Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31674.t1 | XP_003588445.2 | 98.8 | 502 | 5 | 1 | 14 | 515 | 74 | 574 | 1.50E-277 | 964.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31674.t1 | Q8L5Z4 | 74.4 | 500 | 127 | 1 | 16 | 515 | 86 | 584 | 1.7e-213 | 743.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31674.t1 | G7I278 | 98.8 | 502 | 5 | 1 | 14 | 515 | 74 | 574 | 1.1e-277 | 964.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene31674 | 0.805597 | 1.24E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene31674 | 0.809684 | 1.68E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene31674 | 0.825949 | 3.55E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene31674 | 0.829852 | 4.08E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene31674 | 0.823172 | 1.60E-53 | -1.69E-46 |
| MS.gene049389 | MS.gene31674 | 0.83622 | 1.06E-56 | -1.69E-46 |
| MS.gene049427 | MS.gene31674 | 0.859669 | 3.53E-63 | -1.69E-46 |
| MS.gene049491 | MS.gene31674 | 0.825551 | 4.41E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene31674 | 0.815167 | 1.06E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene31674 | 0.81683 | 4.52E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene31674 | 0.828893 | 6.98E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene31674 | 0.822583 | 2.19E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene31674 | 0.80508 | 1.59E-49 | -1.69E-46 |
| MS.gene050099 | MS.gene31674 | 0.816692 | 4.85E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene31674 | 0.807966 | 3.90E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene31674 | 0.875357 | 3.29E-68 | -1.69E-46 |
| MS.gene050397 | MS.gene31674 | 0.820761 | 5.78E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene31674 | 0.80604 | 9.98E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene31674 | 0.829056 | 6.37E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene31674 | 0.857939 | 1.16E-62 | -1.69E-46 |
| MS.gene050529 | MS.gene31674 | 0.867305 | 1.51E-65 | -1.69E-46 |
| MS.gene050593 | MS.gene31674 | 0.826961 | 2.03E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene31674 | 0.873905 | 1.02E-67 | -1.69E-46 |
| MS.gene050767 | MS.gene31674 | 0.800638 | 1.31E-48 | -1.69E-46 |
| MS.gene050770 | MS.gene31674 | 0.805472 | 1.31E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene31674 | 0.877937 | 4.21E-69 | -1.69E-46 |
| MS.gene05101 | MS.gene31674 | 0.831208 | 1.90E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene31674 | 0.864014 | 1.65E-64 | -1.69E-46 |
| MS.gene051387 | MS.gene31674 | 0.841488 | 4.61E-58 | -1.69E-46 |
| MS.gene051471 | MS.gene31674 | 0.841366 | 4.96E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene31674 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene31674 | 0.810104 | 1.36E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene31674 | 0.825438 | 4.69E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene31674 | 0.841396 | 4.87E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene31674 | 0.807201 | 5.67E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene31674 | 0.917388 | 5.64E-86 | -1.69E-46 |
| MS.gene052253 | MS.gene31674 | 0.839795 | 1.28E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene31674 | 0.900333 | 8.14E-78 | -1.69E-46 |
| MS.gene052326 | MS.gene31674 | 0.811643 | 6.32E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene31674 | 0.876605 | 1.22E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene31674 | 0.824584 | 7.46E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene31674 | 0.826522 | 2.59E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene31674 | 0.83217 | 1.10E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene31674 | 0.853141 | 2.91E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene31674 | 0.825719 | 4.02E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene31674 | 0.814515 | 1.48E-51 | -1.69E-46 |
| MS.gene053107 | MS.gene31674 | 0.806768 | 7.01E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene31674 | 0.812325 | 4.49E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene31674 | 0.825793 | 3.86E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene31674 | 0.830914 | 2.25E-55 | -1.69E-46 |
| MS.gene053384 | MS.gene31674 | 0.807133 | 5.87E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene31674 | 0.819907 | 9.08E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene31674 | 0.853748 | 1.95E-61 | -1.69E-46 |
| MS.gene053559 | MS.gene31674 | 0.809785 | 1.59E-50 | -1.69E-46 |
| MS.gene053579 | MS.gene31674 | 0.802845 | 4.62E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene31674 | 0.827119 | 1.87E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene31674 | 0.82747 | 1.54E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene31674 | 0.812696 | 3.72E-51 | -1.69E-46 |
| MS.gene053928 | MS.gene31674 | 0.817091 | 3.95E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene31674 | 0.875943 | 2.07E-68 | -1.69E-46 |
| MS.gene054349 | MS.gene31674 | 0.804438 | 2.16E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene31674 | 0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene31674 | 0.828986 | 6.63E-55 | -1.69E-46 |
| MS.gene054802 | MS.gene31674 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene054804 | MS.gene31674 | 0.80193 | 7.14E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene31674 | 0.862815 | 3.88E-64 | -1.69E-46 |
| MS.gene05505 | MS.gene31674 | 0.813388 | 2.63E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene31674 | 0.850941 | 1.23E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene31674 | 0.830636 | 2.63E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene31674 | 0.840276 | 9.58E-58 | -1.69E-46 |
| MS.gene055397 | MS.gene31674 | 0.820548 | 6.47E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene31674 | 0.832169 | 1.10E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene31674 | 0.852834 | 3.56E-61 | -1.69E-46 |
| MS.gene055539 | MS.gene31674 | 0.815583 | 8.58E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene31674 | 0.834553 | 2.80E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene31674 | 0.805413 | 1.35E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene31674 | 0.805368 | 1.38E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene31674 | 0.874887 | 4.75E-68 | -1.69E-46 |
| MS.gene056410 | MS.gene31674 | 0.832707 | 8.11E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene31674 | 0.850216 | 1.96E-60 | -1.69E-46 |
| MS.gene056609 | MS.gene31674 | 0.863962 | 1.71E-64 | -1.69E-46 |
| MS.gene056612 | MS.gene31674 | 0.837704 | 4.44E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene31674 | 0.839288 | 1.73E-57 | -1.69E-46 |
| MS.gene056719 | MS.gene31674 | 0.804575 | 2.02E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene31674 | 0.838288 | 3.14E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene31674 | 0.833153 | 6.28E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene31674 | 0.85147 | 8.69E-61 | -1.69E-46 |
