Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018779.01.T01 | XP_013454882.1 | 97.059 | 204 | 6 | 0 | 11 | 214 | 48 | 251 | 3.47E-138 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018779.01.T01 | Q8RX71 | 51.741 | 201 | 96 | 1 | 14 | 214 | 70 | 269 | 5.94E-61 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018779.01.T01 | A0A072UST0 | 97.059 | 204 | 6 | 0 | 11 | 214 | 48 | 251 | 1.66e-138 | 397 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048404.01 | MsG0480018779.01 | 0.822399 | 2.418812e-53 | 2.022448e-50 |
| MsG0080048463.01 | MsG0480018779.01 | 0.801342 | 9.420630e-49 | 4.488092e-46 |
| MsG0080048618.01 | MsG0480018779.01 | 0.801630 | 8.221937e-49 | 3.945505e-46 |
| MsG0080048826.01 | MsG0480018779.01 | 0.821731 | 3.453930e-53 | 2.833200e-50 |
| MsG0180000470.01 | MsG0480018779.01 | 0.806635 | 7.475763e-50 | 4.077870e-47 |
| MsG0180000550.01 | MsG0480018779.01 | 0.821578 | 3.748304e-53 | 3.061280e-50 |
| MsG0180000777.01 | MsG0480018779.01 | 0.829462 | 5.078999e-55 | 5.201820e-52 |
| MsG0180001063.01 | MsG0480018779.01 | 0.821791 | 3.346725e-53 | 2.749999e-50 |
| MsG0180002794.01 | MsG0480018779.01 | 0.803402 | 3.546212e-49 | 1.780443e-46 |
| MsG0180003686.01 | MsG0480018779.01 | 0.802059 | 6.714889e-49 | 3.257637e-46 |
| MsG0180003773.01 | MsG0480018779.01 | 0.823588 | 1.277697e-53 | 1.104819e-50 |
| MsG0180004108.01 | MsG0480018779.01 | 0.809692 | 1.668878e-50 | 9.865047e-48 |
| MsG0180004389.01 | MsG0480018779.01 | 0.808420 | 3.124808e-50 | 1.785866e-47 |
| MsG0180004765.01 | MsG0480018779.01 | 0.836706 | 7.997654e-57 | 1.015997e-53 |
| MsG0180004779.01 | MsG0480018779.01 | 0.806676 | 7.329287e-50 | 4.002187e-47 |
| MsG0180004926.01 | MsG0480018779.01 | 0.808953 | 2.403343e-50 | 1.392865e-47 |
| MsG0180005169.01 | MsG0480018779.01 | 0.802657 | 5.056224e-49 | 2.490563e-46 |
| MsG0180005193.01 | MsG0480018779.01 | 0.808144 | 3.577166e-50 | 2.029660e-47 |
| MsG0180005990.01 | MsG0480018779.01 | 0.825809 | 3.827827e-54 | 3.526253e-51 |
| MsG0180006224.01 | MsG0480018779.01 | 0.807554 | 4.776758e-50 | 2.668517e-47 |
| MsG0280006309.01 | MsG0480018779.01 | 0.808384 | 3.180787e-50 | 1.816187e-47 |
| MsG0280010698.01 | MsG0480018779.01 | 0.803618 | 3.199041e-49 | 1.615035e-46 |
| MsG0280010712.01 | MsG0480018779.01 | 0.806606 | 7.579365e-50 | 4.131529e-47 |
| MsG0280010722.01 | MsG0480018779.01 | 0.833818 | 4.285115e-56 | 4.991765e-53 |
| MsG0280010778.01 | MsG0480018779.01 | 0.811282 | 7.569780e-51 | 4.666219e-48 |
| MsG0280010980.01 | MsG0480018779.01 | 0.800249 | 1.574831e-48 | 7.297658e-46 |
| MsG0280011109.01 | MsG0480018779.01 | 0.807284 | 5.448741e-50 | 3.022818e-47 |
| MsG0280011175.01 | MsG0480018779.01 | 0.838290 | 3.140716e-57 | 4.187167e-54 |
| MsG0380011581.01 | MsG0480018779.01 | 0.827975 | 1.162679e-54 | 1.140212e-51 |
| MsG0380011609.01 | MsG0480018779.01 | 0.821273 | 4.406913e-53 | 3.568695e-50 |
| MsG0380012460.01 | MsG0480018779.01 | 0.802197 | 6.288441e-49 | 3.061402e-46 |
| MsG0380013085.01 | MsG0480018779.01 | 0.815476 | 9.067684e-52 | 6.258667e-49 |
| MsG0380014173.01 | MsG0480018779.01 | 0.808012 | 3.817893e-50 | 2.158592e-47 |
| MsG0380014296.01 | MsG0480018779.01 | 0.800561 | 1.360245e-48 | 6.353404e-46 |
| MsG0380014537.01 | MsG0480018779.01 | 0.817213 | 3.705874e-52 | 2.682222e-49 |
| MsG0380014876.01 | MsG0480018779.01 | 0.809253 | 2.073438e-50 | 1.211411e-47 |
| MsG0480018465.01 | MsG0480018779.01 | 0.810496 | 1.119992e-50 | 6.761381e-48 |
| MsG0480018653.01 | MsG0480018779.01 | 0.807862 | 4.107630e-50 | 2.313193e-47 |
| MsG0480018779.01 | MsG0480019125.01 | 0.800894 | 1.163515e-48 | 5.480895e-46 |
| MsG0480018779.01 | MsG0480019780.01 | 0.802088 | 6.622341e-49 | 3.215180e-46 |
| MsG0480018779.01 | MsG0480019795.01 | 0.830703 | 2.529979e-55 | 2.686388e-52 |
| MsG0480018779.01 | MsG0480021750.01 | 0.819259 | 1.275693e-52 | 9.767958e-50 |
| MsG0480018779.01 | MsG0480021796.01 | 0.805129 | 1.549200e-49 | 8.131533e-47 |
