Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35867.t1 | XP_003596979.1 | 98.9 | 353 | 4 | 0 | 1 | 353 | 1 | 353 | 1.50E-185 | 658.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35867.t1 | A8MRC7 | 71.1 | 356 | 99 | 1 | 1 | 352 | 1 | 356 | 2.4e-150 | 533.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35867.t1 | G7ITY6 | 98.9 | 353 | 4 | 0 | 1 | 353 | 1 | 353 | 1.1e-185 | 658.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene35867 | 0.803989 | 2.68E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene35867 | 0.840131 | 1.05E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene35867 | 0.837991 | 3.75E-57 | -1.69E-46 |
| MS.gene049404 | MS.gene35867 | 0.807881 | 4.07E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene35867 | 0.852085 | 5.82E-61 | -1.69E-46 |
| MS.gene049647 | MS.gene35867 | 0.819119 | 1.37E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene35867 | 0.8053 | 1.43E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene35867 | 0.809461 | 1.87E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene35867 | 0.830858 | 2.32E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene35867 | 0.812814 | 3.51E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene35867 | 0.814883 | 1.23E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene35867 | 0.865261 | 6.71E-65 | -1.69E-46 |
| MS.gene050605 | MS.gene35867 | 0.802063 | 6.70E-49 | -1.69E-46 |
| MS.gene050629 | MS.gene35867 | -0.805623 | 1.22E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene35867 | 0.826502 | 2.62E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene35867 | 0.803518 | 3.36E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene35867 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene35867 | 0.809201 | 2.13E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene35867 | 0.810632 | 1.05E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene35867 | 0.839161 | 1.87E-57 | -1.69E-46 |
| MS.gene050763 | MS.gene35867 | 0.839284 | 1.74E-57 | -1.69E-46 |
| MS.gene050807 | MS.gene35867 | 0.809789 | 1.59E-50 | -1.69E-46 |
| MS.gene050826 | MS.gene35867 | 0.834702 | 2.57E-56 | -1.69E-46 |
| MS.gene050844 | MS.gene35867 | 0.826242 | 3.02E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene35867 | 0.817686 | 2.90E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene35867 | 0.808006 | 3.83E-50 | -1.69E-46 |
| MS.gene051147 | MS.gene35867 | 0.837069 | 6.46E-57 | -1.69E-46 |
| MS.gene051198 | MS.gene35867 | 0.839012 | 2.04E-57 | -1.69E-46 |
| MS.gene051210 | MS.gene35867 | 0.837411 | 5.28E-57 | -1.69E-46 |
| MS.gene051247 | MS.gene35867 | 0.802255 | 6.12E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene35867 | 0.809529 | 1.81E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene35867 | 0.812497 | 4.12E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene35867 | 0.838534 | 2.72E-57 | -1.69E-46 |
| MS.gene051935 | MS.gene35867 | 0.806976 | 6.33E-50 | -1.69E-46 |
| MS.gene052042 | MS.gene35867 | 0.806424 | 8.28E-50 | -1.69E-46 |
| MS.gene052056 | MS.gene35867 | -0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene35867 | 0.835485 | 1.63E-56 | -1.69E-46 |
| MS.gene052389 | MS.gene35867 | 0.807894 | 4.04E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene35867 | 0.824766 | 6.76E-54 | -1.69E-46 |
| MS.gene052586 | MS.gene35867 | 0.816897 | 4.36E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene35867 | 0.816347 | 5.80E-52 | -1.69E-46 |
| MS.gene052674 | MS.gene35867 | 0.822281 | 2.58E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene35867 | 0.821215 | 4.55E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene35867 | 0.832052 | 1.18E-55 | -1.69E-46 |
| MS.gene052863 | MS.gene35867 | 0.810536 | 1.10E-50 | -1.69E-46 |
| MS.gene05288 | MS.gene35867 | 0.816965 | 4.21E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene35867 | 0.803151 | 4.00E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene35867 | 0.811844 | 5.71E-51 | -1.69E-46 |
| MS.gene053147 | MS.gene35867 | 0.805389 | 1.37E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene35867 | 0.829892 | 3.99E-55 | -1.69E-46 |
| MS.gene053184 | MS.gene35867 | 0.802869 | 4.57E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene35867 | 0.813403 | 2.61E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene35867 | 0.836291 | 1.02E-56 | -1.69E-46 |