| MS.gene05702 | MS.gene31674 | 0.808089 | 3.68E-50 | -1.69E-46 |
| MS.gene057121 | MS.gene31674 | 0.80874 | 2.67E-50 | -1.69E-46 |
| MS.gene057123 | MS.gene31674 | 0.819104 | 1.38E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene31674 | 0.841189 | 5.53E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene31674 | 0.809393 | 1.93E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene31674 | 0.846475 | 2.12E-59 | -1.69E-46 |
| MS.gene05735 | MS.gene31674 | 0.843927 | 1.04E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene31674 | 0.818904 | 1.54E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene31674 | 0.864245 | 1.40E-64 | -1.69E-46 |
| MS.gene057449 | MS.gene31674 | 0.860915 | 1.48E-63 | -1.69E-46 |
| MS.gene057450 | MS.gene31674 | 0.871885 | 4.86E-67 | -1.69E-46 |
| MS.gene057537 | MS.gene31674 | 0.821432 | 4.05E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene31674 | 0.821176 | 4.64E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene31674 | 0.831204 | 1.91E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene31674 | 0.829605 | 4.69E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene31674 | 0.855692 | 5.32E-62 | -1.69E-46 |
| MS.gene058007 | MS.gene31674 | 0.8361 | 1.14E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene31674 | 0.816073 | 6.67E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene31674 | 0.847953 | 8.34E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene31674 | 0.857733 | 1.33E-62 | -1.69E-46 |
| MS.gene058142 | MS.gene31674 | 0.816662 | 4.93E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene31674 | 0.813771 | 2.16E-51 | -1.69E-46 |
| MS.gene058276 | MS.gene31674 | 0.810796 | 9.65E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene31674 | 0.875032 | 4.24E-68 | -1.69E-46 |
| MS.gene058365 | MS.gene31674 | 0.836295 | 1.02E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene31674 | 0.881984 | 1.52E-70 | -1.69E-46 |
| MS.gene058700 | MS.gene31674 | 0.840388 | 8.96E-58 | -1.69E-46 |
| MS.gene058787 | MS.gene31674 | 0.808992 | 2.36E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene31674 | 0.811094 | 8.31E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene31674 | 0.814464 | 1.52E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene31674 | 0.863281 | 2.79E-64 | -1.69E-46 |
| MS.gene058993 | MS.gene31674 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene31674 | 0.88112 | 3.12E-70 | -1.69E-46 |
| MS.gene059141 | MS.gene31674 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene059326 | MS.gene31674 | 0.813382 | 2.63E-51 | -1.69E-46 |
| MS.gene059342 | MS.gene31674 | 0.823489 | 1.35E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene31674 | 0.816155 | 6.40E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene31674 | 0.851212 | 1.03E-60 | -1.69E-46 |
| MS.gene059420 | MS.gene31674 | 0.813698 | 2.24E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene31674 | 0.858472 | 8.05E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene31674 | 0.872592 | 2.83E-67 | -1.69E-46 |
| MS.gene05959 | MS.gene31674 | 0.85237 | 4.83E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene31674 | 0.914726 | 1.37E-84 | -1.69E-46 |
| MS.gene059688 | MS.gene31674 | 0.881909 | 1.62E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene31674 | 0.878264 | 3.23E-69 | -1.69E-46 |
| MS.gene059695 | MS.gene31674 | 0.877022 | 8.77E-69 | -1.69E-46 |
| MS.gene059708 | MS.gene31674 | 0.831745 | 1.40E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene31674 | 0.800585 | 1.35E-48 | -1.69E-46 |
| MS.gene059807 | MS.gene31674 | 0.821532 | 3.84E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene31674 | 0.845999 | 2.86E-59 | -1.69E-46 |
| MS.gene05986 | MS.gene31674 | 0.817063 | 4.01E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene31674 | 0.852719 | 3.84E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene31674 | 0.874161 | 8.38E-68 | -1.69E-46 |
| MS.gene060193 | MS.gene31674 | 0.816472 | 5.43E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene31674 | 0.818944 | 1.51E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene31674 | 0.856443 | 3.21E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene31674 | 0.825584 | 4.33E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene31674 | 0.847355 | 1.22E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene31674 | 0.818016 | 2.44E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene31674 | 0.829963 | 3.84E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene31674 | 0.839621 | 1.42E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene31674 | 0.849106 | 4.00E-60 | -1.69E-46 |
| MS.gene061051 | MS.gene31674 | -0.882318 | 1.15E-70 | -1.69E-46 |
| MS.gene061154 | MS.gene31674 | 0.836372 | 9.73E-57 | -1.69E-46 |
| MS.gene061159 | MS.gene31674 | 0.840428 | 8.75E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene31674 | 0.841305 | 5.15E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 110 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGGCTTGTTACATCTTT+TGG | 0.104044 | 1.1:-12135217 | MS.gene31674:CDS |
| CCAGCAATTGCAACCATTTC+GGG | 0.172046 | 1.1:-12137178 | None:intergenic |
| TTCCAGGGATTGCTTGTTTA+TGG | 0.209459 | 1.1:-12133101 | MS.gene31674:intron |
| CAACAAGTGGATCATGAAAA+AGG | 0.221799 | 1.1:+12132479 | None:intergenic |
| CCCTTCTGTTGAAGATCTTC+TGG | 0.243748 | 1.1:-12132329 | MS.gene31674:CDS |
| ACCAGCAATTGCAACCATTT+CGG | 0.249025 | 1.1:-12137179 | None:intergenic |
| AATTACCATCTGAACTGTTT+TGG | 0.282851 | 1.1:+12135058 | None:intergenic |
| GCAGGCATGTCTTTACTCTT+TGG | 0.308750 | 1.1:-12132548 | MS.gene31674:intron |
| AAGTAACTAACCAAGATTTC+AGG | 0.308843 | 1.1:+12137026 | None:intergenic |
| ATGCTTGAGCTGGCTTCTTT+AGG | 0.329248 | 1.1:-12130917 | MS.gene31674:CDS |
| CAGCTATATCTTCTGTGATA+TGG | 0.329588 | 1.1:-12134853 | MS.gene31674:CDS |
| GCCTGATGATCCTGAAATCT+TGG | 0.343687 | 1.1:-12137036 | MS.gene31674:intron |
| AACTCCTTCTTCTTCCTCTT+CGG | 0.352512 | 1.1:+12137095 | None:intergenic |
| TCTTTACTCTTTGGAGAGTA+AGG | 0.360636 | 1.1:-12132539 | MS.gene31674:CDS |
| TGAAGAGGCTGAAGTAGAAA+TGG | 0.361449 | 1.1:-12135175 | MS.gene31674:CDS |
| TTGGTTCGTGGTATATTGTA+TGG | 0.364756 | 1.1:+12132449 | None:intergenic |
| CCTTTATTTGCAGCTTATGT+TGG | 0.380058 | 1.1:-12135888 | MS.gene31674:intron |
| TGTCCCAATGGCAATGAAAC+TGG | 0.386115 | 1.1:-12136208 | MS.gene31674:CDS |
| CTTTATTTGCAGCTTATGTT+GGG | 0.398548 | 1.1:-12135887 | MS.gene31674:intron |
| AAACTCTCTTCAATGCAAAT+CGG | 0.409571 | 1.1:+12137059 | None:intergenic |
| TCTTCTTCCTCTTCGGCGTT+CGG | 0.418770 | 1.1:+12137102 | None:intergenic |
| GACAAGGTCGGGAAATATAT+AGG | 0.421336 | 1.1:-12133076 | MS.gene31674:CDS |
| CTGGCATTTGATGGTTTGAA+AGG | 0.435654 | 1.1:-12136189 | MS.gene31674:CDS |
| AAAGCTGTGGCAAACGCAAT+TGG | 0.436884 | 1.1:-12130863 | MS.gene31674:CDS |
| TTTGTTGCATCTGACCAGTA+TGG | 0.437315 | 1.1:+12131862 | None:intergenic |