| MsG0480018779.01 | MsG0480021838.01 | 0.812704 | 3.708770e-51 | 2.374653e-48 |
| MsG0480018779.01 | MsG0480021869.01 | 0.803272 | 3.773986e-49 | 1.888390e-46 |
| MsG0480018779.01 | MsG0480021959.01 | 0.802661 | 5.047157e-49 | 2.486329e-46 |
| MsG0480018779.01 | MsG0480022068.01 | 0.809512 | 1.824263e-50 | 1.073171e-47 |
| MsG0480018779.01 | MsG0480022985.01 | 0.809052 | 2.289269e-50 | 1.330303e-47 |
| MsG0480018779.01 | MsG0480023163.01 | 0.801116 | 1.047985e-48 | 4.964464e-46 |
| MsG0480018779.01 | MsG0480023221.01 | 0.803269 | 3.778065e-49 | 1.890342e-46 |
| MsG0480018779.01 | MsG0480023251.01 | 0.812590 | 3.926695e-51 | 2.506728e-48 |
| MsG0480018779.01 | MsG0480023489.01 | 0.815697 | 8.095028e-52 | 5.620919e-49 |
| MsG0480018779.01 | MsG0480023636.01 | 0.848618 | 5.463497e-60 | 1.008440e-56 |
| MsG0480018779.01 | MsG0580024698.01 | 0.817529 | 3.146167e-52 | 2.296871e-49 |
| MsG0480018779.01 | MsG0580024781.01 | 0.801676 | 8.047732e-49 | 3.866344e-46 |
| MsG0480018779.01 | MsG0580026086.01 | 0.810537 | 1.097445e-50 | 6.632495e-48 |
| MsG0480018779.01 | MsG0580028634.01 | 0.826826 | 2.192606e-54 | 2.079137e-51 |
| MsG0480018779.01 | MsG0680030880.01 | 0.813153 | 2.956540e-51 | 1.915695e-48 |
| MsG0480018779.01 | MsG0680030882.01 | 0.803162 | 3.975658e-49 | 1.983790e-46 |
| MsG0480018779.01 | MsG0680031361.01 | 0.816275 | 6.012981e-52 | 4.241977e-49 |
| MsG0480018779.01 | MsG0680031488.01 | 0.807832 | 4.168748e-50 | 2.345826e-47 |
| MsG0480018779.01 | MsG0680034230.01 | 0.800058 | 1.722030e-48 | 7.941280e-46 |
| MsG0480018779.01 | MsG0780035957.01 | 0.811512 | 6.745865e-51 | 4.184081e-48 |
| MsG0480018779.01 | MsG0780036183.01 | 0.836672 | 8.156017e-57 | 1.035049e-53 |
| MsG0480018779.01 | MsG0780036190.01 | 0.808625 | 2.824577e-50 | 1.622849e-47 |
| MsG0480018779.01 | MsG0780036288.01 | 0.824486 | 7.864935e-54 | 6.975921e-51 |
| MsG0480018779.01 | MsG0780037292.01 | 0.804686 | 1.917343e-49 | 9.949505e-47 |
| MsG0480018779.01 | MsG0780038401.01 | 0.826694 | 2.357419e-54 | 2.226956e-51 |
| MsG0480018779.01 | MsG0780039443.01 | 0.809714 | 1.650757e-50 | 9.763822e-48 |
| MsG0480018779.01 | MsG0780040596.01 | 0.811509 | 6.756392e-51 | 4.190262e-48 |
| MsG0480018779.01 | MsG0780041416.01 | 0.823040 | 1.715573e-53 | 1.460766e-50 |
| MsG0480018779.01 | MsG0780041435.01 | 0.840330 | 9.280230e-58 | 1.317368e-54 |
| MsG0480018779.01 | MsG0780041475.01 | 0.825708 | 4.046094e-54 | 3.716491e-51 |
| MsG0480018779.01 | MsG0780041507.01 | 0.832553 | 8.854003e-56 | 9.930338e-53 |
| MsG0480018779.01 | MsG0880042031.01 | 0.823434 | 1.388091e-53 | 1.194997e-50 |
| MsG0480018779.01 | MsG0880042434.01 | 0.816978 | 4.185587e-52 | 3.010186e-49 |
| MsG0480018779.01 | MsG0880042520.01 | 0.816539 | 5.250246e-52 | 3.730373e-49 |
| MsG0480018779.01 | MsG0880042622.01 | 0.814668 | 1.369992e-51 | 9.249603e-49 |
| MsG0480018779.01 | MsG0880042656.01 | 0.820715 | 5.923050e-53 | 4.722714e-50 |
| MsG0480018779.01 | MsG0880042700.01 | 0.800066 | 1.715857e-48 | 7.914412e-46 |
| MsG0480018779.01 | MsG0880043479.01 | 0.800049 | 1.729644e-48 | 7.974462e-46 |
| MsG0480018779.01 | MsG0880044728.01 | 0.813293 | 2.754301e-51 | 1.791562e-48 |
| MsG0480018779.01 | MsG0880045362.01 | 0.803976 | 2.696066e-49 | 1.373750e-46 |
| MsG0480018779.01 | MsG0880045371.01 | 0.809157 | 2.173786e-50 | 1.266785e-47 |
| MsG0480018779.01 | MsG0880045765.01 | 0.839347 | 1.672766e-57 | 2.303702e-54 |
| MsG0480018779.01 | MsG0880045937.01 | 0.830958 | 2.189956e-55 | 2.342847e-52 |
| MsG0480018779.01 | MsG0880045992.01 | 0.802878 | 4.552637e-49 | 2.255212e-46 |
| MsG0480018779.01 | MsG0880046620.01 | 0.811461 | 6.922211e-51 | 4.287501e-48 |
| MsG0480018779.01 | MsG0880047267.01 | 0.816754 | 4.697967e-52 | 3.357831e-49 |
| MsG0380015555.01 | MsG0480018779.01 | 0.825745 | 3.963745e-54 | 3.644820e-51 |
| MsG0380015930.01 | MsG0480018779.01 | 0.804672 | 1.930463e-49 | 1.001376e-46 |
| MsG0380016064.01 | MsG0480018779.01 | 0.803957 | 2.720194e-49 | 1.385379e-46 |
