Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014876.01.T01 | AFK47174.1 | 90.588 | 85 | 7 | 1 | 8 | 92 | 289 | 372 | 4.23E-47 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014876.01.T01 | P0C895 | 64.773 | 88 | 29 | 1 | 7 | 92 | 286 | 373 | 1.00E-32 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014876.01.T01 | I3T3T2 | 90.588 | 85 | 7 | 1 | 8 | 92 | 289 | 372 | 2.02e-47 | 164 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048404.01 | MsG0380014876.01 | 0.833482 | 5.200302e-56 | 5.996520e-53 |
| MsG0080048463.01 | MsG0380014876.01 | 0.800788 | 1.222599e-48 | 5.743374e-46 |
| MsG0080048618.01 | MsG0380014876.01 | 0.824182 | 9.272957e-54 | 8.153724e-51 |
| MsG0080048784.01 | MsG0380014876.01 | 0.821670 | 3.569016e-53 | 2.922596e-50 |
| MsG0180000139.01 | MsG0380014876.01 | 0.831252 | 1.854235e-55 | 2.000940e-52 |
| MsG0180000145.01 | MsG0380014876.01 | 0.804811 | 1.805749e-49 | 9.401261e-47 |
| MsG0180000335.01 | MsG0380014876.01 | 0.817124 | 3.880443e-52 | 2.801663e-49 |
| MsG0180000470.01 | MsG0380014876.01 | 0.802736 | 4.869182e-49 | 2.403430e-46 |
| MsG0180000777.01 | MsG0380014876.01 | 0.811935 | 5.458938e-51 | 3.423696e-48 |
| MsG0180000835.01 | MsG0380014876.01 | 0.841031 | 6.079388e-58 | 8.819656e-55 |
| MsG0180000914.01 | MsG0380014876.01 | 0.818584 | 1.816283e-52 | 1.364994e-49 |
| MsG0180002377.01 | MsG0380014876.01 | 0.840444 | 8.662821e-58 | 1.234203e-54 |
| MsG0180002547.01 | MsG0380014876.01 | 0.850401 | 1.739570e-60 | 3.403403e-57 |
| MsG0180002664.01 | MsG0380014876.01 | 0.821877 | 3.196765e-53 | 2.633290e-50 |
| MsG0180002794.01 | MsG0380014876.01 | 0.834503 | 2.885890e-56 | 3.431683e-53 |
| MsG0180002895.01 | MsG0380014876.01 | 0.808380 | 3.187253e-50 | 1.819681e-47 |
| MsG0180003651.01 | MsG0380014876.01 | 0.813755 | 2.179760e-51 | 1.435754e-48 |
| MsG0180003885.01 | MsG0380014876.01 | 0.806426 | 8.272016e-50 | 4.488508e-47 |
| MsG0180003951.01 | MsG0380014876.01 | 0.803782 | 2.957148e-49 | 1.499253e-46 |
| MsG0180004389.01 | MsG0380014876.01 | 0.845411 | 4.130781e-59 | 6.878050e-56 |
| MsG0180004481.01 | MsG0380014876.01 | 0.837513 | 4.971887e-57 | 6.473904e-54 |
| MsG0180004482.01 | MsG0380014876.01 | 0.838662 | 2.516632e-57 | 3.394049e-54 |
| MsG0180004509.01 | MsG0380014876.01 | 0.800070 | 1.712089e-48 | 7.898002e-46 |
| MsG0180004765.01 | MsG0380014876.01 | 0.829785 | 4.239407e-55 | 4.383676e-52 |
| MsG0180004928.01 | MsG0380014876.01 | 0.814131 | 1.801146e-51 | 1.198536e-48 |