| MS.gene054291 | MS.gene35867 | -0.806468 | 8.11E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene35867 | 0.852135 | 5.63E-61 | -1.69E-46 |
| MS.gene054405 | MS.gene35867 | 0.807403 | 5.14E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene35867 | 0.856877 | 2.39E-62 | -1.69E-46 |
| MS.gene054468 | MS.gene35867 | 0.853577 | 2.18E-61 | -1.69E-46 |
| MS.gene054472 | MS.gene35867 | 0.837507 | 4.99E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene35867 | 0.823857 | 1.11E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene35867 | 0.805437 | 1.34E-49 | -1.69E-46 |
| MS.gene05468 | MS.gene35867 | 0.815951 | 7.10E-52 | -1.69E-46 |
| MS.gene054775 | MS.gene35867 | 0.813801 | 2.13E-51 | -1.69E-46 |
| MS.gene054826 | MS.gene35867 | 0.804564 | 2.03E-49 | -1.69E-46 |
| MS.gene054875 | MS.gene35867 | 0.819103 | 1.38E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene35867 | 0.822006 | 2.98E-53 | -1.69E-46 |
| MS.gene05510 | MS.gene35867 | 0.832313 | 1.01E-55 | -1.69E-46 |
| MS.gene055227 | MS.gene35867 | 0.822781 | 1.97E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene35867 | 0.846043 | 2.78E-59 | -1.69E-46 |
| MS.gene055357 | MS.gene35867 | 0.807402 | 5.15E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene35867 | 0.8264 | 2.77E-54 | -1.69E-46 |
| MS.gene055623 | MS.gene35867 | 0.819812 | 9.54E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene35867 | 0.860662 | 1.77E-63 | -1.69E-46 |
| MS.gene055818 | MS.gene35867 | 0.821021 | 5.04E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene35867 | 0.863679 | 2.10E-64 | -1.69E-46 |
| MS.gene05604 | MS.gene35867 | 0.837608 | 4.70E-57 | -1.69E-46 |
| MS.gene056173 | MS.gene35867 | 0.822125 | 2.80E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene35867 | 0.824174 | 9.31E-54 | -1.69E-46 |
| MS.gene056480 | MS.gene35867 | 0.819041 | 1.43E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene35867 | 0.811343 | 7.34E-51 | -1.69E-46 |
| MS.gene056873 | MS.gene35867 | 0.82393 | 1.06E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene35867 | 0.805055 | 1.61E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene35867 | -0.814327 | 1.63E-51 | -1.69E-46 |
| MS.gene057194 | MS.gene35867 | 0.823859 | 1.10E-53 | -1.69E-46 |
| MS.gene057394 | MS.gene35867 | 0.813908 | 2.02E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene35867 | 0.819695 | 1.01E-52 | -1.69E-46 |
| MS.gene057665 | MS.gene35867 | 0.80487 | 1.75E-49 | -1.69E-46 |
| MS.gene057750 | MS.gene35867 | 0.803587 | 3.25E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene35867 | 0.837156 | 6.14E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene35867 | 0.820851 | 5.51E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene35867 | 0.802853 | 4.61E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene35867 | 0.805888 | 1.07E-49 | -1.69E-46 |
| MS.gene058146 | MS.gene35867 | 0.835058 | 2.09E-56 | -1.69E-46 |
| MS.gene058595 | MS.gene35867 | 0.823227 | 1.55E-53 | -1.69E-46 |
| MS.gene058636 | MS.gene35867 | 0.800667 | 1.29E-48 | -1.69E-46 |
| MS.gene05872 | MS.gene35867 | 0.802823 | 4.67E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene35867 | 0.808573 | 2.90E-50 | -1.69E-46 |
| MS.gene05897 | MS.gene35867 | 0.821606 | 3.69E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene35867 | 0.850038 | 2.20E-60 | -1.69E-46 |
| MS.gene059161 | MS.gene35867 | 0.826478 | 2.65E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene35867 | 0.815475 | 9.07E-52 | -1.69E-46 |
| MS.gene059438 | MS.gene35867 | 0.818291 | 2.12E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene35867 | 0.838969 | 2.10E-57 | -1.69E-46 |
| MS.gene059440 | MS.gene35867 | 0.829195 | 5.90E-55 | -1.69E-46 |
| MS.gene059609 | MS.gene35867 | 0.81661 | 5.06E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene35867 | 0.80115 | 1.03E-48 | -1.69E-46 |
| MS.gene059725 | MS.gene35867 | 0.836256 | 1.04E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene35867 | 0.83205 | 1.18E-55 | -1.69E-46 |
| MS.gene059952 | MS.gene35867 | 0.814478 | 1.51E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene35867 | 0.838548 | 2.69E-57 | -1.69E-46 |