| MsG0380016133.01 | MsG0480018779.01 | 0.832481 | 9.224362e-56 | 1.032348e-52 |
| MsG0380016285.01 | MsG0480018779.01 | 0.825959 | 3.525961e-54 | 3.262036e-51 |
| MsG0380016407.01 | MsG0480018779.01 | 0.807753 | 4.333820e-50 | 2.433708e-47 |
| MsG0380016529.01 | MsG0480018779.01 | 0.834351 | 3.151453e-56 | 3.730175e-53 |
| MsG0380016740.01 | MsG0480018779.01 | 0.806124 | 9.578214e-50 | 5.157401e-47 |
| MsG0380016910.01 | MsG0480018779.01 | 0.815821 | 7.596634e-52 | 5.292571e-49 |
| MsG0380017085.01 | MsG0480018779.01 | 0.830111 | 3.530528e-55 | 3.684563e-52 |
| MsG0380017202.01 | MsG0480018779.01 | 0.813757 | 2.178118e-51 | 1.434722e-48 |
| MsG0380017461.01 | MsG0480018779.01 | 0.821986 | 3.015880e-53 | 2.491848e-50 |
| MsG0380017543.01 | MsG0480018779.01 | 0.820341 | 7.219613e-53 | 5.697139e-50 |
| MsG0380017589.01 | MsG0480018779.01 | 0.813656 | 2.292163e-51 | 1.505766e-48 |
| MsG0380018075.01 | MsG0480018779.01 | 0.807050 | 6.108106e-50 | 3.367913e-47 |
| MsG0480018214.01 | MsG0480018779.01 | 0.802206 | 6.262228e-49 | 3.049346e-46 |
| MsG0480018236.01 | MsG0480018779.01 | 0.806051 | 9.923234e-50 | 5.333267e-47 |
| MsG0480018319.01 | MsG0480018779.01 | 0.832760 | 7.862768e-56 | 8.873206e-53 |
| MsG0280006491.01 | MsG0480018779.01 | 0.816778 | 4.640431e-52 | 3.318863e-49 |
| MsG0280006593.01 | MsG0480018779.01 | 0.812105 | 5.010887e-51 | 3.157491e-48 |
| MsG0280006937.01 | MsG0480018779.01 | 0.812380 | 4.364133e-51 | 2.770563e-48 |
| MsG0280007203.01 | MsG0480018779.01 | 0.812282 | 4.586123e-51 | 2.903824e-48 |
| MsG0280007547.01 | MsG0480018779.01 | 0.860460 | 2.033561e-63 | 5.563353e-60 |
| MsG0280008112.01 | MsG0480018779.01 | 0.822491 | 2.302725e-53 | 1.930295e-50 |
| MsG0280010434.01 | MsG0480018779.01 | 0.817485 | 3.218946e-52 | 2.347248e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018779.01.T01 | MTR_4g017810 | 97.059 | 204 | 6 | 0 | 11 | 214 | 48 | 251 | 4.20e-142 | 397 |
| MsG0480018779.01.T01 | MTR_7g069610 | 65.000 | 160 | 51 | 1 | 8 | 167 | 66 | 220 | 2.75e-63 | 196 |
| MsG0480018779.01.T01 | MTR_0086s0010 | 51.299 | 154 | 75 | 0 | 14 | 167 | 83 | 236 | 2.59e-41 | 144 |
| MsG0480018779.01.T01 | MTR_1g101440 | 47.097 | 155 | 82 | 0 | 14 | 168 | 71 | 225 | 8.24e-38 | 134 |
| MsG0480018779.01.T01 | MTR_2g018860 | 37.143 | 175 | 105 | 1 | 12 | 186 | 32 | 201 | 3.84e-33 | 118 |
| MsG0480018779.01.T01 | MTR_2g018860 | 35.484 | 186 | 115 | 1 | 1 | 186 | 63 | 243 | 3.80e-31 | 114 |
| MsG0480018779.01.T01 | MTR_4g102740 | 36.058 | 208 | 120 | 3 | 14 | 214 | 79 | 280 | 5.81e-29 | 109 |
| MsG0480018779.01.T01 | MTR_2g032910 | 54.717 | 53 | 24 | 0 | 79 | 131 | 1 | 53 | 1.10e-11 | 58.5 |
| MsG0480018779.01.T01 | MTR_6g022020 | 51.667 | 60 | 29 | 0 | 11 | 70 | 80 | 139 | 8.26e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018779.01.T01 | AT3G51780 | 51.741 | 201 | 96 | 1 | 14 | 214 | 70 | 269 | 6.06e-62 | 194 |
| MsG0480018779.01.T01 | AT5G52060 | 45.455 | 154 | 84 | 0 | 14 | 167 | 89 | 242 | 1.94e-37 | 133 |
| MsG0480018779.01.T01 | AT5G07220 | 34.583 | 240 | 115 | 2 | 14 | 214 | 67 | 303 | 4.01e-35 | 126 |
| MsG0480018779.01.T01 | AT5G62100 | 34.466 | 206 | 130 | 2 | 11 | 214 | 58 | 260 | 2.56e-30 | 113 |
| MsG0480018779.01.T01 | AT5G62100 | 33.180 | 217 | 129 | 4 | 11 | 214 | 58 | 271 | 1.91e-27 | 106 |
| MsG0480018779.01.T01 | AT5G62100 | 37.410 | 139 | 87 | 0 | 11 | 149 | 58 | 196 | 3.31e-24 | 95.5 |
| MsG0480018779.01.T01 | AT5G62100 | 36.691 | 139 | 88 | 0 | 11 | 149 | 58 | 196 | 2.49e-23 | 93.6 |
| MsG0480018779.01.T01 | AT5G14360 | 47.368 | 76 | 37 | 1 | 11 | 86 | 89 | 161 | 1.14e-11 | 61.2 |
Find 57 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTGCCACTTTGGCTAAA+AGG | 0.236418 | 4:-9674927 | None:intergenic |
| ACTTACCCTTTACCCCTTCC+TGG | 0.249699 | 4:-9672953 | None:intergenic |
| AAGAAAAGTCTTTGTTGTTC+AGG | 0.267677 | 4:-9672894 | None:intergenic |
| TGGCCTTCATCCTTTGTCTA+AGG | 0.298701 | 4:+9675116 | MsG0480018779.01.T01:three_prime_UTR |
| GTCGTTCGAGCCTTCAATTC+CGG | 0.305581 | 4:-9674985 | None:intergenic |
