Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68230.t1 | RHN71273.1 | 96.8 | 253 | 8 | 0 | 485 | 737 | 293 | 545 | 4.00E-143 | 518.8 |
| MS.gene68230.t1 | RHN71273.1 | 97.1 | 34 | 1 | 0 | 1 | 34 | 28 | 61 | 1.70E-08 | 71.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68230.t1 | D2CZZ9 | 39.1 | 220 | 126 | 3 | 517 | 728 | 59 | 278 | 8.4e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68230.t1 | A0A396J3N7 | 96.8 | 253 | 8 | 0 | 485 | 737 | 293 | 545 | 2.9e-143 | 518.8 |
| MS.gene68230.t1 | A0A396J3N7 | 97.1 | 34 | 1 | 0 | 1 | 34 | 28 | 61 | 1.2e-08 | 71.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene68230 | 0.849044 | 4.16E-60 | -1.69E-46 |
| MS.gene049173 | MS.gene68230 | 0.826505 | 2.61E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene68230 | 0.819172 | 1.34E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene68230 | 0.859624 | 3.64E-63 | -1.69E-46 |
| MS.gene049232 | MS.gene68230 | 0.81916 | 1.34E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene68230 | 0.869365 | 3.27E-66 | -1.69E-46 |
| MS.gene049320 | MS.gene68230 | 0.850869 | 1.28E-60 | -1.69E-46 |
| MS.gene04939 | MS.gene68230 | 0.812849 | 3.45E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene68230 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene68230 | 0.853539 | 2.24E-61 | -1.69E-46 |
| MS.gene05010 | MS.gene68230 | 0.810193 | 1.30E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene68230 | 0.84308 | 1.75E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene68230 | 0.848966 | 4.38E-60 | -1.69E-46 |
| MS.gene050170 | MS.gene68230 | 0.822389 | 2.43E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene68230 | 0.849653 | 2.82E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene68230 | 0.852186 | 5.45E-61 | -1.69E-46 |
| MS.gene050403 | MS.gene68230 | 0.807141 | 5.84E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene68230 | 0.866614 | 2.51E-65 | -1.69E-46 |
| MS.gene050496 | MS.gene68230 | 0.819453 | 1.15E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene68230 | 0.860418 | 2.09E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene68230 | 0.850498 | 1.63E-60 | -1.69E-46 |
| MS.gene050577 | MS.gene68230 | 0.837877 | 4.01E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene68230 | 0.87192 | 4.73E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene68230 | 0.850501 | 1.63E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene68230 | 0.835882 | 1.30E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene68230 | 0.825043 | 5.81E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene68230 | 0.82524 | 5.22E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene68230 | 0.872272 | 3.61E-67 | -1.69E-46 |
| MS.gene050868 | MS.gene68230 | 0.852426 | 4.65E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene68230 | 0.849927 | 2.36E-60 | -1.69E-46 |
| MS.gene050876 | MS.gene68230 | 0.828835 | 7.21E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene68230 | 0.853152 | 2.89E-61 | -1.69E-46 |
| MS.gene050950 | MS.gene68230 | 0.820102 | 8.19E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene68230 | 0.859138 | 5.09E-63 | -1.69E-46 |
| MS.gene051228 | MS.gene68230 | 0.827441 | 1.56E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene68230 | 0.860709 | 1.71E-63 | -1.69E-46 |
| MS.gene051317 | MS.gene68230 | 0.867282 | 1.53E-65 | -1.69E-46 |
| MS.gene051551 | MS.gene68230 | 0.816367 | 5.74E-52 | -1.69E-46 |
| MS.gene051617 | MS.gene68230 | 0.810993 | 8.75E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene68230 | 0.82217 | 2.73E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene68230 | 0.820528 | 6.54E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene68230 | 0.848064 | 7.77E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene68230 | 0.83558 | 1.54E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene68230 | 0.80806 | 3.73E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene68230 | 0.813971 | 1.95E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene68230 | 0.808406 | 3.15E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene68230 | 0.803923 | 2.77E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene68230 | 0.801952 | 7.06E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene68230 | 0.803916 | 2.77E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene68230 | 0.850286 | 1.87E-60 | -1.69E-46 |
| MS.gene052872 | MS.gene68230 | 0.855384 | 6.54E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene68230 | 0.833812 | 4.30E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene68230 | 0.822789 | 1.96E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene68230 | 0.806906 | 6.55E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene68230 | 0.809831 | 1.56E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene68230 | 0.817283 | 3.57E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene68230 | 0.830218 | 3.32E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene68230 | 0.833199 | 6.12E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene68230 | 0.813765 | 2.17E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene68230 | 0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene68230 | 0.851752 | 7.23E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene68230 | 0.830004 | 3.75E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene68230 | 0.850639 | 1.49E-60 | -1.69E-46 |
| MS.gene054408 | MS.gene68230 | 0.801119 | 1.05E-48 | -1.69E-46 |
| MS.gene054595 | MS.gene68230 | 0.839043 | 2.01E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene68230 | 0.856439 | 3.22E-62 | -1.69E-46 |
| MS.gene054642 | MS.gene68230 | 0.84072 | 7.34E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene68230 | 0.84349 | 1.36E-58 | -1.69E-46 |
| MS.gene05494 | MS.gene68230 | 0.829483 | 5.02E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene68230 | 0.866448 | 2.83E-65 | -1.69E-46 |
| MS.gene055206 | MS.gene68230 | 0.802896 | 4.51E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene68230 | 0.807291 | 5.43E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene68230 | 0.839845 | 1.24E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene68230 | 0.845166 | 4.81E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene68230 | 0.829684 | 4.48E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene68230 | 0.804495 | 2.10E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene68230 | 0.907662 | 3.98E-81 | -1.69E-46 |