| MsG0180005153.01 | MsG0380014876.01 | 0.822833 | 1.916720e-53 | 1.622513e-50 |
| MsG0180005169.01 | MsG0380014876.01 | 0.828381 | 9.280556e-55 | 9.209442e-52 |
| MsG0180005250.01 | MsG0380014876.01 | 0.807069 | 6.050284e-50 | 3.337729e-47 |
| MsG0180005445.01 | MsG0380014876.01 | 0.800062 | 1.719105e-48 | 7.928586e-46 |
| MsG0180005575.01 | MsG0380014876.01 | 0.812876 | 3.399905e-51 | 2.186705e-48 |
| MsG0180006017.01 | MsG0380014876.01 | 0.817411 | 3.344708e-52 | 2.434066e-49 |
| MsG0180006224.01 | MsG0380014876.01 | 0.821822 | 3.291634e-53 | 2.707215e-50 |
| MsG0180006261.01 | MsG0380014876.01 | 0.810958 | 8.895527e-51 | 5.437675e-48 |
| MsG0280006299.01 | MsG0380014876.01 | 0.816423 | 5.572407e-52 | 3.946770e-49 |
| MsG0280006405.01 | MsG0380014876.01 | 0.824029 | 1.007030e-53 | 8.816260e-51 |
| MsG0280010722.01 | MsG0380014876.01 | 0.808619 | 2.833867e-50 | 1.627888e-47 |
| MsG0280010776.01 | MsG0380014876.01 | 0.813745 | 2.190466e-51 | 1.442392e-48 |
| MsG0280010778.01 | MsG0380014876.01 | 0.819739 | 9.913639e-53 | 7.693453e-50 |
| MsG0280010980.01 | MsG0380014876.01 | 0.805018 | 1.634231e-49 | 8.553137e-47 |
| MsG0280011101.01 | MsG0380014876.01 | 0.847385 | 1.195658e-59 | 2.121564e-56 |
| MsG0280011109.01 | MsG0380014876.01 | 0.817062 | 4.006000e-52 | 2.887586e-49 |
| MsG0280011339.01 | MsG0380014876.01 | 0.869325 | 3.370102e-66 | 1.259594e-62 |
| MsG0280011388.01 | MsG0380014876.01 | 0.809259 | 2.066997e-50 | 1.207832e-47 |
| MsG0380011581.01 | MsG0380014876.01 | 0.828173 | 1.041301e-54 | 1.027089e-51 |
| MsG0380011609.01 | MsG0380014876.01 | 0.804830 | 1.789724e-49 | 9.322092e-47 |
| MsG0380013085.01 | MsG0380014876.01 | 0.845354 | 4.280177e-59 | 7.113738e-56 |
| MsG0380013183.01 | MsG0380014876.01 | 0.823947 | 1.052828e-53 | 9.197016e-51 |
| MsG0380013549.01 | MsG0380014876.01 | 0.805954 | 1.039989e-49 | 5.575725e-47 |
| MsG0380014537.01 | MsG0380014876.01 | 0.839628 | 1.414005e-57 | 1.964063e-54 |
| MsG0380014778.01 | MsG0380014876.01 | 0.801844 | 7.433778e-49 | 3.586833e-46 |
| MsG0380014875.01 | MsG0380014876.01 | 0.811728 | 6.055021e-51 | 3.776992e-48 |
| MsG0380014876.01 | MsG0380014948.01 | 0.815344 | 9.700061e-52 | 6.670566e-49 |
| MsG0380014876.01 | MsG0380015332.01 | 0.841041 | 6.044732e-58 | 8.772206e-55 |
| MsG0380014876.01 | MsG0380015435.01 | 0.841018 | 6.128237e-58 | 8.886977e-55 |
| MsG0380014876.01 | MsG0380015555.01 | 0.845898 | 3.046309e-59 | 5.153243e-56 |
| MsG0380014876.01 | MsG0380015566.01 | 0.808598 | 2.863003e-50 | 1.643820e-47 |
