGCCTTGTCATGGTTGAAT+TGG | - | chr1.1:757112-757131 | None:intergenic | 45.0% | |
| CTGCTTACCTACTCGAAAAC+GGG | + | chr1.1:759981-760000 | MS.gene27059:CDS | 45.0% | |
| CTGTCTGATACCACAATAGG+AGG | + | chr1.1:757898-757917 | MS.gene27059:intron | 45.0% | |
| GAAATCCACCTTCTGTGAAG+AGG | + | chr1.1:755239-755258 | MS.gene27059:CDS | 45.0% | |
| GAAGGTCAAGTACAACTGCA+TGG | - | chr1.1:756557-756576 | None:intergenic | 45.0% | |
| GACTTTAAGCGGGGTATGTT+TGG | - | chr1.1:759932-759951 | None:intergenic | 45.0% | |
| GAGAGATGCTGATCATGGAT+TGG | + | chr1.1:758573-758592 | MS.gene27059:CDS | 45.0% | |
| GATAACCCTGAGGTGAATCA+AGG | + | chr1.1:755969-755988 | MS.gene27059:intron | 45.0% | |
| GATAGCCCTGTGTTGAATCA+AGG | + | chr1.1:755691-755710 | MS.gene27059:intron | 45.0% | |
| GCGCATGCTAATTCCAAGTT+AGG | + | chr1.1:756975-756994 | MS.gene27059:CDS | 45.0% | |
| GGGCATGAAGGAAATTTGCA+AGG | + | chr1.1:756615-756634 | MS.gene27059:CDS | 45.0% | |
| GGTCAGACTGATAAATCTGC+TGG | + | chr1.1:757014-757033 | MS.gene27059:CDS | 45.0% | |
| GGTCGTGTCAAAACCATCAA+GGG | - | chr1.1:758623-758642 | None:intergenic | 45.0% | |
| GTCCAAGGACATGTATGACA+TGG | - | chr1.1:758333-758352 | None:intergenic | 45.0% | |
| GTTAAACGATCTGGGCATGA+AGG | + | chr1.1:756603-756622 | MS.gene27059:CDS | 45.0% | |
| TAACCCTGAGGTGAATCAAG+GGG | + | chr1.1:755971-755990 | MS.gene27059:intron | 45.0% | |
| TAGCGATCGAGGAAATCCTA+AGG | - | chr1.1:757877-757896 | None:intergenic | 45.0% | |
| TCATTGCAAATGCTGCGAAC+TGG | + | chr1.1:757336-757355 | MS.gene27059:CDS | 45.0% | |
| TCGAGTAGGTAAGCAGGAAA+GGG | - | chr1.1:759977-759996 | None:intergenic | 45.0% | |
| TCTCCTTTGTTCACCAGAGA+AGG | + | chr1.1:758301-758320 | MS.gene27059:CDS | 45.0% | |
| TCTTCACTGGTATTTCGCCT+TGG | + | chr1.1:759048-759067 | MS.gene27059:CDS | 45.0% | |
| TGACGACAAGCTACTGTCTA+TGG | + | chr1.1:759874-759893 | MS.gene27059:CDS | 45.0% | |
| TGCATACCGAGTGATATCCA+AGG | - | chr1.1:759068-759087 | None:intergenic | 45.0% | |
| TGGAATTAGCATGCGCTGTT+GGG | - | chr1.1:756971-756990 | None:intergenic | 45.0% | |
| TTCGAGTAGGTAAGCAGGAA+AGG | - | chr1.1:759978-759997 | None:intergenic | 45.0% | |
| TTGAAAAGGATGCACGCAGT+GGG | + | chr1.1:758991-759010 | MS.gene27059:CDS | 45.0% | |
| TTGGAATTAGCATGCGCTGT+TGG | - | chr1.1:756972-756991 | None:intergenic | 45.0% | |
| ! | AAAGAAGGCATGGGGATCAT+GGG | + | chr1.1:758702-758721 | MS.gene27059:CDS | 45.0% |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr1.1:756156-756175 | None:intergenic | 45.0% |
| ! | AAGGTACCTTGCACACTCTA+AGG | + | chr1.1:759353-759372 | MS.gene27059:intron | 45.0% |
| ! | ATAGAGAACTTTGGGAGAGG+AGG | - | chr1.1:757795-757814 | None:intergenic | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr1.1:756157-756176 | None:intergenic | 45.0% |
| ! | CGCAGATGCAAAACCCATTT+TGG | + | chr1.1:755188-755207 | MS.gene27059:intron | 45.0% |
| ! | CTGGTACCTCTACCTTTTTC+AGG | - | chr1.1:756857-756876 | None:intergenic | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr1.1:757854-757873 | None:intergenic | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr1.1:757507-757526 | MS.gene27059:intron | 45.0% |