| MS.gene060137 | MS.gene35867 | -0.806829 | 6.80E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene35867 | 0.827116 | 1.87E-54 | -1.69E-46 |
| MS.gene060310 | MS.gene35867 | 0.800268 | 1.56E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene35867 | 0.869379 | 3.24E-66 | -1.69E-46 |
| MS.gene06052 | MS.gene35867 | 0.856904 | 2.35E-62 | -1.69E-46 |
| MS.gene060637 | MS.gene35867 | 0.805648 | 1.21E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene35867 | 0.857004 | 2.19E-62 | -1.69E-46 |
| MS.gene060685 | MS.gene35867 | 0.855741 | 5.15E-62 | -1.69E-46 |
| MS.gene060802 | MS.gene35867 | 0.863616 | 2.19E-64 | -1.69E-46 |
| MS.gene060803 | MS.gene35867 | 0.854478 | 1.20E-61 | -1.69E-46 |
| MS.gene060998 | MS.gene35867 | 0.876321 | 1.53E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35867.t1 | MTR_2g088270 | 98.584 | 353 | 5 | 0 | 1 | 353 | 1 | 353 | 0.0 | 728 |
| MS.gene35867.t1 | MTR_4g048320 | 78.371 | 356 | 73 | 1 | 1 | 352 | 1 | 356 | 0.0 | 609 |
| MS.gene35867.t1 | MTR_4g048320 | 80.277 | 289 | 53 | 1 | 68 | 352 | 10 | 298 | 7.01e-180 | 502 |
| MS.gene35867.t1 | MTR_3g073370 | 59.292 | 339 | 134 | 2 | 15 | 352 | 9 | 344 | 9.51e-154 | 438 |
| MS.gene35867.t1 | MTR_4g013305 | 60.000 | 345 | 110 | 3 | 8 | 352 | 11 | 327 | 1.89e-153 | 436 |
| MS.gene35867.t1 | MTR_3g073370 | 59.118 | 340 | 134 | 3 | 15 | 352 | 9 | 345 | 5.42e-152 | 433 |
| MS.gene35867.t1 | MTR_4g035490 | 53.254 | 338 | 145 | 3 | 16 | 352 | 7 | 332 | 6.85e-133 | 384 |
| MS.gene35867.t1 | MTR_5g009700 | 47.368 | 266 | 132 | 3 | 88 | 352 | 74 | 332 | 1.69e-83 | 257 |
| MS.gene35867.t1 | MTR_3g090600 | 48.846 | 260 | 125 | 4 | 94 | 352 | 80 | 332 | 1.52e-81 | 252 |
| MS.gene35867.t1 | MTR_5g009700 | 47.826 | 253 | 124 | 3 | 101 | 352 | 1 | 246 | 1.83e-81 | 249 |
| MS.gene35867.t1 | MTR_3g090600 | 48.846 | 260 | 123 | 5 | 94 | 352 | 80 | 330 | 5.78e-80 | 248 |
| MS.gene35867.t1 | MTR_1g012800 | 44.318 | 264 | 136 | 5 | 90 | 352 | 83 | 336 | 1.95e-70 | 224 |
| MS.gene35867.t1 | MTR_3g090600 | 48.085 | 235 | 111 | 5 | 94 | 324 | 80 | 307 | 2.78e-65 | 209 |
| MS.gene35867.t1 | MTR_3g090600 | 48.085 | 235 | 109 | 6 | 94 | 324 | 80 | 305 | 1.33e-63 | 205 |
| MS.gene35867.t1 | MTR_8g463930 | 35.714 | 224 | 137 | 4 | 128 | 349 | 77 | 295 | 5.01e-44 | 155 |
| MS.gene35867.t1 | MTR_2g078030 | 35.043 | 234 | 142 | 5 | 125 | 353 | 68 | 296 | 2.00e-43 | 153 |
| MS.gene35867.t1 | MTR_2g078030 | 35.043 | 234 | 142 | 5 | 125 | 353 | 68 | 296 | 2.09e-43 | 152 |
| MS.gene35867.t1 | MTR_5g041210 | 25.769 | 260 | 169 | 6 | 100 | 346 | 343 | 591 | 1.76e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35867.t1 | AT1G05170 | 75.281 | 356 | 84 | 1 | 1 | 352 | 1 | 356 | 0.0 | 587 |
| MS.gene35867.t1 | AT1G05170 | 75.281 | 356 | 84 | 1 | 1 | 352 | 1 | 356 | 0.0 | 583 |
| MS.gene35867.t1 | AT2G32430 | 72.905 | 358 | 91 | 3 | 1 | 352 | 1 | 358 | 0.0 | 534 |
| MS.gene35867.t1 | AT4G26940 | 71.098 | 346 | 93 | 2 | 12 | 353 | 16 | 358 | 0.0 | 513 |
| MS.gene35867.t1 | AT1G11730 | 61.625 | 357 | 110 | 5 | 1 | 353 | 1 | 334 | 3.07e-160 | 454 |
| MS.gene35867.t1 | AT1G77810 | 59.827 | 346 | 119 | 5 | 10 | 352 | 5 | 333 | 2.38e-150 | 429 |
| MS.gene35867.t1 | AT1G32930 | 59.531 | 341 | 133 | 2 | 13 | 352 | 12 | 348 | 7.20e-150 | 428 |
| MS.gene35867.t1 | AT1G77810 | 59.312 | 349 | 119 | 6 | 10 | 352 | 5 | 336 | 2.86e-148 | 424 |
| MS.gene35867.t1 | AT1G33430 | 57.602 | 342 | 134 | 7 | 16 | 352 | 7 | 342 | 1.57e-131 | 381 |
| MS.gene35867.t1 | AT1G22015 | 53.801 | 342 | 146 | 4 | 15 | 352 | 11 | 344 | 1.39e-129 | 377 |
| MS.gene35867.t1 | AT1G33430 | 56.286 | 350 | 134 | 8 | 16 | 352 | 7 | 350 | 2.55e-128 | 374 |
| MS.gene35867.t1 | AT4G26940 | 67.658 | 269 | 80 | 2 | 12 | 276 | 16 | 281 | 2.22e-126 | 365 |
| MS.gene35867.t1 | AT1G33430 | 56.169 | 308 | 124 | 7 | 16 | 318 | 7 | 308 | 3.32e-110 | 324 |
| MS.gene35867.t1 | AT5G53340 | 47.876 | 259 | 125 | 5 | 94 | 350 | 76 | 326 | 1.07e-82 | 255 |
| MS.gene35867.t1 | AT5G53340 | 47.876 | 259 | 125 | 5 | 94 | 350 | 76 | 326 | 1.16e-82 | 254 |
| MS.gene35867.t1 | AT4G32120 | 44.151 | 265 | 136 | 5 | 90 | 353 | 83 | 336 | 5.34e-71 | 225 |
| MS.gene35867.t1 | AT2G25300 | 43.985 | 266 | 133 | 5 | 90 | 352 | 6 | 258 | 7.03e-71 | 222 |