| MS.gene055750 | MS.gene68230 | 0.87253 | 2.96E-67 | -1.69E-46 |
| MS.gene055751 | MS.gene68230 | 0.904566 | 1.07E-79 | -1.69E-46 |
| MS.gene055776 | MS.gene68230 | 0.856334 | 3.45E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene68230 | 0.862011 | 6.85E-64 | -1.69E-46 |
| MS.gene055941 | MS.gene68230 | 0.821021 | 5.04E-53 | -1.69E-46 |
| MS.gene056283 | MS.gene68230 | 0.809134 | 2.20E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene68230 | 0.83568 | 1.46E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene68230 | 0.825047 | 5.80E-54 | -1.69E-46 |
| MS.gene056449 | MS.gene68230 | 0.861626 | 8.99E-64 | -1.69E-46 |
| MS.gene056504 | MS.gene68230 | 0.859999 | 2.80E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene68230 | 0.869909 | 2.17E-66 | -1.69E-46 |
| MS.gene056657 | MS.gene68230 | 0.858923 | 5.90E-63 | -1.69E-46 |
| MS.gene056692 | MS.gene68230 | 0.815382 | 9.51E-52 | -1.69E-46 |
| MS.gene056898 | MS.gene68230 | 0.813649 | 2.30E-51 | -1.69E-46 |
| MS.gene056903 | MS.gene68230 | 0.815167 | 1.06E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene68230 | 0.813645 | 2.30E-51 | -1.69E-46 |
| MS.gene05753 | MS.gene68230 | 0.8155 | 8.96E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene68230 | 0.827364 | 1.63E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene68230 | 0.849167 | 3.85E-60 | -1.69E-46 |
| MS.gene05787 | MS.gene68230 | 0.832654 | 8.35E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene68230 | 0.804276 | 2.34E-49 | -1.69E-46 |
| MS.gene058335 | MS.gene68230 | 0.805405 | 1.36E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene68230 | 0.813441 | 2.56E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene68230 | 0.808786 | 2.61E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene68230 | 0.848372 | 6.39E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene68230 | 0.824275 | 8.81E-54 | -1.69E-46 |
| MS.gene058719 | MS.gene68230 | 0.811359 | 7.28E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene68230 | 0.825095 | 5.65E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene68230 | 0.871353 | 7.29E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene68230 | 0.815952 | 7.10E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene68230 | 0.844915 | 5.62E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene68230 | 0.855364 | 6.63E-62 | -1.69E-46 |
| MS.gene059079 | MS.gene68230 | 0.814 | 1.93E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene68230 | 0.824079 | 9.80E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene68230 | 0.831152 | 1.96E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene68230 | 0.86067 | 1.76E-63 | -1.69E-46 |
| MS.gene059718 | MS.gene68230 | 0.850161 | 2.03E-60 | -1.69E-46 |
| MS.gene059756 | MS.gene68230 | 0.814303 | 1.65E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene68230 | 0.853099 | 2.99E-61 | -1.69E-46 |
| MS.gene06000 | MS.gene68230 | 0.82946 | 5.09E-55 | -1.69E-46 |
| MS.gene060295 | MS.gene68230 | 0.811077 | 8.38E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene68230 | 0.822655 | 2.11E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene68230 | 0.861611 | 9.08E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene68230 | 0.829965 | 3.83E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene68230 | 0.826755 | 2.28E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene68230 | 0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene06097 | MS.gene68230 | 0.804304 | 2.30E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene68230 | 0.85305 | 3.09E-61 | -1.69E-46 |
| MS.gene06111 | MS.gene68230 | 0.836121 | 1.13E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene68230 | 0.836546 | 8.79E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68230.t1 | MTR_3g116320 | 83.036 | 672 | 110 | 3 | 67 | 737 | 26 | 694 | 0.0 | 1142 |
| MS.gene68230.t1 | MTR_3g116320 | 87.260 | 416 | 52 | 1 | 1 | 416 | 28 | 442 | 0.0 | 731 |
| MS.gene68230.t1 | MTR_3g116270 | 75.153 | 491 | 120 | 2 | 248 | 737 | 23 | 512 | 0.0 | 772 |
| MS.gene68230.t1 | MTR_3g116270 | 67.647 | 238 | 75 | 1 | 1 | 236 | 28 | 265 | 6.58e-104 | 328 |
| MS.gene68230.t1 | MTR_3g116270 | 63.111 | 225 | 83 | 0 | 127 | 351 | 41 | 265 | 3.22e-88 | 286 |
| MS.gene68230.t1 | MTR_3g116270 | 59.833 | 239 | 95 | 1 | 179 | 416 | 23 | 261 | 1.53e-84 | 277 |
| MS.gene68230.t1 | MTR_3g116270 | 62.443 | 221 | 83 | 0 | 150 | 370 | 41 | 261 | 2.16e-84 | 276 |
| MS.gene68230.t1 | MTR_3g116270 | 58.996 | 239 | 97 | 1 | 87 | 324 | 23 | 261 | 4.39e-84 | 276 |
| MS.gene68230.t1 | MTR_3g116270 | 57.322 | 239 | 101 | 1 | 156 | 393 | 23 | 261 | 2.20e-81 | 268 |
| MS.gene68230.t1 | MTR_3g116270 | 57.322 | 239 | 101 | 1 | 64 | 301 | 23 | 261 | 3.11e-80 | 266 |
| MS.gene68230.t1 | MTR_3g116270 | 59.649 | 114 | 40 | 2 | 14 | 123 | 156 | 267 | 1.89e-31 | 129 |
| MS.gene68230.t1 | MTR_4g069570 | 50.530 | 283 | 114 | 5 | 475 | 731 | 54 | 336 | 2.76e-94 | 296 |
| MS.gene68230.t1 | MTR_4g069040 | 56.444 | 225 | 96 | 2 | 508 | 730 | 285 | 509 | 1.71e-92 | 298 |
| MS.gene68230.t1 | MTR_4g069520 | 58.475 | 236 | 96 | 2 | 500 | 733 | 476 | 711 | 4.83e-92 | 303 |
| MS.gene68230.t1 | MTR_4g069520 | 58.475 | 236 | 96 | 2 | 500 | 733 | 490 | 725 | 6.89e-92 | 303 |
| MS.gene68230.t1 | MTR_4g069550 | 57.203 | 236 | 99 | 2 | 500 | 733 | 230 | 465 | 2.22e-90 | 291 |
| MS.gene68230.t1 | MTR_6g086530 | 57.073 | 205 | 85 | 3 | 529 | 730 | 1 | 205 | 6.50e-70 | 228 |
| MS.gene68230.t1 | MTR_3g116410 | 47.489 | 219 | 112 | 1 | 515 | 730 | 57 | 275 | 1.74e-68 | 227 |
| MS.gene68230.t1 | MTR_4g069680 | 46.575 | 219 | 114 | 1 | 515 | 730 | 68 | 286 | 2.39e-65 | 219 |
| MS.gene68230.t1 | MTR_3g107830 | 46.119 | 219 | 115 | 1 | 515 | 730 | 37 | 255 | 2.63e-65 | 218 |
| MS.gene68230.t1 | MTR_3g116380 | 42.466 | 219 | 122 | 2 | 516 | 731 | 86 | 303 | 1.17e-59 | 204 |
| MS.gene68230.t1 | MTR_1g008500 | 41.284 | 218 | 118 | 5 | 517 | 729 | 171 | 383 | 2.08e-45 | 167 |
| MS.gene68230.t1 | MTR_1g008470 | 39.720 | 214 | 122 | 4 | 517 | 728 | 89 | 297 | 2.14e-43 | 159 |