| ! | GCACGCAGTGGGTTTAAAAT+GGG | + | chr1.1:759002-759021 | MS.gene27059:CDS | 45.0% |
| ! | GCATCAATTTTTGATGCCGC+AGG | + | chr1.1:758196-758215 | MS.gene27059:CDS | 45.0% |
| ! | GCTCATTTTGGACATCTGAC+AGG | - | chr1.1:758960-758979 | None:intergenic | 45.0% |
| ! | GTAATCTTAGTTGGTGCACC+TGG | + | chr1.1:755210-755229 | MS.gene27059:CDS | 45.0% |
| ! | TAGAGAACTTTGGGAGAGGA+GGG | - | chr1.1:757794-757813 | None:intergenic | 45.0% |
| ! | TGAGGGCTTCTAGGTGTTTT+TGG | + | chr1.1:756105-756124 | MS.gene27059:intron | 45.0% |
| ! | TGCACGCAGTGGGTTTAAAA+TGG | + | chr1.1:759001-759020 | MS.gene27059:CDS | 45.0% |
| !! | CAGCTAGAGCATTGAAGGAT+GGG | + | chr1.1:756445-756464 | MS.gene27059:CDS | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr1.1:757855-757874 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr1.1:757506-757525 | MS.gene27059:intron | 45.0% |
| !! | GGAAACCTTTGTTGTTGTCG+AGG | - | chr1.1:755065-755084 | None:intergenic | 45.0% |
| !! | GGTTTTGACACGACCTTTAC+GGG | + | chr1.1:758628-758647 | MS.gene27059:CDS | 45.0% |
| !! | TAGTGCAGCTAGAGCATTGA+AGG | + | chr1.1:756440-756459 | MS.gene27059:CDS | 45.0% |
| !!! | AGGAGGGTTTTGGAAGGTTT+TGG | - | chr1.1:757707-757726 | None:intergenic | 45.0% |
| !!! | AGGGTTTTGGAAGGTTTTGG+AGG | - | chr1.1:757704-757723 | None:intergenic | 45.0% |
| !!! | GGGTTTTGGAAGGTTTTGGA+GGG | - | chr1.1:757703-757722 | None:intergenic | 45.0% |
| !!! | TATTGGAGGAGGGTTTTGGA+AGG | - | chr1.1:757713-757732 | None:intergenic | 45.0% |
| !!! | AAGTTTTTTTTAATTTTTAT+GGG | + | chr1.1:759508-759527 | MS.gene27059:intron | 5.0% |
| !!! | TAAGTTTTTTTTAATTTTTA+TGG | + | chr1.1:759507-759526 | MS.gene27059:intron | 5.0% |
| !!! | TTTTTTTTTAATAATGTTTT+CGG | + | chr1.1:758084-758103 | MS.gene27059:intron | 5.0% |
| ACACCCCTTGATTCACCTCA+GGG | - | chr1.1:755977-755996 | None:intergenic | 50.0% | |
| ATTTGCAGGCGACTGAAACC+TGG | + | chr1.1:758157-758176 | MS.gene27059:intron | 50.0% | |
| CCACTGGAGAACCTTTCACA+TGG | + | chr1.1:756777-756796 | MS.gene27059:CDS | 50.0% | |
| CCACTTAGTGGGAAAAGGCT+TGG | + | chr1.1:756155-756174 | MS.gene27059:intron | 50.0% | |
| CCATGTGAAAGGTTCTCCAG+TGG | - | chr1.1:756780-756799 | None:intergenic | 50.0% | |
| CTACCTGCTTTGATTGCAGG+AGG | + | chr1.1:756319-756338 | MS.gene27059:intron | 50.0% | |
| CTGGGAAGTAGAGTCTCCAA+TGG | - | chr1.1:756904-756923 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.1:759547-759566 | None:intergenic | 50.0% | |
| GACTCTACTTCCCAGACTTC+TGG | + | chr1.1:756909-756928 | MS.gene27059:CDS | 50.0% | |
| GCGAGTGATGTCTCCAACAT+GGG | - | chr1.1:757285-757304 | None:intergenic | 50.0% | |
| GCTGCGGCCAAATTGAATTG+AGG | + | chr1.1:759176-759195 | MS.gene27059:intron | 50.0% | |
| TAGTCTGCTTGAGGGCTTCT+AGG | + | chr1.1:756096-756115 | MS.gene27059:intron | 50.0% | |
| TATCAGACAGCTAGCGATCG+AGG | - | chr1.1:757888-757907 | None:intergenic | 50.0% | |
| TGCCTTCTTTGTGCTCCCAT+CGG | - | chr1.1:758692-758711 | None:intergenic | 50.0% | |
| TGGACATGTCTACGTTCTGC+AGG | + | chr1.1:759688-759707 | MS.gene27059:intron | 50.0% | |
| TTAGTCTGCACGAGGGCTTT+AGG | + | chr1.1:755833-755852 | MS.gene27059:intron | 50.0% | |
| TTGGTTGCAGACTCCAGTTC+AGG | - | chr1.1:758223-758242 | None:intergenic | 50.0% | |