| MS.gene35867.t1 | AT2G25300 | 43.985 | 266 | 133 | 5 | 90 | 352 | 84 | 336 | 7.69e-70 | 222 |
| MS.gene35867.t1 | AT2G26100 | 37.838 | 222 | 129 | 5 | 131 | 349 | 107 | 322 | 2.01e-45 | 159 |
| MS.gene35867.t1 | AT2G26100 | 37.104 | 221 | 132 | 4 | 131 | 349 | 107 | 322 | 3.10e-45 | 159 |
| MS.gene35867.t1 | AT3G14960 | 35.747 | 221 | 135 | 4 | 131 | 349 | 81 | 296 | 7.37e-44 | 154 |
| MS.gene35867.t1 | AT1G53290 | 35.242 | 227 | 140 | 4 | 125 | 349 | 77 | 298 | 6.65e-43 | 152 |
Find 64 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTAGGAGCTTGGTTTAT+TGG | 0.181423 | 2.1:+13229414 | MS.gene35867:CDS |
| AGACAAGACTATTTCAAATT+TGG | 0.187361 | 2.1:+13227717 | MS.gene35867:CDS |
| ATTATCATCCGCTTTGTAAT+TGG | 0.210456 | 2.1:+13228248 | MS.gene35867:CDS |
| GAACCAGAATACTGGAAATT+TGG | 0.236437 | 2.1:+13229193 | MS.gene35867:CDS |
| TCACCAAATTTCCAGTATTC+TGG | 0.244223 | 2.1:-13229196 | None:intergenic |
| ATTTCCAGTATTCTGGTTCA+TGG | 0.346108 | 2.1:-13229189 | None:intergenic |
| GTTGTCCTCGCAAGTCCTTT+AGG | 0.352932 | 2.1:-13227404 | None:intergenic |
| TGCTACTGCTGTTAACTTGT+GGG | 0.357057 | 2.1:+13228708 | MS.gene35867:CDS |
| GACTATTTCAAATTTGGAAA+TGG | 0.359715 | 2.1:+13227723 | MS.gene35867:CDS |
| GCAAATGAGGATGTTTCATT+AGG | 0.363722 | 2.1:+13229399 | MS.gene35867:CDS |
| CTCGCAAGTCCTTTAGGTTC+AGG | 0.363890 | 2.1:-13227398 | None:intergenic |
| AGAAGGTACCTAATGGTTAT+AGG | 0.369031 | 2.1:+13227835 | MS.gene35867:CDS |
| TTGTCTTTGCTGATAATTCA+AGG | 0.373953 | 2.1:-13228675 | None:intergenic |
| ATCTTCATATCTTCTGATAC+AGG | 0.403107 | 2.1:-13227793 | None:intergenic |
| ACATGGAGATTTCCTGAGAT+TGG | 0.407780 | 2.1:+13228532 | MS.gene35867:CDS |
| GAGATTCCGTTCGCGCCACT+TGG | 0.410674 | 2.1:+13227890 | MS.gene35867:CDS |
| TGAGAAAAGAAAGAAGTTAG+AGG | 0.413201 | 2.1:+13228214 | MS.gene35867:CDS |
| TGTTAATTCCTATAACCATT+AGG | 0.414080 | 2.1:-13227843 | None:intergenic |
| TACTGGAAATTTGGTGAGAC+AGG | 0.417346 | 2.1:+13229202 | MS.gene35867:CDS |
| TACATCGGATGCATGAAATC+TGG | 0.429775 | 2.1:+13229034 | MS.gene35867:CDS |
| GTTAACAGCAGTAGCAAAGT+AGG | 0.436177 | 2.1:-13228701 | None:intergenic |
| CTGCCTCAATAGCTCGATCT+AGG | 0.448168 | 2.1:-13228499 | None:intergenic |
| AAAGAAGTTAGAGGAAGAGA+AGG | 0.449533 | 2.1:+13228223 | MS.gene35867:CDS |
| GATGATGTTCATGTAAATAT+AGG | 0.452270 | 2.1:+13228757 | MS.gene35867:CDS |
| GGTACCATGAACCAGAATAC+TGG | 0.454852 | 2.1:+13229185 | MS.gene35867:CDS |
| AGGATGTTTCATTAGGAGCT+TGG | 0.461834 | 2.1:+13229406 | MS.gene35867:CDS |
| ATCCGCTTTGTAATTGGTCA+TGG | 0.467305 | 2.1:+13228254 | MS.gene35867:CDS |
| AGATAAGTGAATCAACTGTT+AGG | 0.471693 | 2.1:+13227812 | MS.gene35867:CDS |
| AGACTATGCTGTGGTACAAC+AGG | 0.477338 | 2.1:+13229465 | MS.gene35867:CDS |
| AAGTGATCATTACCAATCTC+AGG | 0.483099 | 2.1:-13228544 | None:intergenic |
| TTGCTACTGCTGTTAACTTG+TGG | 0.487451 | 2.1:+13228707 | MS.gene35867:CDS |
| TGTATTGGAAGCTTCTGTGC+TGG | 0.490184 | 2.1:+13226184 | MS.gene35867:CDS |
| AAAATTCTTGCAGAGGAGTA+AGG | 0.491081 | 2.1:+13229164 | MS.gene35867:intron |
| TGGCATCCAAGTGGCGCGAA+CGG | 0.528936 | 2.1:-13227896 | None:intergenic |
| TGTTAGGAGAAGGTACCTAA+TGG | 0.531626 | 2.1:+13227828 | MS.gene35867:CDS |
| CGCGCCACTTGGATGCCACA+AGG | 0.537211 | 2.1:+13227901 | MS.gene35867:CDS |
| AAGTACTTTCGTCATGCGAC+AGG | 0.539105 | 2.1:+13229229 | MS.gene35867:CDS |
| TTCTCTAGTGCCACGACAGG+TGG | 0.546041 | 2.1:+13228473 | MS.gene35867:intron |
| TGGACTATTCCTGAACCTAA+AGG | 0.548621 | 2.1:+13227389 | MS.gene35867:CDS |
| TCCGCTTTGTAATTGGTCAT+GGG | 0.549475 | 2.1:+13228255 | MS.gene35867:CDS |
| AAGAAGTTAGAGGAAGAGAA+GGG | 0.551717 | 2.1:+13228224 | MS.gene35867:CDS |
| ATTGTGCAGGATCATGTTGA+AGG | 0.557008 | 2.1:+13228649 | MS.gene35867:intron |
| TTGGTTTATTGGTCTTGATG+TGG | 0.560157 | 2.1:+13229425 | MS.gene35867:CDS |
| CCTTTCTCTAGTGCCACGAC+AGG | 0.562439 | 2.1:+13228470 | MS.gene35867:intron |
| TCTTCACAAGTATGCAAATG+AGG | 0.564981 | 2.1:+13229386 | MS.gene35867:CDS |
| TATCCTAGATCGAGCTATTG+AGG | 0.566969 | 2.1:+13228496 | MS.gene35867:CDS |
| CAATTAAATTTAGTTACAGA+GGG | 0.567403 | 2.1:+13227443 | MS.gene35867:CDS |
| AAGCAAATAAAGCTATGACT+TGG | 0.572489 | 2.1:+13226101 | None:intergenic |
| CGGATGCATGAAATCTGGAC+CGG | 0.576274 | 2.1:+13229039 | MS.gene35867:CDS |