| AAAAGTGCTGCTTGATCACT+TGG | 0.439349 | 1.1:-12131761 | MS.gene31674:CDS |
| GGTACAATTTCCAGCATGTC+TGG | 0.440193 | 1.1:+12131811 | None:intergenic |
| TTTAAGAAGGTGGATTTAGC+TGG | 0.441156 | 1.1:-12134446 | MS.gene31674:CDS |
| CAGAAGATATAGCTGAACTT+TGG | 0.444755 | 1.1:+12134861 | None:intergenic |
| AATTGCGTTTGCCACAGCTT+TGG | 0.449220 | 1.1:+12130865 | None:intergenic |
| ACCAAGATTTCAGGATCATC+AGG | 0.450187 | 1.1:+12137035 | None:intergenic |
| CATGCTGGAAATTGTACCCT+TGG | 0.454073 | 1.1:-12131806 | MS.gene31674:CDS |
| TCTGGCATCTGCTGACATAC+AGG | 0.454582 | 1.1:-12132311 | MS.gene31674:intron |
| AATGCCAGTTTCATTGCCAT+TGG | 0.454647 | 1.1:+12136204 | None:intergenic |
| TGTTTATGGTAGACAAGGTC+GGG | 0.459418 | 1.1:-12133087 | MS.gene31674:CDS |
| AACTCTCTTCAATGCAAATC+GGG | 0.460255 | 1.1:+12137060 | None:intergenic |
| TTAGGCATTGCACTGAGTAA+TGG | 0.461385 | 1.1:-12130899 | MS.gene31674:CDS |
| GCAATGAAACTGGCATTTGA+TGG | 0.464043 | 1.1:-12136198 | MS.gene31674:CDS |
| TCCAACCAAGACTTTGCAAA+AGG | 0.464603 | 1.1:+12135136 | None:intergenic |
| AGTCTTGGTTGGAAAGGAAA+AGG | 0.470726 | 1.1:-12135126 | MS.gene31674:CDS |
| AATGAGGCACCTTTGGTTCG+TGG | 0.470950 | 1.1:+12132437 | None:intergenic |
| GCAAGACAAGCAGAGGAAAG+AGG | 0.471221 | 1.1:-12135836 | MS.gene31674:CDS |
| ATGCCAGTTTCATTGCCATT+GGG | 0.481316 | 1.1:+12136205 | None:intergenic |
| TCAGAATGCATATCGATAGA+TGG | 0.486146 | 1.1:+12130808 | None:intergenic |
| TACCCTTGGGAACATGTAAA+GGG | 0.486391 | 1.1:-12131792 | MS.gene31674:CDS |
| GTACCCTTGGGAACATGTAA+AGG | 0.489992 | 1.1:-12131793 | MS.gene31674:CDS |
| CAAGACAAGCAGAGGAAAGA+GGG | 0.496208 | 1.1:-12135835 | MS.gene31674:CDS |
| GCTGCACGTATTCCCCGAAA+TGG | 0.504722 | 1.1:+12137165 | None:intergenic |
| TGAGGCCTCTCTCAAAGCCT+TGG | 0.508435 | 1.1:+12134704 | None:intergenic |
| GATATGCAGATAATGGCTAT+TGG | 0.510832 | 1.1:-12130962 | MS.gene31674:intron |
| GTGGATTTAGCTGGAAAAGA+TGG | 0.511679 | 1.1:-12134437 | MS.gene31674:CDS |
| ATTACCTCTCGACAGACGTC+CGG | 0.513505 | 1.1:+12133041 | None:intergenic |
| TTGCAAAGTCTTGGTTGGAA+AGG | 0.513697 | 1.1:-12135132 | MS.gene31674:CDS |
| GGTTTAAGCAACGATGAAGA+TGG | 0.514129 | 1.1:-12130842 | MS.gene31674:CDS |
| ATATAGGAGCAGCTTAGATC+CGG | 0.515316 | 1.1:-12133060 | MS.gene31674:CDS |
| CGGATACATTACGTCCATAC+TGG | 0.518060 | 1.1:-12131876 | MS.gene31674:CDS |
| TCAGAAGCCGAACGCCGAAG+AGG | 0.519206 | 1.1:-12137109 | MS.gene31674:CDS |
| CTTGGGAGTTACTGCTAATG+AGG | 0.523463 | 1.1:-12131743 | MS.gene31674:intron |
| GTCAAAGACAGGAAGAAAGA+AGG | 0.523896 | 1.1:-12134903 | MS.gene31674:intron |
| GTCTTGGTTGGAAAGGAAAA+GGG | 0.525732 | 1.1:-12135125 | MS.gene31674:CDS |
| CTGCTATAGATGATGTTGGC+AGG | 0.526203 | 1.1:-12136143 | MS.gene31674:CDS |
| TTTGAGAGAGGCCTCAGCAA+GGG | 0.528767 | 1.1:-12134697 | MS.gene31674:CDS |
| TCTCTCTTTCCTCCTTCCGT+CGG | 0.534651 | 1.1:+12137143 | None:intergenic |
| GTGAAAATTGTGATAGCCAC+TGG | 0.536129 | 1.1:-12134672 | MS.gene31674:CDS |
| GTTCCCTTTACATGTTCCCA+AGG | 0.536704 | 1.1:+12131789 | None:intergenic |
| CCTTCACAAAATGCAATAAG+TGG | 0.536888 | 1.1:+12132514 | None:intergenic |
| TACTGGTCAGATGCAACAAA+AGG | 0.539035 | 1.1:-12131859 | MS.gene31674:CDS |
| AATTTCTACTTCAACTGCCA+AGG | 0.539368 | 1.1:-12134721 | MS.gene31674:CDS |
| TGATGAGATCCGTATCCTCA+TGG | 0.539656 | 1.1:-12135801 | MS.gene31674:intron |
| TCAAGCTGTACCAGACATGC+TGG | 0.541670 | 1.1:-12131821 | MS.gene31674:CDS |
| TAAAACCAACCATGAGGATA+CGG | 0.541816 | 1.1:+12135792 | None:intergenic |
| ATGCTGGAAATTGTACCCTT+GGG | 0.548664 | 1.1:-12131805 | MS.gene31674:CDS |
| GTAATGTATCCGACACACTC+TGG | 0.552692 | 1.1:+12131887 | None:intergenic |
| GCCAGAAGATCTTCAACAGA+AGG | 0.554050 | 1.1:+12132328 | None:intergenic |
| TTGTTTATGGTAGACAAGGT+CGG | 0.557920 | 1.1:-12133088 | MS.gene31674:CDS |
| TACGTGCAGCCGACGGAAGG+AGG | 0.557994 | 1.1:-12137152 | MS.gene31674:CDS |
| CCAAAAGATGTAACAAGCCA+TGG | 0.561789 | 1.1:+12135217 | None:intergenic |
| AACTGCCAAGGCTTTGAGAG+AGG | 0.562759 | 1.1:-12134709 | MS.gene31674:CDS |
| TGATCATGAATTAAGTGAAG+AGG | 0.564233 | 1.1:-12135190 | MS.gene31674:CDS |
| TAATGTATCCGACACACTCT+GGG | 0.564410 | 1.1:+12131888 | None:intergenic |
| TCAATGTCACAACATGAACC+TGG | 0.570480 | 1.1:-12136021 | MS.gene31674:CDS |
| GATACTGCTATAGATGATGT+TGG | 0.571424 | 1.1:-12136147 | MS.gene31674:CDS |
| TTGAGAGAGGCCTCAGCAAG+GGG | 0.575910 | 1.1:-12134696 | MS.gene31674:CDS |
| GAATACGTGCAGCCGACGGA+AGG | 0.582345 | 1.1:-12137155 | MS.gene31674:CDS |
| TCCCACCAAAACAGTTCAGA+TGG | 0.584076 | 1.1:-12135063 | MS.gene31674:intron |
| TATATCTTCTGTGATATGGA+TGG | 0.587040 | 1.1:-12134849 | MS.gene31674:intron |
| AACGCCGAAGAGGAAGAAGA+AGG | 0.587913 | 1.1:-12137099 | MS.gene31674:CDS |
| TTCCCTTTACATGTTCCCAA+GGG | 0.592459 | 1.1:+12131790 | None:intergenic |
| AAGGAGGAAAGAGAGAGTAT+CGG | 0.592789 | 1.1:-12137136 | MS.gene31674:CDS |
| ACAATAGGAAGATTGAGTCC+AGG | 0.593719 | 1.1:+12136003 | None:intergenic |
| AGTAGAAATGGAGAAAGAAG+AGG | 0.597908 | 1.1:-12135163 | MS.gene31674:CDS |
| GACAGCAGCAAGACAAGCAG+AGG | 0.601250 | 1.1:-12135843 | MS.gene31674:CDS |
| TGATGTAGAGATGCTTGAGC+TGG | 0.601463 | 1.1:-12130927 | MS.gene31674:CDS |
| CTTTGAGAGAGGCCTCAGCA+AGG | 0.603249 | 1.1:-12134698 | MS.gene31674:CDS |
| CAGATAATGGCTATTGGTGA+TGG | 0.605598 | 1.1:-12130956 | MS.gene31674:CDS |
| TACAATATACCACGAACCAA+AGG | 0.605692 | 1.1:-12132446 | MS.gene31674:intron |
| CTCATCATTACAAAGAAGCA+CGG | 0.607621 | 1.1:+12136101 | None:intergenic |
| TTGCTTGTTTATGGTAGACA+AGG | 0.609418 | 1.1:-12133092 | MS.gene31674:CDS |
| CGGGGAATACGTGCAGCCGA+CGG | 0.613629 | 1.1:-12137159 | MS.gene31674:CDS |
| TGCATATCGATAGATGGCGT+CGG | 0.621958 | 1.1:+12130814 | None:intergenic |
| AGATCCGGACGTCTGTCGAG+AGG | 0.628487 | 1.1:-12133045 | MS.gene31674:intron |
| CCAGAAGATCTTCAACAGAA+GGG | 0.634354 | 1.1:+12132329 | None:intergenic |
| GCTTCGTCTAAATGTCCCAA+TGG | 0.644543 | 1.1:-12136220 | MS.gene31674:CDS |
| TTGGGAACATGTAAAGGGAA+CGG | 0.644997 | 1.1:-12131787 | MS.gene31674:CDS |
| GTATGGAGTGAATCAACAAG+TGG | 0.650294 | 1.1:+12132466 | None:intergenic |
| CAGCAATTGCAACCATTTCG+GGG | 0.658853 | 1.1:-12137177 | MS.gene31674:CDS |
| AGACACTGCCCAGAGTGTGT+CGG | 0.664859 | 1.1:-12131896 | MS.gene31674:CDS |
| ATCAGAGAAGACCAAAGCTG+TGG | 0.670500 | 1.1:-12130876 | MS.gene31674:CDS |
| AAAGTGCTGCTTGATCACTT+GGG | 0.694800 | 1.1:-12131760 | MS.gene31674:CDS |
| TGGTACAGCTTGAACAACAG+TGG | 0.699418 | 1.1:+12131831 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAAATATAAATATAT+AGG | - | chr1.1:12134232-12134251 | MS.gene31674:intron | 0.0% |
| !! | AAGAAAAATATAATAAAACA+AGG | + | chr1.1:12133945-12133964 | None:intergenic | 10.0% |
| !! | AGAAAAAAAAAATAATTCTA+AGG | + | chr1.1:12135847-12135866 | None:intergenic | 10.0% |
| !! | TATAAATTATACTATAATTG+AGG | + | chr1.1:12135722-12135741 | None:intergenic | 10.0% |
| !! | TTCAATTAAAAACAAAAAAA+AGG | + | chr1.1:12133199-12133218 | None:intergenic | 10.0% |
| !! | TTTACAAATAAAGTAATTAA+AGG | - | chr1.1:12134340-12134359 | MS.gene31674:intron | 10.0% |