| MsG0380014876.01 | MsG0380015631.01 | 0.807285 | 5.446735e-50 | 3.021779e-47 |
| MsG0380014876.01 | MsG0380016126.01 | 0.825567 | 4.369676e-54 | 3.997429e-51 |
| MsG0380014876.01 | MsG0380016133.01 | 0.810045 | 1.400980e-50 | 8.358762e-48 |
| MsG0380014876.01 | MsG0380016290.01 | 0.827692 | 1.359670e-54 | 1.322268e-51 |
| MsG0380014876.01 | MsG0380016407.01 | 0.823005 | 1.747655e-53 | 1.486588e-50 |
| MsG0380014876.01 | MsG0380016505.01 | 0.836827 | 7.448440e-57 | 9.496797e-54 |
| MsG0380014876.01 | MsG0380016529.01 | 0.847876 | 8.760479e-60 | 1.578997e-56 |
| MsG0380014876.01 | MsG0380016560.01 | 0.800024 | 1.749875e-48 | 8.062600e-46 |
| MsG0380014876.01 | MsG0380016671.01 | 0.830461 | 2.899270e-55 | 3.056317e-52 |
| MsG0380014876.01 | MsG0380016910.01 | 0.801467 | 8.880779e-49 | 4.244261e-46 |
| MsG0380014876.01 | MsG0380016970.01 | 0.825621 | 4.241508e-54 | 3.886314e-51 |
| MsG0380014876.01 | MsG0380017244.01 | 0.805801 | 1.120336e-49 | 5.982788e-47 |
| MsG0380014876.01 | MsG0380017258.01 | 0.833770 | 4.407006e-56 | 5.126115e-53 |
| MsG0380014876.01 | MsG0380017461.01 | 0.832047 | 1.181084e-55 | 1.305057e-52 |
| MsG0380014876.01 | MsG0380017498.01 | 0.815321 | 9.814578e-52 | 6.744971e-49 |
| MsG0380014876.01 | MsG0380017589.01 | 0.807850 | 4.132795e-50 | 2.326652e-47 |
| MsG0380014876.01 | MsG0380017947.01 | 0.825331 | 4.969760e-54 | 4.516226e-51 |
| MsG0380014876.01 | MsG0380018075.01 | 0.814695 | 1.351166e-51 | 9.129361e-49 |
| MsG0380014876.01 | MsG0480018124.01 | 0.806492 | 8.013416e-50 | 4.355409e-47 |
| MsG0380014876.01 | MsG0480018319.01 | 0.809265 | 2.060575e-50 | 1.204283e-47 |
| MsG0380014876.01 | MsG0480018465.01 | 0.821602 | 3.700699e-53 | 3.024449e-50 |
| MsG0380014876.01 | MsG0480018779.01 | 0.809253 | 2.073438e-50 | 1.211411e-47 |
| MsG0380014876.01 | MsG0480019206.01 | 0.820347 | 7.195645e-53 | 5.679251e-50 |
| MsG0380014876.01 | MsG0480019416.01 | 0.812131 | 4.947455e-51 | 3.119722e-48 |
| MsG0380014876.01 | MsG0480020739.01 | 0.827719 | 1.339433e-54 | 1.303709e-51 |
| MsG0380014876.01 | MsG0480020887.01 | 0.800885 | 1.168060e-48 | 5.501204e-46 |
| MsG0380014876.01 | MsG0480021056.01 | 0.816332 | 5.840330e-52 | 4.126605e-49 |
| MsG0380014876.01 | MsG0480021465.01 | 0.800868 | 1.177445e-48 | 5.542812e-46 |
| MsG0380014876.01 | MsG0480021750.01 | 0.827452 | 1.552118e-54 | 1.499133e-51 |
| MsG0380014876.01 | MsG0480022054.01 | 0.806306 | 8.771680e-50 | 4.745006e-47 |
| MsG0380014876.01 | MsG0480022711.01 | 0.833722 | 4.530762e-56 | 5.261980e-53 |