| TCTTCTTTAGTTGCAAGAGA+AGG | 0.590624 | 2.1:+13227554 | MS.gene35867:intron |
| GTGAATCAACTGTTAGGAGA+AGG | 0.596720 | 2.1:+13227818 | MS.gene35867:CDS |
| ACAATTAAATTTAGTTACAG+AGG | 0.607776 | 2.1:+13227442 | MS.gene35867:CDS |
| ATGCATCCGATGTATACTCG+TGG | 0.617141 | 2.1:-13229025 | None:intergenic |
| ACTTGCGAGGACAACAGCAA+TGG | 0.618474 | 2.1:+13227412 | MS.gene35867:CDS |
| GCTATGACTTGGAAAAGTAG+AGG | 0.624639 | 2.1:+13226112 | None:intergenic |
| GACTTGGAAAAGTAGAGGAG+AGG | 0.626837 | 2.1:+13226117 | MS.gene35867:CDS |
| ATCTAGGATACCACCTGTCG+TGG | 0.640845 | 2.1:-13228483 | None:intergenic |
| GAGGCAGAAGATAGTAAACA+TGG | 0.646324 | 2.1:+13228515 | MS.gene35867:CDS |
| GAAGTGAAGCGCGATACGAA+AGG | 0.667111 | 2.1:+13227576 | MS.gene35867:CDS |
| ACCCATGACCAATTACAAAG+CGG | 0.684488 | 2.1:-13228256 | None:intergenic |
| GATGATCGTAGACTATGCTG+TGG | 0.703632 | 2.1:+13229456 | MS.gene35867:CDS |
| TGAACCTTGTGGCATCCAAG+TGG | 0.703947 | 2.1:-13227905 | None:intergenic |
| GCAAAACCACGAGTATACAT+CGG | 0.705929 | 2.1:+13229019 | MS.gene35867:CDS |
| CTGAACCTAAAGGACTTGCG+AGG | 0.714939 | 2.1:+13227399 | MS.gene35867:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAACTCAAAAATATA+AGG | - | chr2.1:13227948-13227967 | None:intergenic | 10.0% |
| !!! | ATCACTATTTTATAATAATT+AGG | - | chr2.1:13227112-13227131 | None:intergenic | 10.0% |
| !!! | ATTTTTTATATAAGCTATAT+AGG | + | chr2.1:13228807-13228826 | MS.gene35867:intron | 10.0% |
| !! | TATAATTGAAGTGAAATTAA+TGG | + | chr2.1:13229337-13229356 | MS.gene35867:intron | 15.0% |
| !! | TGAGATTATATATATGATAA+TGG | - | chr2.1:13226950-13226969 | None:intergenic | 15.0% |
| !! | TTTAAACCAAAAATTGTTAA+TGG | - | chr2.1:13226720-13226739 | None:intergenic | 15.0% |
| !!! | TAGAAAAATCAAGTTTTTAT+TGG | - | chr2.1:13226549-13226568 | None:intergenic | 15.0% |
| !!! | TTTGATGTTTTATTTAACAT+AGG | + | chr2.1:13227158-13227177 | MS.gene35867:intron | 15.0% |
| !! | AAAAGACCTAAAAAATAAGT+TGG | - | chr2.1:13227138-13227157 | None:intergenic | 20.0% |
| !! | AATAGTATGATATGATAAGA+TGG | - | chr2.1:13228015-13228034 | None:intergenic | 20.0% |
| !! | ACAATTAAATTTAGTTACAG+AGG | + | chr2.1:13227442-13227461 | MS.gene35867:CDS | 20.0% |
| !! | ATAAGATGGTAATATATGAA+TGG | - | chr2.1:13228001-13228020 | None:intergenic | 20.0% |
| !! | CAATCATCAATAAAAAAAAC+AGG | - | chr2.1:13226267-13226286 | None:intergenic | 20.0% |
| !! | CAATTAAATTTAGTTACAGA+GGG | + | chr2.1:13227443-13227462 | MS.gene35867:CDS | 20.0% |
| !! | GGAACTAAATTCATAAAAAT+TGG | - | chr2.1:13226459-13226478 | None:intergenic | 20.0% |
| !! | GTTAAATAAAAGATGGATAA+AGG | - | chr2.1:13229092-13229111 | None:intergenic | 20.0% |
| !! | TCAATGAAAAACAAAGTTTA+AGG | - | chr2.1:13226432-13226451 | None:intergenic | 20.0% |
| !!! | AAAAATCAAGTTTTTATTGG+TGG | - | chr2.1:13226546-13226565 | None:intergenic | 20.0% |
| !!! | ATAGATGGATCTTTTATTTT+TGG | + | chr2.1:13227080-13227099 | MS.gene35867:intron | 20.0% |
| !!! | ATGTTTTATTTAACATAGGA+TGG | + | chr2.1:13227162-13227181 | MS.gene35867:intron | 20.0% |
| !!! | ATTTTTACTTCATAAGTAAG+AGG | - | chr2.1:13229318-13229337 | None:intergenic | 20.0% |
| !!! | CTCTTTTGTTAAATAAAAGA+TGG | - | chr2.1:13229099-13229118 | None:intergenic | 20.0% |
| !!! | TAGATGGATCTTTTATTTTT+GGG | + | chr2.1:13227081-13227100 | MS.gene35867:intron | 20.0% |
| !!! | TGTAATATAAGATTTTCATG+TGG | - | chr2.1:13227188-13227207 | None:intergenic | 20.0% |
| !!! | TTTAAGCCATTAACAATTTT+TGG | + | chr2.1:13226711-13226730 | MS.gene35867:intron | 20.0% |
| !!! | TTTATAAACTATTGATTCTC+TGG | + | chr2.1:13228172-13228191 | MS.gene35867:intron | 20.0% |
| ! | AAGAAATTTATATGTGTGAC+AGG | + | chr2.1:13227363-13227382 | MS.gene35867:intron | 25.0% |
| ! | AATTGAGAGATATTAAGATG+AGG | - | chr2.1:13226814-13226833 | None:intergenic | 25.0% |
| ! | ACGTATGTGTAAAATGTTAT+CGG | - | chr2.1:13227978-13227997 | None:intergenic | 25.0% |
| ! | AGACAAGACTATTTCAAATT+TGG | + | chr2.1:13227717-13227736 | MS.gene35867:CDS | 25.0% |
| ! | GACTATTTCAAATTTGGAAA+TGG | + | chr2.1:13227723-13227742 | MS.gene35867:CDS | 25.0% |
| ! | GATGATGTTCATGTAAATAT+AGG | + | chr2.1:13228757-13228776 | MS.gene35867:CDS | 25.0% |
| ! | TATATAATCTCACTCATCAA+TGG | + | chr2.1:13226958-13226977 | MS.gene35867:intron | 25.0% |
| ! | TGTTAATTCCTATAACCATT+AGG | - | chr2.1:13227846-13227865 | None:intergenic | 25.0% |