| ! | AACCGATGGGAGCACAAAGA+AGG | + | chr1.1:758687-758706 | MS.gene27059:CDS | 50.0% |
| ! | ATGGGAGCACAAAGAAGGCA+TGG | + | chr1.1:758692-758711 | MS.gene27059:CDS | 50.0% |
| ! | CAAAGAAGGCATGGGGATCA+TGG | + | chr1.1:758701-758720 | MS.gene27059:CDS | 50.0% |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr1.1:756158-756177 | None:intergenic | 50.0% |
| ! | TGGGAGCACAAAGAAGGCAT+GGG | + | chr1.1:758693-758712 | MS.gene27059:CDS | 50.0% |
| ! | TTAGTTGGTGCACCTGGAAG+CGG | + | chr1.1:755216-755235 | MS.gene27059:CDS | 50.0% |
| !! | GACGTTCTTTTCTGCCGCTT+TGG | - | chr1.1:757243-757262 | None:intergenic | 50.0% |
| !! | GCAGCTAGAGCATTGAAGGA+TGG | + | chr1.1:756444-756463 | MS.gene27059:CDS | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr1.1:757856-757875 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr1.1:757505-757524 | MS.gene27059:intron | 50.0% |
| !!! | CCGTTTTCGAGTAGGTAAGC+AGG | - | chr1.1:759983-760002 | None:intergenic | 50.0% |
| AACCTGACAAACGCGAACCC+AGG | - | chr1.1:755286-755305 | None:intergenic | 55.0% | |
| AAGAGGCTGCAAGGTTCTCC+AGG | + | chr1.1:758399-758418 | MS.gene27059:CDS | 55.0% | |
| AGACTCCAGTTCAGGACCTG+CGG | - | chr1.1:758215-758234 | None:intergenic | 55.0% | |
| CACACCCCTTGATTCACCTC+AGG | - | chr1.1:755978-755997 | None:intergenic | 55.0% | |
| CCACCTCCTGCAATCAAAGC+AGG | - | chr1.1:756325-756344 | None:intergenic | 55.0% | |
| CCTACTCGAAAACGGGCGTT+TGG | + | chr1.1:759988-760007 | MS.gene27059:CDS | 55.0% | |
| CCTGCTTTGATTGCAGGAGG+TGG | + | chr1.1:756322-756341 | MS.gene27059:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.1:759545-759564 | MS.gene27059:intron | 55.0% | |
| CTCGAAAACGGGCGTTTGGT+TGG | + | chr1.1:759992-760011 | MS.gene27059:CDS | 55.0% | |
| GACATGGGTCACACCTTCTC+TGG | - | chr1.1:758317-758336 | None:intergenic | 55.0% | |
| GACCGAAGCAGCCATGTGAA+AGG | - | chr1.1:756791-756810 | None:intergenic | 55.0% | |
| GGCGAGTGATGTCTCCAACA+TGG | - | chr1.1:757286-757305 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | - | chr1.1:757850-757869 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | + | chr1.1:757511-757530 | MS.gene27059:intron | 55.0% | |
| TAGGTCCGACCCCACTTAGT+GGG | + | chr1.1:759539-759558 | MS.gene27059:intron | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | - | chr1.1:757851-757870 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr1.1:757510-757529 | MS.gene27059:intron | 55.0% | |
| TTTGGGAGAGGAGGGCTTTG+GGG | - | chr1.1:757786-757805 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | + | chr1.1:757512-757531 | MS.gene27059:intron | 55.0% | |
| ! | AAGGTGGATTTCCCGCTTCC+AGG | - | chr1.1:755231-755250 | None:intergenic | 55.0% |
| ! | ACTTTGGGAGAGGAGGGCTT+TGG | - | chr1.1:757788-757807 | None:intergenic | 55.0% |
| ! | CTTTGGGAGAGGAGGGCTTT+GGG | - | chr1.1:757787-757806 | None:intergenic | 55.0% |
| ! | GGGAGCACAAAGAAGGCATG+GGG | + | chr1.1:758694-758713 | MS.gene27059:CDS | 55.0% |
| ! | TAGTTGGTGCACCTGGAAGC+GGG | + | chr1.1:755217-755236 | MS.gene27059:CDS | 55.0% |
| !!! | CCAAACGCCCGTTTTCGAGT+AGG | - | chr1.1:759991-760010 | None:intergenic | 55.0% |