| MsG0380014876.01 | MsG0480023163.01 | 0.803350 | 3.635012e-49 | 1.822472e-46 |
| MsG0380014876.01 | MsG0480023221.01 | 0.869706 | 2.533064e-66 | 9.597370e-63 |
| MsG0380014876.01 | MsG0480023357.01 | 0.809135 | 2.197682e-50 | 1.279976e-47 |
| MsG0380014876.01 | MsG0480023463.01 | 0.839426 | 1.595654e-57 | 2.202899e-54 |
| MsG0380014876.01 | MsG0480023489.01 | 0.831374 | 1.731157e-55 | 1.875047e-52 |
| MsG0380014876.01 | MsG0480023600.01 | 0.806472 | 8.089241e-50 | 4.394562e-47 |
| MsG0380014876.01 | MsG0480023636.01 | 0.820859 | 5.490662e-53 | 4.395770e-50 |
| MsG0380014876.01 | MsG0580024197.01 | 0.837407 | 5.292437e-57 | 6.867735e-54 |
| MsG0380014876.01 | MsG0580025332.01 | 0.827570 | 1.454665e-54 | 1.409583e-51 |
| MsG0380014876.01 | MsG0580025439.01 | 0.816494 | 5.373449e-52 | 3.813132e-49 |
| MsG0380014876.01 | MsG0580025587.01 | 0.813007 | 3.182007e-51 | 2.053831e-48 |
| MsG0380014876.01 | MsG0580025661.01 | 0.814830 | 1.261309e-51 | 8.553213e-49 |
| MsG0380014876.01 | MsG0580025816.01 | 0.837064 | 6.477757e-57 | 8.318550e-54 |
| MsG0380014876.01 | MsG0580026086.01 | 0.815419 | 9.334260e-52 | 6.432154e-49 |
| MsG0380014876.01 | MsG0580026137.01 | 0.815145 | 1.073991e-51 | 7.344963e-49 |
| MsG0380014876.01 | MsG0580027361.01 | 0.862339 | 5.434387e-64 | 1.585899e-60 |
| MsG0380014876.01 | MsG0580027999.01 | 0.824412 | 8.185560e-54 | 7.244500e-51 |
| MsG0380014876.01 | MsG0580028582.01 | 0.805673 | 1.191449e-49 | 6.341718e-47 |
| MsG0380014876.01 | MsG0580029008.01 | 0.807139 | 5.847795e-50 | 3.231813e-47 |
| MsG0380014876.01 | MsG0580029236.01 | 0.819998 | 8.652912e-53 | 6.763665e-50 |
| MsG0380014876.01 | MsG0580029549.01 | 0.806018 | 1.008401e-49 | 5.415154e-47 |
| MsG0380014876.01 | MsG0680030413.01 | 0.801187 | 1.013631e-48 | 4.810169e-46 |
| MsG0380014876.01 | MsG0680030880.01 | 0.812007 | 5.264027e-51 | 3.308198e-48 |
| MsG0380014876.01 | MsG0680030882.01 | 0.813622 | 2.331630e-51 | 1.530300e-48 |
| MsG0380014876.01 | MsG0680031361.01 | 0.808447 | 3.083043e-50 | 1.763319e-47 |
| MsG0380014876.01 | MsG0680031488.01 | 0.844752 | 6.221176e-59 | 1.014380e-55 |
| MsG0380014876.01 | MsG0680031506.01 | 0.817410 | 3.346494e-52 | 2.435272e-49 |
| MsG0380014876.01 | MsG0680032771.01 | 0.824022 | 1.011096e-53 | 8.849983e-51 |
| MsG0380014876.01 | MsG0680032809.01 | 0.835008 | 2.154601e-56 | 2.600979e-53 |
| MsG0380014876.01 | MsG0680034230.01 | 0.801359 | 9.343933e-49 | 4.453550e-46 |