| ! | TTCTGATGGAACATAAAATA+GGG | - | chr2.1:13226649-13226668 | None:intergenic | 25.0% |
| ! | TTGCTGAAAATAGATTGAAT+TGG | - | chr2.1:13228970-13228989 | None:intergenic | 25.0% |
| ! | TTTCGAAGAGATTATAGAAA+CGG | - | chr2.1:13228892-13228911 | None:intergenic | 25.0% |
| !! | TTGAAATGTTGATAGATAGA+TGG | + | chr2.1:13227065-13227084 | MS.gene35867:intron | 25.0% |
| !! | TTTTGTGAACATTTAATCAC+TGG | + | chr2.1:13226832-13226851 | MS.gene35867:intron | 25.0% |
| !!! | GATAGTCCAACTTATTTTTT+AGG | + | chr2.1:13227129-13227148 | MS.gene35867:intron | 25.0% |
| !!! | TTTTTAAGCTTAGAAAACCA+TGG | - | chr2.1:13226306-13226325 | None:intergenic | 25.0% |
| AAAAACACCACAATAACTCA+AGG | - | chr2.1:13227338-13227357 | None:intergenic | 30.0% | |
| AAGAAAATTCATGTACCTGT+TGG | - | chr2.1:13226221-13226240 | None:intergenic | 30.0% | |
| AATTCATTATTAGGTGTCAG+AGG | - | chr2.1:13226993-13227012 | None:intergenic | 30.0% | |
| ACTAAACTCGAGATAGTTAT+AGG | - | chr2.1:13228319-13228338 | None:intergenic | 30.0% | |
| AGATAAGTGAATCAACTGTT+AGG | + | chr2.1:13227812-13227831 | MS.gene35867:CDS | 30.0% | |
| AGATGTGCCAATTCATTATT+AGG | - | chr2.1:13227002-13227021 | None:intergenic | 30.0% | |
| ATCCATTTCATTTCTTCTGA+TGG | - | chr2.1:13226663-13226682 | None:intergenic | 30.0% | |
| ATCTTCATATCTTCTGATAC+AGG | - | chr2.1:13227796-13227815 | None:intergenic | 30.0% | |
| ATTATCATCCGCTTTGTAAT+TGG | + | chr2.1:13228248-13228267 | MS.gene35867:CDS | 30.0% | |
| CATATTTCCATAAATTCTCG+TGG | - | chr2.1:13228840-13228859 | None:intergenic | 30.0% | |
| CTTCTGATGGAACATAAAAT+AGG | - | chr2.1:13226650-13226669 | None:intergenic | 30.0% | |
| GGAACTAAGCTCATAAAAAT+TGG | - | chr2.1:13226579-13226598 | None:intergenic | 30.0% | |
| GTTATATGTAACTCACTGTA+TGG | - | chr2.1:13227622-13227641 | None:intergenic | 30.0% | |
| TATTGGTGGAACATAAGATA+GGG | - | chr2.1:13226532-13226551 | None:intergenic | 30.0% | |
| TCATAAGTAAGAGGAAAAAG+TGG | - | chr2.1:13229309-13229328 | None:intergenic | 30.0% | |
| TCTGACACCTAATAATGAAT+TGG | + | chr2.1:13226992-13227011 | MS.gene35867:intron | 30.0% | |
| TCTGATGGAACATAAAATAG+GGG | - | chr2.1:13226648-13226667 | None:intergenic | 30.0% | |
| TGACTCAAATGAATTAGCAA+TGG | - | chr2.1:13226392-13226411 | None:intergenic | 30.0% | |
| TGAGAAAAGAAAGAAGTTAG+AGG | + | chr2.1:13228214-13228233 | MS.gene35867:CDS | 30.0% | |
| TGCTAATTCATTTGAGTCAT+TGG | + | chr2.1:13226393-13226412 | MS.gene35867:intron | 30.0% | |
| TTATTGGTGGAACATAAGAT+AGG | - | chr2.1:13226533-13226552 | None:intergenic | 30.0% | |
| TTCCATCAGAAGAAATGAAA+TGG | + | chr2.1:13226658-13226677 | MS.gene35867:intron | 30.0% | |
| TTGAAACTATAGAGATGAGA+TGG | - | chr2.1:13228285-13228304 | None:intergenic | 30.0% | |
| TTGTCTTTGCTGATAATTCA+AGG | - | chr2.1:13228678-13228697 | None:intergenic | 30.0% | |
| TTTGTTTCCACGAGAATTTA+TGG | + | chr2.1:13228830-13228849 | MS.gene35867:intron | 30.0% | |
| ! | AATCTATTTTCAGCAACACT+CGG | + | chr2.1:13228974-13228993 | MS.gene35867:intron | 30.0% |
| ! | GAAGCTTTATGTCTCAAAAA+TGG | + | chr2.1:13226149-13226168 | MS.gene35867:CDS | 30.0% |
| ! | TGGATCTGAAATGAATTGAT+TGG | + | chr2.1:13226678-13226697 | MS.gene35867:intron | 30.0% |
| ! | TGGATGATTTTCTTGTGTAT+TGG | + | chr2.1:13226169-13226188 | MS.gene35867:CDS | 30.0% |
| !! | GCTTTATTATGTGTTTTCCA+TGG | + | chr2.1:13226286-13226305 | MS.gene35867:intron | 30.0% |
| !! | GTATGATCCTATTGATTTGA+AGG | + | chr2.1:13228587-13228606 | MS.gene35867:intron | 30.0% |
| !! | TAGAATTGACTTGACATTGA+GGG | - | chr2.1:13226767-13226786 | None:intergenic | 30.0% |
| !! | TCATAAGAGTATTCTATCAC+TGG | + | chr2.1:13226362-13226381 | MS.gene35867:intron | 30.0% |
| !!! | AATTTGTGTTTTGATTGTGC+AGG | + | chr2.1:13228636-13228655 | MS.gene35867:intron | 30.0% |
| !!! | TTTTGAGACATAAAGCTTCT+AGG | - | chr2.1:13226148-13226167 | None:intergenic | 30.0% |
| AAAATTCTTGCAGAGGAGTA+AGG | + | chr2.1:13229164-13229183 | MS.gene35867:intron | 35.0% | |
| AAAGAAGTTAGAGGAAGAGA+AGG | + | chr2.1:13228223-13228242 | MS.gene35867:CDS | 35.0% | |
| AAAGTGTGCACAAGAATAGA+AGG | - | chr2.1:13228155-13228174 | None:intergenic | 35.0% | |
| AAGAAGTTAGAGGAAGAGAA+GGG | + | chr2.1:13228224-13228243 | MS.gene35867:CDS | 35.0% | |