| AAAGCTACTGAAGCTATTAA+TGG | 0.320180 | 4:+9673053 | MsG0480018779.01.T01:CDS |
| TCTACAGGTGCGTCGTGTGC+AGG | 0.324862 | 4:+9674860 | MsG0480018779.01.T01:intron |
| TATATGTGCTTGTCATGTTT+TGG | 0.332807 | 4:+9672817 | MsG0480018779.01.T01:CDS |
| GTAGAAGATGATGTTGTTGA+TGG | 0.343484 | 4:-9675011 | None:intergenic |
| ACAAAGGATGAAGGCCAATA+TGG | 0.352783 | 4:-9675110 | None:intergenic |
| AAATTGCTTGTACCTAAAAC+TGG | 0.353822 | 4:+9672864 | MsG0480018779.01.T01:CDS |
| CTGCAACTTTGCTTCACCTT+CGG | 0.356594 | 4:-9673314 | None:intergenic |
| AAGCTACTGAAGCTATTAAT+GGG | 0.357416 | 4:+9673054 | MsG0480018779.01.T01:CDS |
| CAATTGGTTGTTCCTGTGGC+AGG | 0.364539 | 4:-9674948 | None:intergenic |
| TGTGCAGGGCCTCGTGGATA+TGG | 0.372183 | 4:+9674875 | MsG0480018779.01.T01:CDS |
| ATAATTGTACAATGCCATAT+TGG | 0.373086 | 4:+9675096 | MsG0480018779.01.T01:three_prime_UTR |
| CTGCCACAGGAACAACCAAT+TGG | 0.408679 | 4:+9674949 | MsG0480018779.01.T01:CDS |
| ACCTTTGATACCGGAATTGA+AGG | 0.408962 | 4:+9674975 | MsG0480018779.01.T01:CDS |
| AGTCAATTGCTGAAACTAGA+TGG | 0.412180 | 4:+9673283 | MsG0480018779.01.T01:CDS |
| AGGAATAGAAAAGGATGATA+AGG | 0.413216 | 4:+9672920 | MsG0480018779.01.T01:CDS |
| CTGTGGCAGGATTGCCACTT+TGG | 0.420220 | 4:-9674935 | None:intergenic |
| AGGTGGACAAGCTCTCTGAT+AGG | 0.425497 | 4:+9673087 | MsG0480018779.01.T01:CDS |
| GGTATCAAAGGTTTCCCAAT+TGG | 0.433564 | 4:-9674964 | None:intergenic |
| ATTGCACCAGGAAGGGGTAA+AGG | 0.462161 | 4:+9672947 | MsG0480018779.01.T01:CDS |
| CTACAGGTGCGTCGTGTGCA+GGG | 0.463922 | 4:+9674861 | MsG0480018779.01.T01:intron |
| GATTGCCACTTTGGCTAAAA+GGG | 0.477871 | 4:-9674926 | None:intergenic |
| GCCACTTTGGCTAAAAGGGT+TGG | 0.481688 | 4:-9674922 | None:intergenic |
| TTGGAAGCGGCTATCAATGC+AGG | 0.494388 | 4:+9673211 | MsG0480018779.01.T01:CDS |
| TTCCCAATTGGTTGTTCCTG+TGG | 0.495913 | 4:-9674952 | None:intergenic |
| TTAGGTGGCTGCCTTGGAAG+CGG | 0.498869 | 4:+9673198 | MsG0480018779.01.T01:intron |
| CAACCTTAGACAAAGGATGA+AGG | 0.502140 | 4:-9675119 | None:intergenic |
| GCCTTCAATTCCGGTATCAA+AGG | 0.504976 | 4:-9674976 | None:intergenic |
| TTTCTTCAGAGGAATAGAAA+AGG | 0.505826 | 4:+9672911 | MsG0480018779.01.T01:CDS |
| AATATGGAATTATAAATAGC+TGG | 0.506468 | 4:-9675212 | None:intergenic |
| TTGCACCAGGAAGGGGTAAA+GGG | 0.507688 | 4:+9672948 | MsG0480018779.01.T01:CDS |
| TGCCACAGGAACAACCAATT+GGG | 0.510930 | 4:+9674950 | MsG0480018779.01.T01:CDS |
| AATTGGGAAACCTTTGATAC+CGG | 0.513864 | 4:+9674966 | MsG0480018779.01.T01:CDS |
| GGTGGACAAGCTCTCTGATA+GGG | 0.515648 | 4:+9673088 | MsG0480018779.01.T01:CDS |
| GGAGCAATTGCACCAGGAAG+GGG | 0.531521 | 4:+9672941 | MsG0480018779.01.T01:CDS |
| TGCATTGATAGCCGCTTCCA+AGG | 0.543348 | 4:-9673209 | None:intergenic |
| AGGAGCAATTGCACCAGGAA+GGG | 0.549162 | 4:+9672940 | MsG0480018779.01.T01:CDS |
| AAGGAGCAATTGCACCAGGA+AGG | 0.551826 | 4:+9672939 | MsG0480018779.01.T01:CDS |
| AAATATCTCATGATTGGGAG+CGG | 0.555712 | 4:+9675036 | MsG0480018779.01.T01:CDS |
| TGATAAGGAGCAATTGCACC+AGG | 0.587143 | 4:+9672935 | MsG0480018779.01.T01:CDS |
| CAAAGTGGCAATCCTGCCAC+AGG | 0.588975 | 4:+9674936 | MsG0480018779.01.T01:CDS |
| GGATATGGTAGATTCTCTAA+AGG | 0.599325 | 4:+9674890 | MsG0480018779.01.T01:CDS |
| GCTGAAACTAGATGGAATTG+AGG | 0.614919 | 4:+9673291 | MsG0480018779.01.T01:CDS |
| GCGTCGTGTGCAGGGCCTCG+TGG | 0.614921 | 4:+9674869 | MsG0480018779.01.T01:CDS |
| ATCAGAGAGCTTGTCCACCT+CGG | 0.617214 | 4:-9673084 | None:intergenic |
| TAGCAAAGAGAAGAAACTTG+AGG | 0.627965 | 4:+9673004 | MsG0480018779.01.T01:CDS |
| TAATGGGGTTAGAGCCGAGG+TGG | 0.641529 | 4:+9673070 | MsG0480018779.01.T01:CDS |
| AAAGTTGCAGAGAAAAGCTG+AGG | 0.646187 | 4:+9673327 | MsG0480018779.01.T01:CDS |
| CTAGATGGAATTGAGGCCGA+AGG | 0.650728 | 4:+9673298 | MsG0480018779.01.T01:CDS |
| AGCTACTGAAGCTATTAATG+GGG | 0.652533 | 4:+9673055 | MsG0480018779.01.T01:CDS |
| TATTAATGGGGTTAGAGCCG+AGG | 0.654047 | 4:+9673067 | MsG0480018779.01.T01:CDS |
| TGGAAGCGGCTATCAATGCA+GGG | 0.656177 | 4:+9673212 | MsG0480018779.01.T01:CDS |