| !!! | TATTTTATTCATTCTTTTTT+GGG | - | chr1.1:12131703-12131722 | MS.gene31674:intron | 10.0% |
| !! | AAAAACAAAAAAAAGGATAA+TGG | + | chr1.1:12133192-12133211 | None:intergenic | 15.0% |
| !! | AAAATAAATAGCTTAAAACA+TGG | + | chr1.1:12133374-12133393 | None:intergenic | 15.0% |
| !! | AAGATACAATTATATTATGT+TGG | - | chr1.1:12131298-12131317 | MS.gene31674:intron | 15.0% |
| !! | GAAATTAAAAGTTAAAGTAA+CGG | - | chr1.1:12132436-12132455 | MS.gene31674:intron | 15.0% |
| !! | TTATTATGTTAACTCAAATA+TGG | + | chr1.1:12136365-12136384 | None:intergenic | 15.0% |
| !! | TTTCAGAATATATATACTTT+AGG | + | chr1.1:12135352-12135371 | None:intergenic | 15.0% |
| !!! | CAATTTTTCTAATATAAATG+TGG | - | chr1.1:12133434-12133453 | MS.gene31674:intron | 15.0% |
| !!! | CTATTTTATTCATTCTTTTT+TGG | - | chr1.1:12131702-12131721 | MS.gene31674:intron | 15.0% |
| !!! | TAAAATTGATGTCATATTTT+AGG | + | chr1.1:12136773-12136792 | None:intergenic | 15.0% |
| !!! | TTAAGTATCATATATCTTTT+TGG | - | chr1.1:12134651-12134670 | MS.gene31674:intron | 15.0% |
| !!! | TTATTTTCATTAACAAAAGT+TGG | - | chr1.1:12132334-12132353 | MS.gene31674:CDS | 15.0% |
| !! | AACTTGTATGTGATATTTAT+TGG | + | chr1.1:12135897-12135916 | None:intergenic | 20.0% |
| !! | AATGTTCCTTTATATAATAC+AGG | + | chr1.1:12133223-12133242 | None:intergenic | 20.0% |
| !! | AATTTAGTCCTTGAAATATT+TGG | + | chr1.1:12136822-12136841 | None:intergenic | 20.0% |
| !! | AATTTATGATATGCAGATAA+TGG | - | chr1.1:12137013-12137032 | MS.gene31674:intron | 20.0% |
| !! | AGATATATGATACTTAAAAG+CGG | + | chr1.1:12134648-12134667 | None:intergenic | 20.0% |
| !! | ATTTGCACAAAAAAAATATG+GGG | - | chr1.1:12133033-12133052 | MS.gene31674:intron | 20.0% |
| !! | CATTTGCACAAAAAAAATAT+GGG | - | chr1.1:12133032-12133051 | MS.gene31674:intron | 20.0% |
| !! | CTGAAAAAAAGATTAAAATG+AGG | + | chr1.1:12132743-12132762 | None:intergenic | 20.0% |
| !! | GTTTATACAAAAACTTAACA+AGG | - | chr1.1:12131903-12131922 | MS.gene31674:CDS | 20.0% |
| !! | TAATTTGAACATTGTGAATT+AGG | - | chr1.1:12133490-12133509 | MS.gene31674:intron | 20.0% |
| !! | TAGTAATCAAACGATTATTT+AGG | - | chr1.1:12131041-12131060 | MS.gene31674:intron | 20.0% |
| !! | TATAAATGTGGATATTCATA+TGG | - | chr1.1:12133446-12133465 | MS.gene31674:intron | 20.0% |
| !! | TATCTGCATATCATAAATTT+GGG | + | chr1.1:12137012-12137031 | None:intergenic | 20.0% |
| !! | TATTTAACTATTACAGTCTT+TGG | + | chr1.1:12134128-12134147 | None:intergenic | 20.0% |
| !! | TGCATTGAATAAGATTATTT+AGG | - | chr1.1:12136935-12136954 | MS.gene31674:intron | 20.0% |
| !! | TTAAGAGAAAAATACTTTAC+AGG | - | chr1.1:12135620-12135639 | MS.gene31674:intron | 20.0% |
| !! | TTATCTGCATATCATAAATT+TGG | + | chr1.1:12137013-12137032 | None:intergenic | 20.0% |
| !! | TTGAATCCTGTATTATATAA+AGG | - | chr1.1:12133214-12133233 | MS.gene31674:intron | 20.0% |
| !! | TTGTTATGAAAAACTGAAAA+AGG | + | chr1.1:12134979-12134998 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTGTTTTTCTCAT+TGG | + | chr1.1:12135228-12135247 | None:intergenic | 20.0% |
| !!! | ATTAATTTGAAGCTTGAAAT+AGG | - | chr1.1:12131545-12131564 | MS.gene31674:intron | 20.0% |
| !!! | CTCATTTTAATCTTTTTTTC+AGG | - | chr1.1:12132741-12132760 | MS.gene31674:intron | 20.0% |
| !!! | GACATCAATTTTATTTTACA+AGG | - | chr1.1:12136780-12136799 | MS.gene31674:intron | 20.0% |
| !!! | TGTGATAGATATTTTTAAGA+AGG | - | chr1.1:12133523-12133542 | MS.gene31674:intron | 20.0% |
| !!! | TGTTTTTTGTTTTTCTCATT+GGG | + | chr1.1:12135227-12135246 | None:intergenic | 20.0% |
| !!! | TTAATTTCTCTCTTTTGAAA+TGG | + | chr1.1:12132424-12132443 | None:intergenic | 20.0% |
| !!! | TTAATTTGAAGCTTGAAATA+GGG | - | chr1.1:12131546-12131565 | MS.gene31674:intron | 20.0% |
| !!! | TTTTTGTTATGTAGAAAACT+GGG | + | chr1.1:12135298-12135317 | None:intergenic | 20.0% |
| ! | AACATGAACCAAATATTTCA+AGG | - | chr1.1:12136811-12136830 | MS.gene31674:intron | 25.0% |
| ! | AATATAAAGCAAACATCACA+AGG | + | chr1.1:12136709-12136728 | None:intergenic | 25.0% |
| ! | ATAAAACCAAAATACCATAC+TGG | + | chr1.1:12132985-12133004 | None:intergenic | 25.0% |
| ! | ATACAAACTTGAAACTTAGA+TGG | - | chr1.1:12132042-12132061 | MS.gene31674:intron | 25.0% |
| ! | ATATTATAAAACCAACCATG+AGG | + | chr1.1:12132199-12132218 | None:intergenic | 25.0% |
| ! | ATCCAAACAAATATCCTTTA+TGG | + | chr1.1:12133860-12133879 | None:intergenic | 25.0% |
| ! | ATCTGCATATCATAAATTTG+GGG | + | chr1.1:12137011-12137030 | None:intergenic | 25.0% |
| ! | ATCTTGCTAACAATTACATT+TGG | - | chr1.1:12136041-12136060 | MS.gene31674:CDS | 25.0% |
| ! | CCATTTGCACAAAAAAAATA+TGG | - | chr1.1:12133031-12133050 | MS.gene31674:intron | 25.0% |
| ! | GAAAATGCAATTCTTACAAT+AGG | + | chr1.1:12131997-12132016 | None:intergenic | 25.0% |
| ! | TAATTAAAGGCTATGAATGA+AGG | - | chr1.1:12134353-12134372 | MS.gene31674:intron | 25.0% |
| ! | TACAAAAACTTAACAAGGAA+TGG | - | chr1.1:12131908-12131927 | MS.gene31674:CDS | 25.0% |
| ! | TAGAATGTAAGCAATCATAT+AGG | + | chr1.1:12135579-12135598 | None:intergenic | 25.0% |
| ! | TATGAAAAACTGAAAAAGGA+GGG | + | chr1.1:12134975-12134994 | None:intergenic | 25.0% |
| ! | TGCACTTACTTACTAAATAA+TGG | - | chr1.1:12132476-12132495 | MS.gene31674:CDS | 25.0% |
| ! | TGTAGTCAATGAACATAATA+TGG | + | chr1.1:12135177-12135196 | None:intergenic | 25.0% |
| ! | TTAAAAATATCTATCACAGC+TGG | + | chr1.1:12133521-12133540 | None:intergenic | 25.0% |
| ! | TTATGAAAAACTGAAAAAGG+AGG | + | chr1.1:12134976-12134995 | None:intergenic | 25.0% |
| ! | TTTGCACAAAAAAAATATGG+GGG | - | chr1.1:12133034-12133053 | MS.gene31674:intron | 25.0% |
| !! | ACTTATGAATTATGATGATG+AGG | + | chr1.1:12132022-12132041 | None:intergenic | 25.0% |
| !! | TATCAGAAACTACATTTTGT+TGG | + | chr1.1:12134773-12134792 | None:intergenic | 25.0% |
| !! | TTTCATTTTCTTCTACTTGT+GGG | - | chr1.1:12132606-12132625 | MS.gene31674:intron | 25.0% |
| !! | TTTTGTGATCATATTTCACA+CGG | - | chr1.1:12136455-12136474 | MS.gene31674:intron | 25.0% |
| !!! | CCATATTTTTTTTGTGCAAA+TGG | + | chr1.1:12133034-12133053 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTATGTAGAAAAC+TGG | + | chr1.1:12135299-12135318 | None:intergenic | 25.0% |
| !!! | GATAGATATTTTTAAGAAGG+TGG | - | chr1.1:12133526-12133545 | MS.gene31674:intron | 25.0% |
| !!! | TATTTTTTTTGTGCAAATGG+AGG | + | chr1.1:12133031-12133050 | None:intergenic | 25.0% |
| AAACTCTCTTCAATGCAAAT+CGG | + | chr1.1:12130926-12130945 | None:intergenic | 30.0% | |
| AAATCCATCAATTGTGTTCA+TGG | - | chr1.1:12136884-12136903 | MS.gene31674:intron | 30.0% | |
| AAATGTTGTCCAGTTTCAAT+TGG | - | chr1.1:12131491-12131510 | MS.gene31674:intron | 30.0% | |
| AACAAGTGGATCATGAAAAA+GGG | + | chr1.1:12135505-12135524 | None:intergenic | 30.0% | |
| AAGTAACTAACCAAGATTTC+AGG | + | chr1.1:12130959-12130978 | None:intergenic | 30.0% | |
| AAGTCATGTGAAATAGTTTG+TGG | - | chr1.1:12131594-12131613 | MS.gene31674:intron | 30.0% | |
| AATAAAGTCCAAAACGACAA+AGG | + | chr1.1:12135036-12135055 | None:intergenic | 30.0% | |
| AATGATAGAAACTGTGATAG+TGG | + | chr1.1:12134814-12134833 | None:intergenic | 30.0% | |