| MsG0380014876.01 | MsG0680035034.01 | 0.811115 | 8.225182e-51 | 5.048264e-48 |
| MsG0380014876.01 | MsG0680035580.01 | 0.821866 | 3.214215e-53 | 2.646869e-50 |
| MsG0380014876.01 | MsG0680035877.01 | 0.802140 | 6.462125e-49 | 3.141462e-46 |
| MsG0380014876.01 | MsG0680035888.01 | 0.819639 | 1.045008e-52 | 8.086714e-50 |
| MsG0380014876.01 | MsG0780036183.01 | 0.805680 | 1.187497e-49 | 6.321966e-47 |
| MsG0380014876.01 | MsG0780036602.01 | 0.803312 | 3.701383e-49 | 1.853968e-46 |
| MsG0380014876.01 | MsG0780036659.01 | 0.801304 | 9.591414e-49 | 4.565082e-46 |
| MsG0380014876.01 | MsG0780036757.01 | 0.802789 | 4.747696e-49 | 2.346665e-46 |
| MsG0380014876.01 | MsG0780037054.01 | 0.806575 | 7.697522e-50 | 4.192544e-47 |
| MsG0380014876.01 | MsG0780037093.01 | 0.804543 | 2.053920e-49 | 1.061848e-46 |
| MsG0380014876.01 | MsG0780037141.01 | 0.805337 | 1.401318e-49 | 7.394471e-47 |
| MsG0380014876.01 | MsG0780037292.01 | 0.817411 | 3.343360e-52 | 2.433117e-49 |
| MsG0380014876.01 | MsG0780038401.01 | 0.809609 | 1.738847e-50 | 1.025646e-47 |
| MsG0380014876.01 | MsG0780038603.01 | 0.820024 | 8.532855e-53 | 6.675170e-50 |
| MsG0380014876.01 | MsG0780039170.01 | 0.816961 | 4.220507e-52 | 3.034044e-49 |
| MsG0380014876.01 | MsG0780039443.01 | 0.844918 | 5.611756e-59 | 9.198109e-56 |
| MsG0380014876.01 | MsG0780039522.01 | 0.807782 | 4.273021e-50 | 2.401367e-47 |
| MsG0380014876.01 | MsG0780040057.01 | 0.817778 | 2.763543e-52 | 2.031466e-49 |
| MsG0380014876.01 | MsG0780040734.01 | 0.815384 | 9.503567e-52 | 6.542622e-49 |
| MsG0380014876.01 | MsG0780040926.01 | 0.802859 | 4.592997e-49 | 2.274148e-46 |
| MsG0380014876.01 | MsG0780041016.01 | 0.808792 | 2.602071e-50 | 1.501587e-47 |
| MsG0380014876.01 | MsG0780041258.01 | 0.804777 | 1.835823e-49 | 9.548977e-47 |
| MsG0380014876.01 | MsG0780041391.01 | 0.836313 | 1.007092e-56 | 1.264592e-53 |
| MsG0380014876.01 | MsG0780041416.01 | 0.838066 | 3.585547e-57 | 4.748234e-54 |
| MsG0380014876.01 | MsG0780041435.01 | 0.868180 | 7.905241e-66 | 2.833403e-62 |
| MsG0380014876.01 | MsG0780041440.01 | 0.828636 | 8.052568e-55 | 8.050099e-52 |
| MsG0380014876.01 | MsG0780041475.01 | 0.800353 | 1.499970e-48 | 6.969328e-46 |
| MsG0380014876.01 | MsG0880042128.01 | 0.838007 | 3.713619e-57 | 4.909478e-54 |
| MsG0380014876.01 | MsG0880042129.01 | 0.808754 | 2.650749e-50 | 1.528187e-47 |
| MsG0380014876.01 | MsG0880042324.01 | 0.816647 | 4.966110e-52 | 3.539032e-49 |
| MsG0380014876.01 | MsG0880042519.01 | 0.813185 | 2.909474e-51 | 1.886816e-48 |