| MS.gene68230.t1 | MTR_1g008510 | 39.535 | 215 | 123 | 4 | 517 | 729 | 115 | 324 | 7.40e-43 | 158 |
| MS.gene68230.t1 | MTR_4g068420 | 53.191 | 141 | 45 | 3 | 595 | 733 | 2 | 123 | 2.05e-42 | 150 |
| MS.gene68230.t1 | MTR_1g008530 | 39.437 | 213 | 120 | 5 | 522 | 729 | 14 | 222 | 2.97e-42 | 153 |
| MS.gene68230.t1 | MTR_1g008590 | 39.070 | 215 | 123 | 4 | 517 | 728 | 113 | 322 | 4.08e-42 | 156 |
| MS.gene68230.t1 | MTR_0312s0030 | 39.070 | 215 | 123 | 4 | 517 | 728 | 113 | 322 | 5.80e-42 | 155 |
| MS.gene68230.t1 | MTR_1g007520 | 39.070 | 215 | 123 | 4 | 517 | 728 | 113 | 322 | 5.80e-42 | 155 |
| MS.gene68230.t1 | MTR_3g109490 | 40.183 | 219 | 122 | 6 | 517 | 730 | 107 | 321 | 1.44e-40 | 152 |
| MS.gene68230.t1 | MTR_1g008560 | 38.356 | 219 | 124 | 5 | 517 | 729 | 115 | 328 | 1.85e-40 | 152 |
| MS.gene68230.t1 | MTR_1g008460 | 38.208 | 212 | 125 | 3 | 517 | 728 | 89 | 294 | 9.99e-40 | 149 |
| MS.gene68230.t1 | MTR_1g008450 | 38.710 | 217 | 125 | 4 | 515 | 728 | 99 | 310 | 9.74e-38 | 143 |
| MS.gene68230.t1 | MTR_1g008580 | 37.714 | 175 | 102 | 4 | 557 | 729 | 1 | 170 | 1.85e-33 | 127 |
| MS.gene68230.t1 | MTR_5g034320 | 33.178 | 214 | 121 | 8 | 517 | 719 | 415 | 617 | 4.17e-25 | 111 |
| MS.gene68230.t1 | MTR_8g064560 | 33.180 | 217 | 117 | 7 | 517 | 719 | 412 | 614 | 2.47e-24 | 108 |
| MS.gene68230.t1 | MTR_8g064500 | 32.432 | 222 | 112 | 7 | 517 | 719 | 159 | 361 | 2.85e-24 | 105 |
| MS.gene68230.t1 | MTR_3g078090 | 32.579 | 221 | 113 | 7 | 517 | 719 | 413 | 615 | 5.99e-24 | 107 |
| MS.gene68230.t1 | MTR_8g064530 | 31.532 | 222 | 134 | 6 | 517 | 729 | 429 | 641 | 9.91e-24 | 107 |
| MS.gene68230.t1 | MTR_4g069540 | 57.333 | 75 | 32 | 0 | 503 | 577 | 20 | 94 | 1.02e-22 | 94.0 |
| MS.gene68230.t1 | MTR_4g133840 | 32.642 | 193 | 108 | 6 | 540 | 729 | 14 | 187 | 2.61e-21 | 92.8 |
| MS.gene68230.t1 | MTR_8g046000 | 32.110 | 218 | 122 | 7 | 517 | 732 | 31 | 224 | 4.57e-21 | 93.2 |
| MS.gene68230.t1 | MTR_5g033350 | 28.497 | 193 | 121 | 5 | 543 | 728 | 16 | 198 | 1.87e-19 | 87.8 |
| MS.gene68230.t1 | MTR_8g445140 | 36.478 | 159 | 89 | 6 | 573 | 730 | 155 | 302 | 2.90e-19 | 89.7 |
| MS.gene68230.t1 | MTR_5g033340 | 29.348 | 184 | 113 | 5 | 543 | 719 | 195 | 368 | 2.52e-18 | 88.2 |
| MS.gene68230.t1 | MTR_5g033340 | 30.000 | 160 | 95 | 5 | 560 | 712 | 4 | 153 | 9.94e-15 | 77.0 |
| MS.gene68230.t1 | MTR_8g445170 | 34.177 | 158 | 92 | 5 | 574 | 730 | 237 | 383 | 4.23e-18 | 87.8 |
| MS.gene68230.t1 | MTR_8g045890 | 34.667 | 150 | 88 | 5 | 581 | 730 | 292 | 431 | 1.29e-17 | 86.7 |
| MS.gene68230.t1 | MTR_5g033330 | 29.439 | 214 | 129 | 8 | 517 | 719 | 405 | 607 | 1.57e-17 | 87.4 |
| MS.gene68230.t1 | MTR_5g033330 | 29.469 | 207 | 124 | 8 | 517 | 712 | 197 | 392 | 2.88e-15 | 80.1 |
| MS.gene68230.t1 | MTR_5g033330 | 28.249 | 177 | 110 | 5 | 543 | 712 | 18 | 184 | 1.11e-14 | 78.2 |
| MS.gene68230.t1 | MTR_8g045890 | 34.667 | 150 | 88 | 5 | 581 | 730 | 333 | 472 | 2.21e-17 | 86.3 |
| MS.gene68230.t1 | MTR_8g045890 | 34.667 | 150 | 88 | 5 | 581 | 730 | 370 | 509 | 2.84e-17 | 86.3 |
| MS.gene68230.t1 | MTR_8g045880 | 33.333 | 141 | 84 | 4 | 590 | 730 | 184 | 314 | 1.00e-14 | 76.6 |
| MS.gene68230.t1 | MTR_8g045880 | 33.333 | 141 | 84 | 4 | 590 | 730 | 221 | 351 | 1.16e-14 | 76.6 |
| MS.gene68230.t1 | MTR_8g045880 | 33.333 | 141 | 84 | 4 | 590 | 730 | 219 | 349 | 1.35e-14 | 76.6 |
| MS.gene68230.t1 | MTR_1g045860 | 32.000 | 150 | 93 | 4 | 581 | 730 | 119 | 259 | 1.72e-13 | 72.0 |
| MS.gene68230.t1 | MTR_2g081770 | 28.099 | 242 | 135 | 10 | 502 | 730 | 55 | 270 | 2.66e-13 | 71.2 |
| MS.gene68230.t1 | MTR_8g075930 | 38.667 | 75 | 43 | 2 | 647 | 719 | 14 | 87 | 4.72e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68230.t1 | AT1G49320 | 33.942 | 274 | 165 | 6 | 468 | 729 | 9 | 278 | 3.92e-44 | 160 |
| MS.gene68230.t1 | AT5G25610 | 38.073 | 218 | 125 | 6 | 517 | 728 | 176 | 389 | 1.20e-38 | 148 |
| MS.gene68230.t1 | AT1G70370 | 32.727 | 220 | 134 | 6 | 517 | 729 | 411 | 623 | 3.13e-25 | 111 |
| MS.gene68230.t1 | AT1G70370 | 32.727 | 220 | 134 | 6 | 517 | 729 | 411 | 623 | 3.13e-25 | 111 |
| MS.gene68230.t1 | AT1G23760 | 32.812 | 192 | 123 | 4 | 540 | 729 | 432 | 619 | 5.28e-24 | 107 |
| MS.gene68230.t1 | AT1G60390 | 29.798 | 198 | 117 | 5 | 541 | 728 | 435 | 620 | 3.29e-21 | 99.0 |
Find 215 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATCAAGTTTATCTTGA+TGG | 0.211968 | 3.4:-99168810 | MS.gene68230:CDS |
| AGGATATCTATGCTCCTAAA+TGG | 0.228868 | 3.4:-99167678 | MS.gene68230:CDS |
| GAATTTGTTCATAGTGTTCT+TGG | 0.231624 | 3.4:-99167790 | MS.gene68230:CDS |
| TTTGCAGAACTACACCATTT+TGG | 0.234201 | 3.4:-99167710 | MS.gene68230:CDS |
| TCCCTGTAAAGCACGTTCTA+TGG | 0.238519 | 3.4:-99167438 | MS.gene68230:CDS |
| GTCTTTCATGTCTTCACCTT+GGG | 0.240047 | 3.4:+99167888 | None:intergenic |
| TCCAATCAAGTTTATCTTGA+TGG | 0.240985 | 3.4:-99168396 | MS.gene68230:CDS |
| TCCAATCAAGTTTATCTTGA+TGG | 0.240985 | 3.4:-99168603 | MS.gene68230:CDS |
| GATAAACTTGATTGAAGTTT+GGG | 0.247881 | 3.4:+99168817 | None:intergenic |
| AGGTCTTCAAAGTTCTTCTA+AGG | 0.253474 | 3.4:-99167588 | MS.gene68230:CDS |
| ATCCTTTGAGATTTCCAAAA+TGG | 0.256902 | 3.4:+99167696 | None:intergenic |
| GATAAACTTGATTGGAGTTT+GGG | 0.256939 | 3.4:+99168403 | None:intergenic |
| GATAAACTTGATTGGAGTTT+GGG | 0.256939 | 3.4:+99168610 | None:intergenic |
| TCTAATCAAGTTTATCTTGA+TGG | 0.268313 | 3.4:-99168327 | MS.gene68230:CDS |
| GATAAACTTGATTAGAGTTT+GGG | 0.274295 | 3.4:+99168334 | None:intergenic |
| GATAAACTTGGTTGGAGTTT+GGG | 0.274888 | 3.4:+99168472 | None:intergenic |
| GATAAACTTGGTTGGAGTTT+GGG | 0.274888 | 3.4:+99168679 | None:intergenic |
| GATAAACTTGGTTGGAGTTT+GGG | 0.274888 | 3.4:+99169162 | None:intergenic |
| TCCAATCGAGTTTATCTTGA+TGG | 0.276513 | 3.4:-99168948 | MS.gene68230:CDS |
| GGGTGACAAGCTACCCATTT+AGG | 0.279438 | 3.4:+99167664 | None:intergenic |
| TCCAACCAAGTTTATCTTGA+TGG | 0.283723 | 3.4:-99168465 | MS.gene68230:CDS |
| TCCAACCAAGTTTATCTTGA+TGG | 0.283723 | 3.4:-99168672 | MS.gene68230:CDS |
| TCCAATCAAGTTTACCTTGA+TGG | 0.284115 | 3.4:-99168258 | MS.gene68230:CDS |
| TCCAATCAAGTTTACCTTGA+TGG | 0.284115 | 3.4:-99168534 | MS.gene68230:CDS |
| TCCAATCAAGTTTACCTTGA+TGG | 0.284115 | 3.4:-99168741 | MS.gene68230:CDS |
| GCGAACTCCATGAAGAAAAT+TGG | 0.289076 | 3.4:-99168144 | MS.gene68230:CDS |