| ACTACTAGAACTAATAGAGT+GGG | + | chr1.1:12131025-12131044 | None:intergenic | 30.0% | |
| AGAAACAGAATAGAGTAAGA+TGG | - | chr1.1:12134462-12134481 | MS.gene31674:CDS | 30.0% | |
| ATAGATGAATTGTCAAAGAC+AGG | - | chr1.1:12133068-12133087 | MS.gene31674:CDS | 30.0% | |
| ATGATAGAAACTGTGATAGT+GGG | + | chr1.1:12134813-12134832 | None:intergenic | 30.0% | |
| ATGATCACAAAATCATGTCA+TGG | + | chr1.1:12136447-12136466 | None:intergenic | 30.0% | |
| ATGGTATTCTGACAAATCAT+GGG | + | chr1.1:12133355-12133374 | None:intergenic | 30.0% | |
| ATGTAGTATGATTGCTAATG+AGG | - | chr1.1:12136554-12136573 | MS.gene31674:intron | 30.0% | |
| CAGTCAATACAAACTTGTAT+GGG | + | chr1.1:12135945-12135964 | None:intergenic | 30.0% | |
| CATCAATTTAGTCCTCTAAA+AGG | - | chr1.1:12131206-12131225 | MS.gene31674:intron | 30.0% | |
| CTCGAGTAGAAATAAATTGT+TGG | - | chr1.1:12132544-12132563 | MS.gene31674:CDS | 30.0% | |
| GAACATAATATGGCTATTGA+GGG | + | chr1.1:12135167-12135186 | None:intergenic | 30.0% | |
| GACAACAAAATAAATGTGTG+AGG | + | chr1.1:12136284-12136303 | None:intergenic | 30.0% | |
| GAGATATTCGATGACAATTA+TGG | - | chr1.1:12133834-12133853 | MS.gene31674:intron | 30.0% | |
| GATAGAAATAATCACTGAAG+AGG | - | chr1.1:12131091-12131110 | MS.gene31674:intron | 30.0% | |
| TAAGTGCATTTGAAAGTTCT+TGG | + | chr1.1:12132464-12132483 | None:intergenic | 30.0% | |
| TACTACTAGAACTAATAGAG+TGG | + | chr1.1:12131026-12131045 | None:intergenic | 30.0% | |
| TATATCTTCTGTGATATGGA+TGG | - | chr1.1:12133133-12133152 | MS.gene31674:intron | 30.0% | |
| TATTCACTGTTCTCTATTGA+AGG | - | chr1.1:12135757-12135776 | MS.gene31674:intron | 30.0% | |
| TCAAGGACTAAATTAGAACA+AGG | - | chr1.1:12136828-12136847 | MS.gene31674:intron | 30.0% | |
| TCACACGTACATAAACTAAA+AGG | + | chr1.1:12136613-12136632 | None:intergenic | 30.0% | |
| TCAGAAAGTGAAAGTAAGAT+TGG | - | chr1.1:12136318-12136337 | MS.gene31674:intron | 30.0% | |
| TCATGAAATCCAATTGAAAC+TGG | + | chr1.1:12131503-12131522 | None:intergenic | 30.0% | |
| TGAACATAATATGGCTATTG+AGG | + | chr1.1:12135168-12135187 | None:intergenic | 30.0% | |
| TGATCATGAATTAAGTGAAG+AGG | - | chr1.1:12132792-12132811 | MS.gene31674:intron | 30.0% | |
| TTCAATTGGATTTCATGATC+AGG | - | chr1.1:12131505-12131524 | MS.gene31674:intron | 30.0% | |
| TTGGAGATAACTTAATCTCT+TGG | - | chr1.1:12134670-12134689 | MS.gene31674:CDS | 30.0% | |
| TTGGTATCATACATATAGAG+TGG | - | chr1.1:12136337-12136356 | MS.gene31674:intron | 30.0% | |
| ! | AATTACCATCTGAACTGTTT+TGG | + | chr1.1:12132927-12132946 | None:intergenic | 30.0% |
| ! | AGTCATGTGAAATAGTTTGT+GGG | - | chr1.1:12131595-12131614 | MS.gene31674:intron | 30.0% |
| ! | ATTGTTTCAGAATTTTCTCC+TGG | - | chr1.1:12133569-12133588 | MS.gene31674:intron | 30.0% |
| ! | CTTTATTTGCAGCTTATGTT+GGG | - | chr1.1:12132095-12132114 | MS.gene31674:intron | 30.0% |
| ! | GTTTCATTTTCTTCTACTTG+TGG | - | chr1.1:12132605-12132624 | MS.gene31674:intron | 30.0% |
| ! | TATGAATTATGATGATGAGG+TGG | + | chr1.1:12132019-12132038 | None:intergenic | 30.0% |
| ! | TGTTTTTCTCATTGGGTAAA+AGG | + | chr1.1:12135220-12135239 | None:intergenic | 30.0% |
| ! | TTCATTTTCTTCTACTTGTG+GGG | - | chr1.1:12132607-12132626 | MS.gene31674:intron | 30.0% |
| ! | TTGTTTCAGAATTTTCTCCT+GGG | - | chr1.1:12133570-12133589 | MS.gene31674:intron | 30.0% |
| ! | TTTTATTGCAGTTGTCTTTG+AGG | + | chr1.1:12135976-12135995 | None:intergenic | 30.0% |
| !! | AGGAAAAGTATTGGATTGTT+TGG | - | chr1.1:12134551-12134570 | MS.gene31674:intron | 30.0% |
| !! | CTTTTAGAGGACTAAATTGA+TGG | + | chr1.1:12131208-12131227 | None:intergenic | 30.0% |
| !! | GGAAAAGTATTGGATTGTTT+GGG | - | chr1.1:12134552-12134571 | MS.gene31674:intron | 30.0% |
| !! | GGTTTTAATCTCTGAAAAAC+AGG | - | chr1.1:12136646-12136665 | MS.gene31674:intron | 30.0% |
| !!! | CAAAAATTCCTGTTTTGATC+CGG | - | chr1.1:12131408-12131427 | MS.gene31674:intron | 30.0% |
| !!! | TAATCTTTTTTTCAGGTCCA+TGG | - | chr1.1:12132748-12132767 | MS.gene31674:intron | 30.0% |
| !!! | TCTGAAATGTCATTTTTTGC+AGG | - | chr1.1:12135365-12135384 | MS.gene31674:intron | 30.0% |
| !!! | TTTTTTGATAGTCTGTACTC+TGG | - | chr1.1:12131345-12131364 | MS.gene31674:intron | 30.0% |
| AAAGGAATTCATCAAGCACT+TGG | + | chr1.1:12132079-12132098 | None:intergenic | 35.0% | |
| AACTCTCTTCAATGCAAATC+GGG | + | chr1.1:12130925-12130944 | None:intergenic | 35.0% | |
| AAGTTAGCAATTCCAGATAG+TGG | - | chr1.1:12134082-12134101 | MS.gene31674:intron | 35.0% | |
| AAGTTGTCAACATTACTCAG+TGG | - | chr1.1:12133812-12133831 | MS.gene31674:intron | 35.0% | |
| AATTTCTACTTCAACTGCCA+AGG | - | chr1.1:12133261-12133280 | MS.gene31674:intron | 35.0% | |
| ACGTGTGACACACTATTTAT+TGG | - | chr1.1:12136625-12136644 | MS.gene31674:intron | 35.0% | |
| AGGTGAAATGTCAAACTACA+AGG | + | chr1.1:12135827-12135846 | None:intergenic | 35.0% | |
| AGTAGAAATGGAGAAAGAAG+AGG | - | chr1.1:12132819-12132838 | MS.gene31674:intron | 35.0% | |
| AGTTAGCAATTCCAGATAGT+GGG | - | chr1.1:12134083-12134102 | MS.gene31674:intron | 35.0% | |
| ATTAATCATCCATTGAGCTG+AGG | - | chr1.1:12136499-12136518 | MS.gene31674:intron | 35.0% | |
| ATTACCTGTAAAAAAACCCC+AGG | + | chr1.1:12133590-12133609 | None:intergenic | 35.0% | |
| CAAAACATGTAGCAAGTAAC+CGG | + | chr1.1:12131430-12131449 | None:intergenic | 35.0% | |
| CAACAAGTGGATCATGAAAA+AGG | + | chr1.1:12135506-12135525 | None:intergenic | 35.0% | |
| CAGAAGATATAGCTGAACTT+TGG | + | chr1.1:12133124-12133143 | None:intergenic | 35.0% | |
| CAGCTATATCTTCTGTGATA+TGG | - | chr1.1:12133129-12133148 | MS.gene31674:intron | 35.0% | |
| CATATAGGATCCCAATAATG+AGG | + | chr1.1:12135564-12135583 | None:intergenic | 35.0% | |
| CATGGTATTCTGACAAATCA+TGG | + | chr1.1:12133356-12133375 | None:intergenic | 35.0% | |
| CCAACATAAGCTGCAAATAA+AGG | + | chr1.1:12132097-12132116 | None:intergenic | 35.0% | |
| CCTTCACAAAATGCAATAAG+TGG | + | chr1.1:12135471-12135490 | None:intergenic | 35.0% | |
| CTCATCATTACAAAGAAGCA+CGG | + | chr1.1:12131884-12131903 | None:intergenic | 35.0% | |
| CTGATAGTTCCATATGAAGA+GGG | - | chr1.1:12131136-12131155 | MS.gene31674:intron | 35.0% | |
| GATACTGCTATAGATGATGT+TGG | - | chr1.1:12131835-12131854 | MS.gene31674:CDS | 35.0% | |
| GATGACAATTATGGCCATAA+AGG | - | chr1.1:12133843-12133862 | MS.gene31674:intron | 35.0% | |
| GCAATCATACTACATTTGCA+TGG | + | chr1.1:12136549-12136568 | None:intergenic | 35.0% | |
| GCAGTCAATACAAACTTGTA+TGG | + | chr1.1:12135946-12135965 | None:intergenic | 35.0% | |
| GGAAAACATGTTGAATCTGA+TGG | + | chr1.1:12136426-12136445 | None:intergenic | 35.0% | |
| GGCCATAAAGGATATTTGTT+TGG | - | chr1.1:12133855-12133874 | MS.gene31674:intron | 35.0% | |
| GTGAGGTGAATAGATATTTG+TGG | + | chr1.1:12136267-12136286 | None:intergenic | 35.0% | |
| GTTGAAGCTTGAGATACAAA+AGG | - | chr1.1:12132566-12132585 | MS.gene31674:intron | 35.0% | |
| TAAAACCAACCATGAGGATA+CGG | + | chr1.1:12132193-12132212 | None:intergenic | 35.0% | |
| TACAATATACCACGAACCAA+AGG | - | chr1.1:12135536-12135555 | MS.gene31674:intron | 35.0% | |