| MsG0380014876.01 | MsG0880042520.01 | 0.826537 | 2.569141e-54 | 2.416108e-51 |
| MsG0380014876.01 | MsG0880042700.01 | 0.819618 | 1.056850e-52 | 8.173181e-50 |
| MsG0380014876.01 | MsG0880043479.01 | 0.831104 | 2.016500e-55 | 2.166634e-52 |
| MsG0380014876.01 | MsG0880043616.01 | 0.811267 | 7.624695e-51 | 4.698392e-48 |
| MsG0380014876.01 | MsG0880044565.01 | 0.800154 | 1.646192e-48 | 7.609857e-46 |
| MsG0380014876.01 | MsG0880044728.01 | 0.838180 | 3.351114e-57 | 4.452822e-54 |
| MsG0380014876.01 | MsG0880045017.01 | 0.804186 | 2.437743e-49 | 1.248756e-46 |
| MsG0380014876.01 | MsG0880045294.01 | 0.847397 | 1.186417e-59 | 2.106041e-56 |
| MsG0380014876.01 | MsG0880045362.01 | 0.812937 | 3.296936e-51 | 2.123916e-48 |
| MsG0380014876.01 | MsG0880045736.01 | 0.803837 | 2.881636e-49 | 1.463043e-46 |
| MsG0380014876.01 | MsG0880045765.01 | 0.820669 | 6.069634e-53 | 4.833096e-50 |
| MsG0380014876.01 | MsG0880046122.01 | 0.822485 | 2.309377e-53 | 1.935592e-50 |
| MsG0380014876.01 | MsG0880046620.01 | 0.810201 | 1.296828e-50 | 7.768244e-48 |
| MsG0380014876.01 | MsG0880047473.01 | 0.811746 | 6.001884e-51 | 3.745470e-48 |
| MsG0380014876.01 | MsG0880047764.01 | 0.815937 | 7.156459e-52 | 5.001812e-49 |
| MsG0280006461.01 | MsG0380014876.01 | 0.811727 | 6.058846e-51 | 3.779236e-48 |
| MsG0280006491.01 | MsG0380014876.01 | 0.821196 | 4.591903e-53 | 3.710953e-50 |
| MsG0280006593.01 | MsG0380014876.01 | 0.817774 | 2.769887e-52 | 2.035894e-49 |
| MsG0280006601.01 | MsG0380014876.01 | 0.817648 | 2.956458e-52 | 2.165466e-49 |
| MsG0280006993.01 | MsG0380014876.01 | 0.801119 | 1.046642e-48 | 4.958445e-46 |
| MsG0280007307.01 | MsG0380014876.01 | 0.810199 | 1.297639e-50 | 7.772834e-48 |
| MsG0280007527.01 | MsG0380014876.01 | 0.826677 | 2.378963e-54 | 2.246297e-51 |
| MsG0280007529.01 | MsG0380014876.01 | 0.800640 | 1.310553e-48 | 6.133749e-46 |
| MsG0280007531.01 | MsG0380014876.01 | 0.803111 | 4.073365e-49 | 2.029769e-46 |
| MsG0280007903.01 | MsG0380014876.01 | 0.801686 | 8.009504e-49 | 3.848950e-46 |
| MsG0280007955.01 | MsG0380014876.01 | 0.837395 | 5.331455e-57 | 6.915779e-54 |
| MsG0280008429.01 | MsG0380014876.01 | 0.815190 | 1.049581e-51 | 7.186911e-49 |
| MsG0280009421.01 | MsG0380014876.01 | 0.809876 | 1.523642e-50 | 9.050060e-48 |
| MsG0280009575.01 | MsG0380014876.01 | 0.830942 | 2.210455e-55 | 2.363724e-52 |
| MsG0280009984.01 | MsG0380014876.01 | 0.808060 | 3.728681e-50 | 2.110810e-47 |
| MsG0280010184.01 | MsG0380014876.01 | 0.831823 | 1.341904e-55 | 1.473111e-52 |