| GCCCATAGAACGTGCTTTAC+AGG | 0.291191 | 3.4:+99167436 | None:intergenic |
| TACAATCAAGTTTACCTTGA+TGG | 0.294768 | 3.4:-99169086 | MS.gene68230:CDS |
| TCTAATCAAGTTTACCTTGA+TGG | 0.295765 | 3.4:-99169224 | MS.gene68230:CDS |
| AGATAAACTTGATTGAAGTT+TGG | 0.296038 | 3.4:+99168816 | None:intergenic |
| TCCAATCAAGTTTACCTTGA+TGG | 0.298027 | 3.4:-99168879 | MS.gene68230:CDS |
| AGATAAACTTGGTTGGAGTT+TGG | 0.299383 | 3.4:+99168471 | None:intergenic |
| AGATAAACTTGGTTGGAGTT+TGG | 0.299383 | 3.4:+99168678 | None:intergenic |
| CTCAATCAGGCTTACCTTGA+TGG | 0.299708 | 3.4:-99168189 | MS.gene68230:CDS |
| AGATAAACTTGATTGGAGTT+TGG | 0.300825 | 3.4:+99168402 | None:intergenic |
| AGATAAACTTGATTGGAGTT+TGG | 0.300825 | 3.4:+99168609 | None:intergenic |
| GTTGATCAGCCTTACCTTGA+TGG | 0.301941 | 3.4:-99169563 | MS.gene68230:CDS |
| AGATAAACTTGATTAGAGTT+TGG | 0.304429 | 3.4:+99168333 | None:intergenic |
| AGATAAACTTGGTTGGAGTT+TGG | 0.312080 | 3.4:+99169161 | None:intergenic |
| AGTTGTGTGAATGTTATATT+TGG | 0.312223 | 3.4:+99167759 | None:intergenic |
| TTACCTAGATGGATGGTTAA+AGG | 0.317562 | 3.4:-99169351 | MS.gene68230:CDS |
| AGGTAAACTTGATTGGAGTT+AGG | 0.321370 | 3.4:+99168264 | None:intergenic |
| AGGTAAACTTGATTGGAGTT+AGG | 0.321370 | 3.4:+99168885 | None:intergenic |
| AGGTAAACTTGATTGTAGTT+AGG | 0.321428 | 3.4:+99169092 | None:intergenic |
| AGGTAAACTTGATTAGAGTT+AGG | 0.324677 | 3.4:+99169230 | None:intergenic |
| TGGAGACATAATGGATGCTT+TGG | 0.329852 | 3.4:-99167557 | MS.gene68230:CDS |
| AGGTAAACTTGATTGGAGTT+AGG | 0.334772 | 3.4:+99169299 | None:intergenic |
| CTCAATCAGGCTTACCTTGA+TGG | 0.351388 | 3.4:-99169017 | MS.gene68230:CDS |
| TCTAATCCAAGTTATCTTGA+TGG | 0.360948 | 3.4:-99169500 | MS.gene68230:CDS |
| AGTTGAAATATAAAATGATT+AGG | 0.362732 | 3.4:+99167502 | None:intergenic |
| GGTAAACTTGATTGTAGTTA+GGG | 0.371166 | 3.4:+99169093 | None:intergenic |
| TCCAATCAAGTTTACCTAGA+TGG | 0.372314 | 3.4:-99169362 | MS.gene68230:CDS |
| TTGGTTCAGTTGGTGGCCTC+TGG | 0.375839 | 3.4:+99167403 | None:intergenic |
| GTTCTTCTAAGGGGTCAATA+TGG | 0.383693 | 3.4:-99167577 | MS.gene68230:CDS |
| TCGATCTTGCTTTCTCAACT+TGG | 0.386255 | 3.4:+99168427 | None:intergenic |
| TCGATCTTGCTTTCTCAACT+TGG | 0.386255 | 3.4:+99168634 | None:intergenic |
| ACCAATCAAGTTTACCTAGA+TGG | 0.387215 | 3.4:-99169431 | MS.gene68230:CDS |
| AGGTAAACTTGATTGGAGTT+AGG | 0.390322 | 3.4:+99168540 | None:intergenic |
| AGGTAAACTTGATTGGAGTT+AGG | 0.390322 | 3.4:+99168747 | None:intergenic |
| TGGCAGTAGTAAAGAGCATA+AGG | 0.391483 | 3.4:+99167631 | None:intergenic |
| CTAGTTCCCTTTGGTTCAGT+TGG | 0.397858 | 3.4:+99167393 | None:intergenic |
| TTGATCTTGCCTTCTCAACT+TGG | 0.398535 | 3.4:+99168496 | None:intergenic |
| TTGATCTTGCCTTCTCAACT+TGG | 0.398535 | 3.4:+99168703 | None:intergenic |
| ACTATGGATGATCTTTATGT+AGG | 0.401691 | 3.4:-99168045 | MS.gene68230:CDS |
| GGTAAACTTGATTGGAGTTA+GGG | 0.403936 | 3.4:+99168265 | None:intergenic |
| GGTAAACTTGATTGGAGTTA+GGG | 0.403936 | 3.4:+99168886 | None:intergenic |
| GGTAAACTTGATTGGAGTTA+GGG | 0.403936 | 3.4:+99169300 | None:intergenic |
| TCGATCTTGCTTTCTCAACT+TGG | 0.408406 | 3.4:+99168358 | None:intergenic |
| GAGAATAGTTGAAGAAGGCT+TGG | 0.410178 | 3.4:+99167928 | None:intergenic |
| TCCAATCAAGTTTACCTTGA+CGG | 0.412584 | 3.4:-99169293 | MS.gene68230:CDS |
| GTTCCCTTTGGTTCAGTTGG+TGG | 0.415275 | 3.4:+99167396 | None:intergenic |
| TGAGAGAGAATAGTTGAAGA+AGG | 0.421944 | 3.4:+99167923 | None:intergenic |
| GGTAAACTTGATTAGAGTTA+GGG | 0.423201 | 3.4:+99169231 | None:intergenic |
| AACCATCCATCAAGATAACT+TGG | 0.424143 | 3.4:+99169494 | None:intergenic |
| CGTGCTTTACAGGGAAGAAA+TGG | 0.426994 | 3.4:+99167446 | None:intergenic |
| ATCAGCCTTACCTTGATGGC+TGG | 0.428156 | 3.4:-99169559 | MS.gene68230:CDS |
| TCCATCTAGGTAAACTTGAT+TGG | 0.430236 | 3.4:+99169361 | None:intergenic |
| TTGGTGGCCTCTGGTGGGAG+TGG | 0.432130 | 3.4:+99167412 | None:intergenic |
| CAACTACTTGGAATGAAGCC+TGG | 0.433769 | 3.4:-99167484 | MS.gene68230:CDS |
| TCCATCAAGGTAAACTTGAT+TGG | 0.436782 | 3.4:+99168257 | None:intergenic |
| TCCATCAAGGTAAACTTGAT+TGG | 0.436782 | 3.4:+99168533 | None:intergenic |
| TCCATCAAGGTAAACTTGAT+TGG | 0.436782 | 3.4:+99168740 | None:intergenic |
| GTTCAGTTGGTGGCCTCTGG+TGG | 0.441778 | 3.4:+99167406 | None:intergenic |
| TATCTTTCAACCATCCATCT+AGG | 0.444354 | 3.4:+99169417 | None:intergenic |
| TGTCTTTCATGTCTTCACCT+TGG | 0.444739 | 3.4:+99167887 | None:intergenic |
| AACTTGATTGTAGTTAGGGT+TGG | 0.447399 | 3.4:+99169097 | None:intergenic |
| GAAAGATACCAAGGATCAAA+TGG | 0.449700 | 3.4:-99168229 | MS.gene68230:CDS |
| GCCATCAAGGTAAACTTGAT+TGG | 0.450457 | 3.4:+99168878 | None:intergenic |
| AACTATCCACAACCTCAATC+AGG | 0.453031 | 3.4:-99169030 | MS.gene68230:CDS |
| AAGTTAGCATATTCTCTGAT+AGG | 0.453535 | 3.4:+99168000 | None:intergenic |
| GTGAATTTGAACCCACAAAA+GGG | 0.456334 | 3.4:-99167852 | MS.gene68230:CDS |
| GGTAAGCCTGATTGAGGTTG+TGG | 0.457575 | 3.4:+99169024 | None:intergenic |
| CAAGACATGGCAGAATCAAA+AGG | 0.457794 | 3.4:-99168120 | MS.gene68230:CDS |
| ACCAATACACAACCTCAATC+AGG | 0.459181 | 3.4:-99168202 | MS.gene68230:CDS |
| TCCGTCAAGGTAAACTTGAT+TGG | 0.460129 | 3.4:+99169292 | None:intergenic |
| TCCATCAAGATAAACTTGAT+TGG | 0.461282 | 3.4:+99168395 | None:intergenic |
| TCCATCAAGATAAACTTGAT+TGG | 0.461282 | 3.4:+99168602 | None:intergenic |
| GAAAGACACCAAAGATCAAA+AGG | 0.461407 | 3.4:-99169057 | MS.gene68230:CDS |
| ATCAAGTTTACCTTGATGGC+TGG | 0.461599 | 3.4:-99169082 | MS.gene68230:CDS |
| GGGTCAATATGGAGACATAA+TGG | 0.464907 | 3.4:-99167566 | MS.gene68230:CDS |
| TCCAACCAAGTTTATCTTGA+CGG | 0.468204 | 3.4:-99169155 | MS.gene68230:CDS |
| TGTGAATTTGAACCCACAAA+AGG | 0.468537 | 3.4:-99167853 | MS.gene68230:CDS |
| AGAGCATAAGGGTAAGGCCT+AGG | 0.470306 | 3.4:+99167643 | None:intergenic |
| AACTACTTGGAATGAAGCCT+GGG | 0.472218 | 3.4:-99167483 | MS.gene68230:CDS |
| TCCATCTAGGTAAACTTGAT+TGG | 0.472763 | 3.4:+99169430 | None:intergenic |
| ACTAGCTATCCCACAACATC+AGG | 0.475940 | 3.4:-99167739 | MS.gene68230:CDS |
| AACTTGATTGGAGTTAGGGG+TGG | 0.478066 | 3.4:+99168269 | None:intergenic |
| AACTTGATTGGAGTTAGGGG+TGG | 0.478066 | 3.4:+99168890 | None:intergenic |
| AACTTGATTGGAGTTAGGGG+TGG | 0.478066 | 3.4:+99169304 | None:intergenic |
| CCCTGTAAAGCACGTTCTAT+GGG | 0.478082 | 3.4:-99167437 | MS.gene68230:CDS |