| AAGTGATCATTACCAATCTC+AGG | - | chr2.1:13228547-13228566 | None:intergenic | 35.0% | |
| ACATGTCAAAATTCTTGCAG+AGG | + | chr2.1:13229157-13229176 | MS.gene35867:intron | 35.0% | |
| AGATAGGGTGAGAAAGTTTA+AGG | - | chr2.1:13226517-13226536 | None:intergenic | 35.0% | |
| CTGATGGAACATAAAATAGG+GGG | - | chr2.1:13226647-13226666 | None:intergenic | 35.0% | |
| CTTTCCTCCTTCAAATCAAT+AGG | - | chr2.1:13228597-13228616 | None:intergenic | 35.0% | |
| GAACCAGAATACTGGAAATT+TGG | + | chr2.1:13229193-13229212 | MS.gene35867:CDS | 35.0% | |
| GAGAGATATTAAGATGAGGT+TGG | - | chr2.1:13226810-13226829 | None:intergenic | 35.0% | |
| GCAAATGAGGATGTTTCATT+AGG | + | chr2.1:13229399-13229418 | MS.gene35867:CDS | 35.0% | |
| TCACCAAATTTCCAGTATTC+TGG | - | chr2.1:13229199-13229218 | None:intergenic | 35.0% | |
| TCATTAGGAGCTTGGTTTAT+TGG | + | chr2.1:13229414-13229433 | MS.gene35867:CDS | 35.0% | |
| TCTTCACAAGTATGCAAATG+AGG | + | chr2.1:13229386-13229405 | MS.gene35867:CDS | 35.0% | |
| TCTTCTTTAGTTGCAAGAGA+AGG | + | chr2.1:13227554-13227573 | MS.gene35867:intron | 35.0% | |
| TGATCGAATTATGAACCTTG+TGG | - | chr2.1:13227919-13227938 | None:intergenic | 35.0% | |
| TTTATATGTGTGACAGGATG+TGG | + | chr2.1:13227369-13227388 | MS.gene35867:intron | 35.0% | |
| !! | AGAAGGTACCTAATGGTTAT+AGG | + | chr2.1:13227835-13227854 | MS.gene35867:CDS | 35.0% |
| !! | ATTTCCAGTATTCTGGTTCA+TGG | - | chr2.1:13229192-13229211 | None:intergenic | 35.0% |
| !! | CTAGAATTGACTTGACATTG+AGG | - | chr2.1:13226768-13226787 | None:intergenic | 35.0% |
| !! | TGATCCTATTGATTTGAAGG+AGG | + | chr2.1:13228590-13228609 | MS.gene35867:intron | 35.0% |
| !! | TTGGTTTATTGGTCTTGATG+TGG | + | chr2.1:13229425-13229444 | MS.gene35867:CDS | 35.0% |
| ACATGGAGATTTCCTGAGAT+TGG | + | chr2.1:13228532-13228551 | MS.gene35867:CDS | 40.0% | |
| ACCCATGACCAATTACAAAG+CGG | - | chr2.1:13228259-13228278 | None:intergenic | 40.0% | |
| AGGATGTTTCATTAGGAGCT+TGG | + | chr2.1:13229406-13229425 | MS.gene35867:CDS | 40.0% | |
| ATCCGCTTTGTAATTGGTCA+TGG | + | chr2.1:13228254-13228273 | MS.gene35867:CDS | 40.0% | |
| ATTGTGCAGGATCATGTTGA+AGG | + | chr2.1:13228649-13228668 | MS.gene35867:intron | 40.0% | |
| CATGGTACCTTGAGTTATTG+TGG | + | chr2.1:13227328-13227347 | MS.gene35867:intron | 40.0% | |
| GAGGCAGAAGATAGTAAACA+TGG | + | chr2.1:13228515-13228534 | MS.gene35867:CDS | 40.0% | |
| GCAAAACCACGAGTATACAT+CGG | + | chr2.1:13229019-13229038 | MS.gene35867:CDS | 40.0% | |
| GGACTTTGTGTGTATGTGTT+AGG | + | chr2.1:13229358-13229377 | MS.gene35867:intron | 40.0% | |
| GTGAATCAACTGTTAGGAGA+AGG | + | chr2.1:13227818-13227837 | MS.gene35867:CDS | 40.0% | |
| GTTAACAGCAGTAGCAAAGT+AGG | - | chr2.1:13228704-13228723 | None:intergenic | 40.0% | |
| TACATCGGATGCATGAAATC+TGG | + | chr2.1:13229034-13229053 | MS.gene35867:CDS | 40.0% | |
| TATCCTAGATCGAGCTATTG+AGG | + | chr2.1:13228496-13228515 | MS.gene35867:CDS | 40.0% | |
| TCCGCTTTGTAATTGGTCAT+GGG | + | chr2.1:13228255-13228274 | MS.gene35867:CDS | 40.0% | |
| TGGACTATTCCTGAACCTAA+AGG | + | chr2.1:13227389-13227408 | MS.gene35867:CDS | 40.0% | |
| TTGATTCTCTGGTGACATCT+TGG | + | chr2.1:13228183-13228202 | MS.gene35867:intron | 40.0% | |
| ! | CACAATAACTCAAGGTACCA+TGG | - | chr2.1:13227330-13227349 | None:intergenic | 40.0% |
| ! | CTGGAATGTTTTTCACCAAC+AGG | + | chr2.1:13226203-13226222 | MS.gene35867:CDS | 40.0% |
| ! | GCTCAAGAGTCTCTAAAAAG+TGG | + | chr2.1:13227766-13227785 | MS.gene35867:CDS | 40.0% |
| ! | GCTTTGTTACCAACTTACCA+TGG | + | chr2.1:13227310-13227329 | MS.gene35867:intron | 40.0% |
| ! | TACTGGAAATTTGGTGAGAC+AGG | + | chr2.1:13229202-13229221 | MS.gene35867:CDS | 40.0% |
| ! | TTGCTACTGCTGTTAACTTG+TGG | + | chr2.1:13228707-13228726 | MS.gene35867:CDS | 40.0% |
| !! | TCTCACTTTTGAGCAAGAAC+CGG | - | chr2.1:13229061-13229080 | None:intergenic | 40.0% |
| !! | TGCTACTGCTGTTAACTTGT+GGG | + | chr2.1:13228708-13228727 | MS.gene35867:CDS | 40.0% |
| !! | TGTTAGGAGAAGGTACCTAA+TGG | + | chr2.1:13227828-13227847 | MS.gene35867:CDS | 40.0% |
| AAGTACTTTCGTCATGCGAC+AGG | + | chr2.1:13229229-13229248 | MS.gene35867:CDS | 45.0% | |
| ATGCATCCGATGTATACTCG+TGG | - | chr2.1:13229028-13229047 | None:intergenic | 45.0% | |
| CTGGTGACATCTTGGAAAAC+AGG | + | chr2.1:13228191-13228210 | MS.gene35867:intron | 45.0% | |