| TCAGAATGCATATCGATAGA+TGG | + | chr1.1:12137177-12137196 | None:intergenic | 35.0% | |
| TCATAGACACAATTCGAACT+CGG | - | chr1.1:12134260-12134279 | MS.gene31674:intron | 35.0% | |
| TCTGATAGTTCCATATGAAG+AGG | - | chr1.1:12131135-12131154 | MS.gene31674:intron | 35.0% | |
| TGTAAGGAAGATAAGGCATA+GGG | + | chr1.1:12134853-12134872 | None:intergenic | 35.0% | |
| TTAATCATCCATTGAGCTGA+GGG | - | chr1.1:12136500-12136519 | MS.gene31674:intron | 35.0% | |
| TTGCTTGTTTATGGTAGACA+AGG | - | chr1.1:12134890-12134909 | MS.gene31674:CDS | 35.0% | |
| TTGTCCATGAACACAATTGA+TGG | + | chr1.1:12136891-12136910 | None:intergenic | 35.0% | |
| TTGTGTTACACTTCTGCAAA+AGG | - | chr1.1:12132258-12132277 | MS.gene31674:intron | 35.0% | |
| TTGTTTATGGTAGACAAGGT+CGG | - | chr1.1:12134894-12134913 | MS.gene31674:CDS | 35.0% | |
| TTTGTGTTTCTTGTATGTGC+AGG | - | chr1.1:12135416-12135435 | MS.gene31674:intron | 35.0% | |
| ! | AATACTTTTCCTGCCAAACA+AGG | + | chr1.1:12134543-12134562 | None:intergenic | 35.0% |
| ! | AATAGTTTGTGGGAACTTCA+TGG | - | chr1.1:12131605-12131624 | MS.gene31674:intron | 35.0% |
| ! | ATACTTTTCCTGCCAAACAA+GGG | + | chr1.1:12134542-12134561 | None:intergenic | 35.0% |
| ! | CCACTTATTGCATTTTGTGA+AGG | - | chr1.1:12135468-12135487 | MS.gene31674:intron | 35.0% |
| ! | CCTTTATTTGCAGCTTATGT+TGG | - | chr1.1:12132094-12132113 | MS.gene31674:intron | 35.0% |
| ! | GATATGCAGATAATGGCTAT+TGG | - | chr1.1:12137020-12137039 | MS.gene31674:intron | 35.0% |
| ! | GATCAAACACATCCTTTTAG+AGG | + | chr1.1:12131221-12131240 | None:intergenic | 35.0% |
| ! | GCTTTCTGTCATCATTGTTT+TGG | - | chr1.1:12136676-12136695 | MS.gene31674:intron | 35.0% |
| ! | TCTTTACTCTTTGGAGAGTA+AGG | - | chr1.1:12135443-12135462 | MS.gene31674:intron | 35.0% |
| ! | TCTTTTTCCATACCAGGAAA+GGG | - | chr1.1:12135780-12135799 | MS.gene31674:intron | 35.0% |
| ! | TGTGAACCAGTATGGTATTT+TGG | - | chr1.1:12132976-12132995 | MS.gene31674:intron | 35.0% |
| ! | TGTTTCAGAATTTTCTCCTG+GGG | - | chr1.1:12133571-12133590 | MS.gene31674:intron | 35.0% |
| ! | TTGGTTCGTGGTATATTGTA+TGG | + | chr1.1:12135536-12135555 | None:intergenic | 35.0% |
| ! | TTGTTTGGCAGGAAAAGTAT+TGG | - | chr1.1:12134542-12134561 | MS.gene31674:intron | 35.0% |
| ! | TTTAAGAAGGTGGATTTAGC+TGG | - | chr1.1:12133536-12133555 | MS.gene31674:intron | 35.0% |
| ! | TTTATTGCAAAGGTTAGCTG+TGG | - | chr1.1:12135050-12135069 | MS.gene31674:intron | 35.0% |
| !! | ACAACATCTTACTTTTCCAG+TGG | + | chr1.1:12133329-12133348 | None:intergenic | 35.0% |
| !! | CGTTTTGGACTTTATTGCAA+AGG | - | chr1.1:12135040-12135059 | MS.gene31674:intron | 35.0% |
| !!! | CATGGCTTGTTACATCTTTT+GGG | - | chr1.1:12132766-12132785 | MS.gene31674:intron | 35.0% |
| AACTCCTTCTTCTTCCTCTT+CGG | + | chr1.1:12130890-12130909 | None:intergenic | 40.0% | |
| AATGCCAGTTTCATTGCCAT+TGG | + | chr1.1:12131781-12131800 | None:intergenic | 40.0% | |
| ACAAAAGGTGGAAAGCAAAC+TGG | - | chr1.1:12132581-12132600 | MS.gene31674:intron | 40.0% | |
| ACAACATGAGATGAGCATGT+TGG | - | chr1.1:12132651-12132670 | MS.gene31674:intron | 40.0% | |
| ACAATAGGAAGATTGAGTCC+AGG | + | chr1.1:12131982-12132001 | None:intergenic | 40.0% | |
| ACAGCCTGCTGCAATATTAA+AGG | + | chr1.1:12136961-12136980 | None:intergenic | 40.0% | |
| ACCAAGATTTCAGGATCATC+AGG | + | chr1.1:12130950-12130969 | None:intergenic | 40.0% | |
| AGAATAGAGTAAGATGGAGC+CGG | - | chr1.1:12134468-12134487 | MS.gene31674:CDS | 40.0% | |
| AGTCTTGGTTGGAAAGGAAA+AGG | - | chr1.1:12132856-12132875 | MS.gene31674:intron | 40.0% | |
| ATATAGGAGCAGCTTAGATC+CGG | - | chr1.1:12134922-12134941 | MS.gene31674:intron | 40.0% | |
| ATGCCAGTTTCATTGCCATT+GGG | + | chr1.1:12131780-12131799 | None:intergenic | 40.0% | |
| ATGCTGGAAATTGTACCCTT+GGG | - | chr1.1:12136177-12136196 | MS.gene31674:CDS | 40.0% | |
| ATGGAGGTTACTTGAATGTG+AGG | + | chr1.1:12133015-12133034 | None:intergenic | 40.0% | |
| CATAGACACAATTCGAACTC+GGG | - | chr1.1:12134261-12134280 | MS.gene31674:intron | 40.0% | |
| CATGAAAAAGGGTTAAGCAG+CGG | + | chr1.1:12135494-12135513 | None:intergenic | 40.0% | |
| CATGTGGTGTAAGGAAGATA+AGG | + | chr1.1:12134860-12134879 | None:intergenic | 40.0% | |
| CCAAAACGACAAAGGAATAC+AGG | + | chr1.1:12135028-12135047 | None:intergenic | 40.0% | |
| CCAAAAGATGTAACAAGCCA+TGG | + | chr1.1:12132768-12132787 | None:intergenic | 40.0% | |
| CCAGAAGATCTTCAACAGAA+GGG | + | chr1.1:12135656-12135675 | None:intergenic | 40.0% | |
| CTGACATACAGGTATTCACT+AGG | - | chr1.1:12135682-12135701 | MS.gene31674:intron | 40.0% | |
| CTGGACAAAATGTTCTCCTA+TGG | - | chr1.1:12131364-12131383 | MS.gene31674:intron | 40.0% | |
| GAAGCTTGAGATACAAAAGG+TGG | - | chr1.1:12132569-12132588 | MS.gene31674:intron | 40.0% | |
| GACAAGGTCGGGAAATATAT+AGG | - | chr1.1:12134906-12134925 | MS.gene31674:intron | 40.0% | |
| GCAATGAAACTGGCATTTGA+TGG | - | chr1.1:12131784-12131803 | MS.gene31674:CDS | 40.0% | |
| GCGTCATCAGAAACATGAAA+AGG | + | chr1.1:12133619-12133638 | None:intergenic | 40.0% | |
| GGTTTAAGCAACGATGAAGA+TGG | - | chr1.1:12137140-12137159 | MS.gene31674:CDS | 40.0% | |
| GTATGGAGTGAATCAACAAG+TGG | + | chr1.1:12135519-12135538 | None:intergenic | 40.0% | |
| GTCAAAGACAGGAAGAAAGA+AGG | - | chr1.1:12133079-12133098 | MS.gene31674:CDS | 40.0% | |
| GTCTTGGTTGGAAAGGAAAA+GGG | - | chr1.1:12132857-12132876 | MS.gene31674:intron | 40.0% | |
| GTGAAAATTGTGATAGCCAC+TGG | - | chr1.1:12133310-12133329 | MS.gene31674:intron | 40.0% | |
| GTGGATTTAGCTGGAAAAGA+TGG | - | chr1.1:12133545-12133564 | MS.gene31674:intron | 40.0% | |
| GTGTAAGGAAGATAAGGCAT+AGG | + | chr1.1:12134854-12134873 | None:intergenic | 40.0% | |
| GTTCTCCTATGGTTTAGTGA+GGG | - | chr1.1:12131375-12131394 | MS.gene31674:intron | 40.0% | |
| TAATCATCCATTGAGCTGAG+GGG | - | chr1.1:12136501-12136520 | MS.gene31674:intron | 40.0% | |
| TAATGTATCCGACACACTCT+GGG | + | chr1.1:12136097-12136116 | None:intergenic | 40.0% | |
| TACCATAAACAAGCAATCCC+TGG | + | chr1.1:12134886-12134905 | None:intergenic | 40.0% | |
| TACCCTTGGGAACATGTAAA+GGG | - | chr1.1:12136190-12136209 | MS.gene31674:CDS | 40.0% | |
| TACTGGTCAGATGCAACAAA+AGG | - | chr1.1:12136123-12136142 | MS.gene31674:CDS | 40.0% | |
| TAGGCCTTTAATATTGCAGC+AGG | - | chr1.1:12136954-12136973 | MS.gene31674:intron | 40.0% | |
| TATTATCGAGCTCACTTGCT+GGG | - | chr1.1:12135249-12135268 | MS.gene31674:intron | 40.0% | |
| TCAACATCTGTGAACCAGTA+TGG | - | chr1.1:12132968-12132987 | MS.gene31674:intron | 40.0% | |
| TCAATGTCACAACATGAACC+TGG | - | chr1.1:12131961-12131980 | MS.gene31674:intron | 40.0% | |
| TCCAACCAAGACTTTGCAAA+AGG | + | chr1.1:12132849-12132868 | None:intergenic | 40.0% | |
| TGAAGAGGCTGAAGTAGAAA+TGG | - | chr1.1:12132807-12132826 | MS.gene31674:intron | 40.0% | |
| TGGAGGTTACTTGAATGTGA+GGG | + | chr1.1:12133014-12133033 | None:intergenic | 40.0% | |
| TGTACAGCATAACACTGTCT+TGG | + | chr1.1:12132688-12132707 | None:intergenic | 40.0% | |
| TGTTCTCCTATGGTTTAGTG+AGG | - | chr1.1:12131374-12131393 | MS.gene31674:intron | 40.0% | |
| TGTTTATGGTAGACAAGGTC+GGG | - | chr1.1:12134895-12134914 | MS.gene31674:CDS | 40.0% | |