| MsG0280010233.01 | MsG0380014876.01 | 0.807524 | 4.847026e-50 | 2.705786e-47 |
| MsG0280010349.01 | MsG0380014876.01 | 0.806358 | 8.550982e-50 | 4.631653e-47 |
| MsG0280010350.01 | MsG0380014876.01 | 0.808801 | 2.590872e-50 | 1.495460e-47 |
| MsG0280010366.01 | MsG0380014876.01 | 0.836731 | 7.881118e-57 | 1.001975e-53 |
| MsG0280010411.01 | MsG0380014876.01 | 0.808059 | 3.730195e-50 | 2.111619e-47 |
| MsG0280010434.01 | MsG0380014876.01 | 0.804145 | 2.486335e-49 | 1.272347e-46 |
| MsG0280010489.01 | MsG0380014876.01 | 0.804632 | 1.968027e-49 | 1.019779e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014876.01.T01 | MTR_3g465570 | 90.000 | 80 | 7 | 1 | 8 | 87 | 314 | 392 | 2.05e-46 | 152 |
| MsG0380014876.01.T01 | MTR_3g023830 | 38.961 | 77 | 46 | 1 | 15 | 90 | 184 | 260 | 1.55e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014876.01.T01 | AT2G30105 | 64.773 | 88 | 29 | 1 | 7 | 92 | 286 | 373 | 1.02e-33 | 119 |
| MsG0380014876.01.T01 | AT5G07910 | 38.462 | 78 | 47 | 1 | 15 | 91 | 185 | 262 | 4.03e-11 | 57.4 |
Find 15 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATAGTTATTTCTGTATTA+TGG | 0.188941 | 3:-61834420 | None:intergenic |
| GGTCACAAATGTGGAGTATA+AGG | 0.332050 | 3:-61834305 | None:intergenic |
| AACTATTGATATACTTCGTC+AGG | 0.413073 | 3:+61834435 | MsG0380014876.01.T01:CDS |
| TTGCTTGCAGCTTTCCACCT+TGG | 0.442166 | 3:+61834393 | MsG0380014876.01.T01:CDS |
| CTTTGCATCTTAGTAACAAT+GGG | 0.467481 | 3:+61834338 | MsG0380014876.01.T01:CDS |
| CACATTTGTGACCATTATGC+AGG | 0.471749 | 3:+61834315 | MsG0380014876.01.T01:CDS |
| TTTCTTTCAGTTTGAAGGAT+GGG | 0.479136 | 3:+61834561 | MsG0380014876.01.T01:intron |
| AAGATGCAAAGCCTGCATAA+TGG | 0.530896 | 3:-61834326 | None:intergenic |
| TTCTGTATTATGGAGATCCA+AGG | 0.552344 | 3:-61834410 | None:intergenic |
| GTTTCTGATGCTTTGAGCGA+CGG | 0.553617 | 3:-61834600 | None:intergenic |
| GCTTTGCATCTTAGTAACAA+TGG | 0.556237 | 3:+61834337 | MsG0380014876.01.T01:CDS |
| AAACAAATAGAATTCCGAGT+TGG | 0.580256 | 3:+61834619 | MsG0380014876.01.T01:CDS |
| CTGCATAATGGTCACAAATG+TGG | 0.640523 | 3:-61834314 | None:intergenic |
| AATCTCTAGAAACTCCAACT+CGG | 0.645232 | 3:-61834633 | None:intergenic |
| TGTATTATGGAGATCCAAGG+TGG | 0.659626 | 3:-61834407 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATAGTTATTTCTGTATTA+TGG | - | Chr3:61834423-61834442 | None:intergenic | 20.0% |
| !!! | AAGTGTTGCATTTTAATTGA+AGG | + | Chr3:61834492-61834511 | MsG0380014876.01.T01:intron | 25.0% |