| GAGAATCTACCATATCCACG+AGG | 0.824806 | 4:-9674884 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATATTATTAATTA+AGG | + | Chr4:9673891-9673910 | MsG0480018779.01.T01:intron | 0.0% |
| !! | CAAATTTATATATAAAGTTG+TGG | + | Chr4:9674777-9674796 | MsG0480018779.01.T01:intron | 15.0% |
| !!! | ATTTTATCATACATTTACAA+TGG | + | Chr4:9674615-9674634 | MsG0480018779.01.T01:intron | 15.0% |
| !!! | ATTTTGACTGTAAAAAAAAA+AGG | + | Chr4:9674101-9674120 | MsG0480018779.01.T01:intron | 15.0% |
| !!! | GATTATTATAATTTTTTAGG+TGG | + | Chr4:9673183-9673202 | MsG0480018779.01.T01:intron | 15.0% |
| !! | AATATGGAATTATAAATAGC+TGG | - | Chr4:9675215-9675234 | None:intergenic | 20.0% |
| !! | ATGAAAAATATCTTCTACAT+TGG | + | Chr4:9673724-9673743 | MsG0480018779.01.T01:intron | 20.0% |
| !! | GATTTCAAATGAATTTGATT+TGG | - | Chr4:9674376-9674395 | None:intergenic | 20.0% |
| !! | TAAGAAGATTATTAAGGATT+CGG | - | Chr4:9673489-9673508 | None:intergenic | 20.0% |
| !! | TACAAAAATATCTCATGATT+GGG | + | Chr4:9675031-9675050 | MsG0480018779.01.T01:CDS | 20.0% |
| !!! | AATTCATTTGAAATCACATT+TGG | + | Chr4:9674381-9674400 | MsG0480018779.01.T01:intron | 20.0% |
| !!! | AGAAAAAGAGTTTTGAATAA+TGG | - | Chr4:9674648-9674667 | None:intergenic | 20.0% |
| ! | AATGATCCATTAAGGAAATA+AGG | - | Chr4:9674432-9674451 | None:intergenic | 25.0% |
| ! | ATAATTGTACAATGCCATAT+TGG | + | Chr4:9675096-9675115 | MsG0480018779.01.T01:three_prime_UTR | 25.0% |
| ! | ATGATCCATTAAGGAAATAA+GGG | - | Chr4:9674431-9674450 | None:intergenic | 25.0% |
| ! | CTACAAAAATATCTCATGAT+TGG | + | Chr4:9675030-9675049 | MsG0480018779.01.T01:CDS | 25.0% |
| ! | CTGTTAAAAAAATAGTGCAT+TGG | + | Chr4:9674705-9674724 | MsG0480018779.01.T01:intron | 25.0% |
| ! | GAGTGATAAGAAGATTATTA+AGG | - | Chr4:9673495-9673514 | None:intergenic | 25.0% |
| ! | GCTATTGAAATTGCTAATTT+GGG | + | Chr4:9673360-9673379 | MsG0480018779.01.T01:intron | 25.0% |
| ! | TCTGATCTAAGTCATAAAAA+AGG | - | Chr4:9673611-9673630 | None:intergenic | 25.0% |
| ! | TGCTATTGAAATTGCTAATT+TGG | + | Chr4:9673359-9673378 | MsG0480018779.01.T01:intron | 25.0% |
| !! | AAGTAAAGTGATCTATGTTT+TGG | - | Chr4:9674338-9674357 | None:intergenic | 25.0% |
| !! | ATCATATACTGTCTTTTACT+TGG | + | Chr4:9674521-9674540 | MsG0480018779.01.T01:intron | 25.0% |
| !! | GATTTTGAACATTGAGAATA+TGG | - | Chr4:9675231-9675250 | None:intergenic | 25.0% |
| !! | TAAGTCAAAGATTTTGCTTA+TGG | + | Chr4:9672971-9672990 | MsG0480018779.01.T01:CDS | 25.0% |
| !! | TGTTCTGTGTTGAATTTTAA+CGG | - | Chr4:9675188-9675207 | None:intergenic | 25.0% |
| !!! | ATGTTTTGGTTTTCAATAAC+AGG | + | Chr4:9672831-9672850 | MsG0480018779.01.T01:CDS | 25.0% |
| !!! | TTGCATTTTTTTATTAGCCA+TGG | + | Chr4:9673424-9673443 | MsG0480018779.01.T01:intron | 25.0% |
| !!! | TTTTTTTCAACCTTAGACAA+AGG | - | Chr4:9675129-9675148 | None:intergenic | 25.0% |
| AAAGCTACTGAAGCTATTAA+TGG | + | Chr4:9673053-9673072 | MsG0480018779.01.T01:CDS | 30.0% | |
| AAATTGCTTGTACCTAAAAC+TGG | + | Chr4:9672864-9672883 | MsG0480018779.01.T01:CDS | 30.0% | |
| AAGCTACTGAAGCTATTAAT+GGG | + | Chr4:9673054-9673073 | MsG0480018779.01.T01:CDS | 30.0% | |
| AATGGATCATTGCTAACTAA+TGG | + | Chr4:9674441-9674460 | MsG0480018779.01.T01:intron | 30.0% | |
| ACAGTCAAAATGAAGAAGAA+AGG | - | Chr4:9674092-9674111 | None:intergenic | 30.0% | |
| AGGAATAGAAAAGGATGATA+AGG | + | Chr4:9672920-9672939 | MsG0480018779.01.T01:CDS | 30.0% | |
| ATACACTAACATGGATATGA+GGG | - | Chr4:9673546-9673565 | None:intergenic | 30.0% | |
| CAGTCAAAATGAAGAAGAAA+GGG | - | Chr4:9674091-9674110 | None:intergenic | 30.0% | |
| CATGGTATAAACATATCAAC+TGG | + | Chr4:9673147-9673166 | MsG0480018779.01.T01:intron | 30.0% | |
| GCAATATTTAAATCTCCACA+TGG | - | Chr4:9674816-9674835 | None:intergenic | 30.0% | |
| TAGTTAGCAATGATCCATTA+AGG | - | Chr4:9674440-9674459 | None:intergenic | 30.0% | |
| TGAGTTGTTAGTAGTATGAT+GGG | + | Chr4:9673455-9673474 | MsG0480018779.01.T01:intron | 30.0% | |
| TGATATGTTTATACCATGAG+TGG | - | Chr4:9673145-9673164 | None:intergenic | 30.0% | |