| !!! | GTTTTGGTGTTGGCACGGAG+TGG | + | chr1.1:758922-758941 | MS.gene27059:CDS | 55.0% |
| CACCTGGGTTCGCGTTTGTC+AGG | + | chr1.1:755281-755300 | MS.gene27059:CDS | 60.0% | |
| CTAGGTCCGACCCCACTTAG+TGG | + | chr1.1:759538-759557 | MS.gene27059:intron | 60.0% | |
| GCGTTCCTCTTCTCGCACCT+GGG | + | chr1.1:755266-755285 | MS.gene27059:CDS | 60.0% | |
| GGGACGACAACAGCATTCCC+AGG | - | chr1.1:758268-758287 | None:intergenic | 60.0% | |
| TGATGCCGCAGGTCCTGAAC+TGG | + | chr1.1:758207-758226 | MS.gene27059:CDS | 60.0% | |
| TGCAGGCGACTGAAACCTGG+CGG | + | chr1.1:758160-758179 | MS.gene27059:intron | 60.0% | |
| TGCGTTCCTCTTCTCGCACC+TGG | + | chr1.1:755265-755284 | MS.gene27059:CDS | 60.0% | |
| ! | TTGGGAGAGGAGGGCTTTGG+GGG | - | chr1.1:757785-757804 | None:intergenic | 60.0% |
| !! | TTGGTGTTGGCACGGAGTGG+AGG | + | chr1.1:758925-758944 | MS.gene27059:CDS | 60.0% |
| AGGCGACTGAAACCTGGCGG+TGG | + | chr1.1:758163-758182 | MS.gene27059:intron | 65.0% | |
| CGACTGAAACCTGGCGGTGG+AGG | + | chr1.1:758166-758185 | MS.gene27059:CDS | 65.0% | |
| GCGAACCCAGGTGCGAGAAG+AGG | - | chr1.1:755274-755293 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | + | chr1.1:757516-757535 | MS.gene27059:intron | 65.0% | |
| ! | GCATTGACACCTCCACCGCC+AGG | - | chr1.1:758178-758197 | None:intergenic | 65.0% |
| !! | AGGGGAGGGCTTTGGGTGGT+AGG | + | chr1.1:757530-757549 | MS.gene27059:intron | 65.0% |
| !! | TGGGAGAGGAGGGCTTTGGG+GGG | - | chr1.1:757784-757803 | None:intergenic | 65.0% |
| GGAGGGGAGGGGAGGGCTTT+GGG | + | chr1.1:757523-757542 | MS.gene27059:intron | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | + | chr1.1:757515-757534 | MS.gene27059:intron | 70.0% | |
| TGGAGGGGAGGGGAGGGCTT+TGG | + | chr1.1:757522-757541 | MS.gene27059:intron | 70.0% | |
| !! | GGGGAGGGGAGGGCTTTGGG+TGG | + | chr1.1:757526-757545 | MS.gene27059:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 755045 | 760030 | 755045 | ID=MS.gene27059 |
| chr1.1 | mRNA | 755045 | 760030 | 755045 | ID=MS.gene27059.t1;Parent=MS.gene27059 |
| chr1.1 | exon | 755045 | 755078 | 755045 | ID=MS.gene27059.t1.exon1;Parent=MS.gene27059.t1 |
| chr1.1 | CDS | 755045 | 755078 | 755045 | ID=cds.MS.gene27059.t1;Parent=MS.gene27059.t1 |
| chr1.1 | exon | 755193 | 755302 | 755193 | ID=MS.gene27059.t1.exon2;Parent=MS.gene27059.t1 |
| chr1.1 | CDS | 755193 | 755302 | 755193 | ID=cds.MS.gene27059.t1;Parent=MS.gene27059.t1 |
| chr1.1 | exon | 756393 | 757357 | 756393 | ID=MS.gene27059.t1.exon3;Parent=MS.gene27059.t1 |
| chr1.1 | CDS | 756393 | 757357 | 756393 | ID=cds.MS.gene27059.t1;Parent=MS.gene27059.t1 |
| chr1.1 | exon | 758165 | 758825 | 758165 | ID=MS.gene27059.t1.exon4;Parent=MS.gene27059.t1 |
| chr1.1 | CDS | 758165 | 758825 | 758165 | ID=cds.MS.gene27059.t1;Parent=MS.gene27059.t1 |
| chr1.1 | exon | 758910 | 759080 | 758910 | ID=MS.gene27059.t1.exon5;Parent=MS.gene27059.t1 |
| chr1.1 | CDS | 758910 | 759080 | 758910 | ID=cds.MS.gene27059.t1;Parent=MS.gene27059.t1 |
| chr1.1 | exon | 759710 | 760030 | 759710 | ID=MS.gene27059.t1.exon6;Parent=MS.gene27059.t1 |
| chr1.1 | CDS | 759710 | 760030 | 759710 | ID=cds.MS.gene27059.t1;Parent=MS.gene27059.t1 |
| Gene Sequence |
| Protein sequence |