| CTATGGATGATCTTTATGTA+GGG | 0.478680 | 3.4:-99168044 | MS.gene68230:CDS |
| GGTAGTTGCGACTTGGAGAA+AGG | 0.479066 | 3.4:+99167949 | None:intergenic |
| GCCTGATTGAGGTTGTGTAT+TGG | 0.481303 | 3.4:+99168201 | None:intergenic |
| GGAGACATAATGGATGCTTT+GGG | 0.482669 | 3.4:-99167556 | MS.gene68230:CDS |
| CTACCTAGACATAGGGAGTA+AGG | 0.491781 | 3.4:-99167608 | MS.gene68230:CDS |
| ATCAGGCTTACCTTGATGGT+TGG | 0.493059 | 3.4:-99168185 | MS.gene68230:CDS |
| TAATGAAGTAGGACAAGCTT+TGG | 0.493432 | 3.4:+99167825 | None:intergenic |
| TTCAGTTGGTGGCCTCTGGT+GGG | 0.494537 | 3.4:+99167407 | None:intergenic |
| GATAAACTCGATTGGAGTTG+TGG | 0.497172 | 3.4:+99168955 | None:intergenic |
| ATCAAGTTTACCTTGATGGC+TGG | 0.497883 | 3.4:-99168875 | MS.gene68230:CDS |
| TATCCTTTAACCATCCATCT+AGG | 0.498476 | 3.4:+99169348 | None:intergenic |
| GAAAGATACCAAGAATCAAA+AGG | 0.504634 | 3.4:-99169402 | MS.gene68230:CDS |
| ATCAGGCTTACCTTGATGGC+TGG | 0.504911 | 3.4:-99169013 | MS.gene68230:CDS |
| GGATATCTATGCTCCTAAAT+GGG | 0.506971 | 3.4:-99167677 | MS.gene68230:CDS |
| ATCAAGTTTATCTTGATGGA+TGG | 0.507762 | 3.4:-99168323 | MS.gene68230:CDS |
| AAGGCTTGGTAGTTGCGACT+TGG | 0.508594 | 3.4:+99167942 | None:intergenic |
| CTAACTTGAATGCCTCTGTA+TGG | 0.508943 | 3.4:+99168076 | None:intergenic |
| ATCAAGTTTATCTTGATGGA+TGG | 0.510245 | 3.4:-99168392 | MS.gene68230:CDS |
| ATCAAGTTTATCTTGATGGA+TGG | 0.510245 | 3.4:-99168599 | MS.gene68230:CDS |
| ATCAAGTTTATCTTGATGGA+TGG | 0.510245 | 3.4:-99168806 | MS.gene68230:CDS |
| ATAAACTCGATTGGAGTTGT+GGG | 0.512497 | 3.4:+99168956 | None:intergenic |
| CCAACCAAGTTTATCTTGAC+GGG | 0.512790 | 3.4:-99169154 | MS.gene68230:CDS |
| TGTCTTTCAACCAGCCATCA+AGG | 0.516147 | 3.4:+99169072 | None:intergenic |
| CATCTTTCAGCCAGCCATCA+AGG | 0.517526 | 3.4:+99168865 | None:intergenic |
| ACCATCCATCAAGATAAACT+TGG | 0.519057 | 3.4:+99168460 | None:intergenic |
| ACCATCCATCAAGATAAACT+TGG | 0.519057 | 3.4:+99168667 | None:intergenic |
| TGGCTGGTTAAAAGATAGTC+GGG | 0.523097 | 3.4:-99168997 | MS.gene68230:CDS |
| ATCAAGTTTACCTTGATGGA+TGG | 0.523440 | 3.4:-99169220 | MS.gene68230:CDS |
| ATCGAGTTTATCTTGATGGA+TGG | 0.523903 | 3.4:-99168944 | MS.gene68230:CDS |
| TTAAGCCAGCCATCAAGGTA+AGG | 0.525753 | 3.4:+99169554 | None:intergenic |
| ATCAAGTTTACCTTGATGGA+TGG | 0.525923 | 3.4:-99168254 | MS.gene68230:CDS |
| ACCAAGTTTATCTTGATGGA+TGG | 0.525923 | 3.4:-99168461 | MS.gene68230:CDS |
| ATCAAGTTTACCTTGATGGA+TGG | 0.525923 | 3.4:-99168530 | MS.gene68230:CDS |
| ACCAAGTTTATCTTGATGGA+TGG | 0.525923 | 3.4:-99168668 | MS.gene68230:CDS |
| ATCAAGTTTACCTTGATGGA+TGG | 0.525923 | 3.4:-99168737 | MS.gene68230:CDS |
| GATTCATGTCAGACGTGTCT+AGG | 0.529464 | 3.4:+99167524 | None:intergenic |
| ATGGCTGGTTAAAAGATAGT+CGG | 0.532803 | 3.4:-99168998 | MS.gene68230:CDS |
| TCTTTCATGTCTTCACCTTG+GGG | 0.533710 | 3.4:+99167889 | None:intergenic |
| ATAAACTTGGTTGGAGTTTG+GGG | 0.533931 | 3.4:+99168473 | None:intergenic |
| ATAAACTTGGTTGGAGTTTG+GGG | 0.533931 | 3.4:+99168680 | None:intergenic |
| TAGTAAAGAGCATAAGGGTA+AGG | 0.534900 | 3.4:+99167637 | None:intergenic |
| AACTCGATTGGAGTTGTGGG+TGG | 0.536216 | 3.4:+99168959 | None:intergenic |
| GGTCTTCAAAGTTCTTCTAA+GGG | 0.536641 | 3.4:-99167587 | MS.gene68230:CDS |
| AATGGGTAGCTTGTCACCCT+AGG | 0.538892 | 3.4:-99167660 | MS.gene68230:CDS |
| AACTTGATTGGAGTTAGGAG+TGG | 0.538945 | 3.4:+99168545 | None:intergenic |
| AACTTGATTGGAGTTAGGAG+TGG | 0.538945 | 3.4:+99168752 | None:intergenic |
| CTTGATGGATGGTTGAAAGA+TGG | 0.539962 | 3.4:-99168312 | MS.gene68230:CDS |
| CTTGATGGATGGTTGAAAGA+TGG | 0.539962 | 3.4:-99168450 | MS.gene68230:CDS |
| CTTGATGGATGGTTGAAAGA+TGG | 0.539962 | 3.4:-99168657 | MS.gene68230:CDS |
| ATAAACTTGGTTGGAGTTTG+GGG | 0.540923 | 3.4:+99169163 | None:intergenic |
| GGTAAACTTGATTGGTGTTG+TGG | 0.546018 | 3.4:+99169438 | None:intergenic |
| GAAAGATAGCCAAGTTGAGA+AGG | 0.546728 | 3.4:-99168505 | MS.gene68230:CDS |
| GAAAGATAGCCAAGTTGAGA+AGG | 0.546728 | 3.4:-99168712 | MS.gene68230:CDS |
| GGCAGTAGTAAAGAGCATAA+GGG | 0.547129 | 3.4:+99167632 | None:intergenic |
| TCCATCAAGATAAACTCGAT+TGG | 0.551426 | 3.4:+99168947 | None:intergenic |
| GAGCATAAGGGTAAGGCCTA+GGG | 0.551678 | 3.4:+99167644 | None:intergenic |
| ATCCAAGTTATCTTGATGGA+TGG | 0.552457 | 3.4:-99169496 | MS.gene68230:CDS |
| GGTAAACTTGATTGGAGTCG+TGG | 0.553661 | 3.4:+99169369 | None:intergenic |
| TATCTTTCAACCATCCATCA+AGG | 0.553950 | 3.4:+99168244 | None:intergenic |
| CAAACGTGCACCTGATGTTG+TGG | 0.555390 | 3.4:+99167729 | None:intergenic |
| CCCATAGAACGTGCTTTACA+GGG | 0.559017 | 3.4:+99167437 | None:intergenic |
| ATCAAGTTTACCTTGACGGA+TGG | 0.560773 | 3.4:-99169289 | MS.gene68230:CDS |
| ATCAAGTTTACCTAGATGGA+TGG | 0.561030 | 3.4:-99169358 | MS.gene68230:CDS |
| ATCAAGTTTACCTAGATGGA+TGG | 0.563100 | 3.4:-99169427 | MS.gene68230:CDS |
| TACTGCCACTACCTAGACAT+AGG | 0.566616 | 3.4:-99167616 | MS.gene68230:CDS |
| AAGACATGGCAGAATCAAAA+GGG | 0.567319 | 3.4:-99168119 | MS.gene68230:CDS |
| ACCACCCGTCAAGATAAACT+TGG | 0.569100 | 3.4:+99169150 | None:intergenic |
| TCCATCAAGATAAACTTGGT+TGG | 0.570341 | 3.4:+99168464 | None:intergenic |
| TCCATCAAGATAAACTTGGT+TGG | 0.570341 | 3.4:+99168671 | None:intergenic |
| TACTCCCTATGTCTAGGTAG+TGG | 0.570771 | 3.4:+99167611 | None:intergenic |
| ACTGCCACTACCTAGACATA+GGG | 0.575542 | 3.4:-99167615 | MS.gene68230:CDS |
| GTAAACTTGATTGGAGTCGT+GGG | 0.579561 | 3.4:+99169370 | None:intergenic |
| ACTCGATTGGAGTTGTGGGT+GGG | 0.582962 | 3.4:+99168960 | None:intergenic |
| AGACCTTACTCCCTATGTCT+AGG | 0.584376 | 3.4:+99167605 | None:intergenic |
| CATCAAGGTAAGCCTGATTG+AGG | 0.584619 | 3.4:+99168190 | None:intergenic |
| CATCAAGGTAAGCCTGATTG+AGG | 0.584619 | 3.4:+99169018 | None:intergenic |
| AGTCTTTCAACCAACCATCA+AGG | 0.584877 | 3.4:+99168175 | None:intergenic |
| CTCACAAACGATTCTCCCCA+AGG | 0.585857 | 3.4:-99167904 | MS.gene68230:CDS |
| TATCTTTCAACCATCCATCA+AGG | 0.588448 | 3.4:+99168520 | None:intergenic |
| TATCTTTCAACCATCCATCA+AGG | 0.588448 | 3.4:+99168727 | None:intergenic |
| TATCTTTCAACCATCCATCA+AGG | 0.588448 | 3.4:+99169210 | None:intergenic |
| AGCATGGACTCTAATGAAGT+AGG | 0.591847 | 3.4:+99167814 | None:intergenic |
| CCCGTCAAGATAAACTTGGT+TGG | 0.599307 | 3.4:+99169154 | None:intergenic |