| TTACACTTCTGCAAAAGGCA+TGG | - | chr1.1:12132263-12132282 | MS.gene31674:intron | 40.0% | |
| TTATTATCGAGCTCACTTGC+TGG | - | chr1.1:12135248-12135267 | MS.gene31674:intron | 40.0% | |
| TTCATCAAGCACTTGGCAAT+TGG | + | chr1.1:12132072-12132091 | None:intergenic | 40.0% | |
| TTCCAGGGATTGCTTGTTTA+TGG | - | chr1.1:12134881-12134900 | MS.gene31674:CDS | 40.0% | |
| TTCCCTTTACATGTTCCCAA+GGG | + | chr1.1:12136195-12136214 | None:intergenic | 40.0% | |
| TTCTCCTATGGTTTAGTGAG+GGG | - | chr1.1:12131376-12131395 | MS.gene31674:intron | 40.0% | |
| TTGCAAAGTCTTGGTTGGAA+AGG | - | chr1.1:12132850-12132869 | MS.gene31674:intron | 40.0% | |
| TTGGGAACATGTAAAGGGAA+CGG | - | chr1.1:12136195-12136214 | MS.gene31674:CDS | 40.0% | |
| TTTGTTGCATCTGACCAGTA+TGG | + | chr1.1:12136123-12136142 | None:intergenic | 40.0% | |
| ! | AAGGAGGAAAGAGAGAGTAT+CGG | - | chr1.1:12130846-12130865 | MS.gene31674:CDS | 40.0% |
| ! | CAGATAATGGCTATTGGTGA+TGG | - | chr1.1:12137026-12137045 | MS.gene31674:intron | 40.0% |
| ! | CTGGCATTTGATGGTTTGAA+AGG | - | chr1.1:12131793-12131812 | MS.gene31674:CDS | 40.0% |
| ! | CTTTTTCCATACCAGGAAAG+GGG | - | chr1.1:12135781-12135800 | MS.gene31674:intron | 40.0% |
| ! | GAACTCCTTTTGCAAAGTCT+TGG | - | chr1.1:12132841-12132860 | MS.gene31674:intron | 40.0% |
| ! | GTCTTTTTCCATACCAGGAA+AGG | - | chr1.1:12135779-12135798 | MS.gene31674:intron | 40.0% |
| ! | TCCTTTTGCAAAGTCTTGGT+TGG | - | chr1.1:12132845-12132864 | MS.gene31674:intron | 40.0% |
| ! | TGAAGGTCTTTTTCCATACC+AGG | - | chr1.1:12135774-12135793 | MS.gene31674:intron | 40.0% |
| ! | TTAGGCATTGCACTGAGTAA+TGG | - | chr1.1:12137083-12137102 | MS.gene31674:CDS | 40.0% |
| ! | TTTTTCCATACCAGGAAAGG+GGG | - | chr1.1:12135782-12135801 | MS.gene31674:intron | 40.0% |
| !! | AAAAGTGCTGCTTGATCACT+TGG | - | chr1.1:12136221-12136240 | MS.gene31674:CDS | 40.0% |
| !! | AAAGTGCTGCTTGATCACTT+GGG | - | chr1.1:12136222-12136241 | MS.gene31674:CDS | 40.0% |
| !! | AACCAAAGGTGCCTCATTAT+TGG | - | chr1.1:12135550-12135569 | MS.gene31674:intron | 40.0% |
| !! | ACCAAAGGTGCCTCATTATT+GGG | - | chr1.1:12135551-12135570 | MS.gene31674:intron | 40.0% |
| !! | CCTGTATTCCTTTGTCGTTT+TGG | - | chr1.1:12135025-12135044 | MS.gene31674:intron | 40.0% |
| !! | TACCATCTGAACTGTTTTGG+TGG | + | chr1.1:12132924-12132943 | None:intergenic | 40.0% |
| !!! | ACCATCTGAACTGTTTTGGT+GGG | + | chr1.1:12132923-12132942 | None:intergenic | 40.0% |
| !!! | CCATGGCTTGTTACATCTTT+TGG | - | chr1.1:12132765-12132784 | MS.gene31674:intron | 40.0% |
| !!! | TTCTCCTGGGGTTTTTTTAC+AGG | - | chr1.1:12133583-12133602 | MS.gene31674:intron | 40.0% |
| AAAGCTGTGGCAAACGCAAT+TGG | - | chr1.1:12137119-12137138 | MS.gene31674:CDS | 45.0% | |
| AACAGACACAGATTGAGCAG+AGG | - | chr1.1:12134426-12134445 | MS.gene31674:CDS | 45.0% | |
| AACCTCCAGTTCGAAAGGAA+GGG | + | chr1.1:12131164-12131183 | None:intergenic | 45.0% | |
| AAGCAATCCCTGGAATCATG+TGG | + | chr1.1:12134876-12134895 | None:intergenic | 45.0% | |
| AATTGCGTTTGCCACAGCTT+TGG | + | chr1.1:12137120-12137139 | None:intergenic | 45.0% | |
| ATCAGAGAAGACCAAAGCTG+TGG | - | chr1.1:12137106-12137125 | MS.gene31674:CDS | 45.0% | |
| ATGACGCCTCTGATTCTACA+AGG | - | chr1.1:12133632-12133651 | MS.gene31674:intron | 45.0% | |
| CAAGACAAGCAGAGGAAAGA+GGG | - | chr1.1:12132147-12132166 | MS.gene31674:intron | 45.0% | |
| CATGCTGGAAATTGTACCCT+TGG | - | chr1.1:12136176-12136195 | MS.gene31674:CDS | 45.0% | |
| CCCTTCTGTTGAAGATCTTC+TGG | - | chr1.1:12135653-12135672 | MS.gene31674:intron | 45.0% | |
| CCTTACACCACATGATTCCA+GGG | - | chr1.1:12134866-12134885 | MS.gene31674:CDS | 45.0% | |
| CGGATACATTACGTCCATAC+TGG | - | chr1.1:12136106-12136125 | MS.gene31674:CDS | 45.0% | |
| CTGCTATAGATGATGTTGGC+AGG | - | chr1.1:12131839-12131858 | MS.gene31674:CDS | 45.0% | |
| CTTGGGAGTTACTGCTAATG+AGG | - | chr1.1:12136239-12136258 | MS.gene31674:intron | 45.0% | |
| GCAAGTAACCGGATCAAAAC+AGG | + | chr1.1:12131419-12131438 | None:intergenic | 45.0% | |
| GCAGGCATGTCTTTACTCTT+TGG | - | chr1.1:12135434-12135453 | MS.gene31674:intron | 45.0% | |
| GCCAGAAGATCTTCAACAGA+AGG | + | chr1.1:12135657-12135676 | None:intergenic | 45.0% | |
| GCCTGATGATCCTGAAATCT+TGG | - | chr1.1:12130946-12130965 | MS.gene31674:CDS | 45.0% | |
| GCTATGAATGAAGGATGCCA+CGG | - | chr1.1:12134362-12134381 | MS.gene31674:intron | 45.0% | |
| GCTTCGTCTAAATGTCCCAA+TGG | - | chr1.1:12131762-12131781 | MS.gene31674:CDS | 45.0% | |
| GGTACAATTTCCAGCATGTC+TGG | + | chr1.1:12136174-12136193 | None:intergenic | 45.0% | |
| GTAATGTATCCGACACACTC+TGG | + | chr1.1:12136098-12136117 | None:intergenic | 45.0% | |
| GTACCCTTGGGAACATGTAA+AGG | - | chr1.1:12136189-12136208 | MS.gene31674:CDS | 45.0% | |
| GTCTTAACCTCCAGTTCGAA+AGG | + | chr1.1:12131169-12131188 | None:intergenic | 45.0% | |
| GTTCCCTTTACATGTTCCCA+AGG | + | chr1.1:12136196-12136215 | None:intergenic | 45.0% | |
| TAACCTCCAGTTCGAAAGGA+AGG | + | chr1.1:12131165-12131184 | None:intergenic | 45.0% | |
| TCCCACCAAAACAGTTCAGA+TGG | - | chr1.1:12132919-12132938 | MS.gene31674:intron | 45.0% | |
| TCCTTACACCACATGATTCC+AGG | - | chr1.1:12134865-12134884 | MS.gene31674:CDS | 45.0% | |
| TCTCCTATGGTTTAGTGAGG+GGG | - | chr1.1:12131377-12131396 | MS.gene31674:intron | 45.0% | |
| TGATGAGATCCGTATCCTCA+TGG | - | chr1.1:12132181-12132200 | MS.gene31674:intron | 45.0% | |
| TGATGTAGAGATGCTTGAGC+TGG | - | chr1.1:12137055-12137074 | MS.gene31674:CDS | 45.0% | |
| TGCATATCGATAGATGGCGT+CGG | + | chr1.1:12137171-12137190 | None:intergenic | 45.0% | |
| TGGTACAGCTTGAACAACAG+TGG | + | chr1.1:12136154-12136173 | None:intergenic | 45.0% | |
| TGTCCCAATGGCAATGAAAC+TGG | - | chr1.1:12131774-12131793 | MS.gene31674:CDS | 45.0% | |
| ! | ATGCTTGAGCTGGCTTCTTT+AGG | - | chr1.1:12137065-12137084 | MS.gene31674:CDS | 45.0% |
| ! | ATTGAGCAGAGGCATGAGTT+GGG | - | chr1.1:12134437-12134456 | MS.gene31674:CDS | 45.0% |
| ! | CACAAAAGGCTTTCGAGTAG+AGG | + | chr1.1:12134508-12134527 | None:intergenic | 45.0% |
| ! | CTACTCGAAAGCCTTTTGTG+AGG | - | chr1.1:12134508-12134527 | MS.gene31674:intron | 45.0% |
| ! | GTGTGTCAGGGATTTGGTTT+AGG | + | chr1.1:12135145-12135164 | None:intergenic | 45.0% |
| ! | TCCCAATAATGAGGCACCTT+TGG | + | chr1.1:12135555-12135574 | None:intergenic | 45.0% |
| ! | TTGCAGTTGTCTTTGAGGAC+AGG | + | chr1.1:12135971-12135990 | None:intergenic | 45.0% |
| ! | TTTTTGTCCCCTCAGCTCAA+TGG | + | chr1.1:12136511-12136530 | None:intergenic | 45.0% |
| !! | AGCAATTCCAGATAGTGGGT+AGG | - | chr1.1:12134087-12134106 | MS.gene31674:intron | 45.0% |
| !! | GCAATTCCAGATAGTGGGTA+GGG | - | chr1.1:12134088-12134107 | MS.gene31674:intron | 45.0% |
| !!! | ATTTTTTTAGAAATAATATT+TGG | - | chr1.1:12134055-12134074 | MS.gene31674:intron | 5.0% |
| AACGCCGAAGAGGAAGAAGA+AGG | - | chr1.1:12130883-12130902 | MS.gene31674:CDS | 50.0% | |
| ACATGTCATTCCCCCTTTCC+TGG | + | chr1.1:12135795-12135814 | None:intergenic | 50.0% | |
| ACCTCCAGTTCGAAAGGAAG+GGG | + | chr1.1:12131163-12131182 | None:intergenic | 50.0% | |