| TGTCTACAGTATTTGTACAA+TGG | - | Chr4:9674595-9674614 | None:intergenic | 30.0% | |
| TTTCTTCAGAGGAATAGAAA+AGG | + | Chr4:9672911-9672930 | MsG0480018779.01.T01:CDS | 30.0% | |
| TTTGTACATGTTGTCAATAG+CGG | - | Chr4:9674305-9674324 | None:intergenic | 30.0% | |
| ! | TAATGCCCTTATTTCCTTAA+TGG | + | Chr4:9674423-9674442 | MsG0480018779.01.T01:intron | 30.0% |
| ! | TATATGTGCTTGTCATGTTT+TGG | + | Chr4:9672817-9672836 | MsG0480018779.01.T01:CDS | 30.0% |
| !! | AAGAAAAGTCTTTGTTGTTC+AGG | - | Chr4:9672897-9672916 | None:intergenic | 30.0% |
| !! | TGATCTATGTTTTGGACTTT+AGG | - | Chr4:9674330-9674349 | None:intergenic | 30.0% |
| AAATATCTCATGATTGGGAG+CGG | + | Chr4:9675036-9675055 | MsG0480018779.01.T01:CDS | 35.0% | |
| AATTGGGAAACCTTTGATAC+CGG | + | Chr4:9674966-9674985 | MsG0480018779.01.T01:CDS | 35.0% | |
| ACATGGATATGAGGGATATA+AGG | - | Chr4:9673538-9673557 | None:intergenic | 35.0% | |
| ACTACTAACAACTCAGCTAT+TGG | - | Chr4:9673450-9673469 | None:intergenic | 35.0% | |
| AGATCAGACATACACTAACA+TGG | - | Chr4:9673555-9673574 | None:intergenic | 35.0% | |
| AGCTACTGAAGCTATTAATG+GGG | + | Chr4:9673055-9673074 | MsG0480018779.01.T01:CDS | 35.0% | |
| AGTCAATTGCTGAAACTAGA+TGG | + | Chr4:9673283-9673302 | MsG0480018779.01.T01:CDS | 35.0% | |
| ATATATGACTACTCCACTCA+TGG | + | Chr4:9673129-9673148 | MsG0480018779.01.T01:intron | 35.0% | |
| CATACACTAACATGGATATG+AGG | - | Chr4:9673547-9673566 | None:intergenic | 35.0% | |
| CTGAGTTGTTAGTAGTATGA+TGG | + | Chr4:9673454-9673473 | MsG0480018779.01.T01:intron | 35.0% | |
| GAGTTGTTAGTAGTATGATG+GGG | + | Chr4:9673456-9673475 | MsG0480018779.01.T01:intron | 35.0% | |
| GGATATGGTAGATTCTCTAA+AGG | + | Chr4:9674890-9674909 | MsG0480018779.01.T01:CDS | 35.0% | |
| GTAGAAGATGATGTTGTTGA+TGG | - | Chr4:9675014-9675033 | None:intergenic | 35.0% | |
| GTCAAAAAGAGATGTATCCA+TGG | + | Chr4:9674558-9674577 | MsG0480018779.01.T01:intron | 35.0% | |
| TAGCAAAGAGAAGAAACTTG+AGG | + | Chr4:9673004-9673023 | MsG0480018779.01.T01:CDS | 35.0% | |
| TTAAGCAGTATGTGAACAGA+TGG | - | Chr4:9674746-9674765 | None:intergenic | 35.0% | |
| TTTGCAGTACATTGTCAAAG+CGG | + | Chr4:9673776-9673795 | MsG0480018779.01.T01:intron | 35.0% | |
| ! | AGAACAGAGATGAGATTTTG+TGG | + | Chr4:9674135-9674154 | MsG0480018779.01.T01:intron | 35.0% |
| ! | CAACAAAGACTTTTCTTCAG+AGG | + | Chr4:9672900-9672919 | MsG0480018779.01.T01:CDS | 35.0% |
| ! | TGGATACATCTCTTTTTGAC+AGG | - | Chr4:9674558-9674577 | None:intergenic | 35.0% |
| ! | TTAGTAGTATGATGGGGATA+GGG | + | Chr4:9673462-9673481 | MsG0480018779.01.T01:intron | 35.0% |
| AAAGAGATGTATCCATGGAG+AGG | + | Chr4:9674563-9674582 | MsG0480018779.01.T01:intron | 40.0% | |
| AAAGTTGCAGAGAAAAGCTG+AGG | + | Chr4:9673327-9673346 | MsG0480018779.01.T01:CDS | 40.0% | |
| ACAAAGGATGAAGGCCAATA+TGG | - | Chr4:9675113-9675132 | None:intergenic | 40.0% | |
| ACCTTTGATACCGGAATTGA+AGG | + | Chr4:9674975-9674994 | MsG0480018779.01.T01:CDS | 40.0% | |
| CAACCTTAGACAAAGGATGA+AGG | - | Chr4:9675122-9675141 | None:intergenic | 40.0% | |
| CAAGAACAACATTGCGACAT+TGG | - | Chr4:9673582-9673601 | None:intergenic | 40.0% | |
| CTAACCAAGTCGAGATTTGA+TGG | - | Chr4:9673699-9673718 | None:intergenic | 40.0% | |
| GCTGAAACTAGATGGAATTG+AGG | + | Chr4:9673291-9673310 | MsG0480018779.01.T01:CDS | 40.0% | |
| GGTATCAAAGGTTTCCCAAT+TGG | - | Chr4:9674967-9674986 | None:intergenic | 40.0% | |
| TGAAGACGATCTAGAGATCT+AGG | - | Chr4:9674013-9674032 | None:intergenic | 40.0% | |
| TTTGCCATCAAATCTCGACT+TGG | + | Chr4:9673692-9673711 | MsG0480018779.01.T01:intron | 40.0% | |
| ! | AGGGCATTAAGTGTACGTTT+GGG | - | Chr4:9674412-9674431 | None:intergenic | 40.0% |
| ! | CAGCTTTTCATTCCTTCTAC+AGG | + | Chr4:9674845-9674864 | MsG0480018779.01.T01:intron | 40.0% |
| ! | GTTAGTAGTATGATGGGGAT+AGG | + | Chr4:9673461-9673480 | MsG0480018779.01.T01:intron | 40.0% |
| !! | AAGGGCATTAAGTGTACGTT+TGG | - | Chr4:9674413-9674432 | None:intergenic | 40.0% |
| !! | GATTGCCACTTTGGCTAAAA+GGG | - | Chr4:9674929-9674948 | None:intergenic | 40.0% |