| AAACGTGCACCTGATGTTGT+GGG | 0.607189 | 3.4:+99167730 | None:intergenic |
| ACTATGAACAAATTCAAGCA+TGG | 0.607524 | 3.4:+99167798 | None:intergenic |
| AAAGATAGCCAAGTTGAGCA+AGG | 0.607835 | 3.4:-99168573 | MS.gene68230:CDS |
| AAAGATAGCCAAGTTGAGCA+AGG | 0.607835 | 3.4:-99168780 | MS.gene68230:CDS |
| GTCTTCAAAGTTCTTCTAAG+GGG | 0.613953 | 3.4:-99167586 | MS.gene68230:CDS |
| ATAAACTTGATTAGAGTTTG+GGG | 0.616239 | 3.4:+99168335 | None:intergenic |
| ATAAACTTGATTGGAGTTTG+GGG | 0.619713 | 3.4:+99168404 | None:intergenic |
| ATAAACTTGATTGGAGTTTG+GGG | 0.619713 | 3.4:+99168611 | None:intergenic |
| ACAGGGAAGAAATGGCACAT+AGG | 0.619730 | 3.4:+99167454 | None:intergenic |
| TGGCACATAGGAGCTTCCCC+AGG | 0.628176 | 3.4:+99167466 | None:intergenic |
| ATGGGCACCACTCCCACCAG+AGG | 0.630918 | 3.4:-99167419 | MS.gene68230:CDS |
| TGAATTTGAACCCACAAAAG+GGG | 0.632371 | 3.4:-99167851 | MS.gene68230:CDS |
| ATAAACTTGATTGAAGTTTG+GGG | 0.634939 | 3.4:+99168818 | None:intergenic |
| ACCAAGTTTATCTTGACGGG+TGG | 0.636426 | 3.4:-99169151 | MS.gene68230:CDS |
| GAAGAAAATTGGACAAGACA+TGG | 0.638239 | 3.4:-99168133 | MS.gene68230:CDS |
| GTAAACTTGATTGGAGTTAG+GGG | 0.649022 | 3.4:+99168266 | None:intergenic |
| GTAAACTTGATTGGAGTTAG+GGG | 0.649022 | 3.4:+99168887 | None:intergenic |
| GTAAACTTGATTGGAGTTAG+GGG | 0.649022 | 3.4:+99169301 | None:intergenic |
| TCATGTCAGACGTGTCTAGG+TGG | 0.678767 | 3.4:+99167527 | None:intergenic |
| TGGATGGTTGAAAGATACCA+AGG | 0.679634 | 3.4:-99168238 | MS.gene68230:CDS |
| TTCAAAAGTTGACCATACAG+AGG | 0.702856 | 3.4:-99168088 | MS.gene68230:CDS |
| ACTACTTGGAATGAAGCCTG+GGG | 0.737264 | 3.4:-99167482 | MS.gene68230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTGAAATATAAAATGATT+AGG | + | chr3.4:99169508-99169527 | None:intergenic | 15.0% |
| !!! | ATAACTTTTTTGTTTTCTTC+GGG | + | chr3.4:99167549-99167568 | None:intergenic | 20.0% |
| !!! | CATTTTATATTTCAACTACT+TGG | - | chr3.4:99169511-99169530 | MS.gene68230:CDS | 20.0% |
| !!! | GATAACTTTTTTGTTTTCTT+CGG | + | chr3.4:99167550-99167569 | None:intergenic | 20.0% |
| ! | AGATAAACTTGATTAGAGTT+TGG | + | chr3.4:99168677-99168696 | None:intergenic | 25.0% |
| ! | AGATAAACTTGATTGAAGTT+TGG | + | chr3.4:99168194-99168213 | None:intergenic | 25.0% |
| ! | AGTTGTGTGAATGTTATATT+TGG | + | chr3.4:99169251-99169270 | None:intergenic | 25.0% |
| ! | ATAAACTTGATTAGAGTTTG+GGG | + | chr3.4:99168675-99168694 | None:intergenic | 25.0% |
| ! | ATAAACTTGATTGAAGTTTG+GGG | + | chr3.4:99168192-99168211 | None:intergenic | 25.0% |
| ! | GATAAACTTGATTAGAGTTT+GGG | + | chr3.4:99168676-99168695 | None:intergenic | 25.0% |
| ! | GATAAACTTGATTGAAGTTT+GGG | + | chr3.4:99168193-99168212 | None:intergenic | 25.0% |
| ! | TCTAATCAAGTTTATCTTGA+TGG | - | chr3.4:99168680-99168699 | MS.gene68230:CDS | 25.0% |
| ! | TTCAATCAAGTTTATCTTGA+TGG | - | chr3.4:99168197-99168216 | MS.gene68230:CDS | 25.0% |
| !!! | AGTTTTTTCCTTTTGATCTT+TGG | + | chr3.4:99167961-99167980 | None:intergenic | 25.0% |
| !!! | GGATTTTGTTTTTTGAACTT+GGG | + | chr3.4:99167685-99167704 | None:intergenic | 25.0% |
| !!! | TGGATTTTGTTTTTTGAACT+TGG | + | chr3.4:99167686-99167705 | None:intergenic | 25.0% |
| !!! | TTTAGTTTTTTGTTCTTCAG+TGG | + | chr3.4:99167486-99167505 | None:intergenic | 25.0% |
| AAGTTAGCATATTCTCTGAT+AGG | + | chr3.4:99169010-99169029 | None:intergenic | 30.0% | |
| ACTATGAACAAATTCAAGCA+TGG | + | chr3.4:99169212-99169231 | None:intergenic | 30.0% | |
| ACTATGGATGATCTTTATGT+AGG | - | chr3.4:99168962-99168981 | MS.gene68230:CDS | 30.0% | |
| AGATAAACTTGATTGGAGTT+TGG | + | chr3.4:99168401-99168420 | None:intergenic | 30.0% | |
| AGGTAAACTTGATTAGAGTT+AGG | + | chr3.4:99167780-99167799 | None:intergenic | 30.0% | |
| AGGTAAACTTGATTGTAGTT+AGG | + | chr3.4:99167918-99167937 | None:intergenic | 30.0% | |
| ATAAACTTGATTGGAGTTTG+GGG | + | chr3.4:99168399-99168418 | None:intergenic | 30.0% | |
| ATCAAGTTTATCTTGATGGA+TGG | - | chr3.4:99168201-99168220 | MS.gene68230:CDS | 30.0% | |
| CTATGGATGATCTTTATGTA+GGG | - | chr3.4:99168963-99168982 | MS.gene68230:CDS | 30.0% | |
| GAAAGATACCAAGAATCAAA+AGG | - | chr3.4:99167605-99167624 | MS.gene68230:CDS | 30.0% | |
| GATAAACTTGATTGGAGTTT+GGG | + | chr3.4:99168400-99168419 | None:intergenic | 30.0% | |
| GGTAAACTTGATTAGAGTTA+GGG | + | chr3.4:99167779-99167798 | None:intergenic | 30.0% | |
| GGTAAACTTGATTGTAGTTA+GGG | + | chr3.4:99167917-99167936 | None:intergenic | 30.0% | |
| TACAATCAAGTTTACCTTGA+TGG | - | chr3.4:99167921-99167940 | MS.gene68230:CDS | 30.0% | |
| TCCAATCAAGTTTATCTTGA+TGG | - | chr3.4:99168404-99168423 | MS.gene68230:CDS | 30.0% | |
| TCCATCAAGATAAACTTGAT+TGG | + | chr3.4:99168201-99168220 | None:intergenic | 30.0% | |
| TCTAATCAAGTTTACCTTGA+TGG | - | chr3.4:99167783-99167802 | MS.gene68230:CDS | 30.0% | |
| TCTAATCCAAGTTATCTTGA+TGG | - | chr3.4:99167507-99167526 | MS.gene68230:CDS | 30.0% | |
| ! | GAATTTGTTCATAGTGTTCT+TGG | - | chr3.4:99169217-99169236 | MS.gene68230:CDS | 30.0% |
| ! | GAATTTTGCTTTCTCAACTT+GGG | + | chr3.4:99167754-99167773 | None:intergenic | 30.0% |
| ! | TGAATTTTGCTTTCTCAACT+TGG | + | chr3.4:99167755-99167774 | None:intergenic | 30.0% |
| ! | TGATTTTGCTTTCTCAAGTT+GGG | + | chr3.4:99168168-99168187 | None:intergenic | 30.0% |
| ! | TGGATTTTTCTTTCTCAACA+TGG | + | chr3.4:99168100-99168119 | None:intergenic | 30.0% |
| ! | TTGATTTTGCTTTCTCAAGT+TGG | + | chr3.4:99168169-99168188 | None:intergenic | 30.0% |
| !! | AGTCTTTTCCTTTTGATTCT+TGG | + | chr3.4:99167616-99167635 | None:intergenic | 30.0% |
| !! | ATCCTTTGAGATTTCCAAAA+TGG | + | chr3.4:99169314-99169333 | None:intergenic | 30.0% |
| !!! | ATGTAGTCAGCTACTTTTTT+TGG | + | chr3.4:99169037-99169056 | None:intergenic | 30.0% |
| !!! | CAAGTTAGCTTTTTTCACTA+TGG | - | chr3.4:99168946-99168965 | MS.gene68230:CDS | 30.0% |
| AACCATCCATCAAGATAACT+TGG | + | chr3.4:99167516-99167535 | None:intergenic | 35.0% | |
| AACTTGATTGTAGTTAGGGT+TGG | + | chr3.4:99167913-99167932 | None:intergenic | 35.0% | |
| AAGACATGGCAGAATCAAAA+GGG | - | chr3.4:99168888-99168907 | MS.gene68230:CDS | 35.0% | |
| ACCAAGTTTATCTTGATGGA+TGG | - | chr3.4:99168339-99168358 | MS.gene68230:CDS | 35.0% | |
| ACCAATCAAGTTTACCTAGA+TGG | - | chr3.4:99167576-99167595 | MS.gene68230:CDS | 35.0% | |
| ACCATCCATCAAGATAAACT+TGG | + | chr3.4:99168067-99168086 | None:intergenic | 35.0% | |