| AGAGGAAAGAGATGTGCCTC+CGG | + | chr1.1:12134490-12134509 | None:intergenic | 50.0% | |
| AGTCCCCCTCACTAAACCAT+AGG | + | chr1.1:12131383-12131402 | None:intergenic | 50.0% | |
| ATAGAGTAAGATGGAGCCGG+AGG | - | chr1.1:12134471-12134490 | MS.gene31674:CDS | 50.0% | |
| ATGGTTTAGTGAGGGGGACT+CGG | - | chr1.1:12131383-12131402 | MS.gene31674:intron | 50.0% | |
| ATTACCTCTCGACAGACGTC+CGG | + | chr1.1:12134944-12134963 | None:intergenic | 50.0% | |
| CCCTGGAATCATGTGGTGTA+AGG | + | chr1.1:12134869-12134888 | None:intergenic | 50.0% | |
| GAGATCCGTATCCTCATGGT+TGG | - | chr1.1:12132185-12132204 | MS.gene31674:intron | 50.0% | |
| GAGCTGCCTTGTAGAATCAG+AGG | + | chr1.1:12133641-12133660 | None:intergenic | 50.0% | |
| GCAAGACAAGCAGAGGAAAG+AGG | - | chr1.1:12132146-12132165 | MS.gene31674:intron | 50.0% | |
| GCTGCAGAGAACATGTAGGA+TGG | - | chr1.1:12134384-12134403 | MS.gene31674:intron | 50.0% | |
| TCAAGCTGTACCAGACATGC+TGG | - | chr1.1:12136161-12136180 | MS.gene31674:CDS | 50.0% | |
| TCATTCCCCCTTTCCTGGTA+TGG | + | chr1.1:12135790-12135809 | None:intergenic | 50.0% | |
| TCTCTCTTTCCTCCTTCCGT+CGG | + | chr1.1:12130842-12130861 | None:intergenic | 50.0% | |
| TCTGGCATCTGCTGACATAC+AGG | - | chr1.1:12135671-12135690 | MS.gene31674:intron | 50.0% | |
| TCTTCTTCCTCTTCGGCGTT+CGG | + | chr1.1:12130883-12130902 | None:intergenic | 50.0% | |
| TTTGAGAGAGGCCTCAGCAA+GGG | - | chr1.1:12133285-12133304 | MS.gene31674:intron | 50.0% | |
| ! | AATGAGGCACCTTTGGTTCG+TGG | + | chr1.1:12135548-12135567 | None:intergenic | 50.0% |
| ! | AATTTTCACGCCCCTTGCTG+AGG | + | chr1.1:12133299-12133318 | None:intergenic | 50.0% |
| ! | AGCTCACTTGCTGGGATCTA+TGG | - | chr1.1:12135257-12135276 | MS.gene31674:intron | 50.0% |
| ! | ATGGCTATTGAGGGTGTGTC+AGG | + | chr1.1:12135158-12135177 | None:intergenic | 50.0% |
| ! | GATTGAGCAGAGGCATGAGT+TGG | - | chr1.1:12134436-12134455 | MS.gene31674:CDS | 50.0% |
| ! | GGGAACAATGCTTTGAGCAG+TGG | - | chr1.1:12134572-12134591 | MS.gene31674:intron | 50.0% |
| ! | TCGAAAGCCTTTTGTGAGGC+AGG | - | chr1.1:12134512-12134531 | MS.gene31674:intron | 50.0% |
| ! | TGGCTATTGAGGGTGTGTCA+GGG | + | chr1.1:12135157-12135176 | None:intergenic | 50.0% |
| ! | TTGAGGGTGTGTCAGGGATT+TGG | + | chr1.1:12135151-12135170 | None:intergenic | 50.0% |
| !! | AACTGCCAAGGCTTTGAGAG+AGG | - | chr1.1:12133273-12133292 | MS.gene31674:intron | 50.0% |
| ACCCCTTCCTTTCGAACTGG+AGG | - | chr1.1:12131159-12131178 | MS.gene31674:intron | 55.0% | |
| AGACACTGCCCAGAGTGTGT+CGG | - | chr1.1:12136086-12136105 | MS.gene31674:CDS | 55.0% | |
| CACGGCTGCAGAGAACATGT+AGG | - | chr1.1:12134380-12134399 | MS.gene31674:intron | 55.0% | |
| CCATCTCCCTACCCACTATC+TGG | + | chr1.1:12134097-12134116 | None:intergenic | 55.0% | |
| CTACATGTTCTCTGCAGCCG+TGG | + | chr1.1:12134382-12134401 | None:intergenic | 55.0% | |
| GACAGCAGCAAGACAAGCAG+AGG | - | chr1.1:12132139-12132158 | MS.gene31674:intron | 55.0% | |
| GCTGCACGTATTCCCCGAAA+TGG | + | chr1.1:12130820-12130839 | None:intergenic | 55.0% | |
| GGAAGGGGTCCCTCTTCATA+TGG | + | chr1.1:12131148-12131167 | None:intergenic | 55.0% | |
| TGAGGCCTCTCTCAAAGCCT+TGG | + | chr1.1:12133281-12133300 | None:intergenic | 55.0% | |
| TGGTTTAGTGAGGGGGACTC+GGG | - | chr1.1:12131384-12131403 | MS.gene31674:intron | 55.0% | |
| TTGAGAGAGGCCTCAGCAAG+GGG | - | chr1.1:12133286-12133305 | MS.gene31674:intron | 55.0% | |
| ! | CTTTGAGAGAGGCCTCAGCA+AGG | - | chr1.1:12133284-12133303 | MS.gene31674:intron | 55.0% |
| !! | CCAGATAGTGGGTAGGGAGA+TGG | - | chr1.1:12134094-12134113 | MS.gene31674:intron | 55.0% |
| AGATCCGGACGTCTGTCGAG+AGG | - | chr1.1:12134937-12134956 | MS.gene31674:intron | 60.0% | |
| GAATACGTGCAGCCGACGGA+AGG | - | chr1.1:12130827-12130846 | MS.gene31674:CDS | 60.0% | |
| GAGGCAGGTGTGCCCTTGTT+TGG | - | chr1.1:12134527-12134546 | MS.gene31674:intron | 60.0% | |
| GGGACCCCTTCCTTTCGAAC+TGG | - | chr1.1:12131156-12131175 | MS.gene31674:intron | 60.0% | |
| GGGCACACCTGCCTCACAAA+AGG | + | chr1.1:12134522-12134541 | None:intergenic | 60.0% | |
| TCAGAAGCCGAACGCCGAAG+AGG | - | chr1.1:12130873-12130892 | MS.gene31674:CDS | 60.0% | |
| ! | CAGGTGTGCCCTTGTTTGGC+AGG | - | chr1.1:12134531-12134550 | MS.gene31674:intron | 60.0% |
| CGGGGAATACGTGCAGCCGA+CGG | - | chr1.1:12130823-12130842 | MS.gene31674:CDS | 65.0% | |
| TACGTGCAGCCGACGGAAGG+AGG | - | chr1.1:12130830-12130849 | MS.gene31674:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 12130808 | 12137196 | 12130808 | ID=MS.gene31674 |
| chr1.1 | mRNA | 12130808 | 12137196 | 12130808 | ID=MS.gene31674.t1;Parent=MS.gene31674 |
| chr1.1 | exon | 12137037 | 12137196 | 12137037 | ID=MS.gene31674.t1.exon1;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12137037 | 12137196 | 12137037 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12136005 | 12136256 | 12136005 | ID=MS.gene31674.t1.exon2;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12136005 | 12136256 | 12136005 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12135802 | 12135897 | 12135802 | ID=MS.gene31674.t1.exon3;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12135802 | 12135897 | 12135802 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12135064 | 12135241 | 12135064 | ID=MS.gene31674.t1.exon4;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12135064 | 12135241 | 12135064 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12134850 | 12134918 | 12134850 | ID=MS.gene31674.t1.exon5;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12134850 | 12134918 | 12134850 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12134668 | 12134768 | 12134668 | ID=MS.gene31674.t1.exon6;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12134668 | 12134768 | 12134668 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12134400 | 12134492 | 12134400 | ID=MS.gene31674.t1.exon7;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12134400 | 12134492 | 12134400 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12133046 | 12133117 | 12133046 | ID=MS.gene31674.t1.exon8;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12133046 | 12133117 | 12133046 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12132447 | 12132566 | 12132447 | ID=MS.gene31674.t1.exon9;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12132447 | 12132566 | 12132447 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12132312 | 12132362 | 12132312 | ID=MS.gene31674.t1.exon10;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12132312 | 12132362 | 12132312 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12131744 | 12131932 | 12131744 | ID=MS.gene31674.t1.exon11;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12131744 | 12131932 | 12131744 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| chr1.1 | exon | 12130808 | 12130975 | 12130808 | ID=MS.gene31674.t1.exon12;Parent=MS.gene31674.t1 |
| chr1.1 | CDS | 12130808 | 12130975 | 12130808 | ID=cds.MS.gene31674.t1;Parent=MS.gene31674.t1 |
| Gene Sequence |
| Protein sequence |