| AAACAAATAGAATTCCGAGT+TGG | + | Chr3:61834619-61834638 | MsG0380014876.01.T01:CDS | 30.0% | |
| AACTATTGATATACTTCGTC+AGG | + | Chr3:61834435-61834454 | MsG0380014876.01.T01:CDS | 30.0% | |
| CTTTGCATCTTAGTAACAAT+GGG | + | Chr3:61834338-61834357 | MsG0380014876.01.T01:CDS | 30.0% | |
| GCATGACAGTAAAATATATG+TGG | + | Chr3:61834537-61834556 | MsG0380014876.01.T01:intron | 30.0% | |
| TTTCTTTCAGTTTGAAGGAT+GGG | + | Chr3:61834561-61834580 | MsG0380014876.01.T01:intron | 30.0% | |
| ! | TTTTCTTTCAGTTTGAAGGA+TGG | + | Chr3:61834560-61834579 | MsG0380014876.01.T01:intron | 30.0% |
| !! | GTTTCTAGAGATTTTGATGA+AGG | + | Chr3:61834643-61834662 | MsG0380014876.01.T01:CDS | 30.0% |
| !!! | CAAGTCTTGAATAGTTTTGA+TGG | - | Chr3:61834376-61834395 | None:intergenic | 30.0% |
| GCTTTGCATCTTAGTAACAA+TGG | + | Chr3:61834337-61834356 | MsG0380014876.01.T01:CDS | 35.0% | |
| TTCTGTATTATGGAGATCCA+AGG | - | Chr3:61834413-61834432 | None:intergenic | 35.0% | |
| ! | AATCTCTAGAAACTCCAACT+CGG | - | Chr3:61834636-61834655 | None:intergenic | 35.0% |
| ! | GTGGTTTTCTTTCAGTTTGA+AGG | + | Chr3:61834556-61834575 | MsG0380014876.01.T01:intron | 35.0% |
| AAGATGCAAAGCCTGCATAA+TGG | - | Chr3:61834329-61834348 | None:intergenic | 40.0% | |
| CACATTTGTGACCATTATGC+AGG | + | Chr3:61834315-61834334 | MsG0380014876.01.T01:CDS | 40.0% | |
| CTGCATAATGGTCACAAATG+TGG | - | Chr3:61834317-61834336 | None:intergenic | 40.0% | |
| GGTCACAAATGTGGAGTATA+AGG | - | Chr3:61834308-61834327 | None:intergenic | 40.0% | |
| TGTATTATGGAGATCCAAGG+TGG | - | Chr3:61834410-61834429 | None:intergenic | 40.0% | |
| ! | GTTTCTGATGCTTTGAGCGA+CGG | - | Chr3:61834603-61834622 | None:intergenic | 45.0% |
| TTGCTTGCAGCTTTCCACCT+TGG | + | Chr3:61834393-61834412 | MsG0380014876.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 61834289 | 61834681 | 61834289 | ID=MsG0380014876.01;Name=MsG0380014876.01 |
| Chr3 | mRNA | 61834289 | 61834681 | 61834289 | ID=MsG0380014876.01.T01;Parent=MsG0380014876.01;Name=MsG0380014876.01.T01;_AED=0.50;_eAED=0.54;_QI=0|0|0|1|1|1|2|0|92 |
| Chr3 | exon | 61834289 | 61834456 | 61834289 | ID=MsG0380014876.01.T01:exon:6393;Parent=MsG0380014876.01.T01 |
| Chr3 | exon | 61834571 | 61834681 | 61834571 | ID=MsG0380014876.01.T01:exon:6394;Parent=MsG0380014876.01.T01 |
| Chr3 | CDS | 61834289 | 61834456 | 61834289 | ID=MsG0380014876.01.T01:cds;Parent=MsG0380014876.01.T01 |
| Chr3 | CDS | 61834571 | 61834681 | 61834571 | ID=MsG0380014876.01.T01:cds;Parent=MsG0380014876.01.T01 |
| Gene Sequence |
| Protein sequence |