| AGATAAACTTGGTTGGAGTT+TGG | + | chr3.4:99167849-99167868 | None:intergenic | 35.0% | |
| AGGATATCTATGCTCCTAAA+TGG | - | chr3.4:99169329-99169348 | MS.gene68230:CDS | 35.0% | |
| AGGTAAACTTGATTGGAGTT+AGG | + | chr3.4:99167711-99167730 | None:intergenic | 35.0% | |
| AGGTCTTCAAAGTTCTTCTA+AGG | - | chr3.4:99169419-99169438 | MS.gene68230:CDS | 35.0% | |
| ATAAACTCGATTGGAGTTGT+GGG | + | chr3.4:99168054-99168073 | None:intergenic | 35.0% | |
| ATAAACTTGGTTGGAGTTTG+GGG | + | chr3.4:99167847-99167866 | None:intergenic | 35.0% | |
| ATCAAGTTTACCTAGATGGA+TGG | - | chr3.4:99167580-99167599 | MS.gene68230:CDS | 35.0% | |
| ATCAAGTTTACCTTGATGGA+TGG | - | chr3.4:99167787-99167806 | MS.gene68230:CDS | 35.0% | |
| ATCCAAGTTATCTTGATGGA+TGG | - | chr3.4:99167511-99167530 | MS.gene68230:CDS | 35.0% | |
| ATCGAGTTTATCTTGATGGA+TGG | - | chr3.4:99168063-99168082 | MS.gene68230:CDS | 35.0% | |
| GAAAGACACCAAAGATCAAA+AGG | - | chr3.4:99167950-99167969 | MS.gene68230:CDS | 35.0% | |
| GAAAGATACCAAGGATCAAA+TGG | - | chr3.4:99168778-99168797 | MS.gene68230:CDS | 35.0% | |
| GAAGAAAATTGGACAAGACA+TGG | - | chr3.4:99168874-99168893 | MS.gene68230:CDS | 35.0% | |
| GATAAACTTGGTTGGAGTTT+GGG | + | chr3.4:99167848-99167867 | None:intergenic | 35.0% | |
| GGATATCTATGCTCCTAAAT+GGG | - | chr3.4:99169330-99169349 | MS.gene68230:CDS | 35.0% | |
| GGTAAACTTGATTGGAGTTA+GGG | + | chr3.4:99167710-99167729 | None:intergenic | 35.0% | |
| GGTCTTCAAAGTTCTTCTAA+GGG | - | chr3.4:99169420-99169439 | MS.gene68230:CDS | 35.0% | |
| GTAAACTTGATTGGAGTTAG+GGG | + | chr3.4:99167709-99167728 | None:intergenic | 35.0% | |
| GTCTTCAAAGTTCTTCTAAG+GGG | - | chr3.4:99169421-99169440 | MS.gene68230:CDS | 35.0% | |
| GTGAATTTGAACCCACAAAA+GGG | - | chr3.4:99169155-99169174 | MS.gene68230:CDS | 35.0% | |
| TAATGAAGTAGGACAAGCTT+TGG | + | chr3.4:99169185-99169204 | None:intergenic | 35.0% | |
| TATCCTTTAACCATCCATCT+AGG | + | chr3.4:99167662-99167681 | None:intergenic | 35.0% | |
| TATCTTTCAACCATCCATCA+AGG | + | chr3.4:99167800-99167819 | None:intergenic | 35.0% | |
| TATCTTTCAACCATCCATCT+AGG | + | chr3.4:99167593-99167612 | None:intergenic | 35.0% | |
| TCCAACCAAGTTTATCTTGA+CGG | - | chr3.4:99167852-99167871 | MS.gene68230:CDS | 35.0% | |
| TCCAACCAAGTTTATCTTGA+TGG | - | chr3.4:99167852-99167871 | MS.gene68230:CDS | 35.0% | |
| TCCAATCAAGTTTACCTAGA+TGG | - | chr3.4:99167645-99167664 | MS.gene68230:CDS | 35.0% | |
| TCCAATCAAGTTTACCTTGA+CGG | - | chr3.4:99167714-99167733 | MS.gene68230:CDS | 35.0% | |
| TCCAATCAAGTTTACCTTGA+TGG | - | chr3.4:99167714-99167733 | MS.gene68230:CDS | 35.0% | |
| TCCAATCGAGTTTATCTTGA+TGG | - | chr3.4:99168059-99168078 | MS.gene68230:CDS | 35.0% | |
| TCCATCAAGATAAACTCGAT+TGG | + | chr3.4:99168063-99168082 | None:intergenic | 35.0% | |
| TCCATCAAGATAAACTTGGT+TGG | + | chr3.4:99168339-99168358 | None:intergenic | 35.0% | |
| TCCATCAAGGTAAACTTGAT+TGG | + | chr3.4:99167787-99167806 | None:intergenic | 35.0% | |
| TCCATCTAGGTAAACTTGAT+TGG | + | chr3.4:99167580-99167599 | None:intergenic | 35.0% | |
| TGAATTTGAACCCACAAAAG+GGG | - | chr3.4:99169156-99169175 | MS.gene68230:CDS | 35.0% | |
| TGAGAGAGAATAGTTGAAGA+AGG | + | chr3.4:99169087-99169106 | None:intergenic | 35.0% | |
| TGTGAATTTGAACCCACAAA+AGG | - | chr3.4:99169154-99169173 | MS.gene68230:CDS | 35.0% | |
| TTACCTAGATGGATGGTTAA+AGG | - | chr3.4:99167656-99167675 | MS.gene68230:CDS | 35.0% | |
| TTCAAAAGTTGACCATACAG+AGG | - | chr3.4:99168919-99168938 | MS.gene68230:CDS | 35.0% | |
| ! | ATGGCTGGTTAAAAGATAGT+CGG | - | chr3.4:99168009-99168028 | MS.gene68230:CDS | 35.0% |
| ! | GTCTTGTCCAATTTTCTTCA+TGG | + | chr3.4:99168873-99168892 | None:intergenic | 35.0% |
| ! | TAGTAAAGAGCATAAGGGTA+AGG | + | chr3.4:99169373-99169392 | None:intergenic | 35.0% |
| ! | TATCTTTTAACCAGCCATCA+AGG | + | chr3.4:99168007-99168026 | None:intergenic | 35.0% |
| ! | TCGATTTTGCTTTCTCAACT+TGG | + | chr3.4:99167824-99167843 | None:intergenic | 35.0% |
| ! | TGGATTTTACTTGCTCAACT+TGG | + | chr3.4:99168721-99168740 | None:intergenic | 35.0% |
| ! | TGGATTTTTCTTTCTCAGCA+TGG | + | chr3.4:99167893-99167912 | None:intergenic | 35.0% |
| ! | TGGTTTTTCCATTTGATCCT+TGG | + | chr3.4:99168789-99168808 | None:intergenic | 35.0% |
| ! | TTTGCAGAACTACACCATTT+TGG | - | chr3.4:99169297-99169316 | MS.gene68230:CDS | 35.0% |
| !! | CACCATTTTGGAAATCTCAA+AGG | - | chr3.4:99169309-99169328 | MS.gene68230:CDS | 35.0% |
| !! | GTATGGTCAACTTTTGAAGA+TGG | + | chr3.4:99168917-99168936 | None:intergenic | 35.0% |
| AACTACTTGGAATGAAGCCT+GGG | - | chr3.4:99169524-99169543 | MS.gene68230:CDS | 40.0% | |
| AACTATCCACAACCTCAATC+AGG | - | chr3.4:99167977-99167996 | MS.gene68230:CDS | 40.0% | |
| AACTTGATTGGAGTTAGGAG+TGG | + | chr3.4:99168258-99168277 | None:intergenic | 40.0% | |
| ACCAATACACAACCTCAATC+AGG | - | chr3.4:99168805-99168824 | MS.gene68230:CDS | 40.0% | |
| AGCATGGACTCTAATGAAGT+AGG | + | chr3.4:99169196-99169215 | None:intergenic | 40.0% | |
| AGTCTTTCAACCAACCATCA+AGG | + | chr3.4:99168835-99168854 | None:intergenic | 40.0% | |
| ATCAAGTTTACCTTGACGGA+TGG | - | chr3.4:99167718-99167737 | MS.gene68230:CDS | 40.0% | |
| CAAGACATGGCAGAATCAAA+AGG | - | chr3.4:99168887-99168906 | MS.gene68230:CDS | 40.0% | |
| CCAACCAAGTTTATCTTGAC+GGG | - | chr3.4:99167853-99167872 | MS.gene68230:CDS | 40.0% | |
| CTAACTTGAATGCCTCTGTA+TGG | + | chr3.4:99168934-99168953 | None:intergenic | 40.0% | |
| GAGAATAGTTGAAGAAGGCT+TGG | + | chr3.4:99169082-99169101 | None:intergenic | 40.0% | |
| GATAAACTCGATTGGAGTTG+TGG | + | chr3.4:99168055-99168074 | None:intergenic | 40.0% | |
| GCCATCAAGGTAAACTTGAT+TGG | + | chr3.4:99167925-99167944 | None:intergenic | 40.0% | |
| GCGAACTCCATGAAGAAAAT+TGG | - | chr3.4:99168863-99168882 | MS.gene68230:CDS | 40.0% | |
| GGGTCAATATGGAGACATAA+TGG | - | chr3.4:99169441-99169460 | MS.gene68230:CDS | 40.0% | |
| GTAAACTTGATTGGAGTCGT+GGG | + | chr3.4:99167640-99167659 | None:intergenic | 40.0% | |
| GTCTTTCATGTCTTCACCTT+GGG | + | chr3.4:99169122-99169141 | None:intergenic | 40.0% | |
| TCCGTCAAGGTAAACTTGAT+TGG | + | chr3.4:99167718-99167737 | None:intergenic | 40.0% | |
| TCGATCTTGCTTTCTCAACT+TGG | + | chr3.4:99168376-99168395 | None:intergenic | 40.0% | |
| TCTTTCATGTCTTCACCTTG+GGG | + | chr3.4:99169121-99169140 | None:intergenic | 40.0% | |