| !!! | AATTTTTTAGGTGGCTGCCT+TGG | + | Chr4:9673192-9673211 | MsG0480018779.01.T01:intron | 40.0% |
| !!! | TCAGGCTCTAAACCAGTTTT+AGG | - | Chr4:9672879-9672898 | None:intergenic | 40.0% |
| AACAACTCAGCTATTGGCCA+TGG | - | Chr4:9673444-9673463 | None:intergenic | 45.0% | |
| ACATTGTCAAAGCGGAAACG+CGG | + | Chr4:9673784-9673803 | MsG0480018779.01.T01:intron | 45.0% | |
| AGATGTATCCATGGAGAGGT+TGG | + | Chr4:9674567-9674586 | MsG0480018779.01.T01:intron | 45.0% | |
| CTGCAACTTTGCTTCACCTT+CGG | - | Chr4:9673317-9673336 | None:intergenic | 45.0% | |
| GAGAATCTACCATATCCACG+AGG | - | Chr4:9674887-9674906 | None:intergenic | 45.0% | |
| GCCTTCAATTCCGGTATCAA+AGG | - | Chr4:9674979-9674998 | None:intergenic | 45.0% | |
| TATTAATGGGGTTAGAGCCG+AGG | + | Chr4:9673067-9673086 | MsG0480018779.01.T01:CDS | 45.0% | |
| TGATAAGGAGCAATTGCACC+AGG | + | Chr4:9672935-9672954 | MsG0480018779.01.T01:CDS | 45.0% | |
| TGCCACAGGAACAACCAATT+GGG | + | Chr4:9674950-9674969 | MsG0480018779.01.T01:CDS | 45.0% | |
| TGGCCTTCATCCTTTGTCTA+AGG | + | Chr4:9675116-9675135 | MsG0480018779.01.T01:three_prime_UTR | 45.0% | |
| TTCCCAATTGGTTGTTCCTG+TGG | - | Chr4:9674955-9674974 | None:intergenic | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | - | Chr4:9674295-9674314 | None:intergenic | 45.0% | |
| ! | TCCAACCCTTTTAGCCAAAG+TGG | + | Chr4:9674921-9674940 | MsG0480018779.01.T01:CDS | 45.0% |
| ! | TGAGGGATATAAGGTTAGCC+TGG | - | Chr4:9673529-9673548 | None:intergenic | 45.0% |
| !! | GGATTGCCACTTTGGCTAAA+AGG | - | Chr4:9674930-9674949 | None:intergenic | 45.0% |
| !! | TATAAGGTTAGCCTGGCAGT+TGG | - | Chr4:9673522-9673541 | None:intergenic | 45.0% |
| !!! | TATGATTATTATAATTTTTT+AGG | + | Chr4:9673180-9673199 | MsG0480018779.01.T01:intron | 5.0% |
| AAGGAGCAATTGCACCAGGA+AGG | + | Chr4:9672939-9672958 | MsG0480018779.01.T01:CDS | 50.0% | |
| ACTTACCCTTTACCCCTTCC+TGG | - | Chr4:9672956-9672975 | None:intergenic | 50.0% | |
| AGGAGCAATTGCACCAGGAA+GGG | + | Chr4:9672940-9672959 | MsG0480018779.01.T01:CDS | 50.0% | |
| AGGTGGACAAGCTCTCTGAT+AGG | + | Chr4:9673087-9673106 | MsG0480018779.01.T01:CDS | 50.0% | |
| ATCACTCTACTCCAACTGCC+AGG | + | Chr4:9673508-9673527 | MsG0480018779.01.T01:intron | 50.0% | |
| ATCAGAGAGCTTGTCCACCT+CGG | - | Chr4:9673087-9673106 | None:intergenic | 50.0% | |
| ATTGCACCAGGAAGGGGTAA+AGG | + | Chr4:9672947-9672966 | MsG0480018779.01.T01:CDS | 50.0% | |
| CAATGGATCCAACCTCTCCA+TGG | - | Chr4:9674578-9674597 | None:intergenic | 50.0% | |
| CAATTGGTTGTTCCTGTGGC+AGG | - | Chr4:9674951-9674970 | None:intergenic | 50.0% | |
| CTAGATGGAATTGAGGCCGA+AGG | + | Chr4:9673298-9673317 | MsG0480018779.01.T01:CDS | 50.0% | |
| CTGCCACAGGAACAACCAAT+TGG | + | Chr4:9674949-9674968 | MsG0480018779.01.T01:CDS | 50.0% | |
| GAACAATAGCAGGTCAACGC+GGG | - | Chr4:9674196-9674215 | None:intergenic | 50.0% | |
| GGAACAATAGCAGGTCAACG+CGG | - | Chr4:9674197-9674216 | None:intergenic | 50.0% | |
| GGCAAATGCGGAACAATAGC+AGG | - | Chr4:9674206-9674225 | None:intergenic | 50.0% | |
| GGCTAAGATGTGATGCCATG+TGG | + | Chr4:9674798-9674817 | MsG0480018779.01.T01:intron | 50.0% | |
| GGTGGACAAGCTCTCTGATA+GGG | + | Chr4:9673088-9673107 | MsG0480018779.01.T01:CDS | 50.0% | |
| GTCGTTCGAGCCTTCAATTC+CGG | - | Chr4:9674988-9675007 | None:intergenic | 50.0% | |
| TGGAAGCGGCTATCAATGCA+GGG | + | Chr4:9673212-9673231 | MsG0480018779.01.T01:CDS | 50.0% | |
| TTGCACCAGGAAGGGGTAAA+GGG | + | Chr4:9672948-9672967 | MsG0480018779.01.T01:CDS | 50.0% | |
| TTGGAAGCGGCTATCAATGC+AGG | + | Chr4:9673211-9673230 | MsG0480018779.01.T01:CDS | 50.0% | |
| ! | GCCACTTTGGCTAAAAGGGT+TGG | - | Chr4:9674925-9674944 | None:intergenic | 50.0% |
| ! | TGCATTGATAGCCGCTTCCA+AGG | - | Chr4:9673212-9673231 | None:intergenic | 50.0% |
| AGGTCAACGCGGGCAAAAAG+CGG | - | Chr4:9674186-9674205 | None:intergenic | 55.0% | |
| AGTCGCGCGTTAGGCAAATG+CGG | - | Chr4:9674218-9674237 | None:intergenic | 55.0% | |
| CAAAGTGGCAATCCTGCCAC+AGG | + | Chr4:9674936-9674955 | MsG0480018779.01.T01:CDS | 55.0% | |