| GACTTGGAAAAGTAGAGGAG+AGG | + | chr2.1:13226117-13226136 | MS.gene35867:CDS | 45.0% | |
| GATGATCGTAGACTATGCTG+TGG | + | chr2.1:13229456-13229475 | MS.gene35867:CDS | 45.0% | |
| GGTACCATGAACCAGAATAC+TGG | + | chr2.1:13229185-13229204 | MS.gene35867:CDS | 45.0% | |
| TGTATTGGAAGCTTCTGTGC+TGG | + | chr2.1:13226184-13226203 | MS.gene35867:CDS | 45.0% | |
| ! | CTCAAGGTACCATGGTAAGT+TGG | - | chr2.1:13227322-13227341 | None:intergenic | 45.0% |
| !! | AAAAATCATATAATATTTAA+AGG | - | chr2.1:13226480-13226499 | None:intergenic | 5.0% |
| !! | TTAAAAATCATATAATATAA+AGG | - | chr2.1:13226600-13226619 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTAGTATATATT+TGG | + | chr2.1:13226326-13226345 | MS.gene35867:intron | 5.0% |
| ACTTGCGAGGACAACAGCAA+TGG | + | chr2.1:13227412-13227431 | MS.gene35867:CDS | 50.0% | |
| CGGATGCATGAAATCTGGAC+CGG | + | chr2.1:13229039-13229058 | MS.gene35867:CDS | 50.0% | |
| CTGAACCTAAAGGACTTGCG+AGG | + | chr2.1:13227399-13227418 | MS.gene35867:CDS | 50.0% | |
| CTGCCTCAATAGCTCGATCT+AGG | - | chr2.1:13228502-13228521 | None:intergenic | 50.0% | |
| GAAGTGAAGCGCGATACGAA+AGG | + | chr2.1:13227576-13227595 | MS.gene35867:CDS | 50.0% | |
| GTTGTCCTCGCAAGTCCTTT+AGG | - | chr2.1:13227407-13227426 | None:intergenic | 50.0% | |
| TGAACCTTGTGGCATCCAAG+TGG | - | chr2.1:13227908-13227927 | None:intergenic | 50.0% | |
| ! | ATCTAGGATACCACCTGTCG+TGG | - | chr2.1:13228486-13228505 | None:intergenic | 50.0% |
| ! | CTCGCAAGTCCTTTAGGTTC+AGG | - | chr2.1:13227401-13227420 | None:intergenic | 50.0% |
| CCTGTCGTGGCACTAGAGAA+AGG | - | chr2.1:13228473-13228492 | None:intergenic | 55.0% | |
| CCTTTCTCTAGTGCCACGAC+AGG | + | chr2.1:13228470-13228489 | MS.gene35867:intron | 55.0% | |
| TTCTCTAGTGCCACGACAGG+TGG | + | chr2.1:13228473-13228492 | MS.gene35867:intron | 55.0% | |
| GAGATTCCGTTCGCGCCACT+TGG | + | chr2.1:13227890-13227909 | MS.gene35867:CDS | 60.0% | |
| TGGCATCCAAGTGGCGCGAA+CGG | - | chr2.1:13227899-13227918 | None:intergenic | 60.0% | |
| CGCGCCACTTGGATGCCACA+AGG | + | chr2.1:13227901-13227920 | MS.gene35867:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 13226115 | 13229486 | 13226115 | ID=MS.gene35867 |
| chr2.1 | mRNA | 13226115 | 13229486 | 13226115 | ID=MS.gene35867.t1;Parent=MS.gene35867 |
| chr2.1 | exon | 13226115 | 13226224 | 13226115 | ID=MS.gene35867.t1.exon1;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13226115 | 13226224 | 13226115 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13227385 | 13227481 | 13227385 | ID=MS.gene35867.t1.exon2;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13227385 | 13227481 | 13227385 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13227564 | 13227625 | 13227564 | ID=MS.gene35867.t1.exon3;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13227564 | 13227625 | 13227564 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13227711 | 13227922 | 13227711 | ID=MS.gene35867.t1.exon4;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13227711 | 13227922 | 13227711 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13228213 | 13228276 | 13228213 | ID=MS.gene35867.t1.exon5;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13228213 | 13228276 | 13228213 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13228481 | 13228553 | 13228481 | ID=MS.gene35867.t1.exon6;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13228481 | 13228553 | 13228481 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13228658 | 13228778 | 13228658 | ID=MS.gene35867.t1.exon7;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13228658 | 13228778 | 13228658 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13228987 | 13229074 | 13228987 | ID=MS.gene35867.t1.exon8;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13228987 | 13229074 | 13228987 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13229177 | 13229302 | 13229177 | ID=MS.gene35867.t1.exon9;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13229177 | 13229302 | 13229177 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| chr2.1 | exon | 13229380 | 13229486 | 13229380 | ID=MS.gene35867.t1.exon10;Parent=MS.gene35867.t1 |
| chr2.1 | CDS | 13229380 | 13229486 | 13229380 | ID=cds.MS.gene35867.t1;Parent=MS.gene35867.t1 |
| Gene Sequence |
| Protein sequence |