| TGGATGGTTGAAAGATACCA+AGG | - | chr3.4:99167596-99167615 | MS.gene68230:CDS | 40.0% | |
| TGTCTTTCATGTCTTCACCT+TGG | + | chr3.4:99169123-99169142 | None:intergenic | 40.0% | |
| TTGATCTTGCCTTCTCAACT+TGG | + | chr3.4:99168307-99168326 | None:intergenic | 40.0% | |
| ! | AAAGATAGCCAAGTTGAGCA+AGG | - | chr3.4:99168227-99168246 | MS.gene68230:CDS | 40.0% |
| ! | ATCAAGTTTACCTTGATGGC+TGG | - | chr3.4:99167925-99167944 | MS.gene68230:CDS | 40.0% |
| ! | CTTGATGGATGGTTGAAAGA+TGG | - | chr3.4:99167522-99167541 | MS.gene68230:CDS | 40.0% |
| ! | GAAAGATAGCCAAGTTGAGA+AGG | - | chr3.4:99167812-99167831 | MS.gene68230:CDS | 40.0% |
| ! | GGCAGTAGTAAAGAGCATAA+GGG | + | chr3.4:99169378-99169397 | None:intergenic | 40.0% |
| ! | GTTCTTCTAAGGGGTCAATA+TGG | - | chr3.4:99169430-99169449 | MS.gene68230:CDS | 40.0% |
| ! | TATCTTTTAGCCATCCGTCA+AGG | + | chr3.4:99167731-99167750 | None:intergenic | 40.0% |
| ! | TGGATTTTCCTTGCTCAACT+TGG | + | chr3.4:99168238-99168257 | None:intergenic | 40.0% |
| ! | TGGCAGTAGTAAAGAGCATA+AGG | + | chr3.4:99169379-99169398 | None:intergenic | 40.0% |
| ! | TGGCTGGTTAAAAGATAGTC+GGG | - | chr3.4:99168010-99168029 | MS.gene68230:CDS | 40.0% |
| !! | GGAGACATAATGGATGCTTT+GGG | - | chr3.4:99169451-99169470 | MS.gene68230:CDS | 40.0% |
| !! | GGTAAACTTGATTGGTGTTG+TGG | + | chr3.4:99167572-99167591 | None:intergenic | 40.0% |
| !! | TGGAGACATAATGGATGCTT+TGG | - | chr3.4:99169450-99169469 | MS.gene68230:CDS | 40.0% |
| !! | TGTTTTTAAGCCAGCCATCA+AGG | + | chr3.4:99167461-99167480 | None:intergenic | 40.0% |
| AAACGTGCACCTGATGTTGT+GGG | + | chr3.4:99169280-99169299 | None:intergenic | 45.0% | |
| AACTTGATTGGAGTTAGGGG+TGG | + | chr3.4:99167706-99167725 | None:intergenic | 45.0% | |
| ACAGGGAAGAAATGGCACAT+AGG | + | chr3.4:99169556-99169575 | None:intergenic | 45.0% | |
| ACCAAGTTTATCTTGACGGG+TGG | - | chr3.4:99167856-99167875 | MS.gene68230:CDS | 45.0% | |
| ACCACCCGTCAAGATAAACT+TGG | + | chr3.4:99167860-99167879 | None:intergenic | 45.0% | |
| ACTACTTGGAATGAAGCCTG+GGG | - | chr3.4:99169525-99169544 | MS.gene68230:CDS | 45.0% | |
| ACTAGCTATCCCACAACATC+AGG | - | chr3.4:99169268-99169287 | MS.gene68230:CDS | 45.0% | |
| ACTGCCACTACCTAGACATA+GGG | - | chr3.4:99169392-99169411 | MS.gene68230:CDS | 45.0% | |
| AGACCTTACTCCCTATGTCT+AGG | + | chr3.4:99169405-99169424 | None:intergenic | 45.0% | |
| CAACTACTTGGAATGAAGCC+TGG | - | chr3.4:99169523-99169542 | MS.gene68230:CDS | 45.0% | |
| CATCAAGGTAAGCCTGATTG+AGG | + | chr3.4:99167992-99168011 | None:intergenic | 45.0% | |
| CCCATAGAACGTGCTTTACA+GGG | + | chr3.4:99169573-99169592 | None:intergenic | 45.0% | |
| CCCGTCAAGATAAACTTGGT+TGG | + | chr3.4:99167856-99167875 | None:intergenic | 45.0% | |
| CCCTGTAAAGCACGTTCTAT+GGG | - | chr3.4:99169570-99169589 | MS.gene68230:CDS | 45.0% | |
| CGTGCTTTACAGGGAAGAAA+TGG | + | chr3.4:99169564-99169583 | None:intergenic | 45.0% | |
| CTACCTAGACATAGGGAGTA+AGG | - | chr3.4:99169399-99169418 | MS.gene68230:CDS | 45.0% | |
| CTCAATCAGGCTTACCTTGA+TGG | - | chr3.4:99167990-99168009 | MS.gene68230:CDS | 45.0% | |
| GATTCATGTCAGACGTGTCT+AGG | + | chr3.4:99169486-99169505 | None:intergenic | 45.0% | |
| GCCTGATTGAGGTTGTGTAT+TGG | + | chr3.4:99168809-99168828 | None:intergenic | 45.0% | |
| GGTAAACTTGATTGGAGTCG+TGG | + | chr3.4:99167641-99167660 | None:intergenic | 45.0% | |
| GTTGATCAGCCTTACCTTGA+TGG | - | chr3.4:99167444-99167463 | MS.gene68230:CDS | 45.0% | |
| TACTCCCTATGTCTAGGTAG+TGG | + | chr3.4:99169399-99169418 | None:intergenic | 45.0% | |
| TACTGCCACTACCTAGACAT+AGG | - | chr3.4:99169391-99169410 | MS.gene68230:CDS | 45.0% | |
| TCCCTGTAAAGCACGTTCTA+TGG | - | chr3.4:99169569-99169588 | MS.gene68230:CDS | 45.0% | |
| TGTCTTTCAACCAGCCATCA+AGG | + | chr3.4:99167938-99167957 | None:intergenic | 45.0% | |
| TTAAGCCAGCCATCAAGGTA+AGG | + | chr3.4:99167456-99167475 | None:intergenic | 45.0% | |
| ! | ATCAGGCTTACCTTGATGGT+TGG | - | chr3.4:99168822-99168841 | MS.gene68230:CDS | 45.0% |
| AACTCGATTGGAGTTGTGGG+TGG | + | chr3.4:99168051-99168070 | None:intergenic | 50.0% | |
| ACTCGATTGGAGTTGTGGGT+GGG | + | chr3.4:99168050-99168069 | None:intergenic | 50.0% | |
| AGAGCATAAGGGTAAGGCCT+AGG | + | chr3.4:99169367-99169386 | None:intergenic | 50.0% | |
| CAAACGTGCACCTGATGTTG+TGG | + | chr3.4:99169281-99169300 | None:intergenic | 50.0% | |
| CATCTTTCAGCCAGCCATCA+AGG | + | chr3.4:99168145-99168164 | None:intergenic | 50.0% | |
| CTCACAAACGATTCTCCCCA+AGG | - | chr3.4:99169103-99169122 | MS.gene68230:CDS | 50.0% | |
| GAGCATAAGGGTAAGGCCTA+GGG | + | chr3.4:99169366-99169385 | None:intergenic | 50.0% | |
| GCCCATAGAACGTGCTTTAC+AGG | + | chr3.4:99169574-99169593 | None:intergenic | 50.0% | |
| GGGTGACAAGCTACCCATTT+AGG | + | chr3.4:99169346-99169365 | None:intergenic | 50.0% | |
| GGTAAGCCTGATTGAGGTTG+TGG | + | chr3.4:99167986-99168005 | None:intergenic | 50.0% | |
| TCATGTCAGACGTGTCTAGG+TGG | + | chr3.4:99169483-99169502 | None:intergenic | 50.0% | |
| ! | AAGGCTTGGTAGTTGCGACT+TGG | + | chr3.4:99169068-99169087 | None:intergenic | 50.0% |
| ! | AATGGGTAGCTTGTCACCCT+AGG | - | chr3.4:99169347-99169366 | MS.gene68230:CDS | 50.0% |
| ! | ATCAGCCTTACCTTGATGGC+TGG | - | chr3.4:99167448-99167467 | MS.gene68230:CDS | 50.0% |
| ! | ATCAGGCTTACCTTGATGGC+TGG | - | chr3.4:99167994-99168013 | MS.gene68230:CDS | 50.0% |
| ! | GCTTTGGTCTCCCCTTTTGT+GGG | + | chr3.4:99169169-99169188 | None:intergenic | 50.0% |
| ! | GGTAGTTGCGACTTGGAGAA+AGG | + | chr3.4:99169061-99169080 | None:intergenic | 50.0% |
| !! | AGCTTTGGTCTCCCCTTTTG+TGG | + | chr3.4:99169170-99169189 | None:intergenic | 50.0% |
| TGGCACATAGGAGCTTCCCC+AGG | + | chr3.4:99169544-99169563 | None:intergenic | 60.0% | |
| ATGGGCACCACTCCCACCAG+AGG | - | chr3.4:99169588-99169607 | MS.gene68230:CDS | 65.0% | |
| ! | TTGGTGGCCTCTGGTGGGAG+TGG | + | chr3.4:99169598-99169617 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 99167408 | 99169621 | 99167408 | ID=MS.gene68230 |
| chr3.4 | mRNA | 99167408 | 99169621 | 99167408 | ID=MS.gene68230.t1;Parent=MS.gene68230 |
| chr3.4 | exon | 99167408 | 99169621 | 99167408 | ID=MS.gene68230.t1.exon1;Parent=MS.gene68230.t1 |
| chr3.4 | CDS | 99167408 | 99169621 | 99167408 | ID=cds.MS.gene68230.t1;Parent=MS.gene68230.t1 |
| Gene Sequence |
| Protein sequence |