| CATTTGCCTAACGCGCGACT+CGG | + | Chr4:9674218-9674237 | MsG0480018779.01.T01:intron | 55.0% | |
| GGAGCAATTGCACCAGGAAG+GGG | + | Chr4:9672941-9672960 | MsG0480018779.01.T01:CDS | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | + | Chr4:9673815-9673834 | MsG0480018779.01.T01:intron | 55.0% | |
| TAATGGGGTTAGAGCCGAGG+TGG | + | Chr4:9673070-9673089 | MsG0480018779.01.T01:CDS | 55.0% | |
| TTAGGTGGCTGCCTTGGAAG+CGG | + | Chr4:9673198-9673217 | MsG0480018779.01.T01:intron | 55.0% | |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | - | Chr4:9673824-9673843 | None:intergenic | 55.0% |
| ! | CTGTGGCAGGATTGCCACTT+TGG | - | Chr4:9674938-9674957 | None:intergenic | 55.0% |
| ! | TACCGCGCCGCGTCAATTTT+TGG | - | Chr4:9673825-9673844 | None:intergenic | 55.0% |
| AATTGACGCGGCGCGGTAAG+CGG | + | Chr4:9673827-9673846 | MsG0480018779.01.T01:intron | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | + | Chr4:9673820-9673839 | MsG0480018779.01.T01:intron | 60.0% | |
| CTACAGGTGCGTCGTGTGCA+GGG | + | Chr4:9674861-9674880 | MsG0480018779.01.T01:intron | 60.0% | |
| GCACACGACGCACCTGTAGA+AGG | - | Chr4:9674860-9674879 | None:intergenic | 60.0% | |
| GCGGGCGCTATTACATGACG+CGG | + | Chr4:9673857-9673876 | MsG0480018779.01.T01:intron | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | - | Chr4:9674185-9674204 | None:intergenic | 60.0% | |
| TCTACAGGTGCGTCGTGTGC+AGG | + | Chr4:9674860-9674879 | MsG0480018779.01.T01:intron | 60.0% | |
| TGTGCAGGGCCTCGTGGATA+TGG | + | Chr4:9674875-9674894 | MsG0480018779.01.T01:CDS | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | - | Chr4:9673823-9673842 | None:intergenic | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | - | Chr4:9673820-9673839 | None:intergenic | 60.0% |
| ATTGACGCGGCGCGGTAAGC+GGG | + | Chr4:9673828-9673847 | MsG0480018779.01.T01:intron | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | + | Chr4:9673789-9673808 | MsG0480018779.01.T01:intron | 65.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | - | Chr4:9674227-9674246 | None:intergenic | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | + | Chr4:9674238-9674257 | MsG0480018779.01.T01:intron | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | - | Chr4:9674284-9674303 | None:intergenic | 70.0% | |
| GCGTCGTGTGCAGGGCCTCG+TGG | + | Chr4:9674869-9674888 | MsG0480018779.01.T01:CDS | 75.0% | |
| ! | AACGCGGCGCGATCGCGGCG+CGG | - | Chr4:9674279-9674298 | None:intergenic | 80.0% |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | + | Chr4:9673794-9673813 | MsG0480018779.01.T01:intron | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | + | Chr4:9673838-9673857 | MsG0480018779.01.T01:intron | 80.0% |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | + | Chr4:9673839-9673858 | MsG0480018779.01.T01:intron | 80.0% |
| ! | GGCGCGATCGCGGCGCGGAG+CGG | - | Chr4:9674274-9674293 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 9672813 | 9675256 | 9672813 | ID=MsG0480018779.01;Name=MsG0480018779.01 |
| Chr4 | mRNA | 9672813 | 9675256 | 9672813 | ID=MsG0480018779.01.T01;Parent=MsG0480018779.01;Name=MsG0480018779.01.T01;_AED=0.46;_eAED=0.46;_QI=0|1|0.66|1|1|1|3|189|214 |
| Chr4 | exon | 9672813 | 9673109 | 9672813 | ID=MsG0480018779.01.T01:exon:2737;Parent=MsG0480018779.01.T01 |
| Chr4 | exon | 9673202 | 9673348 | 9673202 | ID=MsG0480018779.01.T01:exon:2738;Parent=MsG0480018779.01.T01 |
| Chr4 | exon | 9674867 | 9675256 | 9674867 | ID=MsG0480018779.01.T01:exon:2739;Parent=MsG0480018779.01.T01 |
| Chr4 | CDS | 9672813 | 9673109 | 9672813 | ID=MsG0480018779.01.T01:cds;Parent=MsG0480018779.01.T01 |
| Chr4 | CDS | 9673202 | 9673348 | 9673202 | ID=MsG0480018779.01.T01:cds;Parent=MsG0480018779.01.T01 |
| Chr4 | CDS | 9674867 | 9675067 | 9674867 | ID=MsG0480018779.01.T01:cds;Parent=MsG0480018779.01.T01 |
| Chr4 | three_prime_UTR | 9675068 | 9675256 | 9675068 | ID=MsG0480018779.01.T01:three_prime_utr;Parent=MsG0480018779.01.T01 |
| Gene Sequence |
| Protein sequence |